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| Open reading frame (ORF) annotation in the exon skipping event |
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| Splicing Quantitative Trait Loci (sQTLs) in the skipped exons |
| Splicing Quantitative Trait Methylation (sQTM) in the skipped exon |
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Gene summary for CUX1 |
 Gene summary |
| Gene information | Gene symbol | CUX1 | Gene ID | 1523 |
| Gene name | cut like homeobox 1 | |
| Synonyms | CASP|CDP|CDP/Cut|CDP1|COY1|CUTL1|CUX|Clox|Cux/CDP|GOLIM6|Nbla10317|p100|p110|p200|p75 | |
| Cytomap | 7q22.1 | |
| Type of gene | protein-coding | |
| Description | protein CASPCCAAT displacement proteincut homologgolgi integral membrane protein 6homeobox protein cux-1putative protein product of Nbla10317 | |
| Modification date | 20180523 | |
| UniProtAcc | Q13948 | |
| Context | PubMed: CUX1 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract] - Title (PMID) |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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Exon skipping events across known transcript of Ensembl for CUX1 from UCSC genome browser |
| Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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Gene isoform structures and expression levels for CUX1 |
| Expression levels of gene isoforms across TCGA. |
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| Expression levels of gene isoforms across GTEx. |
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Exon skipping events with PSIs in TCGA for CUX1 |
| Information of exkip skipping event in TCGA. |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_470002 | 7 | 101459300:101459373:101559394:101559505:101671377:101671425 | 101559394:101559505 | ENSG00000257923.5 | ENST00000292538.4,ENST00000497815.1,ENST00000360264.3,ENST00000425244.2 |
| exon_skip_470004 | 7 | 101460919:101460949:101559394:101559505:101671377:101671425 | 101559394:101559505 | ENSG00000257923.5 | ENST00000546411.2,ENST00000549414.2,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7 |
| exon_skip_470005 | 7 | 101559394:101559505:101671377:101671425:101713618:101713697 | 101671377:101671425 | ENSG00000257923.5 | ENST00000560541.1,ENST00000546411.2,ENST00000437600.4,ENST00000292538.4,ENST00000558469.1,ENST00000497815.1,ENST00000549414.2,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENST00000425244.2 |
| exon_skip_470008 | 7 | 101671377:101671425:101713618:101713697:101740643:101740781 | 101713618:101713697 | ENSG00000257923.5 | ENST00000560541.1,ENST00000546411.2,ENST00000437600.4,ENST00000292538.4,ENST00000558469.1,ENST00000497815.1,ENST00000549414.2,ENST00000558836.1,ENST00000606749.1,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENST00000393824.3 |
| exon_skip_470010 | 7 | 101713618:101713697:101740643:101740781:101747615:101747739 | 101740643:101740781 | ENSG00000257923.5 | ENST00000560541.1,ENST00000546411.2,ENST00000547394.2,ENST00000437600.4,ENST00000292538.4,ENST00000558469.1,ENST00000497815.1,ENST00000549414.2,ENST00000558836.1,ENST00000606749.1,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENS |
| exon_skip_470012 | 7 | 101740643:101740781:101747615:101747739:101754977:101755006 | 101747615:101747739 | ENSG00000257923.5 | ENST00000560541.1,ENST00000546411.2,ENST00000547394.2,ENST00000437600.4,ENST00000292538.4,ENST00000558469.1,ENST00000497815.1,ENST00000549414.2,ENST00000558836.1,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENST00000393824.3 |
| exon_skip_470014 | 7 | 101747716:101747739:101754977:101755054:101758486:101758553 | 101754977:101755054 | ENSG00000257923.5 | ENST00000560541.1,ENST00000546411.2,ENST00000547394.2,ENST00000437600.4,ENST00000292538.4,ENST00000549414.2,ENST00000558836.1,ENST00000465461.2,ENST00000360264.3,ENST00000556210.1,ENST00000485792.1,ENST00000550008.2,ENST00000292535.7,ENST00000425244.2,ENS |
| exon_skip_470016 | 7 | 101754977:101755054:101758486:101758553:101801839:101801888 | 101758486:101758553 | ENSG00000257923.5 | ENST00000560541.1,ENST00000546411.2,ENST00000547394.2,ENST00000437600.4,ENST00000292538.4,ENST00000549414.2,ENST00000558836.1,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENST00000425244.2,ENST00000393824.3 |
| exon_skip_470017 | 7 | 101758486:101758553:101801839:101801888:101813725:101813830 | 101801839:101801888 | ENSG00000257923.5 | ENST00000560541.1,ENST00000546411.2,ENST00000547394.2,ENST00000437600.4,ENST00000292538.4,ENST00000549414.2,ENST00000558836.1,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENST00000425244.2,ENST00000393824.3 |
| exon_skip_470020 | 7 | 101801839:101801888:101813725:101813830:101821748:101821937 | 101813725:101813830 | ENSG00000257923.5 | ENST00000560541.1,ENST00000546411.2,ENST00000547394.2,ENST00000292538.4,ENST00000549414.2,ENST00000558836.1,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENST00000425244.2 |
| exon_skip_470022 | 7 | 101813725:101813830:101821748:101821937:101833092:101833151 | 101821748:101821937 | ENSG00000257923.5 | ENST00000560541.1,ENST00000546411.2,ENST00000547394.2,ENST00000292538.4,ENST00000549414.2,ENST00000558836.1,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENST00000425244.2 |
| exon_skip_470024 | 7 | 101813725:101813830:101821754:101821937:101833092:101833151 | 101821754:101821937 | ENSG00000257923.5 | ENST00000437600.4,ENST00000393824.3 |
| exon_skip_470025 | 7 | 101821754:101821937:101833092:101833151:101837121:101837170 | 101833092:101833151 | ENSG00000257923.5 | ENST00000560541.1,ENST00000546411.2,ENST00000547394.2,ENST00000437600.4,ENST00000292538.4,ENST00000549414.2,ENST00000558836.1,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENST00000425244.2,ENST00000393824.3 |
| exon_skip_470028 | 7 | 101833092:101833151:101837121:101837170:101838786:101838883 | 101837121:101837170 | ENSG00000257923.5 | ENST00000560541.1,ENST00000546411.2,ENST00000547394.2,ENST00000437600.4,ENST00000292538.4,ENST00000549414.2,ENST00000558836.1,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENST00000425244.2,ENST00000393824.3 |
| exon_skip_470029 | 7 | 101840219:101840585:101842081:101842147:101843350:101843452 | 101842081:101842147 | ENSG00000257923.5 | ENST00000546411.2,ENST00000360264.3,ENST00000292535.7 |
| exon_skip_470031 | 7 | 101840219:101840585:101843350:101843452:101844639:101845484 | 101843350:101843452 | ENSG00000257923.5 | ENST00000549414.2 |
| exon_skip_470033 | 7 | 101848393:101848450:101870646:101870949:101877331:101877520 | 101870646:101870949 | ENSG00000257923.5 | ENST00000546411.2,ENST00000549414.2,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7 |
| exon_skip_470035 | 7 | 101917514:101917581:101918517:101918630:101921219:101921336 | 101918517:101918630 | ENSG00000257923.5 | ENST00000560541.1,ENST00000547394.2,ENST00000437600.4,ENST00000487284.1,ENST00000292538.4,ENST00000558836.1,ENST00000425244.2,ENST00000393824.3 |
| exon_skip_470042 | 7 | 101918587:101918630:101921219:101921336:101923328:101923412 | 101921219:101921336 | ENSG00000257923.5 | ENST00000560541.1,ENST00000547394.2,ENST00000437600.4,ENST00000487284.1,ENST00000292538.4,ENST00000558836.1,ENST00000425244.2,ENST00000393824.3 |
| exon_skip_470045 | 7 | 101923328:101923412:101924095:101924152:101925131:101925212 | 101924095:101924152 | ENSG00000257923.5 | ENST00000560541.1,ENST00000547394.2,ENST00000437600.4,ENST00000487284.1,ENST00000292538.4,ENST00000558836.1,ENST00000425244.2,ENST00000393824.3 |
| exon_skip_470047 | 7 | 101925131:101925212:101926003:101926068:101926312:101926770 | 101926003:101926068 | ENSG00000257923.5 | ENST00000560541.1,ENST00000547394.2,ENST00000437600.4,ENST00000487284.1,ENST00000292538.4,ENST00000558836.1,ENST00000425244.2,ENST00000393824.3 |
| PSI values of skipped exons in TCGA. |
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Exon skipping events with PSIs in GTEx for CUX1 |
| Information of exkip skipping event in GTEx |
| Exon skip ID | chr | Exons involved in exon skipping | Skipped exon | ENSG | ENSTs |
| exon_skip_470002 | 7 | 101459300:101459373:101559394:101559505:101671377:101671425 | 101559394:101559505 | ENSG00000257923.5 | ENST00000497815.1,ENST00000292538.4,ENST00000360264.3,ENST00000425244.2 |
| exon_skip_470004 | 7 | 101460919:101460949:101559394:101559505:101671377:101671425 | 101559394:101559505 | ENSG00000257923.5 | ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1 |
| exon_skip_470005 | 7 | 101559394:101559505:101671377:101671425:101713618:101713697 | 101671377:101671425 | ENSG00000257923.5 | ENST00000437600.4,ENST00000497815.1,ENST00000292538.4,ENST00000360264.3,ENST00000425244.2,ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1,ENST00000558469.1,ENST00000560541.1 |
| exon_skip_470008 | 7 | 101671377:101671425:101713618:101713697:101740643:101740781 | 101713618:101713697 | ENSG00000257923.5 | ENST00000437600.4,ENST00000497815.1,ENST00000292538.4,ENST00000393824.3,ENST00000360264.3,ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1,ENST00000558469.1,ENST00000560541.1,ENST00000558836.1,ENST00000606749.1 |
| exon_skip_470010 | 7 | 101713618:101713697:101740643:101740781:101747615:101747739 | 101740643:101740781 | ENSG00000257923.5 | ENST00000437600.4,ENST00000497815.1,ENST00000292538.4,ENST00000393824.3,ENST00000547394.2,ENST00000360264.3,ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1,ENST00000558469.1,ENST00000560541.1,ENST00000558836.1,ENS |
| exon_skip_470012 | 7 | 101740643:101740781:101747615:101747739:101754977:101755006 | 101747615:101747739 | ENSG00000257923.5 | ENST00000437600.4,ENST00000497815.1,ENST00000292538.4,ENST00000393824.3,ENST00000547394.2,ENST00000360264.3,ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1,ENST00000558469.1,ENST00000560541.1,ENST00000558836.1 |
| exon_skip_470014 | 7 | 101747716:101747739:101754977:101755054:101758486:101758553 | 101754977:101755054 | ENSG00000257923.5 | ENST00000437600.4,ENST00000292538.4,ENST00000393824.3,ENST00000547394.2,ENST00000360264.3,ENST00000425244.2,ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1,ENST00000560541.1,ENST00000558836.1,ENST00000465461.2,ENS |
| exon_skip_470016 | 7 | 101754977:101755054:101758486:101758553:101801839:101801888 | 101758486:101758553 | ENSG00000257923.5 | ENST00000437600.4,ENST00000292538.4,ENST00000393824.3,ENST00000547394.2,ENST00000360264.3,ENST00000425244.2,ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1,ENST00000560541.1,ENST00000558836.1 |
| exon_skip_470017 | 7 | 101758486:101758553:101801839:101801888:101813725:101813830 | 101801839:101801888 | ENSG00000257923.5 | ENST00000437600.4,ENST00000292538.4,ENST00000393824.3,ENST00000547394.2,ENST00000360264.3,ENST00000425244.2,ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1,ENST00000560541.1,ENST00000558836.1 |
| exon_skip_470020 | 7 | 101801839:101801888:101813725:101813830:101821748:101821937 | 101813725:101813830 | ENSG00000257923.5 | ENST00000292538.4,ENST00000547394.2,ENST00000360264.3,ENST00000425244.2,ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1,ENST00000560541.1,ENST00000558836.1 |
| exon_skip_470022 | 7 | 101813725:101813830:101821748:101821937:101833092:101833151 | 101821748:101821937 | ENSG00000257923.5 | ENST00000292538.4,ENST00000547394.2,ENST00000360264.3,ENST00000425244.2,ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1,ENST00000560541.1,ENST00000558836.1 |
| exon_skip_470024 | 7 | 101813725:101813830:101821754:101821937:101833092:101833151 | 101821754:101821937 | ENSG00000257923.5 | ENST00000437600.4,ENST00000393824.3 |
| exon_skip_470025 | 7 | 101821754:101821937:101833092:101833151:101837121:101837170 | 101833092:101833151 | ENSG00000257923.5 | ENST00000437600.4,ENST00000292538.4,ENST00000393824.3,ENST00000547394.2,ENST00000360264.3,ENST00000425244.2,ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1,ENST00000560541.1,ENST00000558836.1 |
| exon_skip_470028 | 7 | 101833092:101833151:101837121:101837170:101838786:101838883 | 101837121:101837170 | ENSG00000257923.5 | ENST00000437600.4,ENST00000292538.4,ENST00000393824.3,ENST00000547394.2,ENST00000360264.3,ENST00000425244.2,ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1,ENST00000560541.1,ENST00000558836.1 |
| exon_skip_470029 | 7 | 101840219:101840585:101842081:101842147:101843350:101843452 | 101842081:101842147 | ENSG00000257923.5 | ENST00000360264.3,ENST00000292535.7,ENST00000546411.2 |
| exon_skip_470031 | 7 | 101840219:101840585:101843350:101843452:101844639:101845484 | 101843350:101843452 | ENSG00000257923.5 | ENST00000549414.2 |
| exon_skip_470033 | 7 | 101848393:101848450:101870646:101870949:101877331:101877520 | 101870646:101870949 | ENSG00000257923.5 | ENST00000360264.3,ENST00000292535.7,ENST00000549414.2,ENST00000550008.2,ENST00000546411.2,ENST00000556210.1 |
| exon_skip_470042 | 7 | 101918587:101918630:101921219:101921336:101923328:101923412 | 101921219:101921336 | ENSG00000257923.5 | ENST00000437600.4,ENST00000292538.4,ENST00000393824.3,ENST00000547394.2,ENST00000425244.2,ENST00000560541.1,ENST00000558836.1,ENST00000487284.1 |
| exon_skip_470045 | 7 | 101923328:101923412:101924095:101924152:101925131:101925212 | 101924095:101924152 | ENSG00000257923.5 | ENST00000437600.4,ENST00000292538.4,ENST00000393824.3,ENST00000547394.2,ENST00000425244.2,ENST00000560541.1,ENST00000558836.1,ENST00000487284.1 |
| exon_skip_470047 | 7 | 101925131:101925212:101926003:101926068:101926312:101926770 | 101926003:101926068 | ENSG00000257923.5 | ENST00000437600.4,ENST00000292538.4,ENST00000393824.3,ENST00000547394.2,ENST00000425244.2,ENST00000560541.1,ENST00000558836.1,ENST00000487284.1 |
| PSI values of skipped exons in GTEx. |
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| * Skipped exon sequences. |
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Open reading frame (ORF) annotation in the exon skipping event for CUX1 |
| Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000292538 | 101713618 | 101713697 | Frame-shift |
| ENST00000292535 | 101713618 | 101713697 | Frame-shift |
| ENST00000546411 | 101713618 | 101713697 | Frame-shift |
| ENST00000292538 | 101747615 | 101747739 | Frame-shift |
| ENST00000292535 | 101747615 | 101747739 | Frame-shift |
| ENST00000546411 | 101747615 | 101747739 | Frame-shift |
| ENST00000292538 | 101754977 | 101755054 | Frame-shift |
| ENST00000292535 | 101754977 | 101755054 | Frame-shift |
| ENST00000546411 | 101754977 | 101755054 | Frame-shift |
| ENST00000292538 | 101758486 | 101758553 | Frame-shift |
| ENST00000292535 | 101758486 | 101758553 | Frame-shift |
| ENST00000546411 | 101758486 | 101758553 | Frame-shift |
| ENST00000292538 | 101801839 | 101801888 | Frame-shift |
| ENST00000292535 | 101801839 | 101801888 | Frame-shift |
| ENST00000546411 | 101801839 | 101801888 | Frame-shift |
| ENST00000292538 | 101833092 | 101833151 | Frame-shift |
| ENST00000292535 | 101833092 | 101833151 | Frame-shift |
| ENST00000546411 | 101833092 | 101833151 | Frame-shift |
| ENST00000292538 | 101837121 | 101837170 | Frame-shift |
| ENST00000292535 | 101837121 | 101837170 | Frame-shift |
| ENST00000546411 | 101837121 | 101837170 | Frame-shift |
| ENST00000292538 | 101918517 | 101918630 | Frame-shift |
| ENST00000292538 | 101926003 | 101926068 | Frame-shift |
| ENST00000292538 | 101559394 | 101559505 | In-frame |
| ENST00000292535 | 101559394 | 101559505 | In-frame |
| ENST00000546411 | 101559394 | 101559505 | In-frame |
| ENST00000292538 | 101671377 | 101671425 | In-frame |
| ENST00000292535 | 101671377 | 101671425 | In-frame |
| ENST00000546411 | 101671377 | 101671425 | In-frame |
| ENST00000292538 | 101740643 | 101740781 | In-frame |
| ENST00000292535 | 101740643 | 101740781 | In-frame |
| ENST00000546411 | 101740643 | 101740781 | In-frame |
| ENST00000292538 | 101813725 | 101813830 | In-frame |
| ENST00000292535 | 101813725 | 101813830 | In-frame |
| ENST00000546411 | 101813725 | 101813830 | In-frame |
| ENST00000292538 | 101821748 | 101821937 | In-frame |
| ENST00000292535 | 101821748 | 101821937 | In-frame |
| ENST00000546411 | 101821748 | 101821937 | In-frame |
| ENST00000292535 | 101842081 | 101842147 | In-frame |
| ENST00000546411 | 101842081 | 101842147 | In-frame |
| ENST00000292535 | 101870646 | 101870949 | In-frame |
| ENST00000546411 | 101870646 | 101870949 | In-frame |
| ENST00000292538 | 101921219 | 101921336 | In-frame |
| ENST00000292538 | 101924095 | 101924152 | In-frame |
| Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms. |
| ENST | Start of skipped exon | End of skipped exon | ORF |
| ENST00000292538 | 101713618 | 101713697 | Frame-shift |
| ENST00000292535 | 101713618 | 101713697 | Frame-shift |
| ENST00000546411 | 101713618 | 101713697 | Frame-shift |
| ENST00000292538 | 101747615 | 101747739 | Frame-shift |
| ENST00000292535 | 101747615 | 101747739 | Frame-shift |
| ENST00000546411 | 101747615 | 101747739 | Frame-shift |
| ENST00000292538 | 101754977 | 101755054 | Frame-shift |
| ENST00000292535 | 101754977 | 101755054 | Frame-shift |
| ENST00000546411 | 101754977 | 101755054 | Frame-shift |
| ENST00000292538 | 101758486 | 101758553 | Frame-shift |
| ENST00000292535 | 101758486 | 101758553 | Frame-shift |
| ENST00000546411 | 101758486 | 101758553 | Frame-shift |
| ENST00000292538 | 101801839 | 101801888 | Frame-shift |
| ENST00000292535 | 101801839 | 101801888 | Frame-shift |
| ENST00000546411 | 101801839 | 101801888 | Frame-shift |
| ENST00000292538 | 101833092 | 101833151 | Frame-shift |
| ENST00000292535 | 101833092 | 101833151 | Frame-shift |
| ENST00000546411 | 101833092 | 101833151 | Frame-shift |
| ENST00000292538 | 101837121 | 101837170 | Frame-shift |
| ENST00000292535 | 101837121 | 101837170 | Frame-shift |
| ENST00000546411 | 101837121 | 101837170 | Frame-shift |
| ENST00000292538 | 101926003 | 101926068 | Frame-shift |
| ENST00000292538 | 101559394 | 101559505 | In-frame |
| ENST00000292535 | 101559394 | 101559505 | In-frame |
| ENST00000546411 | 101559394 | 101559505 | In-frame |
| ENST00000292538 | 101671377 | 101671425 | In-frame |
| ENST00000292535 | 101671377 | 101671425 | In-frame |
| ENST00000546411 | 101671377 | 101671425 | In-frame |
| ENST00000292538 | 101740643 | 101740781 | In-frame |
| ENST00000292535 | 101740643 | 101740781 | In-frame |
| ENST00000546411 | 101740643 | 101740781 | In-frame |
| ENST00000292538 | 101813725 | 101813830 | In-frame |
| ENST00000292535 | 101813725 | 101813830 | In-frame |
| ENST00000546411 | 101813725 | 101813830 | In-frame |
| ENST00000292538 | 101821748 | 101821937 | In-frame |
| ENST00000292535 | 101821748 | 101821937 | In-frame |
| ENST00000546411 | 101821748 | 101821937 | In-frame |
| ENST00000292535 | 101842081 | 101842147 | In-frame |
| ENST00000546411 | 101842081 | 101842147 | In-frame |
| ENST00000292535 | 101870646 | 101870949 | In-frame |
| ENST00000546411 | 101870646 | 101870949 | In-frame |
| ENST00000292538 | 101921219 | 101921336 | In-frame |
| ENST00000292538 | 101924095 | 101924152 | In-frame |
Top |
Infer the effects of exon skipping event on protein functional features for CUX1 |
| Exon skipping at the protein sequence level and followed lost functional features. * Click on the image to enlarge it in a new window. |
 |
| Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000292535 | 13764 | 1505 | 101559394 | 101559505 | 69 | 179 | 10 | 47 |
| ENST00000546411 | 4229 | 1505 | 101559394 | 101559505 | 31 | 141 | 10 | 47 |
| ENST00000292538 | 2947 | 1505 | 101559394 | 101559505 | 90 | 200 | 21 | 58 |
| ENST00000292535 | 13764 | 1505 | 101671377 | 101671425 | 180 | 227 | 47 | 63 |
| ENST00000546411 | 4229 | 1505 | 101671377 | 101671425 | 142 | 189 | 47 | 63 |
| ENST00000292538 | 2947 | 1505 | 101671377 | 101671425 | 201 | 248 | 58 | 74 |
| ENST00000292535 | 13764 | 1505 | 101740643 | 101740781 | 307 | 444 | 89 | 135 |
| ENST00000546411 | 4229 | 1505 | 101740643 | 101740781 | 269 | 406 | 89 | 135 |
| ENST00000292538 | 2947 | 1505 | 101740643 | 101740781 | 328 | 465 | 100 | 146 |
| ENST00000292535 | 13764 | 1505 | 101813725 | 101813830 | 762 | 866 | 241 | 276 |
| ENST00000546411 | 4229 | 1505 | 101813725 | 101813830 | 724 | 828 | 241 | 276 |
| ENST00000292538 | 2947 | 1505 | 101813725 | 101813830 | 783 | 887 | 252 | 287 |
| ENST00000292535 | 13764 | 1505 | 101821748 | 101821937 | 867 | 1055 | 276 | 339 |
| ENST00000546411 | 4229 | 1505 | 101821748 | 101821937 | 829 | 1017 | 276 | 339 |
| ENST00000292538 | 2947 | 1505 | 101821748 | 101821937 | 888 | 1076 | 287 | 350 |
| ENST00000292538 | 2947 | 1505 | 101921219 | 101921336 | 1590 | 1706 | 521 | 560 |
| ENST00000546411 | 4229 | 1505 | 101842081 | 101842147 | 1589 | 1654 | 529 | 551 |
| ENST00000292538 | 2947 | 1505 | 101924095 | 101924152 | 1791 | 1847 | 588 | 607 |
| ENST00000292535 | 13764 | 1505 | 101842081 | 101842147 | 1933 | 1998 | 631 | 653 |
| ENST00000546411 | 4229 | 1505 | 101870646 | 101870949 | 2825 | 3127 | 941 | 1042 |
| ENST00000292535 | 13764 | 1505 | 101870646 | 101870949 | 3169 | 3471 | 1043 | 1144 |
| Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases. |
| ENST | Length of mRNA | Length of AA seq. | Genomic start | Genomic end | mRNA start | mRNA end | AA start | AA end |
| ENST00000292535 | 13764 | 1505 | 101559394 | 101559505 | 69 | 179 | 10 | 47 |
| ENST00000546411 | 4229 | 1505 | 101559394 | 101559505 | 31 | 141 | 10 | 47 |
| ENST00000292538 | 2947 | 1505 | 101559394 | 101559505 | 90 | 200 | 21 | 58 |
| ENST00000292535 | 13764 | 1505 | 101671377 | 101671425 | 180 | 227 | 47 | 63 |
| ENST00000546411 | 4229 | 1505 | 101671377 | 101671425 | 142 | 189 | 47 | 63 |
| ENST00000292538 | 2947 | 1505 | 101671377 | 101671425 | 201 | 248 | 58 | 74 |
| ENST00000292535 | 13764 | 1505 | 101740643 | 101740781 | 307 | 444 | 89 | 135 |
| ENST00000546411 | 4229 | 1505 | 101740643 | 101740781 | 269 | 406 | 89 | 135 |
| ENST00000292538 | 2947 | 1505 | 101740643 | 101740781 | 328 | 465 | 100 | 146 |
| ENST00000292535 | 13764 | 1505 | 101813725 | 101813830 | 762 | 866 | 241 | 276 |
| ENST00000546411 | 4229 | 1505 | 101813725 | 101813830 | 724 | 828 | 241 | 276 |
| ENST00000292538 | 2947 | 1505 | 101813725 | 101813830 | 783 | 887 | 252 | 287 |
| ENST00000292535 | 13764 | 1505 | 101821748 | 101821937 | 867 | 1055 | 276 | 339 |
| ENST00000546411 | 4229 | 1505 | 101821748 | 101821937 | 829 | 1017 | 276 | 339 |
| ENST00000292538 | 2947 | 1505 | 101821748 | 101821937 | 888 | 1076 | 287 | 350 |
| ENST00000292538 | 2947 | 1505 | 101921219 | 101921336 | 1590 | 1706 | 521 | 560 |
| ENST00000546411 | 4229 | 1505 | 101842081 | 101842147 | 1589 | 1654 | 529 | 551 |
| ENST00000292538 | 2947 | 1505 | 101924095 | 101924152 | 1791 | 1847 | 588 | 607 |
| ENST00000292535 | 13764 | 1505 | 101842081 | 101842147 | 1933 | 1998 | 631 | 653 |
| ENST00000546411 | 4229 | 1505 | 101870646 | 101870949 | 2825 | 3127 | 941 | 1042 |
| ENST00000292535 | 13764 | 1505 | 101870646 | 101870949 | 3169 | 3471 | 1043 | 1144 |
| Lost protein functional features of individual exon skipping events in TCGA. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
| Lost protein functional features of individual exon skipping events in GTEx. |
| UniProt acc. | Start of exon skipping (AA) | End of exon skipping (AA) | Protein feature start (AA) | Protein feature end (AA) | Category of protein feature | Description of feature |
Top |
SNVs in the skipped exons for CUX1 |
| - Lollipop plot for presenting exon skipping associated SNVs. * Click on the image to enlarge it in a new window. |
 |
| - Differential PSIs between mutated versus non-mutated samples. |
| - Non-synonymous mutations located in the skipped exons in TCGA. |
| Cancer type | Sample | ESID | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_470004 exon_skip_470002 | 101559395 | 101559505 | 101559430 | 101559430 | Frame_Shift_Del | C | - | p.N33fs |
| LIHC | TCGA-DD-A39Y-01 | exon_skip_470005 | 101671378 | 101671425 | 101671418 | 101671418 | Frame_Shift_Del | A | - | p.Q72fs |
| LIHC | TCGA-DD-A39Y-01 | exon_skip_470010 | 101740644 | 101740781 | 101740758 | 101740758 | Frame_Shift_Del | A | - | p.E139fs |
| LIHC | TCGA-DD-A1EG-01 | exon_skip_470029 | 101842082 | 101842147 | 101842111 | 101842111 | Frame_Shift_Del | T | - | p.F653fs |
| LIHC | TCGA-G3-A3CJ-01 | exon_skip_470031 | 101843351 | 101843452 | 101843412 | 101843412 | Frame_Shift_Del | C | - | p.I685fs |
| COAD | TCGA-A6-5665-01 | exon_skip_470033 | 101870647 | 101870949 | 101870751 | 101870751 | Frame_Shift_Del | C | - | p.C1089fs |
| COAD | TCGA-AZ-6598-01 | exon_skip_470033 | 101870647 | 101870949 | 101870751 | 101870751 | Frame_Shift_Del | C | - | p.C1089fs |
| STAD | TCGA-HU-A4G8-01 | exon_skip_470033 | 101870647 | 101870949 | 101870751 | 101870751 | Frame_Shift_Del | C | - | p.C1089fs |
| HNSC | TCGA-CV-5978-01 | exon_skip_470012 | 101747616 | 101747739 | 101747722 | 101747723 | Frame_Shift_Ins | - | T | p.C183fs |
| HNSC | TCGA-CV-5978-01 | exon_skip_470012 | 101747616 | 101747739 | 101747722 | 101747723 | Frame_Shift_Ins | - | T | p.D171fs |
| STAD | TCGA-BR-8591-01 | exon_skip_470033 | 101870647 | 101870949 | 101870783 | 101870784 | Frame_Shift_Ins | - | C | p.P1100fs |
| STAD | TCGA-BR-8591-01 | exon_skip_470033 | 101870647 | 101870949 | 101870784 | 101870785 | Frame_Shift_Ins | - | C | p.P1100fs |
| HNSC | TCGA-CV-7407-01 | exon_skip_470004 exon_skip_470002 | 101559395 | 101559505 | 101559503 | 101559503 | Nonsense_Mutation | G | T | p.E47* |
| HNSC | TCGA-CV-7407-01 | exon_skip_470004 exon_skip_470002 | 101559395 | 101559505 | 101559503 | 101559503 | Nonsense_Mutation | G | T | p.E58* |
| SKCM | TCGA-FW-A3R5-06 | exon_skip_470005 | 101671378 | 101671425 | 101671417 | 101671417 | Nonsense_Mutation | C | T | p.Q72* |
| BRCA | TCGA-E9-A1N3-01 | exon_skip_470010 | 101740644 | 101740781 | 101740745 | 101740745 | Nonsense_Mutation | G | T | p.E124* |
| UCEC | TCGA-D1-A174-01 | exon_skip_470012 | 101747616 | 101747739 | 101747648 | 101747648 | Nonsense_Mutation | C | T | p.R147* |
| UCEC | TCGA-D1-A174-01 | exon_skip_470012 | 101747616 | 101747739 | 101747648 | 101747648 | Nonsense_Mutation | C | T | p.R158* |
| UCS | TCGA-NG-A4VW-01 | exon_skip_470012 | 101747616 | 101747739 | 101747648 | 101747648 | Nonsense_Mutation | C | T | p.R158* |
| UCS | TCGA-NG-A4VW-01 | exon_skip_470012 | 101747616 | 101747739 | 101747648 | 101747648 | Nonsense_Mutation | C | T | p.R158X |
| STAD | TCGA-CG-4306-01 | exon_skip_470014 | 101754978 | 101755054 | 101755048 | 101755048 | Nonsense_Mutation | C | T | p.Q201* |
| UCEC | TCGA-AP-A056-01 | exon_skip_470016 | 101758487 | 101758553 | 101758501 | 101758501 | Nonsense_Mutation | C | T | p.R208* |
| UCEC | TCGA-B5-A11E-01 | exon_skip_470016 | 101758487 | 101758553 | 101758501 | 101758501 | Nonsense_Mutation | C | T | p.R208* |
| UCEC | TCGA-BS-A0UV-01 | exon_skip_470016 | 101758487 | 101758553 | 101758501 | 101758501 | Nonsense_Mutation | C | T | p.R208* |
| UCEC | TCGA-D1-A16Y-01 | exon_skip_470016 | 101758487 | 101758553 | 101758501 | 101758501 | Nonsense_Mutation | C | T | p.R208* |
| UCEC | TCGA-D1-A17Q-01 | exon_skip_470016 | 101758487 | 101758553 | 101758501 | 101758501 | Nonsense_Mutation | C | T | p.R208* |
| UCEC | TCGA-D1-A17Q-01 | exon_skip_470016 | 101758487 | 101758553 | 101758540 | 101758540 | Nonsense_Mutation | G | T | p.E221* |
| UCEC | TCGA-B5-A11E-01 | exon_skip_470020 | 101813726 | 101813830 | 101813741 | 101813741 | Nonsense_Mutation | C | T | p.Q247* |
| LUAD | TCGA-78-7162-01 | exon_skip_470025 | 101833093 | 101833151 | 101833099 | 101833099 | Nonsense_Mutation | G | T | p.E342* |
| LUAD | TCGA-78-7162-01 | exon_skip_470025 | 101833093 | 101833151 | 101833099 | 101833099 | Nonsense_Mutation | G | T | p.E353* |
| HNSC | TCGA-BA-4078-01 | exon_skip_470028 | 101837122 | 101837170 | 101837129 | 101837129 | Nonsense_Mutation | A | T | p.K362* |
| HNSC | TCGA-BA-4078-01 | exon_skip_470028 | 101837122 | 101837170 | 101837129 | 101837129 | Nonsense_Mutation | A | T | p.K373* |
| LUAD | TCGA-86-8358-01 | exon_skip_470031 | 101843351 | 101843452 | 101843431 | 101843431 | Nonsense_Mutation | G | T | p.E692* |
| THCA | TCGA-EL-A3T1-01 | exon_skip_470033 | 101870647 | 101870949 | 101870709 | 101870709 | Nonsense_Mutation | G | T | p.E1065X |
| THCA | TCGA-EL-A3T1-01 | exon_skip_470033 | 101870647 | 101870949 | 101870709 | 101870709 | Nonsense_Mutation | G | T | p.E1076* |
| SKCM | TCGA-ER-A42L-06 | exon_skip_470033 | 101870647 | 101870949 | 101870865 | 101870865 | Nonsense_Mutation | C | T | p.Q1117X |
| SKCM | TCGA-ER-A42L-06 | exon_skip_470033 | 101870647 | 101870949 | 101870865 | 101870865 | Nonsense_Mutation | C | T | p.Q1128* |
| SKCM | TCGA-EE-A3J5-06 | exon_skip_470005 | 101671378 | 101671425 | 101671377 | 101671377 | Splice_Site | G | A | . |
| CESC | TCGA-Q1-A73O-01 | exon_skip_470014 | 101754978 | 101755054 | 101754977 | 101754977 | Splice_Site | G | A | e7-1 |
| COAD | TCGA-G4-6297-01 | exon_skip_470016 | 101758487 | 101758553 | 101758485 | 101758485 | Splice_Site | A | C | . |
| THCA | TCGA-DE-A69K-01 | exon_skip_470016 | 101758487 | 101758553 | 101758552 | 101758555 | Splice_Site | AAGT | - | p.236_splice |
| LUSC | TCGA-33-4566-01 | exon_skip_470017 | 101801840 | 101801888 | 101801838 | 101801838 | Splice_Site | A | G | p.K236_splice |
| STAD | TCGA-BR-7707-01 | exon_skip_470028 | 101837122 | 101837170 | 101837172 | 101837172 | Splice_Site | T | C | . |
| STAD | TCGA-BR-7707-01 | exon_skip_470028 | 101837122 | 101837170 | 101837172 | 101837172 | Splice_Site | T | C | p.Q375_splice |
| LUSC | TCGA-66-2758-01 | exon_skip_470033 | 101870647 | 101870949 | 101870950 | 101870950 | Splice_Site | G | T | p.G1156_splice |
| - Depth of coverage in the three exons composing exon skipping event |
| Depth of coverage in three exons | Mutation description |
| - Non-synonymous mutations located in the skipped exons in CCLE. |
| Sample | Skipped exon start | Skipped exon end | Mutation start | Mutation end | Mutation type | Reference seq | Mutation seq | AAchange |
| 22RV1_PROSTATE | 101833093 | 101833151 | 101833103 | 101833103 | Frame_Shift_Del | A | - | p.E343fs |
| CMK_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 101559395 | 101559505 | 101559477 | 101559478 | Frame_Shift_Ins | - | CCGGGAGT | p.-39fs |
| A3KAW_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 101559395 | 101559505 | 101559475 | 101559475 | Missense_Mutation | G | C | p.Q37H |
| RKO_LARGE_INTESTINE | 101559395 | 101559505 | 101559495 | 101559495 | Missense_Mutation | A | G | p.N44S |
| GSU_STOMACH | 101671378 | 101671425 | 101671385 | 101671385 | Missense_Mutation | G | A | p.R50H |
| ISHIKAWAHERAKLIO02ER_ENDOMETRIUM | 101713619 | 101713697 | 101713668 | 101713668 | Missense_Mutation | A | C | p.N80T |
| SNU1040_LARGE_INTESTINE | 101740644 | 101740781 | 101740650 | 101740650 | Missense_Mutation | T | C | p.V92A |
| LS180_LARGE_INTESTINE | 101740644 | 101740781 | 101740766 | 101740766 | Missense_Mutation | G | A | p.E131K |
| SKMM2_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 101740644 | 101740781 | 101740766 | 101740766 | Missense_Mutation | G | A | p.E131K |
| RKO_LARGE_INTESTINE | 101747616 | 101747739 | 101747627 | 101747627 | Missense_Mutation | A | G | p.K140E |
| MFE319_ENDOMETRIUM | 101747616 | 101747739 | 101747645 | 101747645 | Missense_Mutation | A | G | p.I146V |
| NB17_AUTONOMIC_GANGLIA | 101754978 | 101755054 | 101755018 | 101755018 | Missense_Mutation | G | A | p.E191K |
| CW2_LARGE_INTESTINE | 101758487 | 101758553 | 101758528 | 101758528 | Missense_Mutation | A | G | p.K217E |
| SBC1_LUNG | 101801840 | 101801888 | 101801880 | 101801880 | Missense_Mutation | G | C | p.A239P |
| HS742T_FIBROBLAST | 101813726 | 101813830 | 101813792 | 101813792 | Missense_Mutation | C | T | p.L264F |
| DG75_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 101821749 | 101821937 | 101821834 | 101821834 | Missense_Mutation | A | G | p.D305G |
| DG75_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 101821755 | 101821937 | 101821834 | 101821834 | Missense_Mutation | A | G | p.D305G |
| KMS12BM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 101821749 | 101821937 | 101821861 | 101821861 | Missense_Mutation | C | A | p.T314N |
| KMS12BM_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 101821755 | 101821937 | 101821861 | 101821861 | Missense_Mutation | C | A | p.T314N |
| NCIH2286_LUNG | 101821749 | 101821937 | 101821870 | 101821870 | Missense_Mutation | G | T | p.R317L |
| NCIH2286_LUNG | 101821755 | 101821937 | 101821870 | 101821870 | Missense_Mutation | G | T | p.R317L |
| CCK81_LARGE_INTESTINE | 101833093 | 101833151 | 101833113 | 101833113 | Missense_Mutation | A | T | p.K346N |
| HEC59_ENDOMETRIUM | 101833093 | 101833151 | 101833119 | 101833119 | Missense_Mutation | G | T | p.Q348H |
| HEC59_ENDOMETRIUM | 101833093 | 101833151 | 101833138 | 101833138 | Missense_Mutation | A | G | p.K355E |
| 2313287_STOMACH | 101837122 | 101837170 | 101837138 | 101837138 | Missense_Mutation | G | A | p.E365K |
| KIJK_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | 101843351 | 101843452 | 101843390 | 101843390 | Missense_Mutation | C | T | p.S667F |
| EN_ENDOMETRIUM | 101870647 | 101870949 | 101870778 | 101870778 | Missense_Mutation | A | G | p.K1088E |
| SW962_VULVA | 101870647 | 101870949 | 101870797 | 101870797 | Missense_Mutation | A | C | p.D1094A |
| CORL303_LUNG | 101870647 | 101870949 | 101870797 | 101870797 | Missense_Mutation | A | C | p.D1094A |
| MB1_THYROID | 101870647 | 101870949 | 101870884 | 101870885 | Missense_Mutation | CC | GT | p.S1123C |
| HS633T_SOFT_TISSUE | 101870647 | 101870949 | 101870884 | 101870884 | Missense_Mutation | C | T | p.S1123F |
| LB996EBV_MATCHED_NORMAL_TISSUE | 101870647 | 101870949 | 101870884 | 101870885 | Missense_Mutation | CC | GT | p.S1123C |
| LB996RCC_KIDNEY | 101870647 | 101870949 | 101870884 | 101870885 | Missense_Mutation | CC | GT | p.S1123C |
| SNU1_STOMACH | 101870647 | 101870949 | 101870916 | 101870916 | Missense_Mutation | C | T | p.R1134W |
| HCC2157_BREAST | 101918518 | 101918630 | 101918535 | 101918535 | Missense_Mutation | A | G | p.S488G |
| NCIH1734_LUNG | 101918518 | 101918630 | 101918611 | 101918611 | Missense_Mutation | G | A | p.R513Q |
| SW1271_LUNG | 101921220 | 101921336 | 101921226 | 101921226 | Missense_Mutation | C | T | p.R522C |
| RKO_LARGE_INTESTINE | 101921220 | 101921336 | 101921226 | 101921226 | Missense_Mutation | C | T | p.R522C |
| OC316_OVARY | 101921220 | 101921336 | 101921236 | 101921236 | Missense_Mutation | A | C | p.Q525P |
| HEC108_ENDOMETRIUM | 101921220 | 101921336 | 101921277 | 101921277 | Missense_Mutation | C | T | p.R539C |
| LS411N_LARGE_INTESTINE | 101924096 | 101924152 | 101924099 | 101924099 | Missense_Mutation | C | T | p.R588W |
| MOGGUVW_CENTRAL_NERVOUS_SYSTEM | 101924096 | 101924152 | 101924100 | 101924100 | Missense_Mutation | G | A | p.R588Q |
| RKO_LARGE_INTESTINE | 101926004 | 101926068 | 101926061 | 101926061 | Missense_Mutation | G | A | p.A652T |
| LNCAPCLONEFGC_PROSTATE | 101747616 | 101747739 | 101747729 | 101747729 | Nonsense_Mutation | G | T | p.E174* |
| JHUEM7_ENDOMETRIUM | 101758487 | 101758553 | 101758501 | 101758501 | Nonsense_Mutation | C | T | p.R208* |
| LNCAPCLONEFGC_PROSTATE | 101758487 | 101758553 | 101758537 | 101758537 | Nonsense_Mutation | G | T | p.E220* |
| EFM19_BREAST | 101801840 | 101801888 | 101801853 | 101801853 | Nonsense_Mutation | G | T | p.E230* |
| NCIH1838_LUNG | 101821749 | 101821937 | 101821812 | 101821812 | Nonsense_Mutation | G | T | p.E298* |
| NCIH1838_LUNG | 101821755 | 101821937 | 101821812 | 101821812 | Nonsense_Mutation | G | T | p.E298* |
| HEC108_ENDOMETRIUM | 101747616 | 101747739 | 101747738 | 101747738 | Splice_Site | A | T | p.R177* |
| RH18_SOFT_TISSUE | 101924096 | 101924152 | 101924152 | 101924152 | Splice_Site | G | A | p.M605I |
Top |
Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for CUX1 |
| sQTL information located at the skipped exons. |
| Exon skip ID | Chromosome | Three exons | Skippped exon | ENST | Cancer type | SNP id | Location | DNA change (ref/var) | P-value |
| exon_skip_470028 | 7 | 101833092:101833151:101837121:101837170:101838786:101838883 | 101837121:101837170 | ENST00000560541.1,ENST00000546411.2,ENST00000547394.2,ENST00000437600.4,ENST00000292538.4,ENST00000549414.2,ENST00000558836.1,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENST00000425244.2,ENST00000393824.3 | BRCA | rs11540899 | chr7:101837149 | G/A | 6.24e-05 |
| exon_skip_470028 | 7 | 101833092:101833151:101837121:101837170:101838786:101838883 | 101837121:101837170 | ENST00000560541.1,ENST00000546411.2,ENST00000547394.2,ENST00000437600.4,ENST00000292538.4,ENST00000549414.2,ENST00000558836.1,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENST00000425244.2,ENST00000393824.3 | LUAD | rs11540899 | chr7:101837149 | G/A | 2.09e-03 |
| exon_skip_470028 | 7 | 101833092:101833151:101837121:101837170:101838786:101838883 | 101837121:101837170 | ENST00000560541.1,ENST00000546411.2,ENST00000547394.2,ENST00000437600.4,ENST00000292538.4,ENST00000549414.2,ENST00000558836.1,ENST00000360264.3,ENST00000556210.1,ENST00000550008.2,ENST00000292535.7,ENST00000425244.2,ENST00000393824.3 | OV | rs11540899 | chr7:101837149 | G/A | 2.07e-03 |
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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for CUX1 |
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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for CUX1 |
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RelatedDrugs for CUX1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CUX1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| CUX1 | C0041696 | Unipolar Depression | 3 | PSYGENET |
| CUX1 | C1269683 | Major Depressive Disorder | 3 | PSYGENET |
| CUX1 | C0525045 | Mood Disorders | 1 | PSYGENET |
| CUX1 | C0596263 | Carcinogenesis | 1 | CTD_human |
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