|
||||||
|
 | |
| |
| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
| |
| |
| The effects of the RNA editing to the stability of the RNA structures |
| |
| |
| |
|
Gene summary for ATP5MF |
 Gene summary |
| Gene information | Gene symbol | ATP5MF | Gene ID | 9551 |
| Gene name | ATP synthase membrane subunit f | |
| Synonyms | ATP5J2|ATP5JL | |
| Cytomap | 7q22.1 | |
| Type of gene | protein-coding | |
| Description | ATP synthase subunit f, mitochondrialATP synthase f chain, mitochondrialATP synthase, H+ transporting, mitochondrial F0 complex, subunit fATP synthase, H+ transporting, mitochondrial Fo complex subunit F2F1F0-type ATPase subunit fF1Fo-ATP synthase co | |
| Modification date | 20200313 | |
| UniProtAcc | P56134, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| ATP5MF | GO:0042776 | mitochondrial ATP synthesis coupled proton transport | 12110673 |
Top |
RNA A-to-I events for ATP5MF |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1376932(99459548, -), ADediting_1376933(99459626, -), ADediting_1376934(99461302, -), ADediting_1376935(99461312, -), ADediting_1376936(99461321, -), ADediting_1376937(99461325, -), ADediting_1376938(99461334, -), ADediting_1376939(99461348, -), ADediting_1376940(99461626, -), ADediting_1376941(99461627, -), ADediting_1376942(99461641, -), ADediting_1376943(99461721, -), ADediting_1376944(99461751, -), ADediting_1376945(99461782, -), ADediting_1376946(99461786, -), ADediting_1376947(99461790, -), ADediting_1376948(99461796, -), ADediting_1376949(99461804, -), ADediting_1376950(99461822, -), ADediting_1376951(99461851, -), ADediting_1376952(99461861, -), ADediting_1376953(99461862, -), ADediting_1376954(99461885, -), ADediting_1376955(99461900, -), ADediting_1376956(99461930, -), ADediting_1376957(99461931, -), ADediting_1376958(99462196, -), ADediting_1376959(99462218, -), ADediting_1376960(99462234, -), ADediting_1376961(99462259, -), ADediting_1376962(99462263, -), ADediting_1376963(99462285, -), ADediting_1376964(99462346, -), ADediting_1376965(99462352, -), ADediting_1376966(99462356, -), ADediting_1376967(99462368, -), ADediting_1376968(99462405, -), ADediting_1376969(99462416, -), ADediting_1376970(99462421, -), ADediting_1376971(99462520, -), ADediting_1376972(99462583, -), ADediting_1376973(99462595, -), ADediting_1376974(99462609, -), ADediting_1376975(99462612, -), ADediting_1376976(99462645, -), ADediting_1376977(99462653, -), ADediting_1376978(99462663, -), ADediting_1376979(99462666, -), ADediting_1376980(99462675, -), ADediting_1376981(99462692, -), ADediting_1376982(99462699, -), ADediting_1376983(99462712, -), ADediting_1376984(99462728, -), ADediting_1376985(99462731, -), ADediting_1376986(99462978, -), ADediting_1376987(99463573, -), ADediting_1376988(99463676, -), ADediting_1376989(99463693, -), ADediting_1376990(99463694, -), ADediting_1376991(99463700, -), ADediting_1376992(99463735, -), ADediting_1376993(99464611, -), ADediting_1376994(99465885, -), ADediting_1589240(99461374, -), ADediting_1589241(99461779, -), ADediting_1589242(99463521, -), ADediting_1589243(99463713, -), ADediting_1589244(99463737, -), ADediting_1589245(99464541, -), ADediting_1667626(99461876, -), |
Top |
RNA editing positional annotations for ATP5MF using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1376932 | chr7_99459548_- | intronic |
| ADediting_1376933 | chr7_99459626_- | intronic |
| ADediting_1376934 | chr7_99461302_- | intronic |
| ADediting_1376935 | chr7_99461312_- | intronic |
| ADediting_1376936 | chr7_99461321_- | intronic |
| ADediting_1376937 | chr7_99461325_- | intronic |
| ADediting_1376938 | chr7_99461334_- | intronic |
| ADediting_1376939 | chr7_99461348_- | intronic |
| ADediting_1376940 | chr7_99461626_- | intronic |
| ADediting_1376941 | chr7_99461627_- | intronic |
| ADediting_1376942 | chr7_99461641_- | intronic |
| ADediting_1376943 | chr7_99461721_- | intronic |
| ADediting_1376944 | chr7_99461751_- | intronic |
| ADediting_1376945 | chr7_99461782_- | intronic |
| ADediting_1376946 | chr7_99461786_- | intronic |
| ADediting_1376947 | chr7_99461790_- | intronic |
| ADediting_1376948 | chr7_99461796_- | intronic |
| ADediting_1376949 | chr7_99461804_- | intronic |
| ADediting_1376950 | chr7_99461822_- | intronic |
| ADediting_1376951 | chr7_99461851_- | intronic |
| ADediting_1376952 | chr7_99461861_- | intronic |
| ADediting_1376953 | chr7_99461862_- | intronic |
| ADediting_1376954 | chr7_99461885_- | intronic |
| ADediting_1376955 | chr7_99461900_- | intronic |
| ADediting_1376956 | chr7_99461930_- | intronic |
| ADediting_1376957 | chr7_99461931_- | intronic |
| ADediting_1376958 | chr7_99462196_- | intronic |
| ADediting_1376959 | chr7_99462218_- | intronic |
| ADediting_1376960 | chr7_99462234_- | intronic |
| ADediting_1376961 | chr7_99462259_- | intronic |
| ADediting_1376962 | chr7_99462263_- | intronic |
| ADediting_1376963 | chr7_99462285_- | intronic |
| ADediting_1376964 | chr7_99462346_- | intronic |
| ADediting_1376965 | chr7_99462352_- | intronic |
| ADediting_1376966 | chr7_99462356_- | intronic |
| ADediting_1376967 | chr7_99462368_- | intronic |
| ADediting_1376968 | chr7_99462405_- | intronic |
| ADediting_1376969 | chr7_99462416_- | intronic |
| ADediting_1376970 | chr7_99462421_- | intronic |
| ADediting_1376971 | chr7_99462520_- | intronic |
| ADediting_1376972 | chr7_99462583_- | intronic |
| ADediting_1376973 | chr7_99462595_- | intronic |
| ADediting_1376974 | chr7_99462609_- | intronic |
| ADediting_1376975 | chr7_99462612_- | intronic |
| ADediting_1376976 | chr7_99462645_- | intronic |
| ADediting_1376977 | chr7_99462653_- | intronic |
| ADediting_1376978 | chr7_99462663_- | intronic |
| ADediting_1376979 | chr7_99462666_- | intronic |
| ADediting_1376980 | chr7_99462675_- | intronic |
| ADediting_1376981 | chr7_99462692_- | intronic |
| ADediting_1376982 | chr7_99462699_- | intronic |
| ADediting_1376983 | chr7_99462712_- | intronic |
| ADediting_1376984 | chr7_99462728_- | intronic |
| ADediting_1376985 | chr7_99462731_- | intronic |
| ADediting_1376986 | chr7_99462978_- | intronic |
| ADediting_1376987 | chr7_99463573_- | intronic |
| ADediting_1376988 | chr7_99463676_- | intronic |
| ADediting_1376989 | chr7_99463693_- | intronic |
| ADediting_1376990 | chr7_99463694_- | intronic |
| ADediting_1376991 | chr7_99463700_- | intronic |
| ADediting_1376992 | chr7_99463735_- | intronic |
| ADediting_1376993 | chr7_99464611_- | intronic |
| ADediting_1376994 | chr7_99465885_- | intronic |
| ADediting_1589240 | chr7_99461374_- | intronic |
| ADediting_1589241 | chr7_99461779_- | intronic |
| ADediting_1589242 | chr7_99463521_- | intronic |
| ADediting_1589243 | chr7_99463713_- | intronic |
| ADediting_1589244 | chr7_99463737_- | intronic |
| ADediting_1589245 | chr7_99464541_- | intronic |
| ADediting_1667626 | chr7_99461876_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1376932 | chr7_99459548_- | SINE | Alu | Name=AluJo |
| ADediting_1376933 | chr7_99459626_- | SINE | Alu | Name=AluJo |
| ADediting_1376934 | chr7_99461302_- | SINE | Alu | Name=FAM |
| ADediting_1376935 | chr7_99461312_- | SINE | Alu | Name=FAM |
| ADediting_1376936 | chr7_99461321_- | SINE | Alu | Name=FAM |
| ADediting_1376937 | chr7_99461325_- | SINE | Alu | Name=FAM |
| ADediting_1376938 | chr7_99461334_- | SINE | Alu | Name=FAM |
| ADediting_1376939 | chr7_99461348_- | SINE | Alu | Name=FAM |
| ADediting_1376940 | chr7_99461626_- | SINE | Alu | Name=AluSz |
| ADediting_1376941 | chr7_99461627_- | SINE | Alu | Name=AluSz |
| ADediting_1376942 | chr7_99461641_- | SINE | Alu | Name=AluSz |
| ADediting_1376943 | chr7_99461721_- | SINE | Alu | Name=AluSx |
| ADediting_1376944 | chr7_99461751_- | SINE | Alu | Name=AluSx |
| ADediting_1376945 | chr7_99461782_- | SINE | Alu | Name=AluSx |
| ADediting_1376946 | chr7_99461786_- | SINE | Alu | Name=AluSx |
| ADediting_1376947 | chr7_99461790_- | SINE | Alu | Name=AluSx |
| ADediting_1376948 | chr7_99461796_- | SINE | Alu | Name=AluSx |
| ADediting_1376949 | chr7_99461804_- | SINE | Alu | Name=AluSx |
| ADediting_1376950 | chr7_99461822_- | SINE | Alu | Name=AluSx |
| ADediting_1376951 | chr7_99461851_- | SINE | Alu | Name=AluSx |
| ADediting_1376952 | chr7_99461861_- | SINE | Alu | Name=AluSx |
| ADediting_1376953 | chr7_99461862_- | SINE | Alu | Name=AluSx |
| ADediting_1376954 | chr7_99461885_- | SINE | Alu | Name=AluSx |
| ADediting_1376955 | chr7_99461900_- | SINE | Alu | Name=AluSx |
| ADediting_1376956 | chr7_99461930_- | SINE | Alu | Name=AluSx |
| ADediting_1376957 | chr7_99461931_- | SINE | Alu | Name=AluSx |
| ADediting_1376958 | chr7_99462196_- | SINE | Alu | Name=AluY |
| ADediting_1376959 | chr7_99462218_- | SINE | Alu | Name=AluY |
| ADediting_1376960 | chr7_99462234_- | SINE | Alu | Name=AluY |
| ADediting_1376961 | chr7_99462259_- | SINE | Alu | Name=AluY |
| ADediting_1376962 | chr7_99462263_- | SINE | Alu | Name=AluY |
| ADediting_1376963 | chr7_99462285_- | SINE | Alu | Name=AluY |
| ADediting_1376964 | chr7_99462346_- | SINE | Alu | Name=AluY |
| ADediting_1376965 | chr7_99462352_- | SINE | Alu | Name=AluY |
| ADediting_1376966 | chr7_99462356_- | SINE | Alu | Name=AluY |
| ADediting_1376967 | chr7_99462368_- | SINE | Alu | Name=AluY |
| ADediting_1376968 | chr7_99462405_- | SINE | Alu | Name=AluY |
| ADediting_1376969 | chr7_99462416_- | SINE | Alu | Name=AluY |
| ADediting_1376970 | chr7_99462421_- | SINE | Alu | Name=AluY |
| ADediting_1376971 | chr7_99462520_- | SINE | Alu | Name=AluSg |
| ADediting_1376972 | chr7_99462583_- | SINE | Alu | Name=AluSg |
| ADediting_1376973 | chr7_99462595_- | SINE | Alu | Name=AluSg |
| ADediting_1376974 | chr7_99462609_- | SINE | Alu | Name=AluSg |
| ADediting_1376975 | chr7_99462612_- | SINE | Alu | Name=AluSg |
| ADediting_1376976 | chr7_99462645_- | SINE | Alu | Name=AluSg |
| ADediting_1376977 | chr7_99462653_- | SINE | Alu | Name=AluSg |
| ADediting_1376978 | chr7_99462663_- | SINE | Alu | Name=AluSg |
| ADediting_1376979 | chr7_99462666_- | SINE | Alu | Name=AluSg |
| ADediting_1376980 | chr7_99462675_- | SINE | Alu | Name=AluSg |
| ADediting_1376981 | chr7_99462692_- | SINE | Alu | Name=AluSg |
| ADediting_1376982 | chr7_99462699_- | SINE | Alu | Name=AluSg |
| ADediting_1376983 | chr7_99462712_- | SINE | Alu | Name=AluSg |
| ADediting_1376984 | chr7_99462728_- | SINE | Alu | Name=AluSg |
| ADediting_1376985 | chr7_99462731_- | SINE | Alu | Name=AluSg |
| ADediting_1376986 | chr7_99462978_- | SINE | MIR | Name=MIRb |
| ADediting_1376987 | chr7_99463573_- | SINE | Alu | Name=AluSq2 |
| ADediting_1376988 | chr7_99463676_- | SINE | Alu | Name=AluSq2 |
| ADediting_1376989 | chr7_99463693_- | SINE | Alu | Name=AluSq2 |
| ADediting_1376990 | chr7_99463694_- | SINE | Alu | Name=AluSq2 |
| ADediting_1376991 | chr7_99463700_- | SINE | Alu | Name=AluSq2 |
| ADediting_1376992 | chr7_99463735_- | SINE | Alu | Name=AluSq2 |
| ADediting_1376993 | chr7_99464611_- | SINE | Alu | Name=AluYf1 |
| ADediting_1589241 | chr7_99461779_- | SINE | Alu | Name=AluSx |
| ADediting_1589242 | chr7_99463521_- | SINE | Alu | Name=AluSq2 |
| ADediting_1589243 | chr7_99463713_- | SINE | Alu | Name=AluSq2 |
| ADediting_1589244 | chr7_99463737_- | SINE | Alu | Name=AluSq2 |
| ADediting_1589245 | chr7_99464541_- | SINE | Alu | Name=AluYf1 |
| ADediting_1667626 | chr7_99461876_- | SINE | Alu | Name=AluSx |
Top |
RNA A-to-I editing events in the alternative splicing sites for ATP5MF |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATP5MF |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for ATP5MF |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for ATP5MF |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for ATP5MF |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for ATP5MF |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1376933 | chr7_99459626_- | 0.0477138395940376 | 0.161944833123409 | 5.02743549385964e-05 | 0.324735690957896 | 0.0406193234666461 | 0.167388031463168 |
| CER | ADediting_1376934 | chr7_99461302_- | 0.000424964549527259 | 0.284161654293748 | 2.78366921022094e-06 | 0.371918754157223 | 0.149493318050545 | 0.118259484143332 |
| CER | ADediting_1376936 | chr7_99461321_- | 0.000373746437980077 | 0.286778893933498 | 1.85345446999587e-08 | 0.43938966745876 | 0.199332719879381 | 0.105383181414694 |
| CER | ADediting_1376938 | chr7_99461334_- | 3.39389604632157e-05 | 0.331607852543516 | 2.76920008884068e-07 | 0.404840721115612 | 0.0234044174508894 | 0.185027572845696 |
| CER | ADediting_1376939 | chr7_99461348_- | 0.00124975254915511 | 0.261103729299512 | 0.000141309155750176 | 0.305826941039095 | 0.0213356830063516 | 0.187851737301204 |
| CER | ADediting_1376940 | chr7_99461626_- | 8.6463033219313e-05 | 0.314972709682156 | 4.59531244924188e-05 | 0.326322097865009 | 0.0320323664320653 | 0.175166930968223 |
| CER | ADediting_1376942 | chr7_99461641_- | 0.000125939658779203 | 0.307997650561462 | 0.000412137935435344 | 0.284788526634853 | 0.0522980525272561 | 0.158776788797445 |
| CER | ADediting_1376943 | chr7_99461721_- | 0.00933141310469389 | 0.211622630691432 | 1.00770756170538e-06 | 0.386855865880365 | 0.0273942019107274 | 0.180138180356356 |
| DLPFC | ADediting_1376945 | chr7_99461782_- | 0.00758937312190196 | 0.15137190223835 | 0.586801581002941 | 0.0309851661271831 | 1.38849592282349e-15 | 0.4328077076225 |
| DLPFC | ADediting_1376947 | chr7_99461790_- | 0.0123301091950269 | 0.141988229565641 | 0.309119751534983 | 0.057951288790827 | 1.37619580233207e-10 | 0.354098103933919 |
| DLPFC | ADediting_1376949 | chr7_99461804_- | 0.00040086065836274 | 0.199807339562914 | 0.244892801631798 | 0.0662401354713398 | 2.34830061495522e-17 | 0.45640383764025 |
| DLPFC | ADediting_1376952 | chr7_99461861_- | 0.0311564357106127 | 0.122433458023023 | 0.902069463007799 | -0.00701689041793407 | 5.5323178050484e-21 | 0.49967505417385 |
| CER | ADediting_1376956 | chr7_99461930_- | 7.41592030621063e-05 | 0.317770812694072 | 4.09995251107355e-05 | 0.328322907102229 | 0.639874255252616 | -0.0385097786805228 |
| CER | ADediting_1376957 | chr7_99461931_- | 0.000498182651531721 | 0.280886662000314 | 9.62649000318428e-05 | 0.312998631122317 | 0.423083268666584 | 0.0658882688425954 |
| CER | ADediting_1376958 | chr7_99462196_- | 0.00611600279913336 | 0.222883837224051 | 2.41974099930071e-05 | 0.337396409233888 | 0.806238395298355 | 0.0201940491755118 |
| DLPFC | ADediting_1376959 | chr7_99462218_- | 0.000266729084338839 | 0.205671273827045 | 0.106461801394044 | 0.0918633710301768 | 1.09397650231314e-12 | 0.389757469591416 |
| CER | ADediting_1376959 | chr7_99462218_- | 0.0096664969645309 | 0.210657426491254 | 1.66715335956499e-05 | 0.343639841650921 | 0.465369518584513 | 0.0600555730346129 |
| DLPFC | ADediting_1376971 | chr7_99462520_- | 0.00907606755303798 | 0.147972329699383 | 0.360599155015101 | 0.0520996311457922 | 1.05053484910714e-13 | 0.405596997378226 |
| CER | ADediting_1376972 | chr7_99462583_- | 0.0129316378544151 | 0.202538494178387 | 7.06448781580607e-05 | 0.318650053855148 | 0.31561135897649 | 0.0824871527230895 |
| DLPFC | ADediting_1376978 | chr7_99462663_- | 0.0189717701193129 | 0.133192537203792 | 0.952819338198785 | -0.00337406320081373 | 2.05376275028253e-26 | 0.554734254234277 |
| DLPFC | ADediting_1376980 | chr7_99462675_- | 0.0407741948357265 | 0.116270039590441 | 0.214635866618543 | 0.0706767834776919 | 1.7616527898514e-10 | 0.352153119093208 |
| DLPFC | ADediting_1376984 | chr7_99462728_- | 0.000528902088505521 | 0.195720720791927 | 0.0680196790298164 | 0.103785223738641 | 8.31372377061767e-20 | 0.486298505012827 |
| CER | ADediting_1376984 | chr7_99462728_- | 0.000554057362007811 | 0.278674118997492 | 1.87192487212652e-07 | 0.410090300658255 | 0.522516355908465 | 0.0526165925076417 |
| CER | ADediting_1376989 | chr7_99463693_- | 0.0001492752453992 | 0.304787123763235 | 2.36641473695395e-08 | 0.436422050542479 | 0.297804986519846 | 0.0855695054432472 |
| CER | ADediting_1376990 | chr7_99463694_- | 0.112441137920184 | 0.130140675545505 | 0.00012342551032084 | 0.30837606759212 | 0.00710059333123253 | 0.218965866259862 |
| CER | ADediting_1376991 | chr7_99463700_- | 8.01942068226431e-05 | 0.316348134490542 | 7.10548219177042e-09 | 0.450768233564429 | 0.0567541246068669 | 0.155910505574842 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 8.88702604968196e-36 | 0.630619410960194 | 9.57022252341387e-50 | 0.714712153444851 | 0.36489773780904 | -0.0516356899258103 |
| AC | 4.52459216521346e-60 | 0.812564381182045 | 2.41202939307624e-41 | 0.720717161466927 | 7.26852799152711e-17 | 0.495093249070529 |
| PCC | 4.68581383683582e-26 | 0.66809903578786 | 9.26249776427945e-28 | 0.684645168949133 | 0.114537192396699 | 0.114564766946726 |
| CER | 0.000109101641341476 | 0.310679944275785 | 0.00500157131325905 | 0.22806455901708 | 0.594171833767675 | 0.0438488443326454 |
| TCX | 5.37779817684702e-14 | 0.564439540643754 | 4.00253849780976e-21 | 0.672968981227795 | 0.000765968702736362 | -0.271817802797209 |
| FP | 2.88816617161523e-05 | 0.30797872468547 | 5.61770825238388e-09 | 0.419450438423805 | 0.00387380847924819 | -0.215453683695103 |
| IFG | 0.105163098727141 | 0.331794806107081 | 0.199327230934426 | 0.265652691758437 | 0.0374724719160932 | -0.41823515504794 |
| PG | 9.53095171204871e-22 | 0.627406635780317 | 7.03420615205242e-14 | 0.51305568909028 | 0.0181512691812288 | -0.173085501392858 |
| STG | 1.15821822899854e-11 | 0.656882004030856 | 5.6269716413328e-09 | 0.583699994912807 | 0.194396031286015 | -0.143002694664981 |
Top |
Relation with AD stages for ATP5MF |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1376991 | chr7_99463700_- | 0.00143821970170438 | 0.302942076554441 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| PG | 1.2950683858826e-06 | -0.346218632924067 |
Top |
RelatedDrugs for ATP5MF |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for ATP5MF |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
|