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![]() | Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for RASSF2 |
Gene summary |
| Gene information | Gene symbol | RASSF2 | Gene ID | 9770 |
| Gene name | Ras association domain family member 2 | |
| Synonyms | CENP-34|RASFADIN | |
| Cytomap | 20p13 | |
| Type of gene | protein-coding | |
| Description | ras association domain-containing protein 2Ras association (RalGDS/AF-6) domain family 2Ras association (RalGDS/AF-6) domain family member 2centromere protein 34 | |
| Modification date | 20200313 | |
| UniProtAcc | P50749, | |
| Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| RASSF2 | GO:0031954 | positive regulation of protein autophosphorylation | 19962960 |
| RASSF2 | GO:0033137 | negative regulation of peptidyl-serine phosphorylation | 19962960 |
| RASSF2 | GO:0043065 | positive regulation of apoptotic process | 19962960 |
| RASSF2 | GO:0045860 | positive regulation of protein kinase activity | 19962960 |
| RASSF2 | GO:0046330 | positive regulation of JNK cascade | 19962960 |
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RNA A-to-I events for RASSF2 |
RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA editing frequencies across three data sets. |
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The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA A-to-I editing events in AD. |
| ADediting_941024(4793752, -), ADediting_941025(4803130, -), ADediting_941026(4803588, -), ADediting_941027(4803608, -), ADediting_941028(4803635, -), ADediting_941029(4803641, -), ADediting_941030(4803649, -), ADediting_941031(4803662, -), ADediting_941032(4803671, -), ADediting_941033(4803674, -), ADediting_941034(4803726, -), ADediting_941035(4803802, -), ADediting_941036(4803841, -), ADediting_941037(4804449, -), ADediting_941038(4804462, -), ADediting_941039(4804470, -), ADediting_941040(4804475, -), ADediting_941041(4804476, -), ADediting_941042(4804502, -), ADediting_941043(4804558, -), ADediting_941044(4804576, -), ADediting_941045(4804606, -), ADediting_941046(4806600, -), ADediting_941047(4806604, -), ADediting_941048(4806647, -), ADediting_941049(4808571, -), ADediting_941050(4808578, -), ADediting_941051(4808589, -), ADediting_941052(4808597, -), ADediting_941053(4808602, -), ADediting_941054(4808608, -), ADediting_941055(4808611, -), ADediting_941056(4808619, -), ADediting_941057(4808685, -), ADediting_941058(4808699, -), ADediting_941059(4808771, -), ADediting_941060(4816109, -), ADediting_941061(4817019, -), ADediting_941062(4817022, -), ADediting_941063(4818032, -), ADediting_941064(4818101, -), ADediting_941065(4818190, -), ADediting_941066(4818207, -), ADediting_941067(4819052, -), ADediting_941068(4819059, -), ADediting_941069(4819060, -), ADediting_941070(4819087, -), ADediting_941071(4819100, -), ADediting_941072(4819101, -), ADediting_941073(4819145, -), ADediting_941074(4819181, -), ADediting_941075(4820254, -), ADediting_941076(4820287, -), ADediting_941077(4820428, -), ADediting_1567294(4793755, -), ADediting_1567295(4794256, -), ADediting_1567296(4794259, -), ADediting_1567297(4794702, -), ADediting_1567298(4803012, -), ADediting_1567299(4803156, -), ADediting_1567300(4803183, -), ADediting_1567301(4803184, -), ADediting_1567302(4803909, -), ADediting_1567303(4804027, -), ADediting_1567304(4806542, -), ADediting_1567305(4806577, -), ADediting_1567306(4806646, -), ADediting_1567307(4811097, -), ADediting_1567308(4811149, -), ADediting_1567309(4811181, -), ADediting_1567310(4811227, -), ADediting_1567311(4811235, -), ADediting_1567312(4811251, -), ADediting_1567313(4811268, -), ADediting_1567314(4811269, -), ADediting_1567315(4811288, -), ADediting_1567316(4811307, -), ADediting_1567317(4816129, -), ADediting_1567318(4816130, -), ADediting_1567319(4816136, -), ADediting_1567320(4816179, -), ADediting_1567321(4816270, -), ADediting_1567322(4816275, -), ADediting_1567323(4819039, -), ADediting_1641018(4819074, -), |
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RNA editing positional annotations for RASSF2 using Annovar |
Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_941024 | chr20_4793752_- | intronic |
| ADediting_941025 | chr20_4803130_- | intronic |
| ADediting_941026 | chr20_4803588_- | intronic |
| ADediting_941027 | chr20_4803608_- | intronic |
| ADediting_941028 | chr20_4803635_- | intronic |
| ADediting_941029 | chr20_4803641_- | intronic |
| ADediting_941030 | chr20_4803649_- | intronic |
| ADediting_941031 | chr20_4803662_- | intronic |
| ADediting_941032 | chr20_4803671_- | intronic |
| ADediting_941033 | chr20_4803674_- | intronic |
| ADediting_941034 | chr20_4803726_- | intronic |
| ADediting_941035 | chr20_4803802_- | intronic |
| ADediting_941036 | chr20_4803841_- | intronic |
| ADediting_941037 | chr20_4804449_- | intronic |
| ADediting_941038 | chr20_4804462_- | intronic |
| ADediting_941039 | chr20_4804470_- | intronic |
| ADediting_941040 | chr20_4804475_- | intronic |
| ADediting_941041 | chr20_4804476_- | intronic |
| ADediting_941042 | chr20_4804502_- | intronic |
| ADediting_941043 | chr20_4804558_- | intronic |
| ADediting_941044 | chr20_4804576_- | intronic |
| ADediting_941045 | chr20_4804606_- | intronic |
| ADediting_941046 | chr20_4806600_- | intronic |
| ADediting_941047 | chr20_4806604_- | intronic |
| ADediting_941048 | chr20_4806647_- | intronic |
| ADediting_941049 | chr20_4808571_- | intronic |
| ADediting_941050 | chr20_4808578_- | intronic |
| ADediting_941051 | chr20_4808589_- | intronic |
| ADediting_941052 | chr20_4808597_- | intronic |
| ADediting_941053 | chr20_4808602_- | intronic |
| ADediting_941054 | chr20_4808608_- | intronic |
| ADediting_941055 | chr20_4808611_- | intronic |
| ADediting_941056 | chr20_4808619_- | intronic |
| ADediting_941057 | chr20_4808685_- | intronic |
| ADediting_941058 | chr20_4808699_- | intronic |
| ADediting_941059 | chr20_4808771_- | intronic |
| ADediting_941060 | chr20_4816109_- | intronic |
| ADediting_941061 | chr20_4817019_- | intronic |
| ADediting_941062 | chr20_4817022_- | intronic |
| ADediting_941063 | chr20_4818032_- | intronic |
| ADediting_941064 | chr20_4818101_- | intronic |
| ADediting_941065 | chr20_4818190_- | intronic |
| ADediting_941066 | chr20_4818207_- | intronic |
| ADediting_941067 | chr20_4819052_- | intronic |
| ADediting_941068 | chr20_4819059_- | intronic |
| ADediting_941069 | chr20_4819060_- | intronic |
| ADediting_941070 | chr20_4819087_- | intronic |
| ADediting_941071 | chr20_4819100_- | intronic |
| ADediting_941072 | chr20_4819101_- | intronic |
| ADediting_941073 | chr20_4819145_- | intronic |
| ADediting_941074 | chr20_4819181_- | intronic |
| ADediting_941075 | chr20_4820254_- | intronic |
| ADediting_941076 | chr20_4820287_- | intronic |
| ADediting_941077 | chr20_4820428_- | intronic |
| ADediting_1567294 | chr20_4793755_- | intronic |
| ADediting_1567295 | chr20_4794256_- | intronic |
| ADediting_1567296 | chr20_4794259_- | intronic |
| ADediting_1567297 | chr20_4794702_- | intronic |
| ADediting_1567298 | chr20_4803012_- | intronic |
| ADediting_1567299 | chr20_4803156_- | intronic |
| ADediting_1567300 | chr20_4803183_- | intronic |
| ADediting_1567301 | chr20_4803184_- | intronic |
| ADediting_1567302 | chr20_4803909_- | intronic |
| ADediting_1567303 | chr20_4804027_- | intronic |
| ADediting_1567304 | chr20_4806542_- | intronic |
| ADediting_1567305 | chr20_4806577_- | intronic |
| ADediting_1567306 | chr20_4806646_- | intronic |
| ADediting_1567307 | chr20_4811097_- | intronic |
| ADediting_1567308 | chr20_4811149_- | intronic |
| ADediting_1567309 | chr20_4811181_- | intronic |
| ADediting_1567310 | chr20_4811227_- | intronic |
| ADediting_1567311 | chr20_4811235_- | intronic |
| ADediting_1567312 | chr20_4811251_- | intronic |
| ADediting_1567313 | chr20_4811268_- | intronic |
| ADediting_1567314 | chr20_4811269_- | intronic |
| ADediting_1567315 | chr20_4811288_- | intronic |
| ADediting_1567316 | chr20_4811307_- | intronic |
| ADediting_1567317 | chr20_4816129_- | intronic |
| ADediting_1567318 | chr20_4816130_- | intronic |
| ADediting_1567319 | chr20_4816136_- | intronic |
| ADediting_1567320 | chr20_4816179_- | intronic |
| ADediting_1567321 | chr20_4816270_- | intronic |
| ADediting_1567322 | chr20_4816275_- | intronic |
| ADediting_1567323 | chr20_4819039_- | intronic |
| ADediting_1641018 | chr20_4819074_- | intronic |
Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_941024 | chr20_4793752_- | SINE | Alu | Name=AluJb |
| ADediting_941025 | chr20_4803130_- | SINE | Alu | Name=AluJb |
| ADediting_941026 | chr20_4803588_- | SINE | Alu | Name=AluJr4 |
| ADediting_941027 | chr20_4803608_- | SINE | Alu | Name=AluJr4 |
| ADediting_941028 | chr20_4803635_- | SINE | Alu | Name=AluJr4 |
| ADediting_941029 | chr20_4803641_- | SINE | Alu | Name=AluJr4 |
| ADediting_941030 | chr20_4803649_- | SINE | Alu | Name=AluJr4 |
| ADediting_941031 | chr20_4803662_- | SINE | Alu | Name=AluJr4 |
| ADediting_941032 | chr20_4803671_- | SINE | Alu | Name=AluJr4 |
| ADediting_941033 | chr20_4803674_- | SINE | Alu | Name=AluJr4 |
| ADediting_941034 | chr20_4803726_- | SINE | Alu | Name=AluJr4 |
| ADediting_941035 | chr20_4803802_- | SINE | Alu | Name=AluJb |
| ADediting_941036 | chr20_4803841_- | SINE | Alu | Name=AluJb |
| ADediting_941037 | chr20_4804449_- | SINE | Alu | Name=AluSx |
| ADediting_941038 | chr20_4804462_- | SINE | Alu | Name=AluSx |
| ADediting_941039 | chr20_4804470_- | SINE | Alu | Name=AluSx |
| ADediting_941040 | chr20_4804475_- | SINE | Alu | Name=AluSx |
| ADediting_941041 | chr20_4804476_- | SINE | Alu | Name=AluSx |
| ADediting_941042 | chr20_4804502_- | SINE | Alu | Name=AluSx |
| ADediting_941043 | chr20_4804558_- | SINE | Alu | Name=AluSx |
| ADediting_941044 | chr20_4804576_- | SINE | Alu | Name=AluSx |
| ADediting_941045 | chr20_4804606_- | SINE | Alu | Name=AluSx |
| ADediting_941046 | chr20_4806600_- | SINE | Alu | Name=AluJr |
| ADediting_941047 | chr20_4806604_- | SINE | Alu | Name=AluJr |
| ADediting_941048 | chr20_4806647_- | SINE | Alu | Name=AluJr |
| ADediting_941049 | chr20_4808571_- | SINE | Alu | Name=AluJr |
| ADediting_941050 | chr20_4808578_- | SINE | Alu | Name=AluJr |
| ADediting_941051 | chr20_4808589_- | SINE | Alu | Name=AluJr |
| ADediting_941052 | chr20_4808597_- | SINE | Alu | Name=AluJr |
| ADediting_941053 | chr20_4808602_- | SINE | Alu | Name=AluJr |
| ADediting_941054 | chr20_4808608_- | SINE | Alu | Name=AluJr |
| ADediting_941055 | chr20_4808611_- | SINE | Alu | Name=AluJr |
| ADediting_941056 | chr20_4808619_- | SINE | Alu | Name=AluJr |
| ADediting_941057 | chr20_4808685_- | SINE | Alu | Name=AluJr |
| ADediting_941058 | chr20_4808699_- | SINE | Alu | Name=AluJr |
| ADediting_941059 | chr20_4808771_- | SINE | Alu | Name=AluJr |
| ADediting_941060 | chr20_4816109_- | SINE | Alu | Name=AluJr |
| ADediting_941061 | chr20_4817019_- | SINE | Alu | Name=AluSq2 |
| ADediting_941062 | chr20_4817022_- | SINE | Alu | Name=AluSq2 |
| ADediting_941063 | chr20_4818032_- | SINE | Alu | Name=AluSz |
| ADediting_941064 | chr20_4818101_- | SINE | Alu | Name=AluSz |
| ADediting_941065 | chr20_4818190_- | SINE | Alu | Name=AluSz |
| ADediting_941066 | chr20_4818207_- | SINE | Alu | Name=AluSz |
| ADediting_941067 | chr20_4819052_- | SINE | Alu | Name=AluSq2 |
| ADediting_941068 | chr20_4819059_- | SINE | Alu | Name=AluSq2 |
| ADediting_941069 | chr20_4819060_- | SINE | Alu | Name=AluSq2 |
| ADediting_941070 | chr20_4819087_- | SINE | Alu | Name=AluSq2 |
| ADediting_941071 | chr20_4819100_- | SINE | Alu | Name=AluSq2 |
| ADediting_941072 | chr20_4819101_- | SINE | Alu | Name=AluSq2 |
| ADediting_941073 | chr20_4819145_- | SINE | Alu | Name=AluSq2 |
| ADediting_941074 | chr20_4819181_- | SINE | Alu | Name=AluSq2 |
| ADediting_941075 | chr20_4820254_- | SINE | Alu | Name=AluJr |
| ADediting_941076 | chr20_4820287_- | SINE | Alu | Name=AluJr |
| ADediting_941077 | chr20_4820428_- | SINE | Alu | Name=AluJr |
| ADediting_1567294 | chr20_4793755_- | SINE | Alu | Name=AluJb |
| ADediting_1567295 | chr20_4794256_- | SINE | Alu | Name=AluJr |
| ADediting_1567296 | chr20_4794259_- | SINE | Alu | Name=AluJr |
| ADediting_1567297 | chr20_4794702_- | SINE | Alu | Name=AluJr |
| ADediting_1567298 | chr20_4803012_- | SINE | Alu | Name=AluJb |
| ADediting_1567299 | chr20_4803156_- | SINE | Alu | Name=AluJb |
| ADediting_1567300 | chr20_4803183_- | SINE | Alu | Name=AluJb |
| ADediting_1567301 | chr20_4803184_- | SINE | Alu | Name=AluJb |
| ADediting_1567302 | chr20_4803909_- | SINE | Alu | Name=AluJb |
| ADediting_1567303 | chr20_4804027_- | SINE | Alu | Name=AluJb |
| ADediting_1567304 | chr20_4806542_- | SINE | Alu | Name=AluJr |
| ADediting_1567305 | chr20_4806577_- | SINE | Alu | Name=AluJr |
| ADediting_1567306 | chr20_4806646_- | SINE | Alu | Name=AluJr |
| ADediting_1567307 | chr20_4811097_- | SINE | Alu | Name=AluJr4 |
| ADediting_1567308 | chr20_4811149_- | SINE | Alu | Name=AluJr4 |
| ADediting_1567309 | chr20_4811181_- | SINE | Alu | Name=AluJr4 |
| ADediting_1567310 | chr20_4811227_- | SINE | Alu | Name=AluJr4 |
| ADediting_1567311 | chr20_4811235_- | SINE | Alu | Name=AluJr4 |
| ADediting_1567312 | chr20_4811251_- | SINE | Alu | Name=AluJr4 |
| ADediting_1567313 | chr20_4811268_- | SINE | Alu | Name=AluJr4 |
| ADediting_1567314 | chr20_4811269_- | SINE | Alu | Name=AluJr4 |
| ADediting_1567315 | chr20_4811288_- | SINE | Alu | Name=AluJr4 |
| ADediting_1567316 | chr20_4811307_- | SINE | Alu | Name=AluJr4 |
| ADediting_1567317 | chr20_4816129_- | SINE | Alu | Name=AluJr |
| ADediting_1567318 | chr20_4816130_- | SINE | Alu | Name=AluJr |
| ADediting_1567319 | chr20_4816136_- | SINE | Alu | Name=AluJr |
| ADediting_1567320 | chr20_4816179_- | SINE | Alu | Name=AluJr |
| ADediting_1567321 | chr20_4816270_- | SINE | Alu | Name=AluJr |
| ADediting_1567322 | chr20_4816275_- | SINE | Alu | Name=AluJr |
| ADediting_1567323 | chr20_4819039_- | SINE | Alu | Name=AluSq2 |
| ADediting_1641018 | chr20_4819074_- | SINE | Alu | Name=AluSq2 |
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RNA A-to-I editing events in the alternative splicing sites for RASSF2 |
RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| ES | ADediting_941026 | chr20_4803588_- | 4803584:4803606 | 3ss | 2i | TTTTAAATTTTTTTTTGTAGAGA | 8.60 | TTTTAAATTTTTTTTTGTGGAGA | 0.65 |
| ES | ADediting_941026 | chr20_4803588_- | 4803584:4803606 | 3ss | 2i | TTTTAAATTTTTTTTTGTAGAGA | 8.60 | TTTTAAATTTTTTTTTGTGGAGA | 0.65 |
| ME2 | ADediting_941026 | chr20_4803588_- | 4803584:4803606 | 3ss | 2i | TTTTAAATTTTTTTTTGTAGAGA | 8.60 | TTTTAAATTTTTTTTTGTGGAGA | 0.65 |
| ME2 | ADediting_941026 | chr20_4803588_- | 4803584:4803606 | 3ss | 2i | TTTTAAATTTTTTTTTGTAGAGA | 8.60 | TTTTAAATTTTTTTTTGTGGAGA | 0.65 |
Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RASSF2 |
Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.* The grey color means N/A. |
Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for RASSF2 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for RASSF2 |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000101265.16 | ENST00000379376.2 | RASSF2-201 | hsa-miR-381-3p | chr20 | 4783732 | 4783738 | 7mer-m8 | 4783731 | 4783752 | 162 | -19.52 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000101265.16 | ENST00000379400.8 | RASSF2-202 | hsa-miR-381-3p | chr20 | 4783732 | 4783738 | 7mer-m8 | 4783731 | 4783752 | 162 | -19.52 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000101265.16 | ENST00000379376.2 | RASSF2-201 | hsa-miR-641 | chr20 | 4783404 | 4783411 | 8mer-1a | 4783404 | 4783427 | 140 | -13.01 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000101265.16 | ENST00000379400.8 | RASSF2-202 | hsa-miR-641 | chr20 | 4783404 | 4783411 | 8mer-1a | 4783404 | 4783427 | 140 | -13.01 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000101265.16 | ENST00000379376.2 | RASSF2-201 | hsa-miR-4775 | chr20 | 4783891 | 4783897 | 7mer-m8 | 4783890 | 4783913 | 158 | -15.84 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000101265.16 | ENST00000379400.8 | RASSF2-202 | hsa-miR-4775 | chr20 | 4783891 | 4783897 | 7mer-m8 | 4783890 | 4783913 | 158 | -15.84 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337758 | chr7_5495892_- | ENSG00000101265.16 | ENST00000379376.2 | RASSF2-201 | hsa-miR-589-5p | chr20 | 4783782 | 4783788 | 7mer-m8 | 4783781 | 4783800 | 155 | -18.7 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000101265.16 | ENST00000379400.8 | RASSF2-202 | hsa-miR-589-5p | chr20 | 4783782 | 4783788 | 7mer-m8 | 4783781 | 4783800 | 155 | -18.7 |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for RASSF2 |
- RNA A-to-I editing in mRNA.* Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for RASSF2 |
Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_941038 | chr20_4804462_- | 0.422062184836955 | 0.0457597094327485 | 0.989468061746236 | 0.000752762448662081 | 3.5156596952693e-09 | 0.32744145705539 |
| DLPFC | ADediting_941063 | chr20_4818032_- | 0.992241037912232 | 0.000554558712523038 | 0.181525661022051 | -0.0760811278845739 | 1.76652870645557e-10 | 0.352131272789266 |
| DLPFC | ADediting_941065 | chr20_4818190_- | 0.630274241700643 | 0.0274440425892925 | 0.0356408560629459 | -0.119384053928738 | 2.74053767905821e-21 | 0.50304875185351 |
| DLPFC | ADediting_941066 | chr20_4818207_- | 0.21307487274573 | 0.0709174544084308 | 0.13640914552383 | -0.0847765265306367 | 2.93711457042129e-24 | 0.534068921383869 |
| TCX | ADediting_941075 | chr20_4820254_- | 0.139696745855834 | 0.121158959705615 | 0.367772273057545 | -0.0740565711426859 | 0.00011229615678705 | 0.310142642208679 |
Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.67376476443262e-05 | 0.241817141990965 | 0.0308113282194682 | 0.122683339451535 | 6.90174565056393e-11 | 0.359464925993255 |
| AC | 3.7627788638603e-31 | 0.647907471999657 | 2.41810824133351e-18 | 0.515097591813717 | 1.37879366551974e-32 | 0.659524027240421 |
| CER | 7.80879644546328e-08 | 0.421497103019845 | 0.087882826874511 | 0.139833552197631 | 3.09433382662751e-09 | 0.460307311646856 |
| TCX | 0.0852881645487296 | 0.140979012246932 | 2.40632870879252e-06 | -0.374106172235618 | 4.07288908115027e-24 | 0.70795358743168 |
| FP | 1.35252437767359e-05 | 0.319800029848414 | 0.018026580153189 | 0.177113629720358 | 3.01360193708661e-14 | 0.529415170964202 |
| IFG | 0.928432206407558 | 0.0189311634213564 | 0.148642919515088 | -0.297511138168023 | 0.00535591256426035 | 0.539753079851347 |
| PG | 1.09975966877702e-23 | 0.649717019660005 | 1.35644369432365e-07 | 0.374834601828524 | 8.26950448934627e-06 | 0.320384310281662 |
| STG | 4.5150358285087e-08 | 0.554231603004372 | 0.019898494791018 | 0.2536643372815 | 1.17199529440356e-07 | 0.539714192555666 |
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Relation with AD stages for RASSF2 |
Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| TCX | ADediting_941075 | chr20_4820254_- | 0.00165681967473711 | 0.30195399230433 |
Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for RASSF2 |
Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RASSF2 |
Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| RASSF2 | C0024232 | Lymphatic Metastasis | 1 | CTD_human |
| RASSF2 | C0027439 | Nasopharyngeal Neoplasms | 1 | CTD_human |
| RASSF2 | C0238301 | Cancer of Nasopharynx | 1 | CTD_human |
| RASSF2 | C1527249 | Colorectal Cancer | 1 | UNIPROT |