ExonSkipDB: functional annotation of exon skipping event in human

Gene summary for RTN3

Gene summary

Gene information	Gene symbol	RTN3
	Gene ID	10313
	Gene name	reticulon 3
	Synonyms	ASYIP\|HAP\|NSPL2\|NSPLII\|RTN3-A1
	Cytomap	11q13.1
	Type of gene	protein-coding
	Description	reticulon-3ASY interacting proteinNSP-like protein 2NSP-like protein IIhomolog of ASY proteinneuroendocrine-specific protein-like 2neuroendocrine-specific protein-like II
	Modification date	20180522
	UniProtAcc	O95197
	Context	PubMed: RTN3 [Title/Abstract] AND exon [Title/Abstract] AND skip [Title/Abstract] - Title (PMID)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
RTN3	GO:0071787	endoplasmic reticulum tubular network formation	25612671

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Exon skipping events across known transcript of Ensembl for RTN3 from UCSC genome browser

Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

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Gene isoform structures and expression levels for RTN3

Expression levels of gene isoforms across TCGA.

Expression levels of gene isoforms across GTEx.

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Exon skipping events with PSIs in TCGA for RTN3

Information of exkip skipping event in TCGA.

Exon skip ID	chr	Exons involved in exon skipping	Skipped exon	ENSG	ENSTs
exon_skip_60282	11	63449044:63449250:63472322:63472379:63481442:63481638	63472322:63472379	ENSG00000133318.9	ENST00000338850.5
exon_skip_60283	11	63449044:63449250:63472322:63472379:63486173:63488504	63472322:63472379	ENSG00000133318.9	ENST00000377819.5
exon_skip_60284	11	63449044:63449250:63472322:63472379:63486452:63486661	63472322:63472379	ENSG00000133318.9	ENST00000545432.1
exon_skip_60286	11	63449044:63449250:63472322:63472379:63517462:63517669	63472322:63472379	ENSG00000133318.9	ENST00000356000.3
exon_skip_60290	11	63449044:63449250:63486173:63488504:63517462:63517669	63486173:63488504	ENSG00000133318.9	ENST00000339997.4
exon_skip_60294	11	63449044:63449250:63486452:63488504:63517462:63517669	63486452:63488504	ENSG00000133318.9	ENST00000540798.1
exon_skip_60298	11	63449044:63449250:63514418:63514496:63517462:63517669	63514418:63514496	ENSG00000133318.9	ENST00000542238.1
exon_skip_60301	11	63472322:63472379:63486173:63488504:63517462:63517669	63486173:63488504	ENSG00000133318.9	ENST00000377819.5
exon_skip_60309	11	63517546:63517670:63519978:63520117:63520540:63520610	63519978:63520117	ENSG00000133318.9	ENST00000339997.4,ENST00000540798.1,ENST00000341307.2,ENST00000356000.3,ENST00000377819.5,ENST00000537981.1
exon_skip_60312	11	63517462:63517670:63520540:63520610:63521133:63521180	63520540:63520610	ENSG00000133318.9	ENST00000536011.1
exon_skip_60318	11	63517462:63517670:63523583:63523642:63525627:63525893	63523583:63523642	ENSG00000133318.9	ENST00000354497.4
exon_skip_60320	11	63519978:63520117:63520540:63520610:63521133:63521180	63520540:63520610	ENSG00000133318.9	ENST00000339997.4,ENST00000540798.1,ENST00000341307.2,ENST00000356000.3,ENST00000377819.5,ENST00000537981.1
exon_skip_60324	11	63521152:63521180:63523583:63523642:63525627:63525893	63523583:63523642	ENSG00000133318.9	ENST00000339997.4,ENST00000540798.1,ENST00000356000.3,ENST00000377819.5,ENST00000537981.1

PSI values of skipped exons in TCGA.

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Exon skipping events with PSIs in GTEx for RTN3

Information of exkip skipping event in GTEx

Exon skip ID	chr	Exons involved in exon skipping	Skipped exon	ENSG	ENSTs
exon_skip_60282	11	63449044:63449250:63472322:63472379:63481442:63481638	63472322:63472379	ENSG00000133318.9	ENST00000338850.5
exon_skip_60283	11	63449044:63449250:63472322:63472379:63486173:63488504	63472322:63472379	ENSG00000133318.9	ENST00000377819.5
exon_skip_60284	11	63449044:63449250:63472322:63472379:63486452:63486661	63472322:63472379	ENSG00000133318.9	ENST00000545432.1
exon_skip_60286	11	63449044:63449250:63472322:63472379:63517462:63517669	63472322:63472379	ENSG00000133318.9	ENST00000356000.3
exon_skip_60290	11	63449044:63449250:63486173:63488504:63517462:63517669	63486173:63488504	ENSG00000133318.9	ENST00000339997.4
exon_skip_60294	11	63449044:63449250:63486452:63488504:63517462:63517669	63486452:63488504	ENSG00000133318.9	ENST00000540798.1
exon_skip_60298	11	63449044:63449250:63514418:63514496:63517462:63517669	63514418:63514496	ENSG00000133318.9	ENST00000542238.1
exon_skip_60301	11	63472322:63472379:63486173:63488504:63517462:63517669	63486173:63488504	ENSG00000133318.9	ENST00000377819.5
exon_skip_60309	11	63517546:63517670:63519978:63520117:63520540:63520610	63519978:63520117	ENSG00000133318.9	ENST00000341307.2,ENST00000356000.3,ENST00000377819.5,ENST00000339997.4,ENST00000540798.1,ENST00000537981.1
exon_skip_60312	11	63517462:63517670:63520540:63520610:63521133:63521180	63520540:63520610	ENSG00000133318.9	ENST00000536011.1
exon_skip_60318	11	63517462:63517670:63523583:63523642:63525627:63525893	63523583:63523642	ENSG00000133318.9	ENST00000354497.4
exon_skip_60320	11	63519978:63520117:63520540:63520610:63521133:63521180	63520540:63520610	ENSG00000133318.9	ENST00000341307.2,ENST00000356000.3,ENST00000377819.5,ENST00000339997.4,ENST00000540798.1,ENST00000537981.1
exon_skip_60324	11	63521152:63521180:63523583:63523642:63525627:63525893	63523583:63523642	ENSG00000133318.9	ENST00000356000.3,ENST00000377819.5,ENST00000339997.4,ENST00000540798.1,ENST00000537981.1

PSI values of skipped exons in GTEx.

* Skipped exon sequences.

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Open reading frame (ORF) annotation in the exon skipping event for RTN3

Open reading frame (ORF) of individual exon skipping events in TCGA based on the Ensembl gene structure combined from isoforms.

ENST	Start of skipped exon	End of skipped exon	ORF
ENST00000377819	63519978	63520117	Frame-shift
ENST00000377819	63520540	63520610	Frame-shift
ENST00000377819	63523583	63523642	Frame-shift
ENST00000377819	63472322	63472379	In-frame
ENST00000377819	63486173	63488504	In-frame

Open reading frame (ORF) of individual exon skipping events in GTEx based on the Ensembl gene structure combined from isoforms.

ENST	Start of skipped exon	End of skipped exon	ORF
ENST00000377819	63519978	63520117	Frame-shift
ENST00000377819	63520540	63520610	Frame-shift
ENST00000377819	63523583	63523642	Frame-shift
ENST00000377819	63472322	63472379	In-frame
ENST00000377819	63486173	63488504	In-frame

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Infer the effects of exon skipping event on protein functional features for RTN3

Exon skipping at the protein sequence level and followed lost functional features.
* Click on the image to enlarge it in a new window.

Loci of skipped exons in TCGA across genomic, transcript, and protein sequence levels of In-frame cases.

ENST	Length of mRNA	Length of AA seq.	Genomic start	Genomic end	mRNA start	mRNA end	AA start	AA end
ENST00000377819	4954	1032	63472322	63472379	297	353	47	66
ENST00000377819	4954	1032	63486173	63488504	354	2684	66	843

Loci of skipped exons in GTEx across genomic, transcript, and protein sequence levels of In-frame cases.

ENST	Length of mRNA	Length of AA seq.	Genomic start	Genomic end	mRNA start	mRNA end	AA start	AA end
ENST00000377819	4954	1032	63472322	63472379	297	353	47	66
ENST00000377819	4954	1032	63486173	63488504	354	2684	66	843

Lost protein functional features of individual exon skipping events in TCGA.

UniProt acc.

Start of exon skipping (AA)

End of exon skipping (AA)

Protein feature start (AA)

Protein feature end (AA)

Category of protein feature

Description of feature

Lost protein functional features of individual exon skipping events in GTEx.

UniProt acc.

Start of exon skipping (AA)

End of exon skipping (AA)

Protein feature start (AA)

Protein feature end (AA)

Category of protein feature

Description of feature

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SNVs in the skipped exons for RTN3

- Lollipop plot for presenting exon skipping associated SNVs.
* Click on the image to enlarge it in a new window.

- Differential PSIs between mutated versus non-mutated samples.

RTN3_BRCA_exon_skip_60294_psi_boxplot.png
boxplot

RTN3_HNSC_exon_skip_60294_psi_boxplot.png
boxplot

RTN3_LIHC_exon_skip_60294_psi_boxplot.png
boxplot

RTN3_STAD_exon_skip_60294_psi_boxplot.png
boxplot

RTN3_TGCT_exon_skip_60294_psi_boxplot.png
boxplot

- Non-synonymous mutations located in the skipped exons in TCGA.

Cancer type	Sample	ESID	Skipped exon start	Skipped exon end	Mutation start	Mutation end	Mutation type	Reference seq	Mutation seq	AAchange
LIHC	TCGA-G3-A3CJ-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63486282	63486282	Frame_Shift_Del	A	-	p.E103fs
LIHC	TCGA-DD-A3A0-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63486693	63486693	Frame_Shift_Del	A	-	p.E240fs
LIHC	TCGA-DD-A3A0-01	exon_skip_60294	63486453	63488504	63486693	63486693	Frame_Shift_Del	A	-	p.E240fs
LIHC	TCGA-DD-A3A0-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63486787	63486787	Frame_Shift_Del	T	-	p.D271fs
LIHC	TCGA-DD-A3A0-01	exon_skip_60294	63486453	63488504	63486787	63486787	Frame_Shift_Del	T	-	p.D271fs
STAD	TCGA-HU-A4H3-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63486964	63486967	Frame_Shift_Del	TGAT	-	p.330_331del
STAD	TCGA-HU-A4H3-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63486964	63486967	Frame_Shift_Del	TGAT	-	p.N330fs
STAD	TCGA-HU-A4H3-01	exon_skip_60294	63486453	63488504	63486964	63486967	Frame_Shift_Del	TGAT	-	p.330_331del
STAD	TCGA-HU-A4H3-01	exon_skip_60294	63486453	63488504	63486964	63486967	Frame_Shift_Del	TGAT	-	p.N330fs
LIHC	TCGA-DD-A39Y-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63487019	63487019	Frame_Shift_Del	A	-	p.K349fs
LIHC	TCGA-DD-A39Y-01	exon_skip_60294	63486453	63488504	63487019	63487019	Frame_Shift_Del	A	-	p.K349fs
STAD	TCGA-CG-5723-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63487620	63487620	Frame_Shift_Del	A	-	p.E549fs
STAD	TCGA-CG-5723-01	exon_skip_60294	63486453	63488504	63487620	63487620	Frame_Shift_Del	A	-	p.E549fs
LIHC	TCGA-DD-A39Y-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63487802	63487802	Frame_Shift_Del	A	-	p.K610fs
LIHC	TCGA-DD-A39Y-01	exon_skip_60294	63486453	63488504	63487802	63487802	Frame_Shift_Del	A	-	p.K610fs
BRCA	TCGA-E9-A22E-01	exon_skip_60318 exon_skip_60324	63523584	63523642	63523641	63523644	Frame_Shift_Del	AAGT	-	p.K999fs
BLCA	TCGA-G2-AA3F-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63486281	63486282	Frame_Shift_Ins	-	A	p.E103fs
STAD	TCGA-BR-4201-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63488463	63488464	Frame_Shift_Ins	-	A	p.V830fs
STAD	TCGA-BR-4201-01	exon_skip_60294	63486453	63488504	63488463	63488464	Frame_Shift_Ins	-	A	p.V830fs
STAD	TCGA-BR-4201-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63488464	63488465	Frame_Shift_Ins	-	A	p.V830fs
STAD	TCGA-BR-4201-01	exon_skip_60294	63486453	63488504	63488464	63488465	Frame_Shift_Ins	-	A	p.V830fs
BRCA	TCGA-AR-A0TX-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63486546	63486546	Nonsense_Mutation	C	A	p.S172*
BRCA	TCGA-AR-A0TX-01	exon_skip_60294	63486453	63488504	63486546	63486546	Nonsense_Mutation	C	A	p.S172*
BLCA	TCGA-DK-A2I4-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63486765	63486765	Nonsense_Mutation	C	G	p.S264*
BLCA	TCGA-DK-A2I4-01	exon_skip_60294	63486453	63488504	63486765	63486765	Nonsense_Mutation	C	G	p.S264*
UCEC	TCGA-AX-A0J0-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63487586	63487586	Nonsense_Mutation	G	T	p.E519*
UCEC	TCGA-AX-A0J0-01	exon_skip_60294	63486453	63488504	63487586	63487586	Nonsense_Mutation	G	T	p.E519*
HNSC	TCGA-CR-6472-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63487851	63487851	Nonsense_Mutation	C	A	p.S626*
HNSC	TCGA-CR-6472-01	exon_skip_60294	63486453	63488504	63487851	63487851	Nonsense_Mutation	C	A	p.S626*
TGCT	TCGA-2G-AAFH-01	exon_skip_60290 exon_skip_60301	63486174	63488504	63488321	63488321	Nonsense_Mutation	G	T	p.E783*
TGCT	TCGA-2G-AAFH-01	exon_skip_60294	63486453	63488504	63488321	63488321	Nonsense_Mutation	G	T	p.E783*
UCEC	TCGA-D1-A17Q-01	exon_skip_60284 exon_skip_60286 exon_skip_60282 exon_skip_60283	63472323	63472379	63472322	63472322	Splice_Site	G	T	e2-1

- Depth of coverage in the three exons composing exon skipping event

Depth of coverage in three exons	Mutation description
	Sample: TCGA-AR-A0TX-01
	Cancer type: BRCA
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63486546
	Mutation end: 63486546
	Mutation type: Nonsense_Mutation
	Reference seq: C
	Mutation seq: A
	AAchange: p.S172*
	Sample: TCGA-AR-A0TX-01
	Cancer type: BRCA
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63486546
	Mutation end: 63486546
	Mutation type: Nonsense_Mutation
	Reference seq: C
	Mutation seq: A
	AAchange: p.S172*
exon_skip_60290_BRCA_TCGA-AR-A0TX-01.png
exon_skip_60294_BRCA_TCGA-AR-A0TX-01.png
	Sample: TCGA-CR-6472-01
	Cancer type: HNSC
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63487851
	Mutation end: 63487851
	Mutation type: Nonsense_Mutation
	Reference seq: C
	Mutation seq: A
	AAchange: p.S626*
	Sample: TCGA-CR-6472-01
	Cancer type: HNSC
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63487851
	Mutation end: 63487851
	Mutation type: Nonsense_Mutation
	Reference seq: C
	Mutation seq: A
	AAchange: p.S626*
exon_skip_60290_HNSC_TCGA-CR-6472-01.png
exon_skip_60294_HNSC_TCGA-CR-6472-01.png
	Sample: TCGA-2G-AAFH-01
	Cancer type: TGCT
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63488321
	Mutation end: 63488321
	Mutation type: Nonsense_Mutation
	Reference seq: G
	Mutation seq: T
	AAchange: p.E783*
	Sample: TCGA-2G-AAFH-01
	Cancer type: TGCT
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63488321
	Mutation end: 63488321
	Mutation type: Nonsense_Mutation
	Reference seq: G
	Mutation seq: T
	AAchange: p.E783*
exon_skip_60290_TGCT_TCGA-2G-AAFH-01.png
exon_skip_60294_TGCT_TCGA-2G-AAFH-01.png
	Sample: TCGA-AX-A0J0-01
	Cancer type: UCEC
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63487586
	Mutation end: 63487586
	Mutation type: Nonsense_Mutation
	Reference seq: G
	Mutation seq: T
	AAchange: p.E519*
	Sample: TCGA-AX-A0J0-01
	Cancer type: UCEC
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63487586
	Mutation end: 63487586
	Mutation type: Nonsense_Mutation
	Reference seq: G
	Mutation seq: T
	AAchange: p.E519*
exon_skip_114672_UCEC_TCGA-AX-A0J0-01.png
exon_skip_145114_UCEC_TCGA-AX-A0J0-01.png
exon_skip_148176_UCEC_TCGA-AX-A0J0-01.png
exon_skip_148178_UCEC_TCGA-AX-A0J0-01.png
exon_skip_26303_UCEC_TCGA-AX-A0J0-01.png
exon_skip_316320_UCEC_TCGA-AX-A0J0-01.png
exon_skip_366628_UCEC_TCGA-AX-A0J0-01.png
exon_skip_422781_UCEC_TCGA-AX-A0J0-01.png
exon_skip_440271_UCEC_TCGA-AX-A0J0-01.png
exon_skip_47562_UCEC_TCGA-AX-A0J0-01.png
exon_skip_500520_UCEC_TCGA-AX-A0J0-01.png
exon_skip_60290_UCEC_TCGA-AX-A0J0-01.png
exon_skip_60294_UCEC_TCGA-AX-A0J0-01.png
	Sample: TCGA-DD-A39Y-01
	Cancer type: LIHC
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63487019
	Mutation end: 63487019
	Mutation type: Frame_Shift_Del
	Reference seq: A
	Mutation seq: -
	AAchange: p.K349fs
	Sample: TCGA-DD-A39Y-01
	Cancer type: LIHC
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63487019
	Mutation end: 63487019
	Mutation type: Frame_Shift_Del
	Reference seq: A
	Mutation seq: -
	AAchange: p.K349fs
	Sample: TCGA-DD-A39Y-01
	Cancer type: LIHC
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63487802
	Mutation end: 63487802
	Mutation type: Frame_Shift_Del
	Reference seq: A
	Mutation seq: -
	AAchange: p.K610fs
	Sample: TCGA-DD-A39Y-01
	Cancer type: LIHC
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63487802
	Mutation end: 63487802
	Mutation type: Frame_Shift_Del
	Reference seq: A
	Mutation seq: -
	AAchange: p.K610fs
exon_skip_105023_LIHC_TCGA-DD-A39Y-01.png
exon_skip_101824_LIHC_TCGA-DD-A39Y-01.png
exon_skip_106032_LIHC_TCGA-DD-A39Y-01.png
exon_skip_106378_LIHC_TCGA-DD-A39Y-01.png
exon_skip_106523_LIHC_TCGA-DD-A39Y-01.png
exon_skip_106524_LIHC_TCGA-DD-A39Y-01.png
exon_skip_109527_LIHC_TCGA-DD-A39Y-01.png
exon_skip_109529_LIHC_TCGA-DD-A39Y-01.png
exon_skip_110000_LIHC_TCGA-DD-A39Y-01.png
exon_skip_11029_LIHC_TCGA-DD-A39Y-01.png
exon_skip_111893_LIHC_TCGA-DD-A39Y-01.png
exon_skip_111894_LIHC_TCGA-DD-A39Y-01.png
exon_skip_112042_LIHC_TCGA-DD-A39Y-01.png
exon_skip_112647_LIHC_TCGA-DD-A39Y-01.png
exon_skip_114045_LIHC_TCGA-DD-A39Y-01.png
exon_skip_114046_LIHC_TCGA-DD-A39Y-01.png
exon_skip_114565_LIHC_TCGA-DD-A39Y-01.png
exon_skip_11916_LIHC_TCGA-DD-A39Y-01.png
exon_skip_1234_LIHC_TCGA-DD-A39Y-01.png
exon_skip_1237_LIHC_TCGA-DD-A39Y-01.png
exon_skip_124639_LIHC_TCGA-DD-A39Y-01.png
exon_skip_124693_LIHC_TCGA-DD-A39Y-01.png
exon_skip_124695_LIHC_TCGA-DD-A39Y-01.png
exon_skip_130535_LIHC_TCGA-DD-A39Y-01.png
exon_skip_13071_LIHC_TCGA-DD-A39Y-01.png
exon_skip_131505_LIHC_TCGA-DD-A39Y-01.png
exon_skip_133556_LIHC_TCGA-DD-A39Y-01.png
exon_skip_135211_LIHC_TCGA-DD-A39Y-01.png
exon_skip_135545_LIHC_TCGA-DD-A39Y-01.png
exon_skip_135553_LIHC_TCGA-DD-A39Y-01.png
exon_skip_135763_LIHC_TCGA-DD-A39Y-01.png
exon_skip_137564_LIHC_TCGA-DD-A39Y-01.png
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	Sample: TCGA-BR-4201-01
	Cancer type: STAD
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63488463
	Mutation end: 63488464
	Mutation type: Frame_Shift_Ins
	Reference seq: -
	Mutation seq: A
	AAchange: p.V830fs
	Sample: TCGA-BR-4201-01
	Cancer type: STAD
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63488463
	Mutation end: 63488464
	Mutation type: Frame_Shift_Ins
	Reference seq: -
	Mutation seq: A
	AAchange: p.V830fs
	Sample: TCGA-BR-4201-01
	Cancer type: STAD
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63488464
	Mutation end: 63488465
	Mutation type: Frame_Shift_Ins
	Reference seq: -
	Mutation seq: A
	AAchange: p.V830fs
	Sample: TCGA-BR-4201-01
	Cancer type: STAD
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63488464
	Mutation end: 63488465
	Mutation type: Frame_Shift_Ins
	Reference seq: -
	Mutation seq: A
	AAchange: p.V830fs
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exon_skip_45525_STAD_TCGA-BR-4201-01.png
exon_skip_456626_STAD_TCGA-BR-4201-01.png
exon_skip_494729_STAD_TCGA-BR-4201-01.png
exon_skip_60290_STAD_TCGA-BR-4201-01.png
exon_skip_60294_STAD_TCGA-BR-4201-01.png
	Sample: TCGA-HU-A4H3-01
	Cancer type: STAD
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63486964
	Mutation end: 63486967
	Mutation type: Frame_Shift_Del
	Reference seq: TGAT
	Mutation seq: -
	AAchange: p.330_331del
	Sample: TCGA-HU-A4H3-01
	Cancer type: STAD
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63486964
	Mutation end: 63486967
	Mutation type: Frame_Shift_Del
	Reference seq: TGAT
	Mutation seq: -
	AAchange: p.330_331del
	Sample: TCGA-HU-A4H3-01
	Cancer type: STAD
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63486964
	Mutation end: 63486967
	Mutation type: Frame_Shift_Del
	Reference seq: TGAT
	Mutation seq: -
	AAchange: p.N330fs
	Sample: TCGA-HU-A4H3-01
	Cancer type: STAD
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63486964
	Mutation end: 63486967
	Mutation type: Frame_Shift_Del
	Reference seq: TGAT
	Mutation seq: -
	AAchange: p.N330fs
exon_skip_101895_STAD_TCGA-HU-A4H3-01.png
exon_skip_101900_STAD_TCGA-HU-A4H3-01.png
exon_skip_134053_STAD_TCGA-HU-A4H3-01.png
exon_skip_142361_STAD_TCGA-HU-A4H3-01.png
exon_skip_21488_STAD_TCGA-HU-A4H3-01.png
exon_skip_286384_STAD_TCGA-HU-A4H3-01.png
exon_skip_299738_STAD_TCGA-HU-A4H3-01.png
exon_skip_307491_STAD_TCGA-HU-A4H3-01.png
exon_skip_308974_STAD_TCGA-HU-A4H3-01.png
exon_skip_308983_STAD_TCGA-HU-A4H3-01.png
exon_skip_312995_STAD_TCGA-HU-A4H3-01.png
exon_skip_320688_STAD_TCGA-HU-A4H3-01.png
exon_skip_320689_STAD_TCGA-HU-A4H3-01.png
exon_skip_320690_STAD_TCGA-HU-A4H3-01.png
exon_skip_328488_STAD_TCGA-HU-A4H3-01.png
exon_skip_330511_STAD_TCGA-HU-A4H3-01.png
exon_skip_450406_STAD_TCGA-HU-A4H3-01.png
exon_skip_60290_STAD_TCGA-HU-A4H3-01.png
exon_skip_60294_STAD_TCGA-HU-A4H3-01.png
exon_skip_69561_STAD_TCGA-HU-A4H3-01.png
exon_skip_74347_STAD_TCGA-HU-A4H3-01.png
exon_skip_8059_STAD_TCGA-HU-A4H3-01.png
	Sample: TCGA-CG-5723-01
	Cancer type: STAD
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63487620
	Mutation end: 63487620
	Mutation type: Frame_Shift_Del
	Reference seq: A
	Mutation seq: -
	AAchange: p.E549fs
	Sample: TCGA-CG-5723-01
	Cancer type: STAD
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63487620
	Mutation end: 63487620
	Mutation type: Frame_Shift_Del
	Reference seq: A
	Mutation seq: -
	AAchange: p.E549fs
exon_skip_101055_STAD_TCGA-CG-5723-01.png
exon_skip_135181_STAD_TCGA-CG-5723-01.png
exon_skip_143805_STAD_TCGA-CG-5723-01.png
exon_skip_287270_STAD_TCGA-CG-5723-01.png
exon_skip_325884_STAD_TCGA-CG-5723-01.png
exon_skip_352908_STAD_TCGA-CG-5723-01.png
exon_skip_353222_STAD_TCGA-CG-5723-01.png
exon_skip_356108_STAD_TCGA-CG-5723-01.png
exon_skip_381180_STAD_TCGA-CG-5723-01.png
exon_skip_42584_STAD_TCGA-CG-5723-01.png
exon_skip_447822_STAD_TCGA-CG-5723-01.png
exon_skip_53674_STAD_TCGA-CG-5723-01.png
exon_skip_60290_STAD_TCGA-CG-5723-01.png
exon_skip_60294_STAD_TCGA-CG-5723-01.png
exon_skip_71774_STAD_TCGA-CG-5723-01.png
exon_skip_78894_STAD_TCGA-CG-5723-01.png
exon_skip_84515_STAD_TCGA-CG-5723-01.png
exon_skip_92488_STAD_TCGA-CG-5723-01.png
	Sample: TCGA-AR-A0TX-01
	Cancer type: BRCA
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63486546
	Mutation end: 63486546
	Mutation type: Nonsense_Mutation
	Reference seq: C
	Mutation seq: A
	AAchange: p.S172*
	Sample: TCGA-AR-A0TX-01
	Cancer type: BRCA
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63486546
	Mutation end: 63486546
	Mutation type: Nonsense_Mutation
	Reference seq: C
	Mutation seq: A
	AAchange: p.S172*
exon_skip_60290_BRCA_TCGA-AR-A0TX-01.png
exon_skip_60294_BRCA_TCGA-AR-A0TX-01.png
	Sample: TCGA-CR-6472-01
	Cancer type: HNSC
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63487851
	Mutation end: 63487851
	Mutation type: Nonsense_Mutation
	Reference seq: C
	Mutation seq: A
	AAchange: p.S626*
	Sample: TCGA-CR-6472-01
	Cancer type: HNSC
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63487851
	Mutation end: 63487851
	Mutation type: Nonsense_Mutation
	Reference seq: C
	Mutation seq: A
	AAchange: p.S626*
exon_skip_60290_HNSC_TCGA-CR-6472-01.png
exon_skip_60294_HNSC_TCGA-CR-6472-01.png
	Sample: TCGA-2G-AAFH-01
	Cancer type: TGCT
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63488321
	Mutation end: 63488321
	Mutation type: Nonsense_Mutation
	Reference seq: G
	Mutation seq: T
	AAchange: p.E783*
	Sample: TCGA-2G-AAFH-01
	Cancer type: TGCT
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63488321
	Mutation end: 63488321
	Mutation type: Nonsense_Mutation
	Reference seq: G
	Mutation seq: T
	AAchange: p.E783*
exon_skip_60290_TGCT_TCGA-2G-AAFH-01.png
exon_skip_60294_TGCT_TCGA-2G-AAFH-01.png
	Sample: TCGA-AX-A0J0-01
	Cancer type: UCEC
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63487586
	Mutation end: 63487586
	Mutation type: Nonsense_Mutation
	Reference seq: G
	Mutation seq: T
	AAchange: p.E519*
	Sample: TCGA-AX-A0J0-01
	Cancer type: UCEC
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63487586
	Mutation end: 63487586
	Mutation type: Nonsense_Mutation
	Reference seq: G
	Mutation seq: T
	AAchange: p.E519*
exon_skip_114672_UCEC_TCGA-AX-A0J0-01.png
exon_skip_145114_UCEC_TCGA-AX-A0J0-01.png
exon_skip_148176_UCEC_TCGA-AX-A0J0-01.png
exon_skip_148178_UCEC_TCGA-AX-A0J0-01.png
exon_skip_26303_UCEC_TCGA-AX-A0J0-01.png
exon_skip_316320_UCEC_TCGA-AX-A0J0-01.png
exon_skip_366628_UCEC_TCGA-AX-A0J0-01.png
exon_skip_422781_UCEC_TCGA-AX-A0J0-01.png
exon_skip_440271_UCEC_TCGA-AX-A0J0-01.png
exon_skip_47562_UCEC_TCGA-AX-A0J0-01.png
exon_skip_500520_UCEC_TCGA-AX-A0J0-01.png
exon_skip_60290_UCEC_TCGA-AX-A0J0-01.png
exon_skip_60294_UCEC_TCGA-AX-A0J0-01.png
	Sample: TCGA-DD-A39Y-01
	Cancer type: LIHC
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63487019
	Mutation end: 63487019
	Mutation type: Frame_Shift_Del
	Reference seq: A
	Mutation seq: -
	AAchange: p.K349fs
	Sample: TCGA-DD-A39Y-01
	Cancer type: LIHC
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63487019
	Mutation end: 63487019
	Mutation type: Frame_Shift_Del
	Reference seq: A
	Mutation seq: -
	AAchange: p.K349fs
	Sample: TCGA-DD-A39Y-01
	Cancer type: LIHC
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63487802
	Mutation end: 63487802
	Mutation type: Frame_Shift_Del
	Reference seq: A
	Mutation seq: -
	AAchange: p.K610fs
	Sample: TCGA-DD-A39Y-01
	Cancer type: LIHC
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63487802
	Mutation end: 63487802
	Mutation type: Frame_Shift_Del
	Reference seq: A
	Mutation seq: -
	AAchange: p.K610fs
exon_skip_105023_LIHC_TCGA-DD-A39Y-01.png
exon_skip_101824_LIHC_TCGA-DD-A39Y-01.png
exon_skip_106032_LIHC_TCGA-DD-A39Y-01.png
exon_skip_106378_LIHC_TCGA-DD-A39Y-01.png
exon_skip_106523_LIHC_TCGA-DD-A39Y-01.png
exon_skip_106524_LIHC_TCGA-DD-A39Y-01.png
exon_skip_109527_LIHC_TCGA-DD-A39Y-01.png
exon_skip_109529_LIHC_TCGA-DD-A39Y-01.png
exon_skip_110000_LIHC_TCGA-DD-A39Y-01.png
exon_skip_11029_LIHC_TCGA-DD-A39Y-01.png
exon_skip_111893_LIHC_TCGA-DD-A39Y-01.png
exon_skip_111894_LIHC_TCGA-DD-A39Y-01.png
exon_skip_112042_LIHC_TCGA-DD-A39Y-01.png
exon_skip_112647_LIHC_TCGA-DD-A39Y-01.png
exon_skip_114045_LIHC_TCGA-DD-A39Y-01.png
exon_skip_114046_LIHC_TCGA-DD-A39Y-01.png
exon_skip_114565_LIHC_TCGA-DD-A39Y-01.png
exon_skip_11916_LIHC_TCGA-DD-A39Y-01.png
exon_skip_1234_LIHC_TCGA-DD-A39Y-01.png
exon_skip_1237_LIHC_TCGA-DD-A39Y-01.png
exon_skip_124639_LIHC_TCGA-DD-A39Y-01.png
exon_skip_124693_LIHC_TCGA-DD-A39Y-01.png
exon_skip_124695_LIHC_TCGA-DD-A39Y-01.png
exon_skip_130535_LIHC_TCGA-DD-A39Y-01.png
exon_skip_13071_LIHC_TCGA-DD-A39Y-01.png
exon_skip_131505_LIHC_TCGA-DD-A39Y-01.png
exon_skip_133556_LIHC_TCGA-DD-A39Y-01.png
exon_skip_135211_LIHC_TCGA-DD-A39Y-01.png
exon_skip_135545_LIHC_TCGA-DD-A39Y-01.png
exon_skip_135553_LIHC_TCGA-DD-A39Y-01.png
exon_skip_135763_LIHC_TCGA-DD-A39Y-01.png
exon_skip_137564_LIHC_TCGA-DD-A39Y-01.png
exon_skip_138947_LIHC_TCGA-DD-A39Y-01.png
exon_skip_139222_LIHC_TCGA-DD-A39Y-01.png
exon_skip_141370_LIHC_TCGA-DD-A39Y-01.png
exon_skip_141945_LIHC_TCGA-DD-A39Y-01.png
exon_skip_143515_LIHC_TCGA-DD-A39Y-01.png
exon_skip_143728_LIHC_TCGA-DD-A39Y-01.png
exon_skip_14772_LIHC_TCGA-DD-A39Y-01.png
exon_skip_148319_LIHC_TCGA-DD-A39Y-01.png
exon_skip_148332_LIHC_TCGA-DD-A39Y-01.png
exon_skip_14897_LIHC_TCGA-DD-A39Y-01.png
exon_skip_150985_LIHC_TCGA-DD-A39Y-01.png
exon_skip_151979_LIHC_TCGA-DD-A39Y-01.png
exon_skip_153387_LIHC_TCGA-DD-A39Y-01.png
exon_skip_153494_LIHC_TCGA-DD-A39Y-01.png
exon_skip_153786_LIHC_TCGA-DD-A39Y-01.png
exon_skip_155021_LIHC_TCGA-DD-A39Y-01.png
exon_skip_155962_LIHC_TCGA-DD-A39Y-01.png
exon_skip_155964_LIHC_TCGA-DD-A39Y-01.png
exon_skip_19897_LIHC_TCGA-DD-A39Y-01.png
exon_skip_19898_LIHC_TCGA-DD-A39Y-01.png
exon_skip_19902_LIHC_TCGA-DD-A39Y-01.png
exon_skip_20050_LIHC_TCGA-DD-A39Y-01.png
exon_skip_20053_LIHC_TCGA-DD-A39Y-01.png
exon_skip_21823_LIHC_TCGA-DD-A39Y-01.png
exon_skip_22411_LIHC_TCGA-DD-A39Y-01.png
exon_skip_22908_LIHC_TCGA-DD-A39Y-01.png
exon_skip_23470_LIHC_TCGA-DD-A39Y-01.png
exon_skip_24870_LIHC_TCGA-DD-A39Y-01.png
exon_skip_25336_LIHC_TCGA-DD-A39Y-01.png
exon_skip_26316_LIHC_TCGA-DD-A39Y-01.png
exon_skip_26461_LIHC_TCGA-DD-A39Y-01.png
exon_skip_26958_LIHC_TCGA-DD-A39Y-01.png
exon_skip_27038_LIHC_TCGA-DD-A39Y-01.png
exon_skip_27415_LIHC_TCGA-DD-A39Y-01.png
exon_skip_283977_LIHC_TCGA-DD-A39Y-01.png
exon_skip_284046_LIHC_TCGA-DD-A39Y-01.png
exon_skip_289275_LIHC_TCGA-DD-A39Y-01.png
exon_skip_291046_LIHC_TCGA-DD-A39Y-01.png
exon_skip_291218_LIHC_TCGA-DD-A39Y-01.png
exon_skip_291361_LIHC_TCGA-DD-A39Y-01.png
exon_skip_292293_LIHC_TCGA-DD-A39Y-01.png
exon_skip_292562_LIHC_TCGA-DD-A39Y-01.png
exon_skip_293040_LIHC_TCGA-DD-A39Y-01.png
exon_skip_293045_LIHC_TCGA-DD-A39Y-01.png
exon_skip_293052_LIHC_TCGA-DD-A39Y-01.png
exon_skip_293118_LIHC_TCGA-DD-A39Y-01.png
exon_skip_293546_LIHC_TCGA-DD-A39Y-01.png
exon_skip_293549_LIHC_TCGA-DD-A39Y-01.png
exon_skip_294064_LIHC_TCGA-DD-A39Y-01.png
exon_skip_294067_LIHC_TCGA-DD-A39Y-01.png
exon_skip_29565_LIHC_TCGA-DD-A39Y-01.png
exon_skip_29733_LIHC_TCGA-DD-A39Y-01.png
exon_skip_299242_LIHC_TCGA-DD-A39Y-01.png
exon_skip_299287_LIHC_TCGA-DD-A39Y-01.png
exon_skip_299304_LIHC_TCGA-DD-A39Y-01.png
exon_skip_299306_LIHC_TCGA-DD-A39Y-01.png
exon_skip_299307_LIHC_TCGA-DD-A39Y-01.png
exon_skip_30001_LIHC_TCGA-DD-A39Y-01.png
exon_skip_300924_LIHC_TCGA-DD-A39Y-01.png
exon_skip_301267_LIHC_TCGA-DD-A39Y-01.png
exon_skip_301272_LIHC_TCGA-DD-A39Y-01.png
exon_skip_302090_LIHC_TCGA-DD-A39Y-01.png
exon_skip_302094_LIHC_TCGA-DD-A39Y-01.png
exon_skip_302095_LIHC_TCGA-DD-A39Y-01.png
exon_skip_302097_LIHC_TCGA-DD-A39Y-01.png
exon_skip_3064_LIHC_TCGA-DD-A39Y-01.png
exon_skip_306549_LIHC_TCGA-DD-A39Y-01.png
exon_skip_30744_LIHC_TCGA-DD-A39Y-01.png
exon_skip_309425_LIHC_TCGA-DD-A39Y-01.png
exon_skip_310969_LIHC_TCGA-DD-A39Y-01.png
exon_skip_311352_LIHC_TCGA-DD-A39Y-01.png
exon_skip_313264_LIHC_TCGA-DD-A39Y-01.png
exon_skip_313342_LIHC_TCGA-DD-A39Y-01.png
exon_skip_313654_LIHC_TCGA-DD-A39Y-01.png
exon_skip_315571_LIHC_TCGA-DD-A39Y-01.png
exon_skip_315574_LIHC_TCGA-DD-A39Y-01.png
exon_skip_316800_LIHC_TCGA-DD-A39Y-01.png
exon_skip_316803_LIHC_TCGA-DD-A39Y-01.png
exon_skip_31730_LIHC_TCGA-DD-A39Y-01.png
exon_skip_317832_LIHC_TCGA-DD-A39Y-01.png
exon_skip_319816_LIHC_TCGA-DD-A39Y-01.png
exon_skip_320714_LIHC_TCGA-DD-A39Y-01.png
exon_skip_320715_LIHC_TCGA-DD-A39Y-01.png
exon_skip_320801LIHC_TCGA-DD-A39Y-01.png
exon_skip_320805_LIHC_TCGA-DD-A39Y-01.png
exon_skip_321225_LIHC_TCGA-DD-A39Y-01.png
exon_skip_323910_LIHC_TCGA-DD-A39Y-01.png
exon_skip_32899_LIHC_TCGA-DD-A39Y-01.png
exon_skip_329221_LIHC_TCGA-DD-A39Y-01.png
exon_skip_331329_LIHC_TCGA-DD-A39Y-01.png
exon_skip_331444_LIHC_TCGA-DD-A39Y-01.png
exon_skip_332241_LIHC_TCGA-DD-A39Y-01.png
exon_skip_334248_LIHC_TCGA-DD-A39Y-01.png
exon_skip_335284_LIHC_TCGA-DD-A39Y-01.png
exon_skip_337247_LIHC_TCGA-DD-A39Y-01.png
exon_skip_34018_LIHC_TCGA-DD-A39Y-01.png
exon_skip_340419_LIHC_TCGA-DD-A39Y-01.png
exon_skip_34444_LIHC_TCGA-DD-A39Y-01.png
exon_skip_34446_LIHC_TCGA-DD-A39Y-01.png
exon_skip_346508_LIHC_TCGA-DD-A39Y-01.png
exon_skip_346721_LIHC_TCGA-DD-A39Y-01.png
exon_skip_346953_LIHC_TCGA-DD-A39Y-01.png
exon_skip_350661_LIHC_TCGA-DD-A39Y-01.png
exon_skip_352716_LIHC_TCGA-DD-A39Y-01.png
exon_skip_35400_LIHC_TCGA-DD-A39Y-01.png
exon_skip_354396_LIHC_TCGA-DD-A39Y-01.png
exon_skip_359435_LIHC_TCGA-DD-A39Y-01.png
exon_skip_360259_LIHC_TCGA-DD-A39Y-01.png
exon_skip_360261_LIHC_TCGA-DD-A39Y-01.png
exon_skip_360316_LIHC_TCGA-DD-A39Y-01.png
exon_skip_361235_LIHC_TCGA-DD-A39Y-01.png
exon_skip_364697_LIHC_TCGA-DD-A39Y-01.png
exon_skip_365330_LIHC_TCGA-DD-A39Y-01.png
exon_skip_369483_LIHC_TCGA-DD-A39Y-01.png
exon_skip_369915_LIHC_TCGA-DD-A39Y-01.png
exon_skip_371550_LIHC_TCGA-DD-A39Y-01.png
exon_skip_371589_LIHC_TCGA-DD-A39Y-01.png
exon_skip_374387_LIHC_TCGA-DD-A39Y-01.png
exon_skip_374402_LIHC_TCGA-DD-A39Y-01.png
exon_skip_37475_LIHC_TCGA-DD-A39Y-01.png
exon_skip_37491_LIHC_TCGA-DD-A39Y-01.png
exon_skip_374945_LIHC_TCGA-DD-A39Y-01.png
exon_skip_375131_LIHC_TCGA-DD-A39Y-01.png
exon_skip_375133_LIHC_TCGA-DD-A39Y-01.png
exon_skip_375393_LIHC_TCGA-DD-A39Y-01.png
exon_skip_376191_LIHC_TCGA-DD-A39Y-01.png
exon_skip_378801_LIHC_TCGA-DD-A39Y-01.png
exon_skip_379758_LIHC_TCGA-DD-A39Y-01.png
exon_skip_379855_LIHC_TCGA-DD-A39Y-01.png
exon_skip_380880_LIHC_TCGA-DD-A39Y-01.png
exon_skip_3815_LIHC_TCGA-DD-A39Y-01.png
exon_skip_382091_LIHC_TCGA-DD-A39Y-01.png
exon_skip_382119_LIHC_TCGA-DD-A39Y-01.png
exon_skip_382121_LIHC_TCGA-DD-A39Y-01.png
exon_skip_382417_LIHC_TCGA-DD-A39Y-01.png
exon_skip_382738_LIHC_TCGA-DD-A39Y-01.png
exon_skip_383797_LIHC_TCGA-DD-A39Y-01.png
exon_skip_383994_LIHC_TCGA-DD-A39Y-01.png
exon_skip_385335_LIHC_TCGA-DD-A39Y-01.png
exon_skip_387812_LIHC_TCGA-DD-A39Y-01.png
exon_skip_387826_LIHC_TCGA-DD-A39Y-01.png
exon_skip_389735_LIHC_TCGA-DD-A39Y-01.png
exon_skip_39262_LIHC_TCGA-DD-A39Y-01.png
exon_skip_39479_LIHC_TCGA-DD-A39Y-01.png
exon_skip_39686_LIHC_TCGA-DD-A39Y-01.png
exon_skip_422548_LIHC_TCGA-DD-A39Y-01.png
exon_skip_423337_LIHC_TCGA-DD-A39Y-01.png
exon_skip_423570_LIHC_TCGA-DD-A39Y-01.png
exon_skip_424308_LIHC_TCGA-DD-A39Y-01.png
exon_skip_426528_LIHC_TCGA-DD-A39Y-01.png
exon_skip_426530_LIHC_TCGA-DD-A39Y-01.png
exon_skip_427280_LIHC_TCGA-DD-A39Y-01.png
exon_skip_430528_LIHC_TCGA-DD-A39Y-01.png
exon_skip_433655_LIHC_TCGA-DD-A39Y-01.png
exon_skip_434375_LIHC_TCGA-DD-A39Y-01.png
exon_skip_435237_LIHC_TCGA-DD-A39Y-01.png
exon_skip_435489_LIHC_TCGA-DD-A39Y-01.png
exon_skip_436454_LIHC_TCGA-DD-A39Y-01.png
exon_skip_436487_LIHC_TCGA-DD-A39Y-01.png
exon_skip_436488_LIHC_TCGA-DD-A39Y-01.png
exon_skip_436494_LIHC_TCGA-DD-A39Y-01.png
exon_skip_437675_LIHC_TCGA-DD-A39Y-01.png
exon_skip_437849_LIHC_TCGA-DD-A39Y-01.png
exon_skip_439418_LIHC_TCGA-DD-A39Y-01.png
exon_skip_440194_LIHC_TCGA-DD-A39Y-01.png
exon_skip_440267_LIHC_TCGA-DD-A39Y-01.png
exon_skip_441705_LIHC_TCGA-DD-A39Y-01.png
exon_skip_442657_LIHC_TCGA-DD-A39Y-01.png
exon_skip_443695_LIHC_TCGA-DD-A39Y-01.png
exon_skip_444190_LIHC_TCGA-DD-A39Y-01.png
exon_skip_445458_LIHC_TCGA-DD-A39Y-01.png
exon_skip_446492_LIHC_TCGA-DD-A39Y-01.png
exon_skip_446495_LIHC_TCGA-DD-A39Y-01.png
exon_skip_446671_LIHC_TCGA-DD-A39Y-01.png
exon_skip_450412_LIHC_TCGA-DD-A39Y-01.png
exon_skip_450419_LIHC_TCGA-DD-A39Y-01.png
exon_skip_453010_LIHC_TCGA-DD-A39Y-01.png
exon_skip_454760_LIHC_TCGA-DD-A39Y-01.png
exon_skip_456871_LIHC_TCGA-DD-A39Y-01.png
exon_skip_458039_LIHC_TCGA-DD-A39Y-01.png
exon_skip_458091_LIHC_TCGA-DD-A39Y-01.png
exon_skip_45824_LIHC_TCGA-DD-A39Y-01.png
exon_skip_458292_LIHC_TCGA-DD-A39Y-01.png
exon_skip_458727_LIHC_TCGA-DD-A39Y-01.png
exon_skip_459683_LIHC_TCGA-DD-A39Y-01.png
exon_skip_460515_LIHC_TCGA-DD-A39Y-01.png
exon_skip_463936_LIHC_TCGA-DD-A39Y-01.png
exon_skip_464994_LIHC_TCGA-DD-A39Y-01.png
exon_skip_465641_LIHC_TCGA-DD-A39Y-01.png
exon_skip_469364_LIHC_TCGA-DD-A39Y-01.png
exon_skip_470206_LIHC_TCGA-DD-A39Y-01.png
exon_skip_470208_LIHC_TCGA-DD-A39Y-01.png
exon_skip_470470_LIHC_TCGA-DD-A39Y-01.png
exon_skip_470485_LIHC_TCGA-DD-A39Y-01.png
exon_skip_471015_LIHC_TCGA-DD-A39Y-01.png
exon_skip_471018_LIHC_TCGA-DD-A39Y-01.png
exon_skip_471458_LIHC_TCGA-DD-A39Y-01.png
exon_skip_472524_LIHC_TCGA-DD-A39Y-01.png
exon_skip_472955_LIHC_TCGA-DD-A39Y-01.png
exon_skip_475132_LIHC_TCGA-DD-A39Y-01.png
exon_skip_47552_LIHC_TCGA-DD-A39Y-01.png
exon_skip_476535_LIHC_TCGA-DD-A39Y-01.png
exon_skip_477211_LIHC_TCGA-DD-A39Y-01.png
exon_skip_477637_LIHC_TCGA-DD-A39Y-01.png
exon_skip_478117_LIHC_TCGA-DD-A39Y-01.png
exon_skip_47838_LIHC_TCGA-DD-A39Y-01.png
exon_skip_478401_LIHC_TCGA-DD-A39Y-01.png
exon_skip_478926_LIHC_TCGA-DD-A39Y-01.png
exon_skip_483792_LIHC_TCGA-DD-A39Y-01.png
exon_skip_487634_LIHC_TCGA-DD-A39Y-01.png
exon_skip_489575_LIHC_TCGA-DD-A39Y-01.png
exon_skip_490603_LIHC_TCGA-DD-A39Y-01.png
exon_skip_491406_LIHC_TCGA-DD-A39Y-01.png
exon_skip_492075_LIHC_TCGA-DD-A39Y-01.png
exon_skip_492152_LIHC_TCGA-DD-A39Y-01.png
exon_skip_493904_LIHC_TCGA-DD-A39Y-01.png
exon_skip_493918_LIHC_TCGA-DD-A39Y-01.png
exon_skip_493920_LIHC_TCGA-DD-A39Y-01.png
exon_skip_494000_LIHC_TCGA-DD-A39Y-01.png
exon_skip_494030_LIHC_TCGA-DD-A39Y-01.png
exon_skip_494170_LIHC_TCGA-DD-A39Y-01.png
exon_skip_494284_LIHC_TCGA-DD-A39Y-01.png
exon_skip_499522_LIHC_TCGA-DD-A39Y-01.png
exon_skip_503301_LIHC_TCGA-DD-A39Y-01.png
exon_skip_503593_LIHC_TCGA-DD-A39Y-01.png
exon_skip_503665_LIHC_TCGA-DD-A39Y-01.png
exon_skip_504513_LIHC_TCGA-DD-A39Y-01.png
exon_skip_507316_LIHC_TCGA-DD-A39Y-01.png
exon_skip_507513_LIHC_TCGA-DD-A39Y-01.png
exon_skip_50803_LIHC_TCGA-DD-A39Y-01.png
exon_skip_50804_LIHC_TCGA-DD-A39Y-01.png
exon_skip_510119_LIHC_TCGA-DD-A39Y-01.png
exon_skip_512208_LIHC_TCGA-DD-A39Y-01.png
exon_skip_513207_LIHC_TCGA-DD-A39Y-01.png
exon_skip_513240_LIHC_TCGA-DD-A39Y-01.png
exon_skip_5141_LIHC_TCGA-DD-A39Y-01.png
exon_skip_52393_LIHC_TCGA-DD-A39Y-01.png
exon_skip_54542_LIHC_TCGA-DD-A39Y-01.png
exon_skip_55185_LIHC_TCGA-DD-A39Y-01.png
exon_skip_56398_LIHC_TCGA-DD-A39Y-01.png
exon_skip_56399_LIHC_TCGA-DD-A39Y-01.png
exon_skip_56834_LIHC_TCGA-DD-A39Y-01.png
exon_skip_58444_LIHC_TCGA-DD-A39Y-01.png
exon_skip_58452_LIHC_TCGA-DD-A39Y-01.png
exon_skip_5861_LIHC_TCGA-DD-A39Y-01.png
exon_skip_60290_LIHC_TCGA-DD-A39Y-01.png
exon_skip_60294_LIHC_TCGA-DD-A39Y-01.png
exon_skip_60561_LIHC_TCGA-DD-A39Y-01.png
exon_skip_61147_LIHC_TCGA-DD-A39Y-01.png
exon_skip_6331_LIHC_TCGA-DD-A39Y-01.png
exon_skip_6399_LIHC_TCGA-DD-A39Y-01.png
exon_skip_64652_LIHC_TCGA-DD-A39Y-01.png
exon_skip_64657_LIHC_TCGA-DD-A39Y-01.png
exon_skip_65996_LIHC_TCGA-DD-A39Y-01.png
exon_skip_66666_LIHC_TCGA-DD-A39Y-01.png
exon_skip_67549_LIHC_TCGA-DD-A39Y-01.png
exon_skip_68080_LIHC_TCGA-DD-A39Y-01.png
exon_skip_6817_LIHC_TCGA-DD-A39Y-01.png
exon_skip_69250_LIHC_TCGA-DD-A39Y-01.png
exon_skip_70509_LIHC_TCGA-DD-A39Y-01.png
exon_skip_71759_LIHC_TCGA-DD-A39Y-01.png
exon_skip_71774_LIHC_TCGA-DD-A39Y-01.png
exon_skip_73487_LIHC_TCGA-DD-A39Y-01.png
exon_skip_73796_LIHC_TCGA-DD-A39Y-01.png
exon_skip_74728_LIHC_TCGA-DD-A39Y-01.png
exon_skip_75089_LIHC_TCGA-DD-A39Y-01.png
exon_skip_75391_LIHC_TCGA-DD-A39Y-01.png
exon_skip_77962_LIHC_TCGA-DD-A39Y-01.png
exon_skip_78386_LIHC_TCGA-DD-A39Y-01.png
exon_skip_82069_LIHC_TCGA-DD-A39Y-01.png
exon_skip_82070_LIHC_TCGA-DD-A39Y-01.png
exon_skip_83493_LIHC_TCGA-DD-A39Y-01.png
exon_skip_83494_LIHC_TCGA-DD-A39Y-01.png
exon_skip_83512_LIHC_TCGA-DD-A39Y-01.png
exon_skip_83602_LIHC_TCGA-DD-A39Y-01.png
exon_skip_84090_LIHC_TCGA-DD-A39Y-01.png
exon_skip_84528_LIHC_TCGA-DD-A39Y-01.png
exon_skip_87720_LIHC_TCGA-DD-A39Y-01.png
exon_skip_87721_LIHC_TCGA-DD-A39Y-01.png
exon_skip_89597_LIHC_TCGA-DD-A39Y-01.png
exon_skip_93891_LIHC_TCGA-DD-A39Y-01.png
exon_skip_94842_LIHC_TCGA-DD-A39Y-01.png
exon_skip_94844_LIHC_TCGA-DD-A39Y-01.png
exon_skip_96282_LIHC_TCGA-DD-A39Y-01.png
exon_skip_96298_LIHC_TCGA-DD-A39Y-01.png
exon_skip_96557_LIHC_TCGA-DD-A39Y-01.png
exon_skip_96886_LIHC_TCGA-DD-A39Y-01.png
exon_skip_97738_LIHC_TCGA-DD-A39Y-01.png
exon_skip_97739_LIHC_TCGA-DD-A39Y-01.png
exon_skip_9807_LIHC_TCGA-DD-A39Y-01.png
exon_skip_98550_LIHC_TCGA-DD-A39Y-01.png
	Sample: TCGA-BR-4201-01
	Cancer type: STAD
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63488463
	Mutation end: 63488464
	Mutation type: Frame_Shift_Ins
	Reference seq: -
	Mutation seq: A
	AAchange: p.V830fs
	Sample: TCGA-BR-4201-01
	Cancer type: STAD
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63488463
	Mutation end: 63488464
	Mutation type: Frame_Shift_Ins
	Reference seq: -
	Mutation seq: A
	AAchange: p.V830fs
	Sample: TCGA-BR-4201-01
	Cancer type: STAD
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63488464
	Mutation end: 63488465
	Mutation type: Frame_Shift_Ins
	Reference seq: -
	Mutation seq: A
	AAchange: p.V830fs
	Sample: TCGA-BR-4201-01
	Cancer type: STAD
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63488464
	Mutation end: 63488465
	Mutation type: Frame_Shift_Ins
	Reference seq: -
	Mutation seq: A
	AAchange: p.V830fs
exon_skip_141192_STAD_TCGA-BR-4201-01.png
exon_skip_16960_STAD_TCGA-BR-4201-01.png
exon_skip_326432_STAD_TCGA-BR-4201-01.png
exon_skip_337819_STAD_TCGA-BR-4201-01.png
exon_skip_345944_STAD_TCGA-BR-4201-01.png
exon_skip_345950_STAD_TCGA-BR-4201-01.png
exon_skip_351676_STAD_TCGA-BR-4201-01.png
exon_skip_454428_STAD_TCGA-BR-4201-01.png
exon_skip_454431_STAD_TCGA-BR-4201-01.png
exon_skip_454433_STAD_TCGA-BR-4201-01.png
exon_skip_45525_STAD_TCGA-BR-4201-01.png
exon_skip_456626_STAD_TCGA-BR-4201-01.png
exon_skip_494729_STAD_TCGA-BR-4201-01.png
exon_skip_60290_STAD_TCGA-BR-4201-01.png
exon_skip_60294_STAD_TCGA-BR-4201-01.png
	Sample: TCGA-HU-A4H3-01
	Cancer type: STAD
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63486964
	Mutation end: 63486967
	Mutation type: Frame_Shift_Del
	Reference seq: TGAT
	Mutation seq: -
	AAchange: p.330_331del
	Sample: TCGA-HU-A4H3-01
	Cancer type: STAD
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63486964
	Mutation end: 63486967
	Mutation type: Frame_Shift_Del
	Reference seq: TGAT
	Mutation seq: -
	AAchange: p.330_331del
	Sample: TCGA-HU-A4H3-01
	Cancer type: STAD
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63486964
	Mutation end: 63486967
	Mutation type: Frame_Shift_Del
	Reference seq: TGAT
	Mutation seq: -
	AAchange: p.N330fs
	Sample: TCGA-HU-A4H3-01
	Cancer type: STAD
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63486964
	Mutation end: 63486967
	Mutation type: Frame_Shift_Del
	Reference seq: TGAT
	Mutation seq: -
	AAchange: p.N330fs
exon_skip_101895_STAD_TCGA-HU-A4H3-01.png
exon_skip_101900_STAD_TCGA-HU-A4H3-01.png
exon_skip_134053_STAD_TCGA-HU-A4H3-01.png
exon_skip_142361_STAD_TCGA-HU-A4H3-01.png
exon_skip_21488_STAD_TCGA-HU-A4H3-01.png
exon_skip_286384_STAD_TCGA-HU-A4H3-01.png
exon_skip_299738_STAD_TCGA-HU-A4H3-01.png
exon_skip_307491_STAD_TCGA-HU-A4H3-01.png
exon_skip_308974_STAD_TCGA-HU-A4H3-01.png
exon_skip_308983_STAD_TCGA-HU-A4H3-01.png
exon_skip_312995_STAD_TCGA-HU-A4H3-01.png
exon_skip_320688_STAD_TCGA-HU-A4H3-01.png
exon_skip_320689_STAD_TCGA-HU-A4H3-01.png
exon_skip_320690_STAD_TCGA-HU-A4H3-01.png
exon_skip_328488_STAD_TCGA-HU-A4H3-01.png
exon_skip_330511_STAD_TCGA-HU-A4H3-01.png
exon_skip_450406_STAD_TCGA-HU-A4H3-01.png
exon_skip_60290_STAD_TCGA-HU-A4H3-01.png
exon_skip_60294_STAD_TCGA-HU-A4H3-01.png
exon_skip_69561_STAD_TCGA-HU-A4H3-01.png
exon_skip_74347_STAD_TCGA-HU-A4H3-01.png
exon_skip_8059_STAD_TCGA-HU-A4H3-01.png
	Sample: TCGA-CG-5723-01
	Cancer type: STAD
	ESID: exon_skip_60294
	Skipped exon start: 63486453
	Skipped exon end: 63488504
	Mutation start: 63487620
	Mutation end: 63487620
	Mutation type: Frame_Shift_Del
	Reference seq: A
	Mutation seq: -
	AAchange: p.E549fs
	Sample: TCGA-CG-5723-01
	Cancer type: STAD
	ESID: exon_skip_60301
	Skipped exon start: 63486174
	Skipped exon end: 63488504
	Mutation start: 63487620
	Mutation end: 63487620
	Mutation type: Frame_Shift_Del
	Reference seq: A
	Mutation seq: -
	AAchange: p.E549fs
exon_skip_101055_STAD_TCGA-CG-5723-01.png
exon_skip_135181_STAD_TCGA-CG-5723-01.png
exon_skip_143805_STAD_TCGA-CG-5723-01.png
exon_skip_287270_STAD_TCGA-CG-5723-01.png
exon_skip_325884_STAD_TCGA-CG-5723-01.png
exon_skip_352908_STAD_TCGA-CG-5723-01.png
exon_skip_353222_STAD_TCGA-CG-5723-01.png
exon_skip_356108_STAD_TCGA-CG-5723-01.png
exon_skip_381180_STAD_TCGA-CG-5723-01.png
exon_skip_42584_STAD_TCGA-CG-5723-01.png
exon_skip_447822_STAD_TCGA-CG-5723-01.png
exon_skip_53674_STAD_TCGA-CG-5723-01.png
exon_skip_60290_STAD_TCGA-CG-5723-01.png
exon_skip_60294_STAD_TCGA-CG-5723-01.png
exon_skip_71774_STAD_TCGA-CG-5723-01.png
exon_skip_78894_STAD_TCGA-CG-5723-01.png
exon_skip_84515_STAD_TCGA-CG-5723-01.png
exon_skip_92488_STAD_TCGA-CG-5723-01.png
	Sample: TCGA-D1-A17Q-01
	Cancer type: UCEC
	ESID: exon_skip_60283
	Skipped exon start: 63472323
	Skipped exon end: 63472379
	Mutation start: 63472322
	Mutation end: 63472322
	Mutation type: Splice_Site
	Reference seq: G
	Mutation seq: T
	AAchange: e2-1
exon_skip_313482_UCEC_TCGA-D1-A17Q-01.png
exon_skip_495978_UCEC_TCGA-D1-A17Q-01.png
exon_skip_50902_UCEC_TCGA-D1-A17Q-01.png
exon_skip_60286_UCEC_TCGA-D1-A17Q-01.png
exon_skip_86455_UCEC_TCGA-D1-A17Q-01.png

- Non-synonymous mutations located in the skipped exons in CCLE.

Sample	Skipped exon start	Skipped exon end	Mutation start	Mutation end	Mutation type	Reference seq	Mutation seq	AAchange
MHHPREB1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63486453	63488504	63486539	63486539	Frame_Shift_Del	G	-	p.G189fs
MHHPREB1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63486174	63488504	63486539	63486539	Frame_Shift_Del	G	-	p.G189fs
HCC1419_BREAST	63486453	63488504	63487619	63487620	Frame_Shift_Ins	-	A	p.E549fs
HCC1419_BREAST	63486174	63488504	63487619	63487620	Frame_Shift_Ins	-	A	p.E549fs
HCC2450_LUNG	63472323	63472379	63472347	63472347	Missense_Mutation	C	G	p.S56C
DAUDI_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63472323	63472379	63472361	63472361	Missense_Mutation	C	A	p.L61I
HEC251_ENDOMETRIUM	63486174	63488504	63486216	63486216	Missense_Mutation	T	G	p.I81S
EN_ENDOMETRIUM	63486174	63488504	63486250	63486250	Missense_Mutation	A	G	p.I92M
GB1_CENTRAL_NERVOUS_SYSTEM	63486174	63488504	63486304	63486304	Missense_Mutation	C	G	p.S110R
HEC108_ENDOMETRIUM	63486453	63488504	63486456	63486456	Missense_Mutation	G	A	p.S161N
HEC108_ENDOMETRIUM	63486174	63488504	63486456	63486456	Missense_Mutation	G	A	p.S161N
NCIH661_LUNG	63486453	63488504	63486514	63486514	Missense_Mutation	A	G	p.I180M
NCIH661_LUNG	63486174	63488504	63486514	63486514	Missense_Mutation	A	G	p.I180M
C33A_CERVIX	63486453	63488504	63486576	63486576	Missense_Mutation	C	T	p.A201V
C33A_CERVIX	63486174	63488504	63486576	63486576	Missense_Mutation	C	T	p.A201V
NCIH2066_LUNG	63486453	63488504	63486585	63486585	Missense_Mutation	G	T	p.R204I
NCIH2066_LUNG	63486174	63488504	63486585	63486585	Missense_Mutation	G	T	p.R204I
JHUEM7_ENDOMETRIUM	63486453	63488504	63486654	63486654	Missense_Mutation	C	A	p.S227Y
JHUEM7_ENDOMETRIUM	63486174	63488504	63486654	63486654	Missense_Mutation	C	A	p.S227Y
SNU46_UPPER_AERODIGESTIVE_TRACT	63486453	63488504	63486656	63486656	Missense_Mutation	T	A	p.L228M
SNU46_UPPER_AERODIGESTIVE_TRACT	63486174	63488504	63486656	63486656	Missense_Mutation	T	A	p.L228M
ES1_BONE	63486453	63488504	63486708	63486708	Missense_Mutation	A	G	p.E245G
ES1_BONE	63486174	63488504	63486708	63486708	Missense_Mutation	A	G	p.E245G
AN3CA_ENDOMETRIUM	63486453	63488504	63486782	63486782	Missense_Mutation	G	T	p.D270Y
AN3CA_ENDOMETRIUM	63486174	63488504	63486782	63486782	Missense_Mutation	G	T	p.D270Y
CW2_LARGE_INTESTINE	63486453	63488504	63486810	63486810	Missense_Mutation	C	T	p.T279I
CW2_LARGE_INTESTINE	63486174	63488504	63486810	63486810	Missense_Mutation	C	T	p.T279I
UPCISCC152_UPPER_AERODIGESTIVE_TRACT	63486453	63488504	63486866	63486866	Missense_Mutation	A	G	p.R298G
UPCISCC152_UPPER_AERODIGESTIVE_TRACT	63486174	63488504	63486866	63486866	Missense_Mutation	A	G	p.R298G
SCC90_UPPER_AERODIGESTIVE_TRACT	63486453	63488504	63486866	63486866	Missense_Mutation	A	G	p.R298G
SCC90_UPPER_AERODIGESTIVE_TRACT	63486174	63488504	63486866	63486866	Missense_Mutation	A	G	p.R298G
EN_ENDOMETRIUM	63486453	63488504	63486929	63486929	Missense_Mutation	A	G	p.N319D
EN_ENDOMETRIUM	63486174	63488504	63486929	63486929	Missense_Mutation	A	G	p.N319D
JHUEM7_ENDOMETRIUM	63486453	63488504	63486930	63486930	Missense_Mutation	A	C	p.N319T
JHUEM7_ENDOMETRIUM	63486174	63488504	63486930	63486930	Missense_Mutation	A	C	p.N319T
NCIH520_LUNG	63486453	63488504	63486972	63486972	Missense_Mutation	A	G	p.H333R
NCIH520_LUNG	63486174	63488504	63486972	63486972	Missense_Mutation	A	G	p.H333R
JHUEM7_ENDOMETRIUM	63486453	63488504	63487005	63487005	Missense_Mutation	T	A	p.L344Q
JHUEM7_ENDOMETRIUM	63486174	63488504	63487005	63487005	Missense_Mutation	T	A	p.L344Q
DMS53_LUNG	63486453	63488504	63487049	63487049	Missense_Mutation	A	T	p.I359F
DMS53_LUNG	63486174	63488504	63487049	63487049	Missense_Mutation	A	T	p.I359F
HEC59_ENDOMETRIUM	63486453	63488504	63487053	63487053	Missense_Mutation	C	T	p.T360I
HEC59_ENDOMETRIUM	63486174	63488504	63487053	63487053	Missense_Mutation	C	T	p.T360I
EW24_BONE	63486453	63488504	63487077	63487077	Missense_Mutation	G	A	p.S368N
EW24_BONE	63486174	63488504	63487077	63487077	Missense_Mutation	G	A	p.S368N
HEC6_ENDOMETRIUM	63486453	63488504	63487223	63487223	Missense_Mutation	A	G	p.T417A
HEC6_ENDOMETRIUM	63486174	63488504	63487223	63487223	Missense_Mutation	A	G	p.T417A
MOLT4_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63486453	63488504	63487287	63487287	Missense_Mutation	G	A	p.G438D
MOLT4_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63486174	63488504	63487287	63487287	Missense_Mutation	G	A	p.G438D
UACC812_BREAST	63486453	63488504	63487304	63487304	Missense_Mutation	G	A	p.D444N
UACC812_BREAST	63486174	63488504	63487304	63487304	Missense_Mutation	G	A	p.D444N
CHLA258_BONE	63486453	63488504	63487478	63487478	Missense_Mutation	G	T	p.D502Y
CHLA258_BONE	63486174	63488504	63487478	63487478	Missense_Mutation	G	T	p.D502Y
JURKAT_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63486453	63488504	63487563	63487563	Missense_Mutation	C	T	p.A530V
JURKAT_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63486174	63488504	63487563	63487563	Missense_Mutation	C	T	p.A530V
AML193_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63486453	63488504	63487625	63487625	Missense_Mutation	A	C	p.T551P
AML193_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63486174	63488504	63487625	63487625	Missense_Mutation	A	C	p.T551P
HEC265_ENDOMETRIUM	63486453	63488504	63487639	63487639	Missense_Mutation	T	A	p.F555L
HEC265_ENDOMETRIUM	63486174	63488504	63487639	63487639	Missense_Mutation	T	A	p.F555L
TE9_OESOPHAGUS	63486453	63488504	63487930	63487930	Missense_Mutation	G	C	p.E652D
TE9_OESOPHAGUS	63486174	63488504	63487930	63487930	Missense_Mutation	G	C	p.E652D
HEC1_ENDOMETRIUM	63486453	63488504	63488144	63488144	Missense_Mutation	G	T	p.G724C
HEC1_ENDOMETRIUM	63486174	63488504	63488144	63488144	Missense_Mutation	G	T	p.G724C
SNU349_KIDNEY	63486453	63488504	63488231	63488231	Missense_Mutation	G	A	p.E753K
SNU349_KIDNEY	63486174	63488504	63488231	63488231	Missense_Mutation	G	A	p.E753K
Y79_AUTONOMIC_GANGLIA	63486453	63488504	63488349	63488349	Missense_Mutation	T	A	p.I792N
Y79_AUTONOMIC_GANGLIA	63486174	63488504	63488349	63488349	Missense_Mutation	T	A	p.I792N
IM9_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63486453	63488504	63488363	63488363	Missense_Mutation	G	A	p.V797I
IM9_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63486174	63488504	63488363	63488363	Missense_Mutation	G	A	p.V797I
NCIH2172_LUNG	63486453	63488504	63488480	63488480	Missense_Mutation	G	A	p.A836T
NCIH2172_LUNG	63486174	63488504	63488480	63488480	Missense_Mutation	G	A	p.A836T
SNU81_LARGE_INTESTINE	63519979	63520117	63520079	63520079	Missense_Mutation	C	T	p.R947C
NCIH1770_LUNG	63486453	63488504	63487013	63487013	Nonsense_Mutation	C	T	p.Q347*
NCIH1770_LUNG	63486174	63488504	63487013	63487013	Nonsense_Mutation	C	T	p.Q347*
CTV1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63486453	63488504	63487423	63487423	Nonsense_Mutation	G	A	p.W483*
CTV1_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63486174	63488504	63487423	63487423	Nonsense_Mutation	G	A	p.W483*
PF382_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE	63519979	63520117	63519980	63519980	Splice_Site	G	A	p.A914T

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Splicing Quantitative Trait Loci (sQTL) in the exon skipping event for RTN3

sQTL information located at the skipped exons.

Exon skip ID

Chromosome

Three exons

Skippped exon

ENST

Cancer type

SNP id

Location

DNA change (ref/var)

P-value

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Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for RTN3

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Survival analysis of Splicing Quantitative Trait Methylation (sQTM) in the skipped exon for RTN3

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RelatedDrugs for RTN3

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for RTN3

Diseases associated with this gene.
(DisGeNet 4.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	Gene structures and expression levels
	Exon skipping events with PSIs in TCGA
	Exon skipping events with PSIs in GTEx
	Open reading frame (ORF) annotation in the exon skipping event
	Exon skipping events in the canonical protein sequence
	SNVs in the skipped exons with depth of coverage
	Splicing Quantitative Trait Loci (sQTLs) in the skipped exons
	Splicing Quantitative Trait Methylation (sQTM) in the skipped exon
	Related drugs with this gene
	Related diseases with this gene

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