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![]() | Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for DHX34 |
Gene summary |
| Gene information | Gene symbol | DHX34 | Gene ID | 9704 |
| Gene name | DExH-box helicase 34 | |
| Synonyms | DDX34|HRH1 | |
| Cytomap | 19q13.32 | |
| Type of gene | protein-coding | |
| Description | probable ATP-dependent RNA helicase DHX34DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 34DEAH (Asp-Glu-Ala-His) box polypeptide 34DEAH box protein 34DEAH-box helicase 34probable ATP-dependent helicase DHX34 | |
| Modification date | 20200322 | |
| UniProtAcc | Q14147, | |
| Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for DHX34 |
RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA editing frequencies across three data sets. |
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The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA A-to-I editing events in AD. |
| ADediting_767841(47350319, +), ADediting_767842(47350324, +), ADediting_767843(47350348, +), ADediting_767844(47350502, +), ADediting_767845(47350521, +), ADediting_767846(47350522, +), ADediting_767847(47350539, +), ADediting_767848(47350561, +), ADediting_767849(47350563, +), ADediting_767850(47350567, +), ADediting_767851(47350605, +), ADediting_767852(47350629, +), ADediting_767853(47350654, +), ADediting_767854(47350672, +), ADediting_767855(47350681, +), ADediting_767856(47350682, +), ADediting_767857(47351202, +), ADediting_767858(47351259, +), ADediting_767859(47351271, +), ADediting_767860(47352414, +), ADediting_767861(47352421, +), ADediting_767862(47352427, +), ADediting_767863(47352442, +), ADediting_767864(47352443, +), ADediting_767865(47352466, +), ADediting_767866(47352469, +), ADediting_767867(47352481, +), ADediting_767868(47352494, +), ADediting_767869(47352528, +), ADediting_767870(47352554, +), ADediting_767871(47352560, +), ADediting_767872(47352577, +), ADediting_767873(47352595, +), ADediting_767874(47352600, +), ADediting_767875(47352657, +), ADediting_767876(47354790, +), ADediting_767877(47355731, +), ADediting_767878(47356712, +), ADediting_767879(47356734, +), ADediting_767880(47357516, +), ADediting_767881(47359769, +), ADediting_767882(47360772, +), ADediting_767883(47360797, +), ADediting_767884(47360798, +), ADediting_767885(47360813, +), ADediting_767886(47361224, +), ADediting_767887(47361225, +), ADediting_767888(47361244, +), ADediting_767889(47361262, +), ADediting_767890(47361297, +), ADediting_767891(47361298, +), ADediting_767892(47361299, +), ADediting_767893(47361315, +), ADediting_767894(47361324, +), ADediting_767895(47361337, +), ADediting_767896(47361351, +), ADediting_767897(47361672, +), ADediting_767898(47362146, +), ADediting_767899(47363044, +), ADediting_767900(47363050, +), ADediting_767901(47363051, +), ADediting_767902(47363068, +), ADediting_767903(47363077, +), ADediting_767904(47363080, +), ADediting_767905(47363161, +), ADediting_767906(47363228, +), ADediting_767907(47363234, +), ADediting_767908(47363338, +), ADediting_767909(47363556, +), ADediting_767910(47363562, +), ADediting_767911(47363563, +), ADediting_767912(47363571, +), ADediting_767913(47363584, +), ADediting_767914(47363589, +), ADediting_767915(47363598, +), ADediting_767916(47363634, +), ADediting_767917(47363655, +), ADediting_767918(47363661, +), ADediting_767919(47363664, +), ADediting_767920(47363666, +), ADediting_767921(47363667, +), ADediting_767922(47363668, +), ADediting_767923(47363671, +), ADediting_767924(47363697, +), ADediting_767925(47363698, +), ADediting_767926(47363773, +), ADediting_767927(47363803, +), ADediting_767928(47364532, +), ADediting_767929(47364536, +), ADediting_767930(47364551, +), ADediting_767931(47364656, +), ADediting_767932(47364663, +), ADediting_767933(47365316, +), ADediting_767934(47365332, +), ADediting_767935(47365345, +), ADediting_767936(47365351, +), ADediting_767937(47365352, +), ADediting_767938(47365452, +), ADediting_767939(47365486, +), ADediting_767940(47365514, +), ADediting_767941(47366344, +), ADediting_767942(47366345, +), ADediting_767943(47366374, +), ADediting_767944(47366381, +), ADediting_767945(47366461, +), ADediting_767946(47366501, +), ADediting_767947(47366503, +), ADediting_767948(47366549, +), ADediting_767949(47366754, +), ADediting_767950(47368817, +), ADediting_767951(47368953, +), ADediting_1556994(47350313, +), ADediting_1556995(47350694, +), ADediting_1556996(47351393, +), ADediting_1556997(47352584, +), ADediting_1556998(47363312, +), ADediting_1556999(47363326, +), ADediting_1557000(47363330, +), ADediting_1557001(47363353, +), ADediting_1557002(47363356, +), ADediting_1557003(47368783, +), ADediting_1557004(47368843, +), |
Top |
RNA editing positional annotations for DHX34 using Annovar |
Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_767841 | chr19_47350319_+ | intronic |
| ADediting_767842 | chr19_47350324_+ | intronic |
| ADediting_767843 | chr19_47350348_+ | intronic |
| ADediting_767844 | chr19_47350502_+ | intronic |
| ADediting_767845 | chr19_47350521_+ | intronic |
| ADediting_767846 | chr19_47350522_+ | intronic |
| ADediting_767847 | chr19_47350539_+ | intronic |
| ADediting_767848 | chr19_47350561_+ | intronic |
| ADediting_767849 | chr19_47350563_+ | intronic |
| ADediting_767850 | chr19_47350567_+ | intronic |
| ADediting_767851 | chr19_47350605_+ | intronic |
| ADediting_767852 | chr19_47350629_+ | intronic |
| ADediting_767853 | chr19_47350654_+ | intronic |
| ADediting_767854 | chr19_47350672_+ | intronic |
| ADediting_767855 | chr19_47350681_+ | intronic |
| ADediting_767856 | chr19_47350682_+ | intronic |
| ADediting_767857 | chr19_47351202_+ | intronic |
| ADediting_767858 | chr19_47351259_+ | intronic |
| ADediting_767859 | chr19_47351271_+ | intronic |
| ADediting_767860 | chr19_47352414_+ | intronic |
| ADediting_767861 | chr19_47352421_+ | intronic |
| ADediting_767862 | chr19_47352427_+ | intronic |
| ADediting_767863 | chr19_47352442_+ | intronic |
| ADediting_767864 | chr19_47352443_+ | intronic |
| ADediting_767865 | chr19_47352466_+ | intronic |
| ADediting_767866 | chr19_47352469_+ | intronic |
| ADediting_767867 | chr19_47352481_+ | intronic |
| ADediting_767868 | chr19_47352494_+ | intronic |
| ADediting_767869 | chr19_47352528_+ | intronic |
| ADediting_767870 | chr19_47352554_+ | intronic |
| ADediting_767871 | chr19_47352560_+ | intronic |
| ADediting_767872 | chr19_47352577_+ | intronic |
| ADediting_767873 | chr19_47352595_+ | intronic |
| ADediting_767874 | chr19_47352600_+ | intronic |
| ADediting_767875 | chr19_47352657_+ | intronic |
| ADediting_767876 | chr19_47354790_+ | intronic |
| ADediting_767877 | chr19_47355731_+ | intronic |
| ADediting_767878 | chr19_47356712_+ | intronic |
| ADediting_767879 | chr19_47356734_+ | intronic |
| ADediting_767880 | chr19_47357516_+ | intronic |
| ADediting_767881 | chr19_47359769_+ | intronic |
| ADediting_767882 | chr19_47360772_+ | intronic |
| ADediting_767883 | chr19_47360797_+ | intronic |
| ADediting_767884 | chr19_47360798_+ | intronic |
| ADediting_767885 | chr19_47360813_+ | intronic |
| ADediting_767886 | chr19_47361224_+ | intronic |
| ADediting_767887 | chr19_47361225_+ | intronic |
| ADediting_767888 | chr19_47361244_+ | intronic |
| ADediting_767889 | chr19_47361262_+ | intronic |
| ADediting_767890 | chr19_47361297_+ | intronic |
| ADediting_767891 | chr19_47361298_+ | intronic |
| ADediting_767892 | chr19_47361299_+ | intronic |
| ADediting_767893 | chr19_47361315_+ | intronic |
| ADediting_767894 | chr19_47361324_+ | intronic |
| ADediting_767895 | chr19_47361337_+ | intronic |
| ADediting_767896 | chr19_47361351_+ | intronic |
| ADediting_767897 | chr19_47361672_+ | intronic |
| ADediting_767898 | chr19_47362146_+ | intronic |
| ADediting_767899 | chr19_47363044_+ | intronic |
| ADediting_767900 | chr19_47363050_+ | intronic |
| ADediting_767901 | chr19_47363051_+ | intronic |
| ADediting_767902 | chr19_47363068_+ | intronic |
| ADediting_767903 | chr19_47363077_+ | intronic |
| ADediting_767904 | chr19_47363080_+ | intronic |
| ADediting_767905 | chr19_47363161_+ | intronic |
| ADediting_767906 | chr19_47363228_+ | intronic |
| ADediting_767907 | chr19_47363234_+ | intronic |
| ADediting_767908 | chr19_47363338_+ | intronic |
| ADediting_767909 | chr19_47363556_+ | intronic |
| ADediting_767910 | chr19_47363562_+ | intronic |
| ADediting_767911 | chr19_47363563_+ | intronic |
| ADediting_767912 | chr19_47363571_+ | intronic |
| ADediting_767913 | chr19_47363584_+ | intronic |
| ADediting_767914 | chr19_47363589_+ | intronic |
| ADediting_767915 | chr19_47363598_+ | intronic |
| ADediting_767916 | chr19_47363634_+ | intronic |
| ADediting_767917 | chr19_47363655_+ | intronic |
| ADediting_767918 | chr19_47363661_+ | intronic |
| ADediting_767919 | chr19_47363664_+ | intronic |
| ADediting_767920 | chr19_47363666_+ | intronic |
| ADediting_767921 | chr19_47363667_+ | intronic |
| ADediting_767922 | chr19_47363668_+ | intronic |
| ADediting_767923 | chr19_47363671_+ | intronic |
| ADediting_767924 | chr19_47363697_+ | intronic |
| ADediting_767925 | chr19_47363698_+ | intronic |
| ADediting_767926 | chr19_47363773_+ | intronic |
| ADediting_767927 | chr19_47363803_+ | intronic |
| ADediting_767928 | chr19_47364532_+ | intronic |
| ADediting_767929 | chr19_47364536_+ | intronic |
| ADediting_767930 | chr19_47364551_+ | intronic |
| ADediting_767931 | chr19_47364656_+ | intronic |
| ADediting_767932 | chr19_47364663_+ | intronic |
| ADediting_767933 | chr19_47365316_+ | intronic |
| ADediting_767934 | chr19_47365332_+ | intronic |
| ADediting_767935 | chr19_47365345_+ | intronic |
| ADediting_767936 | chr19_47365351_+ | intronic |
| ADediting_767937 | chr19_47365352_+ | intronic |
| ADediting_767938 | chr19_47365452_+ | intronic |
| ADediting_767939 | chr19_47365486_+ | intronic |
| ADediting_767940 | chr19_47365514_+ | intronic |
| ADediting_767941 | chr19_47366344_+ | intronic |
| ADediting_767942 | chr19_47366345_+ | intronic |
| ADediting_767943 | chr19_47366374_+ | intronic |
| ADediting_767944 | chr19_47366381_+ | intronic |
| ADediting_767945 | chr19_47366461_+ | intronic |
| ADediting_767946 | chr19_47366501_+ | intronic |
| ADediting_767947 | chr19_47366503_+ | intronic |
| ADediting_767948 | chr19_47366549_+ | intronic |
| ADediting_767949 | chr19_47366754_+ | intronic |
| ADediting_767950 | chr19_47368817_+ | intronic |
| ADediting_767951 | chr19_47368953_+ | intronic |
| ADediting_1556994 | chr19_47350313_+ | intronic |
| ADediting_1556995 | chr19_47350694_+ | intronic |
| ADediting_1556996 | chr19_47351393_+ | intronic |
| ADediting_1556997 | chr19_47352584_+ | intronic |
| ADediting_1556998 | chr19_47363312_+ | intronic |
| ADediting_1556999 | chr19_47363326_+ | intronic |
| ADediting_1557000 | chr19_47363330_+ | intronic |
| ADediting_1557001 | chr19_47363353_+ | intronic |
| ADediting_1557002 | chr19_47363356_+ | intronic |
| ADediting_1557003 | chr19_47368783_+ | intronic |
| ADediting_1557004 | chr19_47368843_+ | intronic |
Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_767841 | chr19_47350319_+ | SINE | Alu | Name=AluJb |
| ADediting_767842 | chr19_47350324_+ | SINE | Alu | Name=AluJb |
| ADediting_767843 | chr19_47350348_+ | SINE | Alu | Name=AluJb |
| ADediting_767844 | chr19_47350502_+ | SINE | Alu | Name=AluSp |
| ADediting_767845 | chr19_47350521_+ | SINE | Alu | Name=AluSp |
| ADediting_767846 | chr19_47350522_+ | SINE | Alu | Name=AluSp |
| ADediting_767847 | chr19_47350539_+ | SINE | Alu | Name=AluSp |
| ADediting_767848 | chr19_47350561_+ | SINE | Alu | Name=AluSp |
| ADediting_767849 | chr19_47350563_+ | SINE | Alu | Name=AluSp |
| ADediting_767850 | chr19_47350567_+ | SINE | Alu | Name=AluSp |
| ADediting_767851 | chr19_47350605_+ | SINE | Alu | Name=AluSp |
| ADediting_767852 | chr19_47350629_+ | SINE | Alu | Name=AluSp |
| ADediting_767853 | chr19_47350654_+ | SINE | Alu | Name=AluSp |
| ADediting_767854 | chr19_47350672_+ | SINE | Alu | Name=AluSp |
| ADediting_767855 | chr19_47350681_+ | SINE | Alu | Name=AluSp |
| ADediting_767856 | chr19_47350682_+ | SINE | Alu | Name=AluSp |
| ADediting_767857 | chr19_47351202_+ | SINE | Alu | Name=AluYh3 |
| ADediting_767858 | chr19_47351259_+ | SINE | Alu | Name=AluYh3 |
| ADediting_767859 | chr19_47351271_+ | SINE | Alu | Name=AluYh3 |
| ADediting_767860 | chr19_47352414_+ | SINE | Alu | Name=AluJo |
| ADediting_767861 | chr19_47352421_+ | SINE | Alu | Name=AluJo |
| ADediting_767862 | chr19_47352427_+ | SINE | Alu | Name=AluJo |
| ADediting_767863 | chr19_47352442_+ | SINE | Alu | Name=AluJo |
| ADediting_767864 | chr19_47352443_+ | SINE | Alu | Name=AluJo |
| ADediting_767865 | chr19_47352466_+ | SINE | Alu | Name=AluJo |
| ADediting_767866 | chr19_47352469_+ | SINE | Alu | Name=AluJo |
| ADediting_767867 | chr19_47352481_+ | SINE | Alu | Name=AluJo |
| ADediting_767868 | chr19_47352494_+ | SINE | Alu | Name=AluJo |
| ADediting_767869 | chr19_47352528_+ | SINE | Alu | Name=AluJo |
| ADediting_767870 | chr19_47352554_+ | SINE | Alu | Name=AluJo |
| ADediting_767871 | chr19_47352560_+ | SINE | Alu | Name=AluJo |
| ADediting_767872 | chr19_47352577_+ | SINE | Alu | Name=AluJo |
| ADediting_767873 | chr19_47352595_+ | SINE | Alu | Name=AluJo |
| ADediting_767874 | chr19_47352600_+ | SINE | Alu | Name=AluJo |
| ADediting_767875 | chr19_47352657_+ | SINE | Alu | Name=AluJo |
| ADediting_767876 | chr19_47354790_+ | SINE | Alu | Name=AluSp |
| ADediting_767877 | chr19_47355731_+ | SINE | Alu | Name=AluY |
| ADediting_767878 | chr19_47356712_+ | SINE | Alu | Name=AluSx |
| ADediting_767879 | chr19_47356734_+ | SINE | Alu | Name=AluSx |
| ADediting_767880 | chr19_47357516_+ | DNA | hAT-Charlie | Name=MER20 |
| ADediting_767881 | chr19_47359769_+ | SINE | Alu | Name=AluSx1 |
| ADediting_767882 | chr19_47360772_+ | SINE | Alu | Name=AluSz |
| ADediting_767883 | chr19_47360797_+ | SINE | Alu | Name=AluSz |
| ADediting_767884 | chr19_47360798_+ | SINE | Alu | Name=AluSz |
| ADediting_767885 | chr19_47360813_+ | SINE | Alu | Name=AluSz |
| ADediting_767886 | chr19_47361224_+ | SINE | Alu | Name=AluJb |
| ADediting_767887 | chr19_47361225_+ | SINE | Alu | Name=AluJb |
| ADediting_767888 | chr19_47361244_+ | SINE | Alu | Name=AluJb |
| ADediting_767889 | chr19_47361262_+ | SINE | Alu | Name=AluJb |
| ADediting_767890 | chr19_47361297_+ | SINE | Alu | Name=AluJb |
| ADediting_767891 | chr19_47361298_+ | SINE | Alu | Name=AluJb |
| ADediting_767892 | chr19_47361299_+ | SINE | Alu | Name=AluJb |
| ADediting_767893 | chr19_47361315_+ | SINE | Alu | Name=AluJb |
| ADediting_767894 | chr19_47361324_+ | SINE | Alu | Name=AluJb |
| ADediting_767895 | chr19_47361337_+ | SINE | Alu | Name=AluJb |
| ADediting_767896 | chr19_47361351_+ | SINE | Alu | Name=AluJb |
| ADediting_767897 | chr19_47361672_+ | SINE | Alu | Name=AluSq2 |
| ADediting_767898 | chr19_47362146_+ | SINE | Alu | Name=AluJb |
| ADediting_767899 | chr19_47363044_+ | SINE | Alu | Name=AluSc8 |
| ADediting_767900 | chr19_47363050_+ | SINE | Alu | Name=AluSc8 |
| ADediting_767901 | chr19_47363051_+ | SINE | Alu | Name=AluSc8 |
| ADediting_767902 | chr19_47363068_+ | SINE | Alu | Name=AluSc8 |
| ADediting_767903 | chr19_47363077_+ | SINE | Alu | Name=AluSc8 |
| ADediting_767904 | chr19_47363080_+ | SINE | Alu | Name=AluSc8 |
| ADediting_767905 | chr19_47363161_+ | SINE | Alu | Name=AluSc8 |
| ADediting_767906 | chr19_47363228_+ | SINE | Alu | Name=AluSc8 |
| ADediting_767907 | chr19_47363234_+ | SINE | Alu | Name=AluSc8 |
| ADediting_767908 | chr19_47363338_+ | SINE | Alu | Name=AluJo |
| ADediting_767909 | chr19_47363556_+ | SINE | Alu | Name=AluSz |
| ADediting_767910 | chr19_47363562_+ | SINE | Alu | Name=AluSz |
| ADediting_767911 | chr19_47363563_+ | SINE | Alu | Name=AluSz |
| ADediting_767912 | chr19_47363571_+ | SINE | Alu | Name=AluSz |
| ADediting_767913 | chr19_47363584_+ | SINE | Alu | Name=AluSz |
| ADediting_767914 | chr19_47363589_+ | SINE | Alu | Name=AluSz |
| ADediting_767915 | chr19_47363598_+ | SINE | Alu | Name=AluSz |
| ADediting_767916 | chr19_47363634_+ | SINE | Alu | Name=AluSz |
| ADediting_767917 | chr19_47363655_+ | SINE | Alu | Name=AluSz |
| ADediting_767918 | chr19_47363661_+ | SINE | Alu | Name=AluSz |
| ADediting_767919 | chr19_47363664_+ | SINE | Alu | Name=AluSz |
| ADediting_767920 | chr19_47363666_+ | SINE | Alu | Name=AluSz |
| ADediting_767921 | chr19_47363667_+ | SINE | Alu | Name=AluSz |
| ADediting_767922 | chr19_47363668_+ | SINE | Alu | Name=AluSz |
| ADediting_767923 | chr19_47363671_+ | SINE | Alu | Name=AluSz |
| ADediting_767924 | chr19_47363697_+ | SINE | Alu | Name=AluSz |
| ADediting_767925 | chr19_47363698_+ | SINE | Alu | Name=AluSz |
| ADediting_767926 | chr19_47363773_+ | SINE | Alu | Name=AluSz |
| ADediting_767927 | chr19_47363803_+ | SINE | Alu | Name=AluSz |
| ADediting_767928 | chr19_47364532_+ | SINE | Alu | Name=AluJr |
| ADediting_767929 | chr19_47364536_+ | SINE | Alu | Name=AluJr |
| ADediting_767930 | chr19_47364551_+ | SINE | Alu | Name=AluJr |
| ADediting_767931 | chr19_47364656_+ | SINE | Alu | Name=AluJr |
| ADediting_767932 | chr19_47364663_+ | SINE | Alu | Name=AluJr |
| ADediting_767933 | chr19_47365316_+ | SINE | Alu | Name=AluSx |
| ADediting_767934 | chr19_47365332_+ | SINE | Alu | Name=AluSx |
| ADediting_767935 | chr19_47365345_+ | SINE | Alu | Name=AluSx |
| ADediting_767936 | chr19_47365351_+ | SINE | Alu | Name=AluSx |
| ADediting_767937 | chr19_47365352_+ | SINE | Alu | Name=AluSx |
| ADediting_767938 | chr19_47365452_+ | SINE | Alu | Name=AluSx |
| ADediting_767939 | chr19_47365486_+ | SINE | Alu | Name=AluSx |
| ADediting_767940 | chr19_47365514_+ | SINE | Alu | Name=AluSx |
| ADediting_767941 | chr19_47366344_+ | SINE | Alu | Name=AluSz |
| ADediting_767942 | chr19_47366345_+ | SINE | Alu | Name=AluSz |
| ADediting_767943 | chr19_47366374_+ | SINE | Alu | Name=AluSz |
| ADediting_767944 | chr19_47366381_+ | SINE | Alu | Name=AluSz |
| ADediting_767945 | chr19_47366461_+ | SINE | Alu | Name=AluSz |
| ADediting_767946 | chr19_47366501_+ | SINE | Alu | Name=AluSz |
| ADediting_767947 | chr19_47366503_+ | SINE | Alu | Name=AluSz |
| ADediting_767948 | chr19_47366549_+ | SINE | Alu | Name=AluSz |
| ADediting_767949 | chr19_47366754_+ | SINE | Alu | Name=AluSz |
| ADediting_767950 | chr19_47368817_+ | SINE | Alu | Name=AluSx1 |
| ADediting_767951 | chr19_47368953_+ | SINE | Alu | Name=AluSz |
| ADediting_1556994 | chr19_47350313_+ | SINE | Alu | Name=AluJb |
| ADediting_1556995 | chr19_47350694_+ | SINE | Alu | Name=AluSp |
| ADediting_1556996 | chr19_47351393_+ | SINE | Alu | Name=Alu |
| ADediting_1556997 | chr19_47352584_+ | SINE | Alu | Name=AluJo |
| ADediting_1556998 | chr19_47363312_+ | SINE | Alu | Name=AluJo |
| ADediting_1556999 | chr19_47363326_+ | SINE | Alu | Name=AluJo |
| ADediting_1557000 | chr19_47363330_+ | SINE | Alu | Name=AluJo |
| ADediting_1557001 | chr19_47363353_+ | SINE | Alu | Name=AluJo |
| ADediting_1557002 | chr19_47363356_+ | SINE | Alu | Name=AluJo |
| ADediting_1557003 | chr19_47368783_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1557004 | chr19_47368843_+ | SINE | Alu | Name=AluSx1 |
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RNA A-to-I editing events in the alternative splicing sites for DHX34 |
RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for DHX34 |
Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.* The grey color means N/A. |
Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for DHX34 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for DHX34 |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000134815.19 | ENST00000328771.9 | DHX34-201 | hsa-miR-5581-3p | chr19 | 47382245 | 47382251 | 7mer-m8 | 47382233 | 47382252 | 147 | -20.71 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000134815.19 | ENST00000328771.9 | DHX34-201 | hsa-miR-641 | chr19 | 47382426 | 47382432 | 7mer-m8 | 47382410 | 47382433 | 152 | -20.87 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for DHX34 |
- RNA A-to-I editing in mRNA.* Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for DHX34 |
Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_767845 | chr19_47350521_+ | 0.0312929674767391 | 0.122335251901929 | 0.83640495985613 | -0.0117752402337996 | 6.61289695754939e-13 | 0.393232361667963 |
| TCX | ADediting_767848 | chr19_47350561_+ | 0.883376119050929 | -0.012077849872333 | 0.0642505029996057 | -0.151481711446736 | 4.31459394778018e-05 | 0.327429525200634 |
| DLPFC | ADediting_767854 | chr19_47350672_+ | 0.0674842124027442 | 0.103986541317645 | 0.606368264641951 | -0.0293774122847432 | 3.259078971579e-18 | 0.467200962167734 |
| DLPFC | ADediting_767870 | chr19_47352554_+ | 0.241472461966984 | 0.0667215653722796 | 0.717236733282588 | -0.0206502099169495 | 1.72641371902665e-08 | 0.313348986512849 |
| CER | ADediting_767870 | chr19_47352554_+ | 0.0255129342894682 | 0.182361806691226 | 6.11545157097941e-05 | 0.321246778720699 | 0.00310536882003772 | 0.239917446438831 |
| DLPFC | ADediting_767873 | chr19_47352595_+ | 0.00815557724583443 | 0.15001254987456 | 0.153706223580796 | 0.0812174612480028 | 2.26592329590677e-09 | 0.331207037834987 |
| DLPFC | ADediting_767909 | chr19_47363556_+ | 0.360128193392015 | 0.0521506707217394 | 0.174696501607124 | -0.0772844348747633 | 7.00811630736648e-25 | 0.540183634598512 |
| DLPFC | ADediting_767910 | chr19_47363562_+ | 0.705288594725616 | 0.0215644312800775 | 0.159808578846144 | -0.0800344765999847 | 1.15325315717563e-16 | 0.447415540222889 |
| DLPFC | ADediting_767914 | chr19_47363589_+ | 0.469077898351031 | -0.0412685055796096 | 0.0207074615843882 | -0.131346172561485 | 8.30574320277168e-11 | 0.358034769672903 |
| DLPFC | ADediting_767924 | chr19_47363697_+ | 0.797247026711111 | -0.0146499968599317 | 0.022662612010936 | -0.129420734033707 | 1.52877188398242e-12 | 0.387424566516835 |
Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 9.68094656672958e-17 | 0.448417049181577 | 3.59174748339265e-29 | 0.579229207319924 | 5.33319577793795e-07 | 0.280179559213437 |
| AC | 2.00324368219588e-09 | 0.367783259095298 | 1.65110386506839e-06 | 0.297667630115392 | 1.8934653824476e-16 | 0.489220825620466 |
| PCC | 1.77143187883343e-08 | 0.393598035091644 | 5.96848127860492e-10 | 0.428952669583799 | 1.00035524681366e-05 | 0.313570185992005 |
| CER | 1.75987775562071e-06 | 0.378751079500201 | 1.16190759661064e-09 | 0.471183781283157 | 0.00546335559309491 | 0.225803821686009 |
| TCX | 0.0249672237099327 | 0.183033072440586 | 0.745253466498061 | 0.0267473352986324 | 1.30128947906614e-11 | 0.516688365391712 |
| FP | 2.35379059710988e-08 | 0.403436885734594 | 0.0381780974864426 | 0.155522259299275 | 2.20912247884708e-11 | 0.474525613254758 |
| IFG | 2.45986218528108e-05 | 0.73888909771766 | 1.03808035683078e-05 | 0.760172647300126 | 0.00378294775939839 | 0.557557851838133 |
| PG | 0.110602538467407 | -0.117373575907956 | 0.484158663566297 | -0.0516130638506618 | 4.53832496481463e-06 | 0.329004483008507 |
| STG | 0.00280309528439006 | 0.322163166652899 | 0.333743238624615 | 0.106762779339919 | 0.1583887987237 | 0.155290881391496 |
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Relation with AD stages for DHX34 |
Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 0.000361386635043365 | 0.337037114248715 |
| TCX | 0.00021714758731307 | 0.351816431060379 |
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RelatedDrugs for DHX34 |
Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DHX34 |
Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |