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| Open reading frame (ORF) annotation in the exon skipping event |
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| Splicing Quantitative Trait Loci (sQTLs) in the skipped exons |
| Splicing Quantitative Trait Methylation (sQTM) in the skipped exon |
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Gene summary for SLC16A9 |
 Gene summary |
| Gene information | Gene symbol | SLC16A9 | Gene ID | 220963 |
| Gene name | solute carrier family 16 member 9 | |
| Synonyms | C10orf36|MCT9 | |
| Cytomap | 10q21.2 | |
| Type of gene | protein-coding | |
| Description | monocarboxylate transporter 9MCT 9monocarboxylic acid transporter 9solute carrier family 16 (monocarboxylic acid transporters), member 9 | |
| Modification date | 20180523 | |
| UniProtAcc | Q7RTY1 | |
| Context | PubMed: SLC16A9 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract] - Title (PMID) |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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Exon skipping events across known transcript of Ensembl for SLC16A9 from UCSC genome browser |
| Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Gene isoform structures and expression levels for SLC16A9 |
| Expression levels of gene isoforms across TCGA. |
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| Expression levels of gene isoforms across GTEx. |
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Exon skipping events with PSIs in TCGA for SLC16A9 |
| Information of exkip skipping event in TCGA. |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_49454 | 10 | 61410522:61412708:61413432:61414347:61423984:61424080 | 61413432:61414347 | ENSG00000165449.7 | ENST00000395348.3,ENST00000395347.1 |
| exon_skip_49466 | 10 | 61414264:61414347:61423984:61424080:61432527:61432671 | 61423984:61424080 | ENSG00000165449.7 | ENST00000395348.3,ENST00000395347.1 |
| exon_skip_49470 | 10 | 61423984:61424080:61432527:61432671:61443853:61444085 | 61432527:61432671 | ENSG00000165449.7 | ENST00000395348.3,ENST00000395347.1 |
| exon_skip_49481 | 10 | 61443855:61444085:61468363:61468541:61469236:61469280 | 61468363:61468541 | ENSG00000165449.7 | ENST00000490066.1 |
| PSI values of skipped exons in TCGA. |
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Exon skipping events with PSIs in GTEx for SLC16A9 |
| Information of exkip skipping event in GTEx |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_49454 | 10 | 61410522:61412708:61413432:61414347:61423984:61424080 | 61413432:61414347 | ENSG00000165449.7 | ENST00000395348.3,ENST00000395347.1 |
| exon_skip_49466 | 10 | 61414264:61414347:61423984:61424080:61432527:61432671 | 61423984:61424080 | ENSG00000165449.7 | ENST00000395348.3,ENST00000395347.1 |
| exon_skip_49470 | 10 | 61423984:61424080:61432527:61432671:61443853:61444085 | 61432527:61432671 | ENSG00000165449.7 | ENST00000395348.3,ENST00000395347.1 |
| exon_skip_49481 | 10 | 61443855:61444085:61468363:61468541:61469236:61469280 | 61468363:61468541 | ENSG00000165449.7 | ENST00000490066.1 |
| PSI values of skipped exons in GTEx. |
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| * Skipped exon sequences. |
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Open reading frame (ORF) annotation in the exon skipping event for SLC16A9 |
| Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000395347 | 61413432 | 61414347 | In-frame |
| ENST00000395348 | 61413432 | 61414347 | In-frame |
| ENST00000395347 | 61423984 | 61424080 | In-frame |
| ENST00000395348 | 61423984 | 61424080 | In-frame |
| ENST00000395347 | 61432527 | 61432671 | In-frame |
| ENST00000395348 | 61432527 | 61432671 | In-frame |
| Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000395347 | 61413432 | 61414347 | In-frame |
| ENST00000395348 | 61413432 | 61414347 | In-frame |
| ENST00000395347 | 61423984 | 61424080 | In-frame |
| ENST00000395348 | 61423984 | 61424080 | In-frame |
| ENST00000395347 | 61432527 | 61432671 | In-frame |
| ENST00000395348 | 61432527 | 61432671 | In-frame |
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Infer the effects of exon skipping event on protein functional features for SLC16A9 |
| Exon skipping at the protein sequence level and followed lost functional features. * Click on the image to enlarge it in a new window. |
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| Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000395347 | 3663 | 509 | 61432527 | 61432671 | 306 | 449 | 65 | 113 |
| ENST00000395348 | 4191 | 509 | 61432527 | 61432671 | 834 | 977 | 65 | 113 |
| ENST00000395347 | 3663 | 509 | 61423984 | 61424080 | 450 | 545 | 113 | 145 |
| ENST00000395348 | 4191 | 509 | 61423984 | 61424080 | 978 | 1073 | 113 | 145 |
| ENST00000395347 | 3663 | 509 | 61413432 | 61414347 | 546 | 1460 | 145 | 450 |
| ENST00000395348 | 4191 | 509 | 61413432 | 61414347 | 1074 | 1988 | 145 | 450 |
| Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000395347 | 3663 | 509 | 61432527 | 61432671 | 306 | 449 | 65 | 113 |
| ENST00000395348 | 4191 | 509 | 61432527 | 61432671 | 834 | 977 | 65 | 113 |
| ENST00000395347 | 3663 | 509 | 61423984 | 61424080 | 450 | 545 | 113 | 145 |
| ENST00000395348 | 4191 | 509 | 61423984 | 61424080 | 978 | 1073 | 113 | 145 |
| ENST00000395347 | 3663 | 509 | 61413432 | 61414347 | 546 | 1460 | 145 | 450 |
| ENST00000395348 | 4191 | 509 | 61413432 | 61414347 | 1074 | 1988 | 145 | 450 |
| Lost protein functional features of individual exon skipping events in TCGA. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| Q7RTY1 | 65 | 113 | 1 | 509 | Chain | ID=PRO_0000289332;Note=Monocarboxylate transporter 9 |
| Q7RTY1 | 65 | 113 | 1 | 509 | Chain | ID=PRO_0000289332;Note=Monocarboxylate transporter 9 |
| Q7RTY1 | 65 | 113 | 53 | 73 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 65 | 113 | 53 | 73 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 65 | 113 | 80 | 100 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 65 | 113 | 80 | 100 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 65 | 113 | 102 | 122 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 65 | 113 | 102 | 122 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 113 | 145 | 1 | 509 | Chain | ID=PRO_0000289332;Note=Monocarboxylate transporter 9 |
| Q7RTY1 | 113 | 145 | 1 | 509 | Chain | ID=PRO_0000289332;Note=Monocarboxylate transporter 9 |
| Q7RTY1 | 113 | 145 | 102 | 122 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 113 | 145 | 102 | 122 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 113 | 145 | 137 | 157 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 113 | 145 | 137 | 157 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 1 | 509 | Chain | ID=PRO_0000289332;Note=Monocarboxylate transporter 9 |
| Q7RTY1 | 145 | 450 | 1 | 509 | Chain | ID=PRO_0000289332;Note=Monocarboxylate transporter 9 |
| Q7RTY1 | 145 | 450 | 203 | 203 | Natural variant | ID=VAR_062149;Note=A->V;Dbxref=dbSNP:rs56370926 |
| Q7RTY1 | 145 | 450 | 203 | 203 | Natural variant | ID=VAR_062149;Note=A->V;Dbxref=dbSNP:rs56370926 |
| Q7RTY1 | 145 | 450 | 258 | 258 | Natural variant | ID=VAR_032619;Note=T->K;Dbxref=dbSNP:rs2242206 |
| Q7RTY1 | 145 | 450 | 258 | 258 | Natural variant | ID=VAR_032619;Note=T->K;Dbxref=dbSNP:rs2242206 |
| Q7RTY1 | 145 | 450 | 137 | 157 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 137 | 157 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 164 | 184 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 164 | 184 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 305 | 325 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 305 | 325 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 342 | 362 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 342 | 362 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 372 | 392 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 372 | 392 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 398 | 418 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 398 | 418 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 433 | 453 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 433 | 453 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Lost protein functional features of individual exon skipping events in GTEx. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| Q7RTY1 | 65 | 113 | 1 | 509 | Chain | ID=PRO_0000289332;Note=Monocarboxylate transporter 9 |
| Q7RTY1 | 65 | 113 | 1 | 509 | Chain | ID=PRO_0000289332;Note=Monocarboxylate transporter 9 |
| Q7RTY1 | 65 | 113 | 53 | 73 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 65 | 113 | 53 | 73 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 65 | 113 | 80 | 100 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 65 | 113 | 80 | 100 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 65 | 113 | 102 | 122 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 65 | 113 | 102 | 122 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 113 | 145 | 1 | 509 | Chain | ID=PRO_0000289332;Note=Monocarboxylate transporter 9 |
| Q7RTY1 | 113 | 145 | 1 | 509 | Chain | ID=PRO_0000289332;Note=Monocarboxylate transporter 9 |
| Q7RTY1 | 113 | 145 | 102 | 122 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 113 | 145 | 102 | 122 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 113 | 145 | 137 | 157 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 113 | 145 | 137 | 157 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 1 | 509 | Chain | ID=PRO_0000289332;Note=Monocarboxylate transporter 9 |
| Q7RTY1 | 145 | 450 | 1 | 509 | Chain | ID=PRO_0000289332;Note=Monocarboxylate transporter 9 |
| Q7RTY1 | 145 | 450 | 203 | 203 | Natural variant | ID=VAR_062149;Note=A->V;Dbxref=dbSNP:rs56370926 |
| Q7RTY1 | 145 | 450 | 203 | 203 | Natural variant | ID=VAR_062149;Note=A->V;Dbxref=dbSNP:rs56370926 |
| Q7RTY1 | 145 | 450 | 258 | 258 | Natural variant | ID=VAR_032619;Note=T->K;Dbxref=dbSNP:rs2242206 |
| Q7RTY1 | 145 | 450 | 258 | 258 | Natural variant | ID=VAR_032619;Note=T->K;Dbxref=dbSNP:rs2242206 |
| Q7RTY1 | 145 | 450 | 137 | 157 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 137 | 157 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 164 | 184 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 164 | 184 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 305 | 325 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 305 | 325 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 342 | 362 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 342 | 362 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 372 | 392 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 372 | 392 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 398 | 418 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 398 | 418 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 433 | 453 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
| Q7RTY1 | 145 | 450 | 433 | 453 | Transmembrane | Note=Helical;Ontology_term=ECO:0000255;evidence=ECO:0000255 |
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SNVs in the skipped exons for SLC16A9 |
| - Lollipop plot for presenting exon skipping associated SNVs. * Click on the image to enlarge it in a new window. |
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| - Differential PSIs between mutated versus non-mutated samples. |
| - Non-synonymous mutations located in the skipped exons in TCGA. |
| Cancer type | Sample | ESID | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_49454 | 61413433 | 61414347 | 61413975 | 61413975 | Frame_Shift_Del | T | - | p.K271fs |
| LIHC | TCGA-DD-A1EG-01 | exon_skip_49454 | 61413433 | 61414347 | 61414017 | 61414017 | Frame_Shift_Del | T | - | p.N256fs |
| LIHC | TCGA-DD-A39Y-01 | exon_skip_49454 | 61413433 | 61414347 | 61414017 | 61414017 | Frame_Shift_Del | T | - | p.N256fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_49454 | 61413433 | 61414347 | 61414073 | 61414073 | Frame_Shift_Del | T | - | p.K237fs |
| COAD | TCGA-F4-6856-01 | exon_skip_49454 | 61413433 | 61414347 | 61414180 | 61414180 | Frame_Shift_Del | T | - | p.I202fs |
| COAD | TCGA-AA-A00A-01 | exon_skip_49470 | 61432528 | 61432671 | 61432545 | 61432546 | Frame_Shift_Ins | - | A | p.S108fs |
| UCEC | TCGA-D1-A17Q-01 | exon_skip_49454 | 61413433 | 61414347 | 61413680 | 61413680 | Nonsense_Mutation | C | T | p.W368* |
| LGG | TCGA-DU-6392-01 | exon_skip_49454 | 61413433 | 61414347 | 61413994 | 61413994 | Nonsense_Mutation | C | A | p.E264* |
| UCEC | TCGA-B5-A0JY-01 | exon_skip_49454 | 61413433 | 61414347 | 61414117 | 61414117 | Nonsense_Mutation | C | A | p.E223* |
| HNSC | TCGA-D6-A6EQ-01 | exon_skip_49454 | 61413433 | 61414347 | 61414210 | 61414210 | Nonsense_Mutation | G | A | p.Q192* |
| SKCM | TCGA-YD-A89C-06 | exon_skip_49454 | 61413433 | 61414347 | 61414210 | 61414210 | Nonsense_Mutation | G | A | p.Q192* |
| STAD | TCGA-CD-8525-01 | exon_skip_49470 | 61432528 | 61432671 | 61432672 | 61432672 | Splice_Site | C | A | . |
| STAD | TCGA-CD-8525-01 | exon_skip_49470 | 61432528 | 61432671 | 61432672 | 61432672 | Splice_Site | C | A | p.S66_splice |
| - Depth of coverage in the three exons composing exon skipping event |
| Depth of coverage in three exons | Mutation description |
| - Non-synonymous mutations located in the skipped exons in CCLE. |
| Sample | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| HCC515_LUNG | 61413433 | 61414347 | 61414179 | 61414179 | Frame_Shift_Del | A | - | p.I202fs |
| HEC59_ENDOMETRIUM | 61413433 | 61414347 | 61414180 | 61414180 | Frame_Shift_Del | T | - | p.I202fs |
| CCK81_LARGE_INTESTINE | 61432528 | 61432671 | 61432545 | 61432546 | Frame_Shift_Ins | - | A | p.S108fs |
| PATU8988T_PANCREAS | 61413433 | 61414347 | 61413486 | 61413486 | Missense_Mutation | C | A | p.G433V |
| SNU1040_LARGE_INTESTINE | 61413433 | 61414347 | 61413525 | 61413525 | Missense_Mutation | G | A | p.T420M |
| M07E_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 61413433 | 61414347 | 61413564 | 61413564 | Missense_Mutation | A | C | p.F407C |
| SW13_ADRENAL_CORTEX | 61413433 | 61414347 | 61413612 | 61413612 | Missense_Mutation | A | C | p.F391C |
| RMUGS_OVARY | 61413433 | 61414347 | 61413736 | 61413736 | Missense_Mutation | C | T | p.G350S |
| GP2D_LARGE_INTESTINE | 61413433 | 61414347 | 61413748 | 61413748 | Missense_Mutation | T | G | p.I346L |
| 786O_KIDNEY | 61413433 | 61414347 | 61413964 | 61413964 | Missense_Mutation | C | T | p.E274K |
| NB1_AUTONOMIC_GANGLIA | 61413433 | 61414347 | 61413991 | 61413991 | Missense_Mutation | G | C | p.P265A |
| A2780_OVARY | 61413433 | 61414347 | 61414017 | 61414017 | Missense_Mutation | T | A | p.N256I |
| NCIH1339_LUNG | 61413433 | 61414347 | 61414106 | 61414106 | Missense_Mutation | G | T | p.N226K |
| MM426_SKIN | 61413433 | 61414347 | 61414278 | 61414278 | Missense_Mutation | C | T | p.G169E |
| NCIH2170_LUNG | 61413433 | 61414347 | 61414309 | 61414309 | Missense_Mutation | T | C | p.R159G |
| PF382_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 61423985 | 61424080 | 61424005 | 61424005 | Missense_Mutation | G | A | p.A139V |
| PWR1E_PROSTATE | 61423985 | 61424080 | 61424042 | 61424042 | Missense_Mutation | T | C | p.I127V |
| CW2_LARGE_INTESTINE | 61423985 | 61424080 | 61424054 | 61424054 | Missense_Mutation | C | T | p.A123T |
| BT549_BREAST | 61432528 | 61432671 | 61432621 | 61432621 | Missense_Mutation | T | C | p.I83V |
| U87MG_CENTRAL_NERVOUS_SYSTEM | 61432528 | 61432671 | 61432626 | 61432626 | Missense_Mutation | A | T | p.V81D |
| JHUEM7_ENDOMETRIUM | 61413433 | 61414347 | 61413648 | 61413648 | Nonsense_Mutation | A | C | p.L379* |
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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for SLC16A9 |
| sQTL information located at the skipped exons. |
| Exon skip ID | Chromosome | Three exons | Skippped exon | ENST | Cancer type | SNP id | Location | DNA change (ref/var) | P-value |
| exon_skip_49454 | 10 | 61410522:61412708:61413432:61414347:61423984:61424080 | 61413432:61414347 | ENST00000395348.3,ENST00000395347.1 | LGG | rs2242206 | chr10:61414011 | G/T | 3.96e-08 |
| exon_skip_49454 | 10 | 61410522:61412708:61413432:61414347:61423984:61424080 | 61413432:61414347 | ENST00000395348.3,ENST00000395347.1 | LGG | rs2242206 | chr10:61414011 | G/T | 3.52e-04 |
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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for SLC16A9 |
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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for SLC16A9 |
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RelatedDrugs for SLC16A9 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SLC16A9 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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