ExonSkipDB Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Gene structures and expression levels

leaf

Exon skipping events with PSIs in TCGA

leaf

Exon skipping events with PSIs in GTEx

leaf

Open reading frame (ORF) annotation in the exon skipping event

leaf

Exon skipping events in the canonical protein sequence

leaf

SNVs in the skipped exons with depth of coverage

leaf

Splicing Quantitative Trait Loci (sQTLs) in the skipped exons

leaf

Splicing Quantitative Trait Methylation (sQTM) in the skipped exon

leaf

Related drugs with this gene

leaf

Related diseases with this gene

Gene summary for CTNNB1

check button Gene summary
Gene informationGene symbol

CTNNB1

Gene ID

1499

Gene namecatenin beta 1
SynonymsCTNNB|EVR7|MRD19|armadillo
Cytomap

3p22.1

Type of geneprotein-coding
Descriptioncatenin beta-1catenin (cadherin-associated protein), beta 1, 88kDa
Modification date20180527
UniProtAcc

P35222

ContextPubMed: CTNNB1 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract]
- Title (PMID)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CTNNB1

GO:0008285

negative regulation of cell proliferation

12970740

CTNNB1

GO:0030997

regulation of centriole-centriole cohesion

18086858

CTNNB1

GO:0032355

response to estradiol

15304487

CTNNB1

GO:0033234

negative regulation of protein sumoylation

22155184

CTNNB1

GO:0043065

positive regulation of apoptotic process

12651860|12970740

CTNNB1

GO:0043525

positive regulation of neuron apoptotic process

19591802

CTNNB1

GO:0045893

positive regulation of transcription, DNA-templated

12970740|18787224

CTNNB1

GO:0045944

positive regulation of transcription by RNA polymerase II

9065402|11751639|12651860|14660579|18193033

CTNNB1

GO:0060070

canonical Wnt signaling pathway

10644691|12937339|19187541

CTNNB1

GO:0071681

cellular response to indole-3-methanol

10868478

CTNNB1

GO:0090279

regulation of calcium ion import

19996314

CTNNB1

GO:1904798

positive regulation of core promoter binding

22723415

CTNNB1

GO:2000008

regulation of protein localization to cell surface

19996314


Top

Exon skipping events across known transcript of Ensembl for CTNNB1 from UCSC genome browser

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

Top

Gene isoform structures and expression levels for CTNNB1

check button Expression levels of gene isoforms across TCGA.
gencode gene structure

check button Expression levels of gene isoforms across GTEx.
gencode gene structure


Top

Exon skipping events with PSIs in TCGA for CTNNB1

check button Information of exkip skipping event in TCGA.
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_373226341240995:41241161:41265511:41265572:41266016:4126604241265511:41265572ENSG00000168036.12ENST00000349496.5,ENST00000396185.3,ENST00000396183.3
exon_skip_373232341265522:41265572:41265680:41265812:41266016:4126604241265680:41265812ENSG00000168036.12ENST00000426215.1,ENST00000453024.1
exon_skip_373234341265511:41265572:41266016:41266244:41266444:4126650341266016:41266244ENSG00000168036.12ENST00000349496.5,ENST00000396185.3,ENST00000450969.1,ENST00000441708.1,ENST00000396183.3,ENST00000431914.1,ENST00000405570.1
exon_skip_373236341266016:41266244:41266444:41266698:41266824:4126704741266444:41266698ENSG00000168036.12ENST00000349496.5,ENST00000396185.3,ENST00000488914.1,ENST00000396183.3,ENST00000453024.1,ENST00000405570.1
exon_skip_373237341267150:41267352:41268698:41268843:41274831:4127493541268698:41268843ENSG00000168036.12ENST00000349496.5,ENST00000396185.3,ENST00000396183.3,ENST00000453024.1,ENST00000405570.1
exon_skip_373238341275644:41275788:41277214:41277334:41277839:4127799041277214:41277334ENSG00000168036.12ENST00000349496.5,ENST00000396185.3,ENST00000465552.1,ENST00000396183.3,ENST00000453024.1,ENST00000405570.1
exon_skip_373246341278078:41278200:41279506:41279567:41280624:4128084441279506:41279567ENSG00000168036.12ENST00000349496.5,ENST00000396185.3,ENST00000396183.3,ENST00000453024.1,ENST00000405570.1
exon_skip_373271341279506:41279567:41280624:41280845:41281150:4128122741280624:41280845ENSG00000168036.12ENST00000396185.3,ENST00000453024.1
exon_skip_373273341279506:41279567:41280624:41280845:41281309:4128193441280624:41280845ENSG00000168036.12ENST00000396183.3

check button PSI values of skipped exons in TCGA.
psi tcga

Top

Exon skipping events with PSIs in GTEx for CTNNB1

check button Information of exkip skipping event in GTEx
Exon skip IDchrExons involved in exon skippingSkipped exonENSGENSTs
exon_skip_373226341240995:41241161:41265511:41265572:41266016:4126604241265511:41265572ENSG00000168036.12ENST00000396183.3,ENST00000349496.5,ENST00000396185.3
exon_skip_373232341265522:41265572:41265680:41265812:41266016:4126604241265680:41265812ENSG00000168036.12ENST00000426215.1,ENST00000453024.1
exon_skip_373236341266016:41266244:41266444:41266698:41266824:4126704741266444:41266698ENSG00000168036.12ENST00000405570.1,ENST00000396183.3,ENST00000349496.5,ENST00000453024.1,ENST00000396185.3,ENST00000488914.1
exon_skip_373237341267150:41267352:41268698:41268843:41274831:4127493541268698:41268843ENSG00000168036.12ENST00000405570.1,ENST00000396183.3,ENST00000349496.5,ENST00000453024.1,ENST00000396185.3
exon_skip_373238341275644:41275788:41277214:41277334:41277839:4127799041277214:41277334ENSG00000168036.12ENST00000405570.1,ENST00000396183.3,ENST00000349496.5,ENST00000453024.1,ENST00000396185.3,ENST00000465552.1
exon_skip_373246341278078:41278200:41279506:41279567:41280624:4128084441279506:41279567ENSG00000168036.12ENST00000405570.1,ENST00000396183.3,ENST00000349496.5,ENST00000453024.1,ENST00000396185.3
exon_skip_373271341279506:41279567:41280624:41280845:41281150:4128122741280624:41280845ENSG00000168036.12ENST00000453024.1,ENST00000396185.3
exon_skip_373273341279506:41279567:41280624:41280845:41281309:4128193441280624:41280845ENSG00000168036.12ENST00000396183.3

check button PSI values of skipped exons in GTEx.
psi gtex

* Skipped exon sequences.

Top

Open reading frame (ORF) annotation in the exon skipping event for CTNNB1

check button Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST0000039618341280624412808453UTR-3CDS
ENST0000039618541280624412808453UTR-3CDS
ENST0000034949641265511412655725CDS-5UTR
ENST0000039618341265511412655725CDS-5UTR
ENST0000039618541265511412655725CDS-5UTR
ENST000003494964126644441266698Frame-shift
ENST000003961834126644441266698Frame-shift
ENST000003961854126644441266698Frame-shift
ENST000004055704126644441266698Frame-shift
ENST000003494964126869841268843Frame-shift
ENST000003961834126869841268843Frame-shift
ENST000003961854126869841268843Frame-shift
ENST000004055704126869841268843Frame-shift
ENST000003494964127950641279567Frame-shift
ENST000003961834127950641279567Frame-shift
ENST000003961854127950641279567Frame-shift
ENST000004055704127950641279567Frame-shift
ENST000003494964126601641266244In-frame
ENST000003961834126601641266244In-frame
ENST000003961854126601641266244In-frame
ENST000004055704126601641266244In-frame
ENST000003494964127721441277334In-frame
ENST000003961834127721441277334In-frame
ENST000003961854127721441277334In-frame
ENST000004055704127721441277334In-frame

check button Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms.
ENSTStart of skipped exonEnd of skipped exonORF
ENST0000039618341280624412808453UTR-3CDS
ENST0000039618541280624412808453UTR-3CDS
ENST0000034949641265511412655725CDS-5UTR
ENST0000039618341265511412655725CDS-5UTR
ENST0000039618541265511412655725CDS-5UTR
ENST000003494964126644441266698Frame-shift
ENST000003961834126644441266698Frame-shift
ENST000003961854126644441266698Frame-shift
ENST000004055704126644441266698Frame-shift
ENST000003494964126869841268843Frame-shift
ENST000003961834126869841268843Frame-shift
ENST000003961854126869841268843Frame-shift
ENST000004055704126869841268843Frame-shift
ENST000003494964127950641279567Frame-shift
ENST000003961834127950641279567Frame-shift
ENST000003961854127950641279567Frame-shift
ENST000004055704127950641279567Frame-shift
ENST000003494964127721441277334In-frame
ENST000003961834127721441277334In-frame
ENST000003961854127721441277334In-frame
ENST000004055704127721441277334In-frame

Top

Infer the effects of exon skipping event on protein functional features for CTNNB1

check button Exon skipping at the protein sequence level and followed lost functional features.
* Click on the image to enlarge it in a new window.
prot feature distribution

check button Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST0000034949637467814126601641266244294521480
ENST0000039618332857814126601641266244299526480
ENST0000039618533737814126601641266244228455480
ENST0000040557025307814126601641266244170397480
ENST000003494963746781412772144127733419642083561601
ENST000003961833285781412772144127733419692088561601
ENST000003961853373781412772144127733418982017561601
ENST000004055702530781412772144127733418401959561601

check button Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases.
ENSTLength of mRNALength of AA seq.Genomic startGenomic endmRNA startmRNA endAA startAA end
ENST000003494963746781412772144127733419642083561601
ENST000003961833285781412772144127733419692088561601
ENST000003961853373781412772144127733418982017561601
ENST000004055702530781412772144127733418401959561601

check button Lost protein functional features of individual exon skipping events in TCGA.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
P352224802781ChainID=PRO_0000064271;Note=Catenin beta-1
P352224802781ChainID=PRO_0000064271;Note=Catenin beta-1
P352224802781ChainID=PRO_0000064271;Note=Catenin beta-1
P352224802781ChainID=PRO_0000064271;Note=Catenin beta-1
P352224802323GlycosylationNote=O-linked (GlcNAc) serine%3B alternate;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24342833;Dbxref=PMID:24342833
P352224802323GlycosylationNote=O-linked (GlcNAc) serine%3B alternate;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24342833;Dbxref=PMID:24342833
P352224802323GlycosylationNote=O-linked (GlcNAc) serine%3B alternate;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24342833;Dbxref=PMID:24342833
P352224802323GlycosylationNote=O-linked (GlcNAc) serine%3B alternate;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24342833;Dbxref=PMID:24342833
P352224802323Modified residueNote=Phosphoserine%3B by GSK3-beta%3B alternate;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224802323Modified residueNote=Phosphoserine%3B by GSK3-beta%3B alternate;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224802323Modified residueNote=Phosphoserine%3B by GSK3-beta%3B alternate;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224802323Modified residueNote=Phosphoserine%3B by GSK3-beta%3B alternate;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224802929Modified residueNote=Phosphoserine%3B by GSK3-beta;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224802929Modified residueNote=Phosphoserine%3B by GSK3-beta;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224802929Modified residueNote=Phosphoserine%3B by GSK3-beta;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224802929Modified residueNote=Phosphoserine%3B by GSK3-beta;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224803333Modified residueNote=Phosphoserine%3B by GSK3-beta and HIPK2;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:20307497,ECO:0000269|PubMed:25169422;Dbxref=PMID:20307497,PMID:25169422
P352224803333Modified residueNote=Phosphoserine%3B by GSK3-beta and HIPK2;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:20307497,ECO:0000269|PubMed:25169422;Dbxref=PMID:20307497,PMID:25169422
P352224803333Modified residueNote=Phosphoserine%3B by GSK3-beta and HIPK2;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:20307497,ECO:0000269|PubMed:25169422;Dbxref=PMID:20307497,PMID:25169422
P352224803333Modified residueNote=Phosphoserine%3B by GSK3-beta and HIPK2;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:20307497,ECO:0000269|PubMed:25169422;Dbxref=PMID:20307497,PMID:25169422
P352224803737Modified residueNote=Phosphoserine%3B by GSK3-beta and HIPK2;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20307497;Dbxref=PMID:20307497
P352224803737Modified residueNote=Phosphoserine%3B by GSK3-beta and HIPK2;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20307497;Dbxref=PMID:20307497
P352224803737Modified residueNote=Phosphoserine%3B by GSK3-beta and HIPK2;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20307497;Dbxref=PMID:20307497
P352224803737Modified residueNote=Phosphoserine%3B by GSK3-beta and HIPK2;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20307497;Dbxref=PMID:20307497
P352224804141Modified residueNote=Phosphothreonine%3B by GSK3-beta;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224804141Modified residueNote=Phosphothreonine%3B by GSK3-beta;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224804141Modified residueNote=Phosphothreonine%3B by GSK3-beta;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224804141Modified residueNote=Phosphothreonine%3B by GSK3-beta;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224804545Modified residueNote=Phosphoserine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12051714;Dbxref=PMID:12051714
P352224804545Modified residueNote=Phosphoserine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12051714;Dbxref=PMID:12051714
P352224804545Modified residueNote=Phosphoserine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12051714;Dbxref=PMID:12051714
P352224804545Modified residueNote=Phosphoserine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12051714;Dbxref=PMID:12051714
P352224804949Modified residueNote=N6-acetyllysine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24824780;Dbxref=PMID:24824780
P352224804949Modified residueNote=N6-acetyllysine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24824780;Dbxref=PMID:24824780
P352224804949Modified residueNote=N6-acetyllysine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24824780;Dbxref=PMID:24824780
P352224804949Modified residueNote=N6-acetyllysine;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24824780;Dbxref=PMID:24824780
P352224806464Modified residueNote=Phosphotyrosine%3B by PTK6;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20026641;Dbxref=PMID:20026641
P352224806464Modified residueNote=Phosphotyrosine%3B by PTK6;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20026641;Dbxref=PMID:20026641
P352224806464Modified residueNote=Phosphotyrosine%3B by PTK6;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20026641;Dbxref=PMID:20026641
P352224806464Modified residueNote=Phosphotyrosine%3B by PTK6;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20026641;Dbxref=PMID:20026641
P352224802929MutagenesisNote=No effect. S->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224802929MutagenesisNote=No effect. S->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224802929MutagenesisNote=No effect. S->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224802929MutagenesisNote=No effect. S->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:12027456;Dbxref=PMID:12027456
P352224806464MutagenesisNote=Abolishes phosphorylation by PTK6. Y->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20026641;Dbxref=PMID:20026641
P352224806464MutagenesisNote=Abolishes phosphorylation by PTK6. Y->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20026641;Dbxref=PMID:20026641
P352224806464MutagenesisNote=Abolishes phosphorylation by PTK6. Y->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20026641;Dbxref=PMID:20026641
P352224806464MutagenesisNote=Abolishes phosphorylation by PTK6. Y->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:20026641;Dbxref=PMID:20026641
P352224802323Natural variantID=VAR_017612;Note=In hepatocellular carcinoma%3B no effect. S->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:12027456;Dbxref=dbSNP:rs1413975856,PMID:10435629,PMID:12027456
P352224802323Natural variantID=VAR_017612;Note=In hepatocellular carcinoma%3B no effect. S->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:12027456;Dbxref=dbSNP:rs1413975856,PMID:10435629,PMID:12027456
P352224802323Natural variantID=VAR_017612;Note=In hepatocellular carcinoma%3B no effect. S->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:12027456;Dbxref=dbSNP:rs1413975856,PMID:10435629,PMID:12027456
P352224802323Natural variantID=VAR_017612;Note=In hepatocellular carcinoma%3B no effect. S->R;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:12027456;Dbxref=dbSNP:rs1413975856,PMID:10435629,PMID:12027456
P352224802533Natural variantID=VAR_017613;Note=In hepatocellular carcinoma. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224802533Natural variantID=VAR_017613;Note=In hepatocellular carcinoma. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224802533Natural variantID=VAR_017613;Note=In hepatocellular carcinoma. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224802533Natural variantID=VAR_017613;Note=In hepatocellular carcinoma. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803232Natural variantID=VAR_017614;Note=In hepatocellular carcinoma. D->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913396,PMID:10435629
P352224803232Natural variantID=VAR_017614;Note=In hepatocellular carcinoma. D->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913396,PMID:10435629
P352224803232Natural variantID=VAR_017614;Note=In hepatocellular carcinoma. D->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913396,PMID:10435629
P352224803232Natural variantID=VAR_017614;Note=In hepatocellular carcinoma. D->A;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913396,PMID:10435629
P352224803232Natural variantID=VAR_017615;Note=In PTR and hepatocellular carcinoma. D->G;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913396,PMID:10192393,PMID:10435629
P352224803232Natural variantID=VAR_017615;Note=In PTR and hepatocellular carcinoma. D->G;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913396,PMID:10192393,PMID:10435629
P352224803232Natural variantID=VAR_017615;Note=In PTR and hepatocellular carcinoma. D->G;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913396,PMID:10192393,PMID:10435629
P352224803232Natural variantID=VAR_017615;Note=In PTR and hepatocellular carcinoma. D->G;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913396,PMID:10192393,PMID:10435629
P352224803232Natural variantID=VAR_017616;Note=In PTR%2C hepatoblastoma and hepatocellular carcinoma. D->Y;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:11703283,ECO:0000269|PubMed:99
P352224803232Natural variantID=VAR_017616;Note=In PTR%2C hepatoblastoma and hepatocellular carcinoma. D->Y;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:11703283,ECO:0000269|PubMed:99
P352224803232Natural variantID=VAR_017616;Note=In PTR%2C hepatoblastoma and hepatocellular carcinoma. D->Y;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:11703283,ECO:0000269|PubMed:99
P352224803232Natural variantID=VAR_017616;Note=In PTR%2C hepatoblastoma and hepatocellular carcinoma. D->Y;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:11703283,ECO:0000269|PubMed:99
P352224803333Natural variantID=VAR_017617;Note=In PTR%2C MDB and hepatocellular carcinoma. S->F;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:10666372;Dbxref=dbSNP:rs121913400,PMID:10192393,PMID:
P352224803333Natural variantID=VAR_017617;Note=In PTR%2C MDB and hepatocellular carcinoma. S->F;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:10666372;Dbxref=dbSNP:rs121913400,PMID:10192393,PMID:
P352224803333Natural variantID=VAR_017617;Note=In PTR%2C MDB and hepatocellular carcinoma. S->F;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:10666372;Dbxref=dbSNP:rs121913400,PMID:10192393,PMID:
P352224803333Natural variantID=VAR_017617;Note=In PTR%2C MDB and hepatocellular carcinoma. S->F;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:10666372;Dbxref=dbSNP:rs121913400,PMID:10192393,PMID:
P352224803333Natural variantID=VAR_017618;Note=In hepatocellular carcinoma. S->L;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803333Natural variantID=VAR_017618;Note=In hepatocellular carcinoma. S->L;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803333Natural variantID=VAR_017618;Note=In hepatocellular carcinoma. S->L;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803333Natural variantID=VAR_017618;Note=In hepatocellular carcinoma. S->L;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803333Natural variantID=VAR_017619;Note=In colorectal cancer and PTR%3B enhances transactivation of target genes. S->Y;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:12027456,ECO:0000269|PubMed:9065402;Dbxref=dbSNP:rs
P352224803333Natural variantID=VAR_017619;Note=In colorectal cancer and PTR%3B enhances transactivation of target genes. S->Y;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:12027456,ECO:0000269|PubMed:9065402;Dbxref=dbSNP:rs
P352224803333Natural variantID=VAR_017619;Note=In colorectal cancer and PTR%3B enhances transactivation of target genes. S->Y;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:12027456,ECO:0000269|PubMed:9065402;Dbxref=dbSNP:rs
P352224803333Natural variantID=VAR_017619;Note=In colorectal cancer and PTR%3B enhances transactivation of target genes. S->Y;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:12027456,ECO:0000269|PubMed:9065402;Dbxref=dbSNP:rs
P352224803434Natural variantID=VAR_017620;Note=In PTR. G->E;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10192393;Dbxref=dbSNP:rs28931589,PMID:10192393
P352224803434Natural variantID=VAR_017620;Note=In PTR. G->E;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10192393;Dbxref=dbSNP:rs28931589,PMID:10192393
P352224803434Natural variantID=VAR_017620;Note=In PTR. G->E;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10192393;Dbxref=dbSNP:rs28931589,PMID:10192393
P352224803434Natural variantID=VAR_017620;Note=In PTR. G->E;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10192393;Dbxref=dbSNP:rs28931589,PMID:10192393
P352224803434Natural variantID=VAR_017621;Note=In hepatocellular carcinoma. G->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913399,PMID:10435629
P352224803434Natural variantID=VAR_017621;Note=In hepatocellular carcinoma. G->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913399,PMID:10435629
P352224803434Natural variantID=VAR_017621;Note=In hepatocellular carcinoma. G->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913399,PMID:10435629
P352224803434Natural variantID=VAR_017621;Note=In hepatocellular carcinoma. G->R;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913399,PMID:10435629
P352224803434Natural variantID=VAR_017622;Note=In hepatoblastoma. G->V;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9927029;Dbxref=dbSNP:rs28931589,PMID:9927029
P352224803434Natural variantID=VAR_017622;Note=In hepatoblastoma. G->V;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9927029;Dbxref=dbSNP:rs28931589,PMID:9927029
P352224803434Natural variantID=VAR_017622;Note=In hepatoblastoma. G->V;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9927029;Dbxref=dbSNP:rs28931589,PMID:9927029
P352224803434Natural variantID=VAR_017622;Note=In hepatoblastoma. G->V;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9927029;Dbxref=dbSNP:rs28931589,PMID:9927029
P352224803535Natural variantID=VAR_017623;Note=In hepatocellular carcinoma. I->S;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803535Natural variantID=VAR_017623;Note=In hepatocellular carcinoma. I->S;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803535Natural variantID=VAR_017623;Note=In hepatocellular carcinoma. I->S;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803535Natural variantID=VAR_017623;Note=In hepatocellular carcinoma. I->S;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803738Natural variantID=VAR_017628;Note=In hepatocellular carcinoma. SG->W;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803738Natural variantID=VAR_017628;Note=In hepatocellular carcinoma. SG->W;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803738Natural variantID=VAR_017628;Note=In hepatocellular carcinoma. SG->W;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803738Natural variantID=VAR_017628;Note=In hepatocellular carcinoma. SG->W;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=PMID:10435629
P352224803737Natural variantID=VAR_017624;Note=In MDB and hepatocellular carcinoma%3B enhances transactivation of target genes. S->A;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:10666372,ECO:0000269|PubMed:12027456;Dbxref=
P352224803737Natural variantID=VAR_017624;Note=In MDB and hepatocellular carcinoma%3B enhances transactivation of target genes. S->A;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:10666372,ECO:0000269|PubMed:12027456;Dbxref=
P352224803737Natural variantID=VAR_017624;Note=In MDB and hepatocellular carcinoma%3B enhances transactivation of target genes. S->A;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:10666372,ECO:0000269|PubMed:12027456;Dbxref=
P352224803737Natural variantID=VAR_017624;Note=In MDB and hepatocellular carcinoma%3B enhances transactivation of target genes. S->A;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10435629,ECO:0000269|PubMed:10666372,ECO:0000269|PubMed:12027456;Dbxref=
P352224803737Natural variantID=VAR_017625;Note=In PTR%2C hepatoblastoma and ovarian cancer. S->C;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10391090,ECO:0000269|PubMed:9927029;Dbxref=dbSNP:rs121913403,PMID:10192393,PMID:
P352224803737Natural variantID=VAR_017625;Note=In PTR%2C hepatoblastoma and ovarian cancer. S->C;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10391090,ECO:0000269|PubMed:9927029;Dbxref=dbSNP:rs121913403,PMID:10192393,PMID:
P352224803737Natural variantID=VAR_017625;Note=In PTR%2C hepatoblastoma and ovarian cancer. S->C;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10391090,ECO:0000269|PubMed:9927029;Dbxref=dbSNP:rs121913403,PMID:10192393,PMID:
P352224803737Natural variantID=VAR_017625;Note=In PTR%2C hepatoblastoma and ovarian cancer. S->C;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10391090,ECO:0000269|PubMed:9927029;Dbxref=dbSNP:rs121913403,PMID:10192393,PMID:
P352224803737Natural variantID=VAR_017626;Note=In PTR. S->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10192393;Dbxref=dbSNP:rs121913403,PMID:10192393
P352224803737Natural variantID=VAR_017626;Note=In PTR. S->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10192393;Dbxref=dbSNP:rs121913403,PMID:10192393
P352224803737Natural variantID=VAR_017626;Note=In PTR. S->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10192393;Dbxref=dbSNP:rs121913403,PMID:10192393
P352224803737Natural variantID=VAR_017626;Note=In PTR. S->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10192393;Dbxref=dbSNP:rs121913403,PMID:10192393
P352224803737Natural variantID=VAR_017627;Note=In hepatocellular carcinoma. S->Y;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913403,PMID:10435629
P352224803737Natural variantID=VAR_017627;Note=In hepatocellular carcinoma. S->Y;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913403,PMID:10435629
P352224803737Natural variantID=VAR_017627;Note=In hepatocellular carcinoma. S->Y;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913403,PMID:10435629
P352224803737Natural variantID=VAR_017627;Note=In hepatocellular carcinoma. S->Y;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913403,PMID:10435629
P352224804141Natural variantID=VAR_017629;Note=In hepatoblastoma and hepatocellular carcinoma%3B also in a desmoid tumor%3B strongly reduces phosphorylation and degradation%3B abolishes phosphorylation on Ser-33 and Ser-37 and enhances transactivation of target genes. T->A;Ontology_
P352224804141Natural variantID=VAR_017629;Note=In hepatoblastoma and hepatocellular carcinoma%3B also in a desmoid tumor%3B strongly reduces phosphorylation and degradation%3B abolishes phosphorylation on Ser-33 and Ser-37 and enhances transactivation of target genes. T->A;Ontology_
P352224804141Natural variantID=VAR_017629;Note=In hepatoblastoma and hepatocellular carcinoma%3B also in a desmoid tumor%3B strongly reduces phosphorylation and degradation%3B abolishes phosphorylation on Ser-33 and Ser-37 and enhances transactivation of target genes. T->A;Ontology_
P352224804141Natural variantID=VAR_017629;Note=In hepatoblastoma and hepatocellular carcinoma%3B also in a desmoid tumor%3B strongly reduces phosphorylation and degradation%3B abolishes phosphorylation on Ser-33 and Ser-37 and enhances transactivation of target genes. T->A;Ontology_
P352224804141Natural variantID=VAR_017630;Note=In PTR%2C hepatocellular carcinoma and ovarian cancer. T->I;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10391090,ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913413,PMID:101
P352224804141Natural variantID=VAR_017630;Note=In PTR%2C hepatocellular carcinoma and ovarian cancer. T->I;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10391090,ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913413,PMID:101
P352224804141Natural variantID=VAR_017630;Note=In PTR%2C hepatocellular carcinoma and ovarian cancer. T->I;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10391090,ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913413,PMID:101
P352224804141Natural variantID=VAR_017630;Note=In PTR%2C hepatocellular carcinoma and ovarian cancer. T->I;Ontology_term=ECO:0000269,ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:10192393,ECO:0000269|PubMed:10391090,ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913413,PMID:101
P352224804545Natural variantID=VAR_017631;Note=In hepatocellular carcinoma. S->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913409,PMID:10435629
P352224804545Natural variantID=VAR_017631;Note=In hepatocellular carcinoma. S->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913409,PMID:10435629
P352224804545Natural variantID=VAR_017631;Note=In hepatocellular carcinoma. S->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913409,PMID:10435629
P352224804545Natural variantID=VAR_017631;Note=In hepatocellular carcinoma. S->F;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913409,PMID:10435629
P352224804545Natural variantID=VAR_017632;Note=In hepatocellular carcinoma. S->P;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913407,PMID:10435629
P352224804545Natural variantID=VAR_017632;Note=In hepatocellular carcinoma. S->P;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913407,PMID:10435629
P352224804545Natural variantID=VAR_017632;Note=In hepatocellular carcinoma. S->P;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913407,PMID:10435629
P352224804545Natural variantID=VAR_017632;Note=In hepatocellular carcinoma. S->P;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:10435629;Dbxref=dbSNP:rs121913407,PMID:10435629
P352224804545Natural variantID=VAR_055430;Note=In colorectal cancer. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9065402;Dbxref=PMID:9065402
P352224804545Natural variantID=VAR_055430;Note=In colorectal cancer. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9065402;Dbxref=PMID:9065402
P352224804545Natural variantID=VAR_055430;Note=In colorectal cancer. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9065402;Dbxref=PMID:9065402
P352224804545Natural variantID=VAR_055430;Note=In colorectal cancer. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9065402;Dbxref=PMID:9065402
P35222480223RegionNote=Interaction with VCL;Ontology_term=ECO:0000250;evidence=ECO:0000250
P35222480223RegionNote=Interaction with VCL;Ontology_term=ECO:0000250;evidence=ECO:0000250
P35222480223RegionNote=Interaction with VCL;Ontology_term=ECO:0000250;evidence=ECO:0000250
P35222480223RegionNote=Interaction with VCL;Ontology_term=ECO:0000250;evidence=ECO:0000250
P35222561601561563Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1T08
P35222561601561563Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1T08
P35222561601561563Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1T08
P35222561601561563Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1T08
P352225616012781ChainID=PRO_0000064271;Note=Catenin beta-1
P352225616012781ChainID=PRO_0000064271;Note=Catenin beta-1
P352225616012781ChainID=PRO_0000064271;Note=Catenin beta-1
P352225616012781ChainID=PRO_0000064271;Note=Catenin beta-1
P35222561601566580HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601566580HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601566580HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601566580HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601584592HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601584592HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601584592HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601584592HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601596601HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601596601HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601596601HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601596601HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601558781Natural variantID=VAR_079199;Note=In MRD19%3B the patient also manifest features of exudative vitreoretinopathy. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28514307;Dbxref=PMID:28514307
P35222561601558781Natural variantID=VAR_079199;Note=In MRD19%3B the patient also manifest features of exudative vitreoretinopathy. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28514307;Dbxref=PMID:28514307
P35222561601558781Natural variantID=VAR_079199;Note=In MRD19%3B the patient also manifest features of exudative vitreoretinopathy. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28514307;Dbxref=PMID:28514307
P35222561601558781Natural variantID=VAR_079199;Note=In MRD19%3B the patient also manifest features of exudative vitreoretinopathy. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28514307;Dbxref=PMID:28514307
P35222561601531571RepeatNote=ARM 10
P35222561601531571RepeatNote=ARM 10
P35222561601531571RepeatNote=ARM 10
P35222561601531571RepeatNote=ARM 10
P35222561601594636RepeatNote=ARM 11
P35222561601594636RepeatNote=ARM 11
P35222561601594636RepeatNote=ARM 11
P35222561601594636RepeatNote=ARM 11


check button Lost protein functional features of individual exon skipping events in GTEx.
UniProt acc.Start of exon skipping (AA)End of exon skipping (AA)Protein feature start (AA)Protein feature end (AA)Category of protein featureDescription of feature
P35222561601561563Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1T08
P35222561601561563Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1T08
P35222561601561563Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1T08
P35222561601561563Beta strandOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1T08
P352225616012781ChainID=PRO_0000064271;Note=Catenin beta-1
P352225616012781ChainID=PRO_0000064271;Note=Catenin beta-1
P352225616012781ChainID=PRO_0000064271;Note=Catenin beta-1
P352225616012781ChainID=PRO_0000064271;Note=Catenin beta-1
P35222561601566580HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601566580HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601566580HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601566580HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601584592HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601584592HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601584592HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601584592HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601596601HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601596601HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601596601HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601596601HelixOntology_term=ECO:0000244;evidence=ECO:0000244|PDB:1JDH
P35222561601558781Natural variantID=VAR_079199;Note=In MRD19%3B the patient also manifest features of exudative vitreoretinopathy. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28514307;Dbxref=PMID:28514307
P35222561601558781Natural variantID=VAR_079199;Note=In MRD19%3B the patient also manifest features of exudative vitreoretinopathy. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28514307;Dbxref=PMID:28514307
P35222561601558781Natural variantID=VAR_079199;Note=In MRD19%3B the patient also manifest features of exudative vitreoretinopathy. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28514307;Dbxref=PMID:28514307
P35222561601558781Natural variantID=VAR_079199;Note=In MRD19%3B the patient also manifest features of exudative vitreoretinopathy. Missing;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:28514307;Dbxref=PMID:28514307
P35222561601531571RepeatNote=ARM 10
P35222561601531571RepeatNote=ARM 10
P35222561601531571RepeatNote=ARM 10
P35222561601531571RepeatNote=ARM 10
P35222561601594636RepeatNote=ARM 11
P35222561601594636RepeatNote=ARM 11
P35222561601594636RepeatNote=ARM 11
P35222561601594636RepeatNote=ARM 11


Top

SNVs in the skipped exons for CTNNB1

check button - Lollipop plot for presenting exon skipping associated SNVs.
* Click on the image to enlarge it in a new window.
lollipop

check button - Differential PSIs between mutated versus non-mutated samples.
CTNNB1_COAD_exon_skip_373234_psi_boxplot.png
boxplot
CTNNB1_ESCA_exon_skip_373234_psi_boxplot.png
boxplot
CTNNB1_LIHC_exon_skip_373234_psi_boxplot.png
boxplot
CTNNB1_SKCM_exon_skip_373234_psi_boxplot.png
boxplot

check button - Non-synonymous mutations located in the skipped exons in TCGA.
Cancer typeSampleESIDSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
ACCTCGA-OR-A5K6-01exon_skip_373234
41266017412662444126611741266139Frame_Shift_DelTGCCACTACCACAGCTCCTTCTC-p.38_45del
ACCTCGA-OR-A5K6-01exon_skip_373234
41266017412662444126611741266139Frame_Shift_DelTGCCACTACCACAGCTCCTTCTC-p.GATTTAPSL38fs
LIHCTCGA-BC-A10U-01exon_skip_373234
41266017412662444126613841266138Frame_Shift_DelT-p.S45fs
STADTCGA-BR-6452-01exon_skip_373236
41266445412666984126665441266654Frame_Shift_DelC-p.T150fs
LIHCTCGA-DD-A39Y-01exon_skip_373236
41266445412666984126667441266674Frame_Shift_DelA-p.T157fs
STADTCGA-B7-5816-01exon_skip_373237
41268699412688434126876341268763Frame_Shift_DelA-p.E334fs
LIHCTCGA-DD-A1EG-01exon_skip_373238
41277215412773344127729241277292Frame_Shift_DelA-p.R587fs
ACCTCGA-OR-A5J2-01exon_skip_373234
41266017412662444126609141266092Frame_Shift_Ins-Ap.P30fs
ACCTCGA-OR-A5J2-01exon_skip_373234
41266017412662444126609141266092Frame_Shift_Ins-Ap.Y30_L31delinsX
LIHCTCGA-BC-A10U-01exon_skip_373234
41266017412662444126613241266133Frame_Shift_Ins-Cp.A43fs
LIHCTCGA-BC-A10U-01exon_skip_373234
41266017412662444126613241266133Frame_Shift_Ins-Cp.F44fs
SKCMTCGA-EE-A182-06exon_skip_373234
41266017412662444126607741266077Nonsense_MutationGAp.W25*
COADTCGA-CA-6717-01exon_skip_373234
41266017412662444126607841266078Nonsense_MutationGAp.W25X
ACCTCGA-OR-A5J2-01exon_skip_373234
41266017412662444126609141266092Nonsense_Mutation-Ap.Y30_L31delinsX
ESCATCGA-L5-A8NR-01exon_skip_373234
41266017412662444126620541266205Nonsense_MutationCTp.Q68*
ESCATCGA-L5-A8NR-01exon_skip_373234
41266017412662444126620541266205Nonsense_MutationCTp.Q68X
HNSCTCGA-P3-A6SW-01exon_skip_373236
41266445412666984126647141266471Nonsense_MutationCTp.R90*
STADTCGA-CG-5721-01exon_skip_373236
41266445412666984126648641266486Nonsense_MutationCTp.R95*
STADTCGA-CG-5721-01exon_skip_373236
41266445412666984126648641266486Nonsense_MutationCTp.R95X
ESCATCGA-L5-A8NQ-01exon_skip_373237
41268699412688434126882241268822Nonsense_MutationATp.K354*
ESCATCGA-R6-A8W5-01exon_skip_373238
41277215412773344127724241277242Nonsense_MutationGTp.E571*
ESCATCGA-R6-A8W5-01exon_skip_373238
41277215412773344127724241277242Nonsense_MutationGTp.E571X

check button - Depth of coverage in the three exons composing exon skipping event
Depth of coverage in three exonsMutation description
CTNNB1_41265511_41265572_41266016_41266244_41266444_41266503_TCGA-L5-A8NR-01Sample: TCGA-L5-A8NR-01
Cancer type: ESCA
ESID: exon_skip_373234
Skipped exon start: 41266017
Skipped exon end: 41266244
Mutation start: 41266205
Mutation end: 41266205
Mutation type: Nonsense_Mutation
Reference seq: C
Mutation seq: T
AAchange: p.Q68X
CTNNB1_41265511_41265572_41266016_41266244_41266444_41266503_TCGA-L5-A8NR-01Sample: TCGA-L5-A8NR-01
Cancer type: ESCA
ESID: exon_skip_373234
Skipped exon start: 41266017
Skipped exon end: 41266244
Mutation start: 41266205
Mutation end: 41266205
Mutation type: Nonsense_Mutation
Reference seq: C
Mutation seq: T
AAchange: p.Q68*
exon_skip_373234_ESCA_TCGA-L5-A8NR-01.png
boxplot
exon_skip_384513_ESCA_TCGA-L5-A8NR-01.png
boxplot
exon_skip_460368_ESCA_TCGA-L5-A8NR-01.png
boxplot

check button - Non-synonymous mutations located in the skipped exons in CCLE.
SampleSkipped exon startSkipped exon endMutation startMutation endMutation typeReference seqMutation seqAAchange
HS936T_SKIN41266017412662444126603441266035Frame_Shift_Ins-Ap.D11fs
MM127_SKIN41266017412662444126613441266136In_Frame_DelCTT-p.S45del
COLO783_SKIN41266017412662444126613441266136In_Frame_DelCTT-p.S45del
HCT116_LARGE_INTESTINE41266017412662444126613441266136In_Frame_DelCTT-p.S45del
NCIH1092_LUNG41266017412662444126602041266020Missense_MutationAGp.D6G
HPBALL_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE41266017412662444126603541266035Missense_MutationAGp.D11G
OVCAR8_OVARY41266017412662444126608041266080Missense_MutationAGp.Q26R
SCS214_SOFT_TISSUE41266017412662444126609741266097Missense_MutationGTp.D32Y
KE39_STOMACH41266017412662444126609741266097Missense_MutationGAp.D32N
HEC265_ENDOMETRIUM41266017412662444126609841266098Missense_MutationATp.D32V
HEC6_ENDOMETRIUM41266017412662444126609841266098Missense_MutationATp.D32V
HCC2108_LUNG41266017412662444126610041266101Missense_MutationTCCTp.S33L
MORCPR_LUNG41266017412662444126610041266101Missense_MutationTCCTp.S33L
MORCPR_LUNG41266017412662444126610041266100Missense_MutationTCp.S33P
SW1573_LUNG41266017412662444126610141266101Missense_MutationCTp.S33F
SW48_LARGE_INTESTINE41266017412662444126610141266101Missense_MutationCAp.S33Y
SKMEL1_SKIN41266017412662444126610141266101Missense_MutationCGp.S33C
MORCPR_LUNG41266017412662444126610141266101Missense_MutationCTp.S33F
SYO1_SOFT_TISSUE41266017412662444126610341266104Missense_MutationGGTTp.G34L
HUH6_LIVER41266017412662444126610441266104Missense_MutationGTp.G34V
SNU719_STOMACH41266017412662444126610441266104Missense_MutationGTp.G34V
AGS_STOMACH41266017412662444126610441266104Missense_MutationGAp.G34E
HUH6CLONE5_LIVER41266017412662444126610441266104Missense_MutationGTp.G34V
HEC108_ENDOMETRIUM41266017412662444126611241266112Missense_MutationTCp.S37P
SNGM_ENDOMETRIUM41266017412662444126611241266112Missense_MutationTCp.S37P
TOV112D_OVARY41266017412662444126611241266112Missense_MutationTGp.S37A
HS571T_OVARY41266017412662444126611241266112Missense_MutationTGp.S37A
JHUEM2_ENDOMETRIUM41266017412662444126611341266113Missense_MutationCGp.S37C
HUTU80_SMALL_INTESTINE41266017412662444126611341266113Missense_MutationCTp.S37F
OVMIU_OVARY41266017412662444126611341266113Missense_MutationCTp.S37F
SNU398_LIVER41266017412662444126611341266113Missense_MutationCGp.S37C
A427_LUNG41266017412662444126612441266124Missense_MutationAGp.T41A
CCK81_LARGE_INTESTINE41266017412662444126612441266124Missense_MutationAGp.T41A
SNU407_LARGE_INTESTINE41266017412662444126612441266124Missense_MutationAGp.T41A
LIM1215_LARGE_INTESTINE41266017412662444126612441266124Missense_MutationAGp.T41A
LXF289_LUNG41266017412662444126612441266124Missense_MutationAGp.T41A
SNU869_BILIARY_TRACT41266017412662444126613641266136Missense_MutationTCp.S45P
OCUM1_STOMACH41266017412662444126613741266137Missense_MutationCGp.S45C
HCC15_LUNG41266017412662444126613741266137Missense_MutationCTp.S45F
LS180_LARGE_INTESTINE41266017412662444126613741266137Missense_MutationCTp.S45F
NCIH358_LUNG41266017412662444126622641266226Missense_MutationAGp.T75A
SCH_STOMACH41266445412666984126654641266546Missense_MutationGTp.D115Y
SNU1040_LARGE_INTESTINE41266445412666984126660741266607Missense_MutationCTp.A135V
SNU1040_LARGE_INTESTINE41266445412666984126665541266655Missense_MutationGAp.R151H
SNU81_LARGE_INTESTINE41268699412688434126876241268762Missense_MutationGAp.E334K
PL18_PANCREAS41277215412773344127727541277275Missense_MutationCTp.R582W
CW2_LARGE_INTESTINE41277215412773344127727641277276Missense_MutationGAp.R582Q
JJN3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE41277215412773344127732941277329Missense_MutationGTp.V600L
KYO1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE41280625412808454128070441280704Missense_MutationGAp.M739I
GP2D_LARGE_INTESTINE41280625412808454128075141280751Missense_MutationATp.D755V
HEC59_ENDOMETRIUM41280625412808454128080241280802Missense_MutationAGp.N772S

Top

Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for CTNNB1

check button sQTL information located at the skipped exons.
Exon skip IDChromosomeThree exonsSkippped exonENSTCancer typeSNP idLocationDNA change (ref/var)P-value

Top

Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for CTNNB1


Top

Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for CTNNB1


Top

RelatedDrugs for CTNNB1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
P35222DB03904UreaCatenin beta-1small moleculeapproved|investigational

Top

RelatedDiseases for CTNNB1

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource
CTNNB1C0009375Colonic Neoplasms9CTD_human
CTNNB1C0206711Pilomatrixoma8CTD_human;HPO;ORPHANET;UNIPROT
CTNNB1C0009404Colorectal Neoplasms4CTD_human
CTNNB1C0001418Adenocarcinoma3CTD_human
CTNNB1C0023904Liver Neoplasms, Experimental3CTD_human
CTNNB1C0025149Medulloblastoma3CTD_human;HPO;UNIPROT
CTNNB1C1527249Colorectal Cancer3UNIPROT
CTNNB1C1879526Aberrant Crypt Foci3CTD_human
CTNNB1C2239176Liver carcinoma3CTD_human;HPO
CTNNB1C0001430Adenoma2CTD_human
CTNNB1C0023903Liver neoplasms2CTD_human
CTNNB1C0036341Schizophrenia2PSYGENET
CTNNB1C1458155Mammary Neoplasms2CTD_human
CTNNB1C0001624Adrenal Gland Neoplasms1CTD_human
CTNNB1C0007528Cecal Neoplasms1CTD_human
CTNNB1C0007873Uterine Cervical Neoplasm1CTD_human
CTNNB1C0010276Craniopharyngioma1CTD_human;ORPHANET
CTNNB1C0018923Hemangiosarcoma1CTD_human
CTNNB1C0021841Intestinal Neoplasms1CTD_human
CTNNB1C0023890Liver Cirrhosis1CTD_human
CTNNB1C0024121Lung Neoplasms1CTD_human
CTNNB1C0026846Muscular Atrophy1CTD_human
CTNNB1C0027626Neoplasm Invasiveness1CTD_human
CTNNB1C0027708Nephroblastoma1CTD_human
CTNNB1C0027746Nerve Degeneration1CTD_human
CTNNB1C0030297Pancreatic Neoplasm1CTD_human
CTNNB1C0031149Peritoneal Neoplasms1CTD_human
CTNNB1C0033578Prostatic Neoplasms1CTD_human
CTNNB1C0038325Stevens-Johnson Syndrome1CTD_human
CTNNB1C0206624Hepatoblastoma1CTD_human
CTNNB1C0206669Hepatocellular Adenoma1CTD_human
CTNNB1C0206686Adrenocortical carcinoma1CTD_human
CTNNB1C0232347No-Reflow Phenomenon1CTD_human
CTNNB1C0334634Malignant lymphoma, lymphocytic, intermediate differentiation, diffuse1CTD_human
CTNNB1C0345967Malignant mesothelioma1CTD_human
CTNNB1C0376634Craniofacial Abnormalities1CTD_human
CTNNB1C0919267ovarian neoplasm1CTD_human
CTNNB1C3554449MENTAL RETARDATION, AUTOSOMAL DOMINANT 191ORPHANET;UNIPROT
CTNNB1C4277682Chemical and Drug Induced Liver Injury1CTD_human