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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for FAM20B

check button Gene summary
Gene informationGene symbol

FAM20B

Gene ID

9917

Gene nameFAM20B glycosaminoglycan xylosylkinase
Synonymsgxk1
Cytomap

1q25.2

Type of geneprotein-coding
Descriptionglycosaminoglycan xylosylkinasefamily with sequence similarity 20, member Bxylose kinase
Modification date20200313
UniProtAcc

O75063,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for FAM20B

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_47718(179033773, +), ADediting_47719(179035868, +), ADediting_47720(179035874, +), ADediting_47721(179035920, +), ADediting_47722(179037516, +), ADediting_47723(179037554, +), ADediting_47724(179037578, +), ADediting_47725(179037585, +), ADediting_47726(179037604, +), ADediting_47727(179037626, +), ADediting_47728(179037670, +), ADediting_47729(179037709, +), ADediting_47730(179037761, +), ADediting_47731(179038145, +), ADediting_47732(179038153, +), ADediting_47733(179038170, +), ADediting_47734(179038194, +), ADediting_47735(179038207, +), ADediting_47736(179038208, +), ADediting_47737(179038233, +), ADediting_47738(179038247, +), ADediting_47739(179038251, +), ADediting_47740(179038290, +), ADediting_47741(179038296, +), ADediting_47742(179038317, +), ADediting_47743(179038336, +), ADediting_47744(179038340, +), ADediting_47745(179038356, +), ADediting_47746(179038361, +), ADediting_47747(179038401, +), ADediting_47748(179045763, +), ADediting_47749(179045765, +), ADediting_47750(179046395, +), ADediting_47751(179046441, +), ADediting_47752(179046475, +), ADediting_47753(179046567, +), ADediting_47754(179046609, +), ADediting_47755(179049564, +), ADediting_47756(179049572, +), ADediting_47757(179049641, +), ADediting_47758(179049816, +), ADediting_47759(179050844, +), ADediting_47760(179050850, +), ADediting_47761(179050867, +), ADediting_47762(179050873, +), ADediting_47763(179050897, +), ADediting_47764(179050957, +), ADediting_47765(179050960, +), ADediting_47766(179050961, +), ADediting_47767(179051705, +), ADediting_47768(179051727, +), ADediting_47769(179051746, +), ADediting_47770(179051747, +), ADediting_47771(179051748, +), ADediting_47772(179051750, +), ADediting_47773(179051764, +), ADediting_47774(179051788, +), ADediting_47775(179051828, +), ADediting_47776(179051848, +), ADediting_47777(179062539, +), ADediting_47778(179067449, +), ADediting_47779(179067452, +), ADediting_47780(179067454, +), ADediting_47781(179067478, +), ADediting_47782(179067493, +), ADediting_47783(179067497, +), ADediting_47784(179067833, +), ADediting_47785(179067864, +), ADediting_47786(179067868, +), ADediting_47787(179067881, +), ADediting_47788(179067998, +), ADediting_47789(179068031, +), ADediting_47790(179068484, +), ADediting_47791(179068489, +), ADediting_47792(179068561, +), ADediting_47793(179069500, +), ADediting_47794(179069510, +), ADediting_47795(179070175, +), ADediting_47796(179070243, +), ADediting_47797(179070246, +), ADediting_47798(179070664, +), ADediting_47799(179070725, +), ADediting_47800(179070793, +), ADediting_47801(179073340, +), ADediting_47802(179073341, +), ADediting_47803(179073347, +), ADediting_47804(179073359, +), ADediting_47805(179073377, +), ADediting_47806(179073380, +), ADediting_47807(179073390, +), ADediting_47808(179073395, +), ADediting_47809(179073396, +), ADediting_47810(179073409, +), ADediting_47811(179073415, +), ADediting_47812(179073416, +), ADediting_47813(179073420, +), ADediting_47814(179073433, +), ADediting_47815(179073440, +), ADediting_47816(179073445, +), ADediting_47817(179073455, +), ADediting_47818(179073457, +), ADediting_47819(179073477, +), ADediting_47820(179073481, +), ADediting_47821(179073482, +), ADediting_47822(179073488, +), ADediting_47823(179073496, +), ADediting_47824(179073532, +), ADediting_47825(179073538, +), ADediting_47826(179073552, +), ADediting_47827(179073557, +), ADediting_47828(179073562, +), ADediting_47829(179073566, +), ADediting_47830(179073575, +), ADediting_47831(179073584, +), ADediting_47832(179073585, +), ADediting_47833(179073597, +), ADediting_47834(179073603, +), ADediting_47835(179073606, +), ADediting_47836(179073770, +), ADediting_47837(179074941, +), ADediting_47838(179074957, +), ADediting_47839(179074961, +), ADediting_47840(179074965, +), ADediting_47841(179074970, +), ADediting_47842(179074975, +), ADediting_47843(179074980, +), ADediting_47844(179074994, +), ADediting_47845(179075030, +), ADediting_47846(179075031, +), ADediting_47847(179075033, +), ADediting_47848(179075034, +), ADediting_47849(179075039, +), ADediting_47850(179075040, +), ADediting_47851(179075041, +), ADediting_47852(179075042, +), ADediting_47853(179075045, +), ADediting_47854(179075046, +), ADediting_47855(179075048, +), ADediting_47856(179075053, +), ADediting_47857(179075061, +), ADediting_47858(179075071, +), ADediting_47859(179075077, +), ADediting_47860(179075081, +), ADediting_47861(179075088, +), ADediting_47862(179075094, +), ADediting_47863(179075098, +), ADediting_47864(179075104, +), ADediting_47865(179075107, +), ADediting_47866(179075117, +), ADediting_47867(179075120, +), ADediting_47868(179075125, +), ADediting_47869(179075126, +), ADediting_47870(179075133, +), ADediting_47871(179075137, +), ADediting_47872(179075144, +), ADediting_47873(179075162, +), ADediting_47874(179075174, +), ADediting_47875(179075180, +), ADediting_47876(179075182, +), ADediting_1516561(179074869, +), ADediting_1516562(179075113, +), ADediting_1516563(179075142, +), ADediting_1516564(179075157, +), ADediting_1597660(179051831, +), ADediting_1597661(179051832, +), ADediting_1597662(179067893, +), ADediting_1597663(179067909, +), ADediting_1597664(179070089, +), ADediting_1597665(179074936, +), ADediting_1597666(179074944, +), ADediting_1597667(179074983, +), ADediting_1597668(179075032, +), ADediting_1597669(179075038, +), ADediting_1597670(179075112, +),

Top

RNA editing positional annotations for FAM20B using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_47718chr1_179033773_+intronic
ADediting_47719chr1_179035868_+intronic
ADediting_47720chr1_179035874_+intronic
ADediting_47721chr1_179035920_+intronic
ADediting_47722chr1_179037516_+intronic
ADediting_47723chr1_179037554_+intronic
ADediting_47724chr1_179037578_+intronic
ADediting_47725chr1_179037585_+intronic
ADediting_47726chr1_179037604_+intronic
ADediting_47727chr1_179037626_+intronic
ADediting_47728chr1_179037670_+intronic
ADediting_47729chr1_179037709_+intronic
ADediting_47730chr1_179037761_+intronic
ADediting_47731chr1_179038145_+intronic
ADediting_47732chr1_179038153_+intronic
ADediting_47733chr1_179038170_+intronic
ADediting_47734chr1_179038194_+intronic
ADediting_47735chr1_179038207_+intronic
ADediting_47736chr1_179038208_+intronic
ADediting_47737chr1_179038233_+intronic
ADediting_47738chr1_179038247_+intronic
ADediting_47739chr1_179038251_+intronic
ADediting_47740chr1_179038290_+intronic
ADediting_47741chr1_179038296_+intronic
ADediting_47742chr1_179038317_+intronic
ADediting_47743chr1_179038336_+intronic
ADediting_47744chr1_179038340_+intronic
ADediting_47745chr1_179038356_+intronic
ADediting_47746chr1_179038361_+intronic
ADediting_47747chr1_179038401_+intronic
ADediting_47748chr1_179045763_+intronic
ADediting_47749chr1_179045765_+intronic
ADediting_47750chr1_179046395_+intronic
ADediting_47751chr1_179046441_+intronic
ADediting_47752chr1_179046475_+intronic
ADediting_47753chr1_179046567_+intronic
ADediting_47754chr1_179046609_+intronic
ADediting_47755chr1_179049564_+intronic
ADediting_47756chr1_179049572_+intronic
ADediting_47757chr1_179049641_+intronic
ADediting_47758chr1_179049816_+intronic
ADediting_47759chr1_179050844_+intronic
ADediting_47760chr1_179050850_+intronic
ADediting_47761chr1_179050867_+intronic
ADediting_47762chr1_179050873_+intronic
ADediting_47763chr1_179050897_+intronic
ADediting_47764chr1_179050957_+intronic
ADediting_47765chr1_179050960_+intronic
ADediting_47766chr1_179050961_+intronic
ADediting_47767chr1_179051705_+intronic
ADediting_47768chr1_179051727_+intronic
ADediting_47769chr1_179051746_+intronic
ADediting_47770chr1_179051747_+intronic
ADediting_47771chr1_179051748_+intronic
ADediting_47772chr1_179051750_+intronic
ADediting_47773chr1_179051764_+intronic
ADediting_47774chr1_179051788_+intronic
ADediting_47775chr1_179051828_+intronic
ADediting_47776chr1_179051848_+intronic
ADediting_47777chr1_179062539_+intronic
ADediting_47778chr1_179067449_+intronic
ADediting_47779chr1_179067452_+intronic
ADediting_47780chr1_179067454_+intronic
ADediting_47781chr1_179067478_+intronic
ADediting_47782chr1_179067493_+intronic
ADediting_47783chr1_179067497_+intronic
ADediting_47784chr1_179067833_+intronic
ADediting_47785chr1_179067864_+intronic
ADediting_47786chr1_179067868_+intronic
ADediting_47787chr1_179067881_+intronic
ADediting_47788chr1_179067998_+intronic
ADediting_47789chr1_179068031_+intronic
ADediting_47790chr1_179068484_+intronic
ADediting_47791chr1_179068489_+intronic
ADediting_47792chr1_179068561_+intronic
ADediting_47793chr1_179069500_+intronic
ADediting_47794chr1_179069510_+intronic
ADediting_47795chr1_179070175_+intronic
ADediting_47796chr1_179070243_+intronic
ADediting_47797chr1_179070246_+intronic
ADediting_47798chr1_179070664_+intronic
ADediting_47799chr1_179070725_+intronic
ADediting_47800chr1_179070793_+intronic
ADediting_47801chr1_179073340_+UTR3
ADediting_47802chr1_179073341_+UTR3
ADediting_47803chr1_179073347_+UTR3
ADediting_47804chr1_179073359_+UTR3
ADediting_47805chr1_179073377_+UTR3
ADediting_47806chr1_179073380_+UTR3
ADediting_47807chr1_179073390_+UTR3
ADediting_47808chr1_179073395_+UTR3
ADediting_47809chr1_179073396_+UTR3
ADediting_47810chr1_179073409_+UTR3
ADediting_47811chr1_179073415_+UTR3
ADediting_47812chr1_179073416_+UTR3
ADediting_47813chr1_179073420_+UTR3
ADediting_47814chr1_179073433_+UTR3
ADediting_47815chr1_179073440_+UTR3
ADediting_47816chr1_179073445_+UTR3
ADediting_47817chr1_179073455_+UTR3
ADediting_47818chr1_179073457_+UTR3
ADediting_47819chr1_179073477_+UTR3
ADediting_47820chr1_179073481_+UTR3
ADediting_47821chr1_179073482_+UTR3
ADediting_47822chr1_179073488_+UTR3
ADediting_47823chr1_179073496_+UTR3
ADediting_47824chr1_179073532_+UTR3
ADediting_47825chr1_179073538_+UTR3
ADediting_47826chr1_179073552_+UTR3
ADediting_47827chr1_179073557_+UTR3
ADediting_47828chr1_179073562_+UTR3
ADediting_47829chr1_179073566_+UTR3
ADediting_47830chr1_179073575_+UTR3
ADediting_47831chr1_179073584_+UTR3
ADediting_47832chr1_179073585_+UTR3
ADediting_47833chr1_179073597_+UTR3
ADediting_47834chr1_179073603_+UTR3
ADediting_47835chr1_179073606_+UTR3
ADediting_47836chr1_179073770_+UTR3
ADediting_47837chr1_179074941_+UTR3
ADediting_47838chr1_179074957_+UTR3
ADediting_47839chr1_179074961_+UTR3
ADediting_47840chr1_179074965_+UTR3
ADediting_47841chr1_179074970_+UTR3
ADediting_47842chr1_179074975_+UTR3
ADediting_47843chr1_179074980_+UTR3
ADediting_47844chr1_179074994_+UTR3
ADediting_47845chr1_179075030_+UTR3
ADediting_47846chr1_179075031_+UTR3
ADediting_47847chr1_179075033_+UTR3
ADediting_47848chr1_179075034_+UTR3
ADediting_47849chr1_179075039_+UTR3
ADediting_47850chr1_179075040_+UTR3
ADediting_47851chr1_179075041_+UTR3
ADediting_47852chr1_179075042_+UTR3
ADediting_47853chr1_179075045_+UTR3
ADediting_47854chr1_179075046_+UTR3
ADediting_47855chr1_179075048_+UTR3
ADediting_47856chr1_179075053_+UTR3
ADediting_47857chr1_179075061_+UTR3
ADediting_47858chr1_179075071_+UTR3
ADediting_47859chr1_179075077_+UTR3
ADediting_47860chr1_179075081_+UTR3
ADediting_47861chr1_179075088_+UTR3
ADediting_47862chr1_179075094_+UTR3
ADediting_47863chr1_179075098_+UTR3
ADediting_47864chr1_179075104_+UTR3
ADediting_47865chr1_179075107_+UTR3
ADediting_47866chr1_179075117_+UTR3
ADediting_47867chr1_179075120_+UTR3
ADediting_47868chr1_179075125_+UTR3
ADediting_47869chr1_179075126_+UTR3
ADediting_47870chr1_179075133_+UTR3
ADediting_47871chr1_179075137_+UTR3
ADediting_47872chr1_179075144_+UTR3
ADediting_47873chr1_179075162_+UTR3
ADediting_47874chr1_179075174_+UTR3
ADediting_47875chr1_179075180_+UTR3
ADediting_47876chr1_179075182_+UTR3
ADediting_1516561chr1_179074869_+UTR3
ADediting_1516562chr1_179075113_+UTR3
ADediting_1516563chr1_179075142_+UTR3
ADediting_1516564chr1_179075157_+UTR3
ADediting_1597660chr1_179051831_+intronic
ADediting_1597661chr1_179051832_+intronic
ADediting_1597662chr1_179067893_+intronic
ADediting_1597663chr1_179067909_+intronic
ADediting_1597664chr1_179070089_+intronic
ADediting_1597665chr1_179074936_+UTR3
ADediting_1597666chr1_179074944_+UTR3
ADediting_1597667chr1_179074983_+UTR3
ADediting_1597668chr1_179075032_+UTR3
ADediting_1597669chr1_179075038_+UTR3
ADediting_1597670chr1_179075112_+UTR3

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_47718chr1_179033773_+SINEAluName=AluSx3
ADediting_47719chr1_179035868_+SINEAluName=AluSx1
ADediting_47720chr1_179035874_+SINEAluName=AluSx1
ADediting_47721chr1_179035920_+SINEAluName=AluSx1
ADediting_47722chr1_179037516_+SINEAluName=AluSx1
ADediting_47723chr1_179037554_+SINEAluName=AluSx1
ADediting_47724chr1_179037578_+SINEAluName=AluSx1
ADediting_47725chr1_179037585_+SINEAluName=AluSx1
ADediting_47726chr1_179037604_+SINEAluName=AluSx1
ADediting_47727chr1_179037626_+SINEAluName=AluSx1
ADediting_47728chr1_179037670_+SINEAluName=AluSx1
ADediting_47729chr1_179037709_+SINEAluName=AluSx1
ADediting_47730chr1_179037761_+SINEAluName=AluSx1
ADediting_47731chr1_179038145_+SINEAluName=AluSp
ADediting_47732chr1_179038153_+SINEAluName=AluSp
ADediting_47733chr1_179038170_+SINEAluName=AluSp
ADediting_47734chr1_179038194_+SINEAluName=AluSp
ADediting_47735chr1_179038207_+SINEAluName=AluSp
ADediting_47736chr1_179038208_+SINEAluName=AluSp
ADediting_47737chr1_179038233_+SINEAluName=AluSp
ADediting_47738chr1_179038247_+SINEAluName=AluSp
ADediting_47739chr1_179038251_+SINEAluName=AluSp
ADediting_47740chr1_179038290_+SINEAluName=AluSp
ADediting_47741chr1_179038296_+SINEAluName=AluSp
ADediting_47742chr1_179038317_+SINEAluName=AluSp
ADediting_47743chr1_179038336_+SINEAluName=AluSp
ADediting_47744chr1_179038340_+SINEAluName=AluSp
ADediting_47745chr1_179038356_+SINEAluName=AluSp
ADediting_47746chr1_179038361_+SINEAluName=AluSp
ADediting_47747chr1_179038401_+SINEAluName=AluSp
ADediting_47748chr1_179045763_+SINEAluName=AluJr
ADediting_47749chr1_179045765_+SINEAluName=AluJr
ADediting_47750chr1_179046395_+SINEAluName=AluSp
ADediting_47751chr1_179046441_+SINEAluName=AluSp
ADediting_47752chr1_179046475_+SINEAluName=AluSp
ADediting_47753chr1_179046567_+SINEAluName=AluSp
ADediting_47754chr1_179046609_+SINEAluName=AluSp
ADediting_47755chr1_179049564_+SINEAluName=AluSx1
ADediting_47756chr1_179049572_+SINEAluName=AluSx1
ADediting_47757chr1_179049641_+SINEAluName=AluSx1
ADediting_47758chr1_179049816_+SINEAluName=AluSx1
ADediting_47759chr1_179050844_+SINEAluName=AluSx3
ADediting_47760chr1_179050850_+SINEAluName=AluSx3
ADediting_47761chr1_179050867_+SINEAluName=AluSx3
ADediting_47762chr1_179050873_+SINEAluName=AluSx3
ADediting_47763chr1_179050897_+SINEAluName=AluSx3
ADediting_47764chr1_179050957_+SINEAluName=AluSx3
ADediting_47765chr1_179050960_+SINEAluName=AluSx3
ADediting_47766chr1_179050961_+SINEAluName=AluSx3
ADediting_47767chr1_179051705_+SINEAluName=AluSx3
ADediting_47768chr1_179051727_+SINEAluName=AluSx3
ADediting_47769chr1_179051746_+SINEAluName=AluSx3
ADediting_47770chr1_179051747_+SINEAluName=AluSx3
ADediting_47771chr1_179051748_+SINEAluName=AluSx3
ADediting_47772chr1_179051750_+SINEAluName=AluSx3
ADediting_47773chr1_179051764_+SINEAluName=AluSx3
ADediting_47774chr1_179051788_+SINEAluName=AluSx3
ADediting_47775chr1_179051828_+SINEAluName=AluSx3
ADediting_47776chr1_179051848_+SINEAluName=AluSx3
ADediting_47777chr1_179062539_+SINEAluName=AluSg4
ADediting_47778chr1_179067449_+SINEAluName=AluSx1
ADediting_47779chr1_179067452_+SINEAluName=AluSx1
ADediting_47780chr1_179067454_+SINEAluName=AluSx1
ADediting_47781chr1_179067478_+SINEAluName=AluSx1
ADediting_47782chr1_179067493_+SINEAluName=AluSx1
ADediting_47783chr1_179067497_+SINEAluName=AluSx1
ADediting_47784chr1_179067833_+SINEAluName=AluSx1
ADediting_47785chr1_179067864_+SINEAluName=AluSx1
ADediting_47786chr1_179067868_+SINEAluName=AluSx1
ADediting_47787chr1_179067881_+SINEAluName=AluSx1
ADediting_47788chr1_179067998_+SINEAluName=AluSx1
ADediting_47789chr1_179068031_+SINEAluName=AluSx1
ADediting_47790chr1_179068484_+SINEAluName=AluSg4
ADediting_47791chr1_179068489_+SINEAluName=AluSg4
ADediting_47792chr1_179068561_+SINEAluName=AluSg4
ADediting_47793chr1_179069500_+SINEAluName=AluSx1
ADediting_47794chr1_179069510_+SINEAluName=AluSx1
ADediting_47795chr1_179070175_+SINEAluName=AluSz
ADediting_47796chr1_179070243_+SINEAluName=AluSz
ADediting_47797chr1_179070246_+SINEAluName=AluSz
ADediting_47798chr1_179070664_+SINEAluName=AluSx1
ADediting_47799chr1_179070725_+SINEAluName=AluSx1
ADediting_47800chr1_179070793_+SINEAluName=AluSx1
ADediting_47801chr1_179073340_+SINEAluName=AluSx1
ADediting_47802chr1_179073341_+SINEAluName=AluSx1
ADediting_47803chr1_179073347_+SINEAluName=AluSx1
ADediting_47804chr1_179073359_+SINEAluName=AluSx1
ADediting_47805chr1_179073377_+SINEAluName=AluSx1
ADediting_47806chr1_179073380_+SINEAluName=AluSx1
ADediting_47807chr1_179073390_+SINEAluName=AluSx1
ADediting_47808chr1_179073395_+SINEAluName=AluSx1
ADediting_47809chr1_179073396_+SINEAluName=AluSx1
ADediting_47810chr1_179073409_+SINEAluName=AluSx1
ADediting_47811chr1_179073415_+SINEAluName=AluSx1
ADediting_47812chr1_179073416_+SINEAluName=AluSx1
ADediting_47813chr1_179073420_+SINEAluName=AluSx1
ADediting_47814chr1_179073433_+SINEAluName=AluSx1
ADediting_47815chr1_179073440_+SINEAluName=AluSx1
ADediting_47816chr1_179073445_+SINEAluName=AluSx1
ADediting_47817chr1_179073455_+SINEAluName=AluSx1
ADediting_47818chr1_179073457_+SINEAluName=AluSx1
ADediting_47819chr1_179073477_+SINEAluName=AluSx1
ADediting_47820chr1_179073481_+SINEAluName=AluSx1
ADediting_47821chr1_179073482_+SINEAluName=AluSx1
ADediting_47822chr1_179073488_+SINEAluName=AluSx1
ADediting_47823chr1_179073496_+SINEAluName=AluSx1
ADediting_47824chr1_179073532_+SINEAluName=AluSx1
ADediting_47825chr1_179073538_+SINEAluName=AluSx1
ADediting_47826chr1_179073552_+SINEAluName=AluSx1
ADediting_47827chr1_179073557_+SINEAluName=AluSx1
ADediting_47828chr1_179073562_+SINEAluName=AluSx1
ADediting_47829chr1_179073566_+SINEAluName=AluSx1
ADediting_47830chr1_179073575_+SINEAluName=AluSx1
ADediting_47831chr1_179073584_+SINEAluName=AluSx1
ADediting_47832chr1_179073585_+SINEAluName=AluSx1
ADediting_47833chr1_179073597_+SINEAluName=AluSx1
ADediting_47834chr1_179073603_+SINEAluName=AluSx1
ADediting_47835chr1_179073606_+SINEAluName=AluSx1
ADediting_47837chr1_179074941_+SINEAluName=AluSx
ADediting_47838chr1_179074957_+SINEAluName=AluSx
ADediting_47839chr1_179074961_+SINEAluName=AluSx
ADediting_47840chr1_179074965_+SINEAluName=AluSx
ADediting_47841chr1_179074970_+SINEAluName=AluSx
ADediting_47842chr1_179074975_+SINEAluName=AluSx
ADediting_47843chr1_179074980_+SINEAluName=AluSx
ADediting_47844chr1_179074994_+SINEAluName=AluSx
ADediting_47845chr1_179075030_+SINEAluName=AluSx
ADediting_47846chr1_179075031_+SINEAluName=AluSx
ADediting_47847chr1_179075033_+SINEAluName=AluSx
ADediting_47848chr1_179075034_+SINEAluName=AluSx
ADediting_47849chr1_179075039_+SINEAluName=AluSx
ADediting_47850chr1_179075040_+SINEAluName=AluSx
ADediting_47851chr1_179075041_+SINEAluName=AluSx
ADediting_47852chr1_179075042_+SINEAluName=AluSx
ADediting_47853chr1_179075045_+SINEAluName=AluSx
ADediting_47854chr1_179075046_+SINEAluName=AluSx
ADediting_47855chr1_179075048_+SINEAluName=AluSx
ADediting_47856chr1_179075053_+SINEAluName=AluSx
ADediting_47857chr1_179075061_+SINEAluName=AluSx
ADediting_47858chr1_179075071_+SINEAluName=AluSx
ADediting_47859chr1_179075077_+SINEAluName=AluSx
ADediting_47860chr1_179075081_+SINEAluName=AluSx
ADediting_47861chr1_179075088_+SINEAluName=AluSx
ADediting_47862chr1_179075094_+SINEAluName=AluSx
ADediting_47863chr1_179075098_+SINEAluName=AluSx
ADediting_47864chr1_179075104_+SINEAluName=AluSx
ADediting_47865chr1_179075107_+SINEAluName=AluSx
ADediting_47866chr1_179075117_+SINEAluName=AluSx
ADediting_47867chr1_179075120_+SINEAluName=AluSx
ADediting_47868chr1_179075125_+SINEAluName=AluSx
ADediting_47869chr1_179075126_+SINEAluName=AluSx
ADediting_47870chr1_179075133_+SINEAluName=AluSx
ADediting_47871chr1_179075137_+SINEAluName=AluSx
ADediting_47872chr1_179075144_+SINEAluName=AluSx
ADediting_47873chr1_179075162_+SINEAluName=AluSx
ADediting_47874chr1_179075174_+SINEAluName=AluSx
ADediting_47875chr1_179075180_+SINEAluName=AluSx
ADediting_47876chr1_179075182_+SINEAluName=AluSx
ADediting_1516562chr1_179075113_+SINEAluName=AluSx
ADediting_1516563chr1_179075142_+SINEAluName=AluSx
ADediting_1516564chr1_179075157_+SINEAluName=AluSx
ADediting_1597660chr1_179051831_+SINEAluName=AluSx3
ADediting_1597661chr1_179051832_+SINEAluName=AluSx3
ADediting_1597662chr1_179067893_+SINEAluName=AluSx1
ADediting_1597663chr1_179067909_+SINEAluName=AluSx1
ADediting_1597664chr1_179070089_+SINEAluName=AluSz
ADediting_1597665chr1_179074936_+SINEAluName=AluSx
ADediting_1597666chr1_179074944_+SINEAluName=AluSx
ADediting_1597667chr1_179074983_+SINEAluName=AluSx
ADediting_1597668chr1_179075032_+SINEAluName=AluSx
ADediting_1597669chr1_179075038_+SINEAluName=AluSx
ADediting_1597670chr1_179075112_+SINEAluName=AluSx

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RNA A-to-I editing events in the alternative splicing sites for FAM20B

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for FAM20B

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
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check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for FAM20B

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for FAM20B

check buttonRNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
all structure

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1516561chr1_179074869_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1237-3pchr11790748631790748697mer-m8179074850179074870140-11.36
ADediting_1516561chr1_179074869_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4512chr11790748671790748748mer-1a179074854179074874150-16.08
ADediting_1516562chr1_179075113_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-378a-3pchr11790751111790751177mer-m8179075098179075118150-14.48
ADediting_1516562chr1_179075113_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-378bchr11790751111790751177mer-m8179075100179075118143-13.74
ADediting_1516562chr1_179075113_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-378cchr11790751111790751177mer-m8179075095179075118150-16.91
ADediting_1516562chr1_179075113_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-378dchr11790751111790751177mer-m8179075100179075118150-13.84
ADediting_1516562chr1_179075113_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-378echr11790751111790751177mer-m8179075101179075118150-16.74
ADediting_1516562chr1_179075113_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-378fchr11790751111790751177mer-m8179075099179075118143-13.15
ADediting_1516562chr1_179075113_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-378hchr11790751111790751177mer-m8179075097179075118148-14.94
ADediting_1516562chr1_179075113_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-378ichr11790751111790751177mer-m8179075099179075118146-14.61
ADediting_1516562chr1_179075113_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-422achr11790751111790751177mer-m8179075097179075118152-19.12
ADediting_1516563chr1_179075142_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4267chr11790751351790751417mer-m8179075127179075142148-20.54
ADediting_1516563chr1_179075142_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-7977chr11790751371790751437mer-m8179075126179075144150-21.06
ADediting_1597667chr1_179074983_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-331-3pchr11790749771790749837mer-m8179074965179074984146-21.05
ADediting_47802chr1_179073341_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3661chr11790733371790733437mer-m8179073324179073344153-19.81
ADediting_47802chr1_179073341_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3663-5pchr11790733341790733407mer-m8179073321179073341140-13.62
ADediting_47802chr1_179073341_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-631chr11790733371790733437mer-m8179073323179073344149-17.82
ADediting_47802chr1_179073341_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-769-5pchr11790733391790733468mer-1a179073327179073346149-18.37
ADediting_47804chr1_179073359_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3940-3pchr11790733561790733627mer-m8179073342179073363147-22.47
ADediting_47806chr1_179073380_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-548ao-3pchr11790733771790733837mer-m8179073364179073384162-22.88
ADediting_47809chr1_179073396_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-17-3pchr11790733891790733957mer-m8179073376179073396153-16.85
ADediting_47809chr1_179073396_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-485-5pchr11790733931790733997mer-m8179073380179073400149-16.78
ADediting_47809chr1_179073396_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6884-5pchr11790733931790733997mer-m8179073378179073400154-17.69
ADediting_47810chr1_179073409_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1247-3pchr11790734041790734107mer-m8179073389179073411154-26.98
ADediting_47812chr1_179073416_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6078chr11790734121790734198mer-1a179073401179073419149-21.5
ADediting_47813chr1_179073420_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-589-5pchr11790734181790734247mer-m8179073405179073425150-16.19
ADediting_47814chr1_179073433_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6089chr11790734311790734377mer-m8179073415179073438160-38.19
ADediting_47816chr1_179073445_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4691-3pchr11790734421790734487mer-m8179073422179073449150-28.04
ADediting_47816chr1_179073445_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6777-3pchr11790734391790734457mer-m8179073427179073446146-16.78
ADediting_47820chr1_179073481_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1207-3pchr11790734741790734818mer-1a179073464179073481147-14.68
ADediting_47820chr1_179073481_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-34a-3pchr11790734771790734837mer-m8179073462179073484143-10.08
ADediting_47821chr1_179073482_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4661-5pchr11790734761790734827mer-m8179073461179073483147-13.84
ADediting_47821chr1_179073482_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-548ae-3pchr11790734801790734878mer-1a179073467179073487141-5.97
ADediting_47821chr1_179073482_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-548ah-3pchr11790734801790734878mer-1a179073465179073487143-6.55
ADediting_47821chr1_179073482_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-548aj-3pchr11790734801790734878mer-1a179073467179073487141-8.47
ADediting_47821chr1_179073482_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-548am-3pchr11790734801790734878mer-1a179073465179073487143-6.28
ADediting_47821chr1_179073482_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-548aq-3pchr11790734801790734878mer-1a179073466179073487141-5.97
ADediting_47821chr1_179073482_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-548j-3pchr11790734801790734878mer-1a179073467179073487141-5.97
ADediting_47821chr1_179073482_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-548x-3pchr11790734801790734878mer-1a179073468179073487141-8.47
ADediting_47821chr1_179073482_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-7844-5pchr11790734781790734847mer-m8179073464179073485152-16.37
ADediting_47824chr1_179073532_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-941chr11790735281790735347mer-m8179073512179073535145-20.03
ADediting_47826chr1_179073552_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1227-5pchr11790735501790735567mer-m8179073541179073557157-25.37
ADediting_47826chr1_179073552_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4640-5pchr11790735481790735547mer-m8179073533179073555146-22.96
ADediting_47826chr1_179073552_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4726-5pchr11790735481790735547mer-m8179073534179073555151-22.7
ADediting_47826chr1_179073552_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-665chr11790735451790735517mer-m8179073533179073552157-19.9
ADediting_47826chr1_179073552_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6762-5pchr11790735491790735568mer-1a179073535179073556151-24.54
ADediting_47826chr1_179073552_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6845-5pchr11790735491790735568mer-1a179073536179073556155-22.58
ADediting_47828chr1_179073562_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4776-5pchr11790735591790735657mer-m8179073543179073566143-24.28
ADediting_47828chr1_179073562_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4800-5pchr11790735601790735667mer-m8179073547179073567141-21.14
ADediting_47829chr1_179073566_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3937chr11790735631790735697mer-m8179073551179073570148-26.75
ADediting_47831chr1_179073584_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1299chr11790735781790735847mer-m8179073564179073585160-21.24
ADediting_47831chr1_179073584_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-514a-5pchr11790735801790735867mer-m8179073564179073587154-18.66
ADediting_47831chr1_179073584_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-518c-5pchr11790735791790735857mer-m8179073564179073586151-21.04
ADediting_47832chr1_179073585_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6813-3pchr11790735801790735867mer-m8179073567179073587140-11.65
ADediting_47835chr1_179073606_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4641chr11790736011790736077mer-m8179073584179073608156-19.5
ADediting_47835chr1_179073606_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-663bchr11790736041790736107mer-m8179073594179073611150-30.9
ADediting_47835chr1_179073606_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6872-3pchr11790735991790736057mer-m8179073586179073606147-25.39
ADediting_47838chr1_179074957_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1913chr11790749551790749617mer-m8179074936179074962153-28.24
ADediting_47838chr1_179074957_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6849-3pchr11790749501790749567mer-m8179074936179074957140-18.57
ADediting_47839chr1_179074961_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4707-3pchr11790749571790749648mer-1a179074943179074964162-27.57
ADediting_47840chr1_179074965_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4485-5pchr11790749591790749668mer-1a179074950179074966157-26.74
ADediting_47842chr1_179074975_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4726-3pchr11790749691790749757mer-m8179074954179074976150-23.19
ADediting_47842chr1_179074975_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-874-5pchr11790749721790749798mer-1a179074957179074979142-16.24
ADediting_47845chr1_179075030_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-222-5pchr11790750241790750318mer-1a179075010179075031143-11.73
ADediting_47845chr1_179075030_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-30a-3pchr11790750261790750338mer-1a179075011179075033159-13.26
ADediting_47845chr1_179075030_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-30d-3pchr11790750261790750338mer-1a179075011179075033154-13.13
ADediting_47845chr1_179075030_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-30e-3pchr11790750261790750338mer-1a179075011179075033159-15.31
ADediting_47845chr1_179075030_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-936chr11790750231790750308mer-1a179075010179075030154-24.05
ADediting_47846chr1_179075031_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-325chr11790750241790750318mer-1a179075005179075031143-15.93
ADediting_47848chr1_179075034_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4325chr11790750311790750388mer-1a179075021179075038143-12.13
ADediting_47849chr1_179075039_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-20a-3pchr11790750321790750398mer-1a179075018179075039151-10.59
ADediting_47854chr1_179075046_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4735-5pchr11790750391790750457mer-m8179075025179075046148-7.51
ADediting_47856chr1_179075053_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1292-3pchr11790750481790750547mer-m8179075036179075055142-19.4
ADediting_47858chr1_179075071_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-140-3pchr11790750661790750727mer-m8179075053179075073152-24.81
ADediting_47860chr1_179075081_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1207-3pchr11790750741790750807mer-m8179075063179075081145-13.53
ADediting_47860chr1_179075081_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-646chr11790750761790750827mer-m8179075064179075083148-21.05
ADediting_47861chr1_179075088_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3943chr11790750851790750917mer-m8179075072179075092150-22.28
ADediting_47862chr1_179075094_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1913chr11790750921790750987mer-m8179075078179075099147-24.36
ADediting_47862chr1_179075094_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6849-3pchr11790750871790750937mer-m8179075073179075094140-15.93
ADediting_47867chr1_179075120_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-331-3pchr11790751141790751207mer-m8179075101179075121141-17.53
ADediting_47867chr1_179075120_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4308chr11790751131790751197mer-m8179075103179075120143-15.6
ADediting_47867chr1_179075120_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4313chr11790751161790751227mer-m8179075104179075123156-21.95
ADediting_47869chr1_179075126_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-10401-3pchr11790751201790751267mer-m8179075108179075127148-19.68
ADediting_47869chr1_179075126_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6803-3pchr11790751211790751277mer-m8179075107179075128161-27.64
ADediting_47871chr1_179075137_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-324-3pchr11790751301790751367mer-m8179075115179075137145-26.24
ADediting_47871chr1_179075137_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4690-3pchr11790751341790751418mer-1a179075122179075141160-25.51
ADediting_47871chr1_179075137_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5685chr11790751341790751418mer-1a179075118179075141154-19.84
ADediting_47873chr1_179075162_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4743-5pchr11790751581790751647mer-m8179075142179075165153-24.3
ADediting_47874chr1_179075174_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-340-3pchr11790751681790751758mer-1a179075154179075175140-16.4
ADediting_47874chr1_179075174_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6827-3pchr11790751681790751758mer-1a179075155179075175147-17.53
ADediting_47876chr1_179075182_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-2114-3pchr11790751781790751847mer-m8179075165179075185140-12.04
ADediting_47876chr1_179075182_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6823-3pchr11790751781790751847mer-m8179075165179075185159-21.45

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1516561chr1_179074869_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3158-3pchr11790748671790748748mer-1a179074853179074874147-14.43
ADediting_1516561chr1_179074869_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3160-5pchr11790748641790748707mer-m8179074849179074871155-15.12
ADediting_1516562chr1_179075113_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-378jchr11790751111790751177mer-m8179075100179075118143-10.72
ADediting_1597665chr1_179074936_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5187-5pchr11790749331790749408mer-1a179074918179074940151-20.32
ADediting_1597665chr1_179074936_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6744-5pchr11790749321790749387mer-m8179074919179074939151-20.6
ADediting_1597666chr1_179074944_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-105-5pchr11790749411790749477mer-m8179074926179074948149-13.95
ADediting_1597666chr1_179074944_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-7853-5pchr11790749411790749477mer-m8179074929179074948144-12.13
ADediting_1597668chr1_179075032_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-153-5pchr11790750291790750357mer-m8179075014179075036144-9.15
ADediting_1597669chr1_179075038_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-129-5pchr11790750351790750417mer-m8179075022179075042148-8.17
ADediting_1597669chr1_179075038_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3680-3pchr11790750331790750408mer-1a179075018179075040140-14.25
ADediting_1597669chr1_179075038_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-9983-3pchr11790750351790750417mer-m8179075021179075042140-6.09
ADediting_47801chr1_179073340_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6843-3pchr11790733331790733408mer-1a179073320179073340140-12.54
ADediting_47801chr1_179073340_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6848-3pchr11790733331790733408mer-1a179073322179073340140-12.64
ADediting_47803chr1_179073347_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3672chr11790733401790733467mer-m8179073324179073347146-9.78
ADediting_47803chr1_179073347_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5586-3pchr11790733441790733507mer-m8179073331179073351148-19.13
ADediting_47803chr1_179073347_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6864-3pchr11790733401790733467mer-m8179073326179073347153-17.84
ADediting_47803chr1_179073347_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-759chr11790733451790733517mer-m8179073332179073352143-13.69
ADediting_47804chr1_179073359_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5189-5pchr11790733531790733597mer-m8179073338179073360153-24.6
ADediting_47804chr1_179073359_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-612chr11790733531790733597mer-m8179073336179073360142-19.92
ADediting_47804chr1_179073359_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-661chr11790733551790733617mer-m8179073339179073362143-17.71
ADediting_47804chr1_179073359_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6860chr11790733531790733597mer-m8179073340179073360150-22.57
ADediting_47804chr1_179073359_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-939-3pchr11790733541790733607mer-m8179073341179073361141-15.63
ADediting_47805chr1_179073377_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1227-3pchr11790733711790733777mer-m8179073359179073378148-22.88
ADediting_47808chr1_179073395_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-377-5pchr11790733931790733997mer-m8179073379179073400155-15.23
ADediting_47808chr1_179073395_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6086chr11790733931790733997mer-m8179073380179073400153-21.13
ADediting_47809chr1_179073396_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-377-5pchr11790733931790733997mer-m8179073379179073400155-15.23
ADediting_47809chr1_179073396_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6086chr11790733931790733997mer-m8179073380179073400153-21.13
ADediting_47810chr1_179073409_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-490-3pchr11790734061790734127mer-m8179073392179073413153-16.86
ADediting_47810chr1_179073409_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6788-5pchr11790734021790734087mer-m8179073389179073409151-23.85
ADediting_47814chr1_179073433_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4478chr11790734301790734367mer-m8179073421179073437155-23.45
ADediting_47814chr1_179073433_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4649-3pchr11790734271790734337mer-m8179073414179073434140-13.83
ADediting_47814chr1_179073433_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-7160-5pchr11790734281790734347mer-m8179073415179073435146-20.41
ADediting_47815chr1_179073440_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4443chr11790734331790734397mer-m8179073425179073440147-19.7
ADediting_47816chr1_179073445_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5690chr11790734421790734487mer-m8179073429179073449145-16.75
ADediting_47818chr1_179073457_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6720-3pchr11790734551790734617mer-m8179073441179073462148-18.9
ADediting_47819chr1_179073477_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1285-3pchr11790734711790734777mer-m8179073457179073478146-17.94
ADediting_47819chr1_179073477_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3187-5pchr11790734711790734777mer-m8179073458179073478155-24.81
ADediting_47819chr1_179073477_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-612chr11790734711790734777mer-m8179073455179073478153-26.5
ADediting_47819chr1_179073477_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6860chr11790734711790734777mer-m8179073457179073478153-25.69
ADediting_47824chr1_179073532_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3190-5pchr11790735261790735327mer-m8179073514179073533147-18.34
ADediting_47824chr1_179073532_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-490-3pchr11790735291790735357mer-m8179073515179073536145-22.16
ADediting_47824chr1_179073532_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-548schr11790735251790735317mer-m8179073511179073532143-12.53
ADediting_47827chr1_179073557_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6765-3pchr11790735541790735618mer-1a179073543179073561141-19.06
ADediting_47827chr1_179073557_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-7851-3pchr11790735531790735597mer-m8179073540179073560149-18.85
ADediting_47829chr1_179073566_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-12114chr11790735621790735687mer-m8179073550179073569144-23.64
ADediting_47829chr1_179073566_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3165chr11790735611790735677mer-m8179073548179073568141-15.87
ADediting_47829chr1_179073566_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3665chr11790735641790735707mer-m8179073554179073571140-17.7
ADediting_47830chr1_179073575_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4478chr11790735721790735787mer-m8179073564179073579149-19.55
ADediting_47830chr1_179073575_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4649-3pchr11790735691790735757mer-m8179073554179073576145-17.51
ADediting_47830chr1_179073575_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-7160-5pchr11790735701790735767mer-m8179073560179073577144-18.41
ADediting_47834chr1_179073603_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6514-3pchr11790735961790736027mer-m8179073583179073603155-17.54
ADediting_47834chr1_179073603_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6847-3pchr11790736011790736077mer-m8179073586179073608153-22.19
ADediting_47835chr1_179073606_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6847-3pchr11790736011790736077mer-m8179073586179073608153-22.19
ADediting_47836chr1_179073770_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4639-5pchr11790737661790737727mer-m8179073752179073773150-14.95
ADediting_47837chr1_179074941_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4731-5pchr11790749371790749437mer-1a179074919179074943145-25.39
ADediting_47837chr1_179074941_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6506-5pchr11790749351790749417mer-m8179074920179074942152-18.46
ADediting_47839chr1_179074961_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6747-3pchr11790749561790749627mer-m8179074942179074963150-22.22
ADediting_47840chr1_179074965_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5001-3pchr11790749601790749667mer-m8179074946179074967149-21.23
ADediting_47841chr1_179074970_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-125a-3pchr11790749671790749748mer-1a179074953179074974152-17.79
ADediting_47842chr1_179074975_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6878-3pchr11790749731790749797mer-m8179074958179074980145-23.52
ADediting_47843chr1_179074980_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3176chr11790749741790749807mer-m8179074959179074981146-20.04
ADediting_47843chr1_179074980_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3922-3pchr11790749741790749807mer-m8179074962179074981152-19.17
ADediting_47843chr1_179074980_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6878-3pchr11790749731790749797mer-m8179074958179074980145-23.52
ADediting_47844chr1_179074994_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3663-5pchr11790749881790749947mer-m8179074976179074995148-23.23
ADediting_47844chr1_179074994_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6131chr11790749891790749957mer-m8179074978179074996140-18.33
ADediting_47844chr1_179074994_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6843-3pchr11790749871790749937mer-m8179074975179074994152-19
ADediting_47844chr1_179074994_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6848-3pchr11790749871790749937mer-m8179074977179074994142-14.3
ADediting_47846chr1_179075031_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-153-5pchr11790750291790750357mer-m8179075014179075036144-9.15
ADediting_47847chr1_179075033_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-153-5pchr11790750291790750357mer-m8179075014179075036144-9.15
ADediting_47848chr1_179075034_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-153-5pchr11790750291790750357mer-m8179075014179075036144-9.15
ADediting_47849chr1_179075039_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-129-5pchr11790750351790750417mer-m8179075022179075042148-8.17
ADediting_47849chr1_179075039_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3680-3pchr11790750331790750408mer-1a179075018179075040140-14.25
ADediting_47849chr1_179075039_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-9983-3pchr11790750351790750417mer-m8179075021179075042140-6.09
ADediting_47850chr1_179075040_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-129-5pchr11790750351790750417mer-m8179075022179075042148-8.17
ADediting_47850chr1_179075040_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3680-3pchr11790750331790750408mer-1a179075018179075040140-14.25
ADediting_47850chr1_179075040_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4775chr11790750381790750458mer-1a179075023179075045153-6.5
ADediting_47850chr1_179075040_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-9983-3pchr11790750351790750417mer-m8179075021179075042140-6.09
ADediting_47851chr1_179075041_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-129-5pchr11790750351790750417mer-m8179075022179075042148-8.17
ADediting_47851chr1_179075041_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4775chr11790750381790750458mer-1a179075023179075045153-6.5
ADediting_47851chr1_179075041_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-9983-3pchr11790750351790750417mer-m8179075021179075042140-6.09
ADediting_47852chr1_179075042_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-129-5pchr11790750351790750417mer-m8179075022179075042148-8.17
ADediting_47852chr1_179075042_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4775chr11790750381790750458mer-1a179075023179075045153-6.5
ADediting_47852chr1_179075042_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-9983-3pchr11790750351790750417mer-m8179075021179075042140-6.09
ADediting_47853chr1_179075045_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-2053chr11790750411790750477mer-m8179075026179075048145-5.81
ADediting_47853chr1_179075045_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4775chr11790750381790750458mer-1a179075023179075045153-6.5
ADediting_47854chr1_179075046_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-2053chr11790750411790750477mer-m8179075026179075048145-5.81
ADediting_47855chr1_179075048_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-2053chr11790750411790750477mer-m8179075026179075048145-5.81
ADediting_47855chr1_179075048_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-874-3pchr11790750461790750527mer-m8179075032179075053140-15.99
ADediting_47856chr1_179075053_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-874-3pchr11790750461790750527mer-m8179075032179075053140-15.99
ADediting_47857chr1_179075061_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4715-3pchr11790750541790750607mer-m8179075039179075061142-18.22
ADediting_47858chr1_179075071_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-7151-3pchr11790750641790750707mer-m8179075053179075071144-17.83
ADediting_47858chr1_179075071_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-8052chr11790750701790750767mer-1a179075056179075076153-27.23
ADediting_47861chr1_179075088_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6778-3pchr11790750841790750907mer-m8179075072179075091141-15.45
ADediting_47863chr1_179075098_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1976chr11790750951790751028mer-1a179075082179075102149-24.39
ADediting_47863chr1_179075098_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6747-3pchr11790750931790751008mer-1a179075078179075100149-23.68
ADediting_47864chr1_179075104_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-8062chr11790751021790751087mer-m8179075089179075109141-10.43
ADediting_47865chr1_179075107_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-8062chr11790751021790751087mer-m8179075089179075109141-10.43
ADediting_47866chr1_179075117_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-378jchr11790751111790751177mer-m8179075100179075118143-10.72
ADediting_47867chr1_179075120_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-1281chr11790751171790751248mer-1a179075108179075124145-18.19
ADediting_47867chr1_179075120_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6791-3pchr11790751161790751227mer-m8179075104179075123152-22.57
ADediting_47867chr1_179075120_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6829-3pchr11790751161790751227mer-m8179075104179075123140-18.69
ADediting_47873chr1_179075162_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3135bchr11790751571790751637mer-m8179075144179075164153-26.16
ADediting_47873chr1_179075162_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-3652chr11790751581790751647mer-m8179075149179075165148-18.74
ADediting_47874chr1_179075174_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-6888-3pchr11790751691790751757mer-m8179075156179075176145-16.11
ADediting_47876chr1_179075182_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5007-5pchr11790751791790751857mer-m8179075165179075186152-18.6

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1337758chr7_5495892_-ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-589-5pchr11790728331790728397mer-m8179072819179072840140-14.49
ADediting_1471003chr9_63819626_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4477bchr11790762401790762467mer-m8179076227179076247146-10.24
ADediting_1535953chr14_101045971_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-381-3pchr11790726261790726327mer-m8179072612179072633145-16.16
ADediting_1535953chr14_101045971_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-381-3pchr11790740801790740867mer-m8179074068179074087149-12.64
ADediting_1556067chr19_40282625_-ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-641chr11790745771790745848mer-1a179074561179074584140-11.63
ADediting_286380chr11_79422188_-ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5579-3pchr11790727271790727337mer-m8179072715179072734160-19.61
ADediting_843620chr2_207754818_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4775chr11790753701790753767mer-m8179075354179075377151-9.5
ADediting_98288chr1_32086990_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5585-3pchr11790742871790742937mer-m8179074271179074294155-20.52
ADediting_98288chr1_32086990_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5585-3pchr11790763511790763577mer-m8179076337179076358149-19.98
ADediting_98289chr1_32086992_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5585-3pchr11790761111790761177mer-m8179076096179076118141-10.17

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_107020chr1_37500952_-ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5581-3pchr11790723271790723337mer-m8179072315179072334152-16.62
ADediting_1337758chr7_5495892_-ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-589-5pchr11790760701790760778mer-1a179076056179076077140-18.97
ADediting_1556067chr19_40282625_-ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-641chr11790722731790722797mer-m8179072260179072280145-19.25
ADediting_1631458chr19_40282624_-ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-641chr11790722731790722797mer-m8179072260179072280145-19.25
ADediting_286380chr11_79422188_-ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-5579-3pchr11790759041790759107mer-m8179075890179075911144-10.05
ADediting_843620chr2_207754818_+ENSG00000116199.12ENST00000263733.5FAM20B-201hsa-miR-4775chr11790750381790750458mer-1a179075023179075045153-6.5

check button Differentially expressed gene-miRNA network
Differentially expressed mRNA-miRNA network
boxplot

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The effects of the RNA editing to the stability of the RNA structures for FAM20B

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000263733.5protein_codingSoverviewSoverview

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
ADediting_47801ENST00000263733.5chr1_179073340_+2764-2092.90-2089.40-2120.30
ADediting_47802ENST00000263733.5chr1_179073341_+2765-2088.90-2089.40-2120.30
ADediting_47803ENST00000263733.5chr1_179073347_+2771-2094.80-2089.40-2120.30
ADediting_47804ENST00000263733.5chr1_179073359_+2783-2088.70-2089.40-2120.30
ADediting_47805ENST00000263733.5chr1_179073377_+2801-2089.00-2089.40-2120.30
ADediting_47806ENST00000263733.5chr1_179073380_+2804-2088.90-2089.40-2120.30
ADediting_47807ENST00000263733.5chr1_179073390_+2814-2088.40-2089.40-2120.30
ADediting_47808ENST00000263733.5chr1_179073395_+2819-2089.10-2089.40-2120.30
ADediting_47809ENST00000263733.5chr1_179073396_+2820-2089.40-2089.40-2120.30
ADediting_47810ENST00000263733.5chr1_179073409_+2833-2093.30-2089.40-2120.30
ADediting_47811ENST00000263733.5chr1_179073415_+2839-2089.10-2089.40-2120.30
ADediting_47812ENST00000263733.5chr1_179073416_+2840-2089.10-2089.40-2120.30
ADediting_47813ENST00000263733.5chr1_179073420_+2844-2088.80-2089.40-2120.30
ADediting_47814ENST00000263733.5chr1_179073433_+2857-2088.70-2089.40-2120.30
ADediting_47815ENST00000263733.5chr1_179073440_+2864-2091.30-2089.40-2120.30
ADediting_47816ENST00000263733.5chr1_179073445_+2869-2089.10-2089.40-2120.30
ADediting_47817ENST00000263733.5chr1_179073455_+2879-2089.40-2089.40-2120.30
ADediting_47818ENST00000263733.5chr1_179073457_+2881-2088.70-2089.40-2120.30
ADediting_47819ENST00000263733.5chr1_179073477_+2901-2089.80-2089.40-2120.30
ADediting_47820ENST00000263733.5chr1_179073481_+2905-2089.50-2089.40-2120.30
ADediting_47821ENST00000263733.5chr1_179073482_+2906-2089.40-2089.40-2120.30
ADediting_47822ENST00000263733.5chr1_179073488_+2912-2095.90-2089.40-2120.30
ADediting_47823ENST00000263733.5chr1_179073496_+2920-2089.10-2089.40-2120.30
ADediting_47824ENST00000263733.5chr1_179073532_+2956-2088.80-2089.40-2120.30
ADediting_47825ENST00000263733.5chr1_179073538_+2962-2096.10-2089.40-2120.30
ADediting_47826ENST00000263733.5chr1_179073552_+2976-2096.60-2089.40-2120.30
ADediting_47827ENST00000263733.5chr1_179073557_+2981-2088.70-2089.40-2120.30
ADediting_47828ENST00000263733.5chr1_179073562_+2986-2088.80-2089.40-2120.30
ADediting_47829ENST00000263733.5chr1_179073566_+2990-2093.30-2089.40-2120.30
ADediting_47830ENST00000263733.5chr1_179073575_+2999-2088.70-2089.40-2120.30
ADediting_47831ENST00000263733.5chr1_179073584_+3008-2089.50-2089.40-2120.30
ADediting_47832ENST00000263733.5chr1_179073585_+3009-2089.40-2089.40-2120.30
ADediting_47833ENST00000263733.5chr1_179073597_+3021-2089.70-2089.40-2120.30
ADediting_47834ENST00000263733.5chr1_179073603_+3027-2089.00-2089.40-2120.30
ADediting_47835ENST00000263733.5chr1_179073606_+3030-2088.50-2089.40-2120.30
ADediting_47836ENST00000263733.5chr1_179073770_+3194-2089.00-2089.40-2120.30
ADediting_1516561ENST00000263733.5chr1_179074869_+4293-2089.40-2089.40-2120.30
ADediting_1597665ENST00000263733.5chr1_179074936_+4360-2089.70-2089.40-2120.30
ADediting_47837ENST00000263733.5chr1_179074941_+4365-2088.70-2089.40-2120.30
ADediting_1597666ENST00000263733.5chr1_179074944_+4368-2089.00-2089.40-2120.30
ADediting_47838ENST00000263733.5chr1_179074957_+4381-2088.50-2089.40-2120.30
ADediting_47839ENST00000263733.5chr1_179074961_+4385-2088.70-2089.40-2120.30
ADediting_47840ENST00000263733.5chr1_179074965_+4389-2094.10-2089.40-2120.30
ADediting_47841ENST00000263733.5chr1_179074970_+4394-2089.00-2089.40-2120.30
ADediting_47842ENST00000263733.5chr1_179074975_+4399-2096.30-2089.40-2120.30
ADediting_47843ENST00000263733.5chr1_179074980_+4404-2088.70-2089.40-2120.30
ADediting_1597667ENST00000263733.5chr1_179074983_+4407-2088.50-2089.40-2120.30
ADediting_47844ENST00000263733.5chr1_179074994_+4418-2088.60-2089.40-2120.30
ADediting_47845ENST00000263733.5chr1_179075030_+4454-2089.50-2089.40-2120.30
ADediting_47846ENST00000263733.5chr1_179075031_+4455-2089.50-2089.40-2120.30
ADediting_1597668ENST00000263733.5chr1_179075032_+4456-2089.50-2089.40-2120.30
ADediting_47847ENST00000263733.5chr1_179075033_+4457-2089.50-2089.40-2120.30
ADediting_47848ENST00000263733.5chr1_179075034_+4458-2089.40-2089.40-2120.30
ADediting_1597669ENST00000263733.5chr1_179075038_+4462-2089.80-2089.40-2120.30
ADediting_47849ENST00000263733.5chr1_179075039_+4463-2089.50-2089.40-2120.30
ADediting_47850ENST00000263733.5chr1_179075040_+4464-2089.50-2089.40-2120.30
ADediting_47851ENST00000263733.5chr1_179075041_+4465-2089.50-2089.40-2120.30
ADediting_47852ENST00000263733.5chr1_179075042_+4466-2089.40-2089.40-2120.30
ADediting_47853ENST00000263733.5chr1_179075045_+4469-2089.10-2089.40-2120.30
ADediting_47854ENST00000263733.5chr1_179075046_+4470-2096.10-2089.40-2120.30
ADediting_47855ENST00000263733.5chr1_179075048_+4472-2089.80-2089.40-2120.30
ADediting_47856ENST00000263733.5chr1_179075053_+4477-2089.00-2089.40-2120.30
ADediting_47857ENST00000263733.5chr1_179075061_+4485-2092.90-2089.40-2120.30
ADediting_47858ENST00000263733.5chr1_179075071_+4495-2089.00-2089.40-2120.30
ADediting_47859ENST00000263733.5chr1_179075077_+4501-2088.70-2089.40-2120.30
ADediting_47860ENST00000263733.5chr1_179075081_+4505-2089.40-2089.40-2120.30
ADediting_47861ENST00000263733.5chr1_179075088_+4512-2088.50-2089.40-2120.30
ADediting_47862ENST00000263733.5chr1_179075094_+4518-2088.50-2089.40-2120.30
ADediting_47863ENST00000263733.5chr1_179075098_+4522-2088.60-2089.40-2120.30
ADediting_47864ENST00000263733.5chr1_179075104_+4528-2089.40-2089.40-2120.30
ADediting_47865ENST00000263733.5chr1_179075107_+4531-2094.80-2089.40-2120.30
ADediting_1597670ENST00000263733.5chr1_179075112_+4536-2088.90-2089.40-2120.30
ADediting_1516562ENST00000263733.5chr1_179075113_+4537-2087.00-2089.40-2120.30
ADediting_47866ENST00000263733.5chr1_179075117_+4541-2093.30-2089.40-2120.30
ADediting_47867ENST00000263733.5chr1_179075120_+4544-2088.50-2089.40-2120.30
ADediting_47868ENST00000263733.5chr1_179075125_+4549-2096.30-2089.40-2120.30
ADediting_47869ENST00000263733.5chr1_179075126_+4550-2089.40-2089.40-2120.30
ADediting_47870ENST00000263733.5chr1_179075133_+4557-2088.70-2089.40-2120.30
ADediting_47871ENST00000263733.5chr1_179075137_+4561-2088.60-2089.40-2120.30
ADediting_1516563ENST00000263733.5chr1_179075142_+4566-2088.60-2089.40-2120.30
ADediting_47872ENST00000263733.5chr1_179075144_+4568-2088.80-2089.40-2120.30
ADediting_1516564ENST00000263733.5chr1_179075157_+4581-2089.00-2089.40-2120.30
ADediting_47873ENST00000263733.5chr1_179075162_+4586-2088.70-2089.40-2120.30
ADediting_47874ENST00000263733.5chr1_179075174_+4598-2088.70-2089.40-2120.30
ADediting_47875ENST00000263733.5chr1_179075180_+4604-2088.50-2089.40-2120.30
ADediting_47876ENST00000263733.5chr1_179075182_+4606-2088.80-2089.40-2120.30

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for FAM20B

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFCADediting_47736chr1_179038208_+0.7362913623158980.0192029814038570.0514012518905881-0.110752276845421.60786665269458e-200.494478509317002
DLPFCADediting_47740chr1_179038290_+0.9241298251617090.005430765305164390.0898287490861227-0.09650833035708846.14628230121624e-190.476033069775176
DLPFCADediting_47744chr1_179038340_+0.959601893242549-0.002888569895354620.0462574011864575-0.1132898794044561.17671793081897e-130.404849309965404
DLPFCADediting_47760chr1_179050850_+0.664813976925354-0.02470449008595650.0130868748061661-0.1407998809048475.17167458717463e-180.464710403153524
DLPFCADediting_47762chr1_179050873_+0.777221126794492-0.01613417047154050.00929409001996214-0.1475161600666681.41032482367951e-200.495121803857284
CERADediting_47803chr1_179073347_+6.03922745953805e-070.3941119313715621.75056024476413e-100.4911789322515450.000177864171412770.301438474947025
CERADediting_47809chr1_179073396_+6.71677356741972e-100.4771071090317672.90151787310535e-170.6194588329258290.03837118049400350.169279448823434
TCXADediting_47809chr1_179073396_+0.0009409598733724710.2673679377429012.91123253305754e-070.4041636691070130.356073556989613-0.0758782944987582
CERADediting_47810chr1_179073409_+1.70248127414432e-070.4113488437054762.46576748024711e-120.5319690880192910.00115553754995690.262848866719681
CERADediting_47811chr1_179073415_+1.22578102484535e-060.3840329450021951.60638730249194e-070.4121169610674650.004399110890644880.231313197827529
IFGADediting_47811chr1_179073415_+0.010197985698850.5040372606150060.003688890532896810.5588103280687790.3026109636509970.214746425134324
CERADediting_47812chr1_179073416_+9.89255248620315e-070.3871208229412955.40120514168102e-090.4539476708984460.0001035074701314210.311657272686475
CERADediting_47814chr1_179073433_+0.0006619485636685880.2749294834769272.2732768785429e-080.4369117207461440.002297190292169470.247131845626253
CERADediting_47816chr1_179073445_+1.34654103173161e-070.414438061715261.67027814482475e-070.4116015284842581.76375097473318e-050.34270442602543
STGADediting_47816chr1_179073445_+0.0004773447988977090.372878511429890.0002050164048109320.3944495601338050.386303953309281-0.0957425913926206
CERADediting_47817chr1_179073455_+9.32037340713766e-090.4475901496351295.4862991427601e-120.5247175795906160.0008984527833446930.268374222317458
TCXADediting_47817chr1_179073455_+0.001645785526247140.2548798272228762.71402399106112e-050.3354456271174990.253983661719759-0.0937187923619469
STGADediting_47817chr1_179073455_+0.001547050254059930.3401430331419910.0002461820541034460.3899031128698650.170043240973739-0.15110755012547
CERADediting_47821chr1_179073482_+0.0001239976060764910.3082893306817067.17817335178828e-050.318361229794230.01675520931071850.195060763056145
CERADediting_47822chr1_179073488_+0.0002948741651477560.2915440685277811.42735533115768e-050.3462034894235210.002340000007212820.246695852593169
CERADediting_47829chr1_179073566_+0.001337989452830430.2595751395266871.13893616951775e-050.3498903665422717.25778745796573e-060.357114966536688
CERADediting_47839chr1_179074961_+3.01870035913357e-050.333625437891614.37677427027574e-120.5267837517519280.0004736844599930910.281929868406539
CERADediting_47840chr1_179074965_+0.06991812872558320.1484060749503890.0001785029760906680.3013695399418750.0001435670950620980.305526772666831
CERADediting_47841chr1_179074970_+4.50066582131983e-050.3266882034872131.84024130712969e-070.4103171137513610.0003387643871141050.288764677084001
CERADediting_47842chr1_179074975_+0.001354281395216760.2593030180570770.001121896518136280.2635036657429981.23963236416944e-050.348512032777436
CERADediting_47848chr1_179075034_+0.00189187672281520.2516706824018111.98039780594523e-090.4653100045591120.0003417182091274230.288589832084851
CERADediting_47853chr1_179075045_+9.43343173742565e-100.4734494125875013.85530167190721e-140.5671052585223562.45080557935628e-060.373832026177122
CERADediting_47854chr1_179075046_+1.84127835884201e-120.5345747085046211.00030196934124e-240.714502490035980.0007518891025509190.272215367069416
CERADediting_47856chr1_179075053_+4.27079769183758e-110.5052854083863661.56085757667921e-200.6654432958998080.03066808530368020.176561903824564
CERADediting_47857chr1_179075061_+2.3863767970757e-050.3376315140805387.2823720462969e-080.4223897442596610.007510926748779830.217474402364254
CERADediting_47858chr1_179075071_+5.31325604521208e-070.395900259086222.6059073038912e-110.5100768512743586.30855135305787e-050.320689201897273
STGADediting_47858chr1_179075071_+0.03356225929967530.2321882809696310.002606849552718860.3244169194262330.252828669810615-0.126157790824641
CERADediting_47859chr1_179075077_+0.0006575262841392480.2750715199060922.43905539969324e-050.3372616992903850.001807423394795320.25272679836115
CERADediting_47860chr1_179075081_+6.75590911004164e-050.3194565275800679.24695530437627e-070.388086421537850.0003975507295136880.285523749780377
CERADediting_47863chr1_179075098_+2.01484383686364e-050.3404820121584559.92356788075889e-090.4468509952823540.03161371706312120.175589544557365
STGADediting_47863chr1_179075098_+0.02575714536004420.2432745950585770.000548980392908110.369162130622160.23852070092087-0.130007237258695
CERADediting_47865chr1_179075107_+2.78465558001276e-060.3719134146471841.71914410231399e-110.5140541350957880.0006898762285870380.274052157116484
CERADediting_47866chr1_179075117_+9.14280060222566e-060.3534351452521583.26985358278986e-120.5294295616334247.89135721285173e-050.316641448682881
CERADediting_47868chr1_179075125_+0.0004904716832158760.281209813350551.71316992112065e-090.466917728722991.67955995549742e-050.34351688145564

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC1.07683523993284e-250.5479926396030041.82173769639492e-120.3861949167043711.54743418253544e-170.45871628847682
AC6.84351199170135e-1110.9314685265648413.64802412138087e-910.8995151043924887.94557344662903e-080.331535314467112
PCC2.92923070313141e-620.8776103309018683.0777485598271e-700.9004161107912540.1454148928500240.105745182773309
CER1.88771970811106e-500.8829148849589954.60749069121731e-320.7810009461017240.01245677533997030.203598444699062
TCX9.04395766946471e-490.8762009286667246.56526467014219e-320.7798073475961270.323160993170188-0.0812145206516744
FP3.2112793057241e-200.6191482421832081.53489266092825e-300.726939567587240.960429814963724-0.00374511535879251
IFG1.07327671047609e-050.7593879632485510.0004053671493965750.6527081803762410.855673964110406-0.038325594736981
PG3.47303717694403e-650.8915092891972951.75149922979806e-380.7747539284292510.257223309685749-0.0834917181496608
STG7.50007163911774e-170.7574904509210997.45578963273054e-180.7726186705407110.402332037145983-0.0925653509360438

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Relation with AD stages for FAM20B

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.
CERADediting_47803chr1_179073347_+9.60404535076886e-050.366436911171621
CERADediting_47809chr1_179073396_+2.12916825672896e-050.396741267082012
CERADediting_47817chr1_179073455_+0.0009822647972447720.312759691195301
CERADediting_47827chr1_179073557_+0.001064126316853670.310726139018966
CERADediting_47829chr1_179073566_+0.000689083612258870.321598237707605
CERADediting_47840chr1_179074965_+4.43872469647143e-050.382334973436662
CERADediting_47841chr1_179074970_+0.0003612350579821950.337046892234495
CERADediting_47842chr1_179074975_+0.0004618242139889810.331265459502498
CERADediting_47853chr1_179075045_+2.9317528142032e-050.390550842644808
CERADediting_47854chr1_179075046_+5.25568673179676e-060.422457295220648
CERADediting_47858chr1_179075071_+0.0009495103500592690.313616971211243
CERADediting_47863chr1_179075098_+0.001011239624780410.312022813636573
CERADediting_47865chr1_179075107_+0.0001179137821479560.362067654531866
CERADediting_47866chr1_179075117_+1.54843118506957e-050.402784776779383
CERADediting_47868chr1_179075125_+3.65600679035342e-050.386204930997317
TCXADediting_47810chr1_179073409_+0.001617315193258320.302598919999774
TCXADediting_47828chr1_179073562_+0.0003728888751852950.339346505800243
TCXADediting_47829chr1_179073566_+0.0008719905029119890.318635771377277
TCXADediting_47853chr1_179075045_+0.000448322245180820.334976244743564
TCXADediting_47863chr1_179075098_+0.0006698478139445060.325222267097712
TCXADediting_47865chr1_179075107_+0.001403658542334070.306356474252727
TCXADediting_47866chr1_179075117_+0.0002603392437974060.347690108617666
IFGADediting_47857chr1_179075061_+0.0271200769755992-0.441565671911202
IFGADediting_47858chr1_179075071_+0.0326702049086005-0.428316353345691
IFGADediting_47863chr1_179075098_+0.00449464709566665-0.548850985806576

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.
CER0.000485071497040030.330095971652731

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RelatedDrugs for FAM20B

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for FAM20B

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource