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![]() | Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for SFXN1 |
Gene summary |
| Gene information | Gene symbol | SFXN1 | Gene ID | 94081 |
| Gene name | sideroflexin 1 | |
| Synonyms | SLC56A1|TCC | |
| Cytomap | 5q35.2 | |
| Type of gene | protein-coding | |
| Description | sideroflexin-1tricarboxylate carrier protein | |
| Modification date | 20200313 | |
| UniProtAcc | Q9H9B4, | |
| Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| SFXN1 | GO:0006730 | one-carbon metabolic process | 30442778 |
| SFXN1 | GO:0015825 | L-serine transport | 30442778 |
| SFXN1 | GO:0042942 | D-serine transport | 30442778 |
Top |
RNA A-to-I events for SFXN1 |
RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA editing frequencies across three data sets. |
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The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA A-to-I editing events in AD. |
| ADediting_1188850(175487309, +), ADediting_1188851(175493029, +), ADediting_1188852(175495582, +), ADediting_1188853(175495606, +), ADediting_1188854(175495686, +), ADediting_1188855(175495964, +), ADediting_1188856(175495994, +), ADediting_1188857(175496001, +), ADediting_1188858(175496005, +), ADediting_1188859(175496078, +), ADediting_1188860(175496118, +), ADediting_1188861(175496120, +), ADediting_1188862(175496133, +), ADediting_1188863(175496159, +), ADediting_1188864(175496174, +), ADediting_1188865(175496254, +), ADediting_1188866(175496280, +), ADediting_1188867(175496289, +), ADediting_1188868(175496940, +), ADediting_1188869(175496969, +), ADediting_1188870(175496989, +), ADediting_1188871(175496992, +), ADediting_1188872(175496993, +), ADediting_1188873(175497007, +), ADediting_1188874(175497015, +), ADediting_1188875(175497019, +), ADediting_1188876(175497029, +), ADediting_1188877(175497035, +), ADediting_1188878(175497070, +), ADediting_1188879(175497073, +), ADediting_1188880(175497074, +), ADediting_1188881(175497086, +), ADediting_1188882(175497098, +), ADediting_1188883(175497111, +), ADediting_1188884(175497124, +), ADediting_1188885(175497141, +), ADediting_1188886(175497151, +), ADediting_1188887(175497667, +), ADediting_1188888(175497719, +), ADediting_1188889(175497783, +), ADediting_1188890(175497803, +), ADediting_1188891(175497809, +), ADediting_1188892(175497815, +), ADediting_1188893(175497851, +), ADediting_1188894(175497855, +), ADediting_1188895(175498983, +), ADediting_1188896(175498999, +), ADediting_1188897(175499000, +), ADediting_1188898(175499031, +), ADediting_1188899(175499076, +), ADediting_1188900(175499108, +), ADediting_1188901(175499176, +), ADediting_1188902(175499180, +), ADediting_1188903(175501108, +), ADediting_1188904(175501162, +), ADediting_1188905(175501186, +), ADediting_1188906(175501202, +), ADediting_1188907(175501251, +), ADediting_1188908(175501259, +), ADediting_1188909(175501275, +), ADediting_1188910(175501345, +), ADediting_1188911(175503739, +), ADediting_1188912(175503754, +), ADediting_1188913(175503786, +), ADediting_1188914(175503797, +), ADediting_1188915(175503893, +), ADediting_1188916(175503948, +), ADediting_1188917(175504320, +), ADediting_1188918(175504388, +), ADediting_1188919(175504389, +), ADediting_1188920(175504398, +), ADediting_1188921(175504399, +), ADediting_1188922(175504417, +), ADediting_1188923(175504419, +), ADediting_1188924(175504422, +), ADediting_1188925(175504424, +), ADediting_1188926(175504428, +), ADediting_1188927(175504469, +), ADediting_1188928(175504487, +), ADediting_1188929(175504904, +), ADediting_1188930(175504935, +), ADediting_1188931(175505280, +), ADediting_1188932(175505288, +), ADediting_1188933(175505334, +), ADediting_1188934(175505348, +), ADediting_1188935(175505349, +), ADediting_1188936(175505359, +), ADediting_1188937(175505416, +), ADediting_1188938(175505881, +), ADediting_1188939(175505946, +), ADediting_1188940(175505989, +), ADediting_1188941(175506001, +), ADediting_1188942(175506038, +), ADediting_1188943(175506722, +), ADediting_1188944(175506725, +), ADediting_1188945(175506846, +), ADediting_1188946(175506866, +), ADediting_1188947(175507850, +), ADediting_1188948(175507852, +), ADediting_1188949(175508351, +), ADediting_1188950(175508681, +), ADediting_1188951(175508731, +), ADediting_1188952(175508741, +), ADediting_1188953(175508755, +), ADediting_1188954(175508779, +), ADediting_1188955(175508878, +), ADediting_1188956(175508897, +), ADediting_1188957(175508909, +), ADediting_1188958(175508917, +), ADediting_1188959(175513039, +), ADediting_1188960(175513124, +), ADediting_1188961(175513125, +), ADediting_1188962(175513136, +), ADediting_1188963(175513179, +), ADediting_1188964(175513180, +), ADediting_1188965(175515129, +), ADediting_1188966(175515134, +), ADediting_1188967(175527959, +), ADediting_1188968(175527975, +), ADediting_1188969(175527999, +), ADediting_1188970(175528000, +), ADediting_1188971(175528019, +), ADediting_1188972(175528037, +), ADediting_1188973(175528050, +), ADediting_1188974(175528060, +), ADediting_1188975(175528062, +), ADediting_1188976(175528086, +), ADediting_1188977(175528087, +), ADediting_1188978(175528097, +), ADediting_1188979(175528103, +), ADediting_1188980(175528169, +), ADediting_1188981(175528170, +), ADediting_1188982(175528183, +), ADediting_1188983(175528185, +), ADediting_1188984(175528186, +), ADediting_1188985(175529081, +), ADediting_1188986(175529082, +), ADediting_1188987(175529087, +), ADediting_1188988(175529090, +), ADediting_1188989(175529098, +), ADediting_1188990(175529127, +), ADediting_1188991(175529160, +), ADediting_1188992(175529161, +), ADediting_1188993(175529172, +), ADediting_1188994(175529175, +), ADediting_1188995(175529176, +), ADediting_1188996(175529177, +), ADediting_1188997(175529178, +), ADediting_1188998(175529179, +), ADediting_1188999(175529181, +), ADediting_1189000(175529183, +), ADediting_1189001(175529184, +), ADediting_1189002(175529185, +), ADediting_1189003(175529187, +), ADediting_1189004(175529188, +), ADediting_1189005(175529191, +), ADediting_1189006(175529195, +), ADediting_1189007(175529199, +), ADediting_1189008(175529215, +), ADediting_1189009(175529217, +), ADediting_1189010(175529218, +), ADediting_1189011(175529223, +), ADediting_1189012(175529227, +), ADediting_1189013(175529240, +), ADediting_1189014(175529244, +), ADediting_1189015(175529247, +), ADediting_1189016(175529250, +), ADediting_1189017(175529258, +), ADediting_1189018(175529259, +), ADediting_1189019(175529266, +), ADediting_1189020(175529279, +), ADediting_1189021(175529283, +), ADediting_1189022(175529287, +), ADediting_1189023(175529288, +), ADediting_1189024(175529295, +), ADediting_1189025(175529303, +), ADediting_1189026(175529323, +), ADediting_1189027(175529327, +), ADediting_1189028(175529328, +), ADediting_1189029(175529329, +), ADediting_1189030(175529334, +), ADediting_1580766(175513029, +), ADediting_1580767(175513142, +), ADediting_1580768(175515038, +), ADediting_1580769(175515203, +), ADediting_1580770(175524029, +), ADediting_1580771(175525640, +), ADediting_1580772(175525665, +), ADediting_1580773(175525678, +), ADediting_1656111(175495609, +), |
Top |
RNA editing positional annotations for SFXN1 using Annovar |
Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1188850 | chr5_175487309_+ | intronic |
| ADediting_1188851 | chr5_175493029_+ | intronic |
| ADediting_1188852 | chr5_175495582_+ | intronic |
| ADediting_1188853 | chr5_175495606_+ | intronic |
| ADediting_1188854 | chr5_175495686_+ | intronic |
| ADediting_1188855 | chr5_175495964_+ | intronic |
| ADediting_1188856 | chr5_175495994_+ | intronic |
| ADediting_1188857 | chr5_175496001_+ | intronic |
| ADediting_1188858 | chr5_175496005_+ | intronic |
| ADediting_1188859 | chr5_175496078_+ | intronic |
| ADediting_1188860 | chr5_175496118_+ | intronic |
| ADediting_1188861 | chr5_175496120_+ | intronic |
| ADediting_1188862 | chr5_175496133_+ | intronic |
| ADediting_1188863 | chr5_175496159_+ | intronic |
| ADediting_1188864 | chr5_175496174_+ | intronic |
| ADediting_1188865 | chr5_175496254_+ | intronic |
| ADediting_1188866 | chr5_175496280_+ | intronic |
| ADediting_1188867 | chr5_175496289_+ | intronic |
| ADediting_1188868 | chr5_175496940_+ | intronic |
| ADediting_1188869 | chr5_175496969_+ | intronic |
| ADediting_1188870 | chr5_175496989_+ | intronic |
| ADediting_1188871 | chr5_175496992_+ | intronic |
| ADediting_1188872 | chr5_175496993_+ | intronic |
| ADediting_1188873 | chr5_175497007_+ | intronic |
| ADediting_1188874 | chr5_175497015_+ | intronic |
| ADediting_1188875 | chr5_175497019_+ | intronic |
| ADediting_1188876 | chr5_175497029_+ | intronic |
| ADediting_1188877 | chr5_175497035_+ | intronic |
| ADediting_1188878 | chr5_175497070_+ | intronic |
| ADediting_1188879 | chr5_175497073_+ | intronic |
| ADediting_1188880 | chr5_175497074_+ | intronic |
| ADediting_1188881 | chr5_175497086_+ | intronic |
| ADediting_1188882 | chr5_175497098_+ | intronic |
| ADediting_1188883 | chr5_175497111_+ | intronic |
| ADediting_1188884 | chr5_175497124_+ | intronic |
| ADediting_1188885 | chr5_175497141_+ | intronic |
| ADediting_1188886 | chr5_175497151_+ | intronic |
| ADediting_1188887 | chr5_175497667_+ | intronic |
| ADediting_1188888 | chr5_175497719_+ | intronic |
| ADediting_1188889 | chr5_175497783_+ | intronic |
| ADediting_1188890 | chr5_175497803_+ | intronic |
| ADediting_1188891 | chr5_175497809_+ | intronic |
| ADediting_1188892 | chr5_175497815_+ | intronic |
| ADediting_1188893 | chr5_175497851_+ | intronic |
| ADediting_1188894 | chr5_175497855_+ | intronic |
| ADediting_1188895 | chr5_175498983_+ | intronic |
| ADediting_1188896 | chr5_175498999_+ | intronic |
| ADediting_1188897 | chr5_175499000_+ | intronic |
| ADediting_1188898 | chr5_175499031_+ | intronic |
| ADediting_1188899 | chr5_175499076_+ | intronic |
| ADediting_1188900 | chr5_175499108_+ | intronic |
| ADediting_1188901 | chr5_175499176_+ | intronic |
| ADediting_1188902 | chr5_175499180_+ | intronic |
| ADediting_1188903 | chr5_175501108_+ | intronic |
| ADediting_1188904 | chr5_175501162_+ | intronic |
| ADediting_1188905 | chr5_175501186_+ | intronic |
| ADediting_1188906 | chr5_175501202_+ | intronic |
| ADediting_1188907 | chr5_175501251_+ | intronic |
| ADediting_1188908 | chr5_175501259_+ | intronic |
| ADediting_1188909 | chr5_175501275_+ | intronic |
| ADediting_1188910 | chr5_175501345_+ | intronic |
| ADediting_1188911 | chr5_175503739_+ | intronic |
| ADediting_1188912 | chr5_175503754_+ | intronic |
| ADediting_1188913 | chr5_175503786_+ | intronic |
| ADediting_1188914 | chr5_175503797_+ | intronic |
| ADediting_1188915 | chr5_175503893_+ | intronic |
| ADediting_1188916 | chr5_175503948_+ | intronic |
| ADediting_1188917 | chr5_175504320_+ | intronic |
| ADediting_1188918 | chr5_175504388_+ | intronic |
| ADediting_1188919 | chr5_175504389_+ | intronic |
| ADediting_1188920 | chr5_175504398_+ | intronic |
| ADediting_1188921 | chr5_175504399_+ | intronic |
| ADediting_1188922 | chr5_175504417_+ | intronic |
| ADediting_1188923 | chr5_175504419_+ | intronic |
| ADediting_1188924 | chr5_175504422_+ | intronic |
| ADediting_1188925 | chr5_175504424_+ | intronic |
| ADediting_1188926 | chr5_175504428_+ | intronic |
| ADediting_1188927 | chr5_175504469_+ | intronic |
| ADediting_1188928 | chr5_175504487_+ | intronic |
| ADediting_1188929 | chr5_175504904_+ | intronic |
| ADediting_1188930 | chr5_175504935_+ | intronic |
| ADediting_1188931 | chr5_175505280_+ | intronic |
| ADediting_1188932 | chr5_175505288_+ | intronic |
| ADediting_1188933 | chr5_175505334_+ | intronic |
| ADediting_1188934 | chr5_175505348_+ | intronic |
| ADediting_1188935 | chr5_175505349_+ | intronic |
| ADediting_1188936 | chr5_175505359_+ | intronic |
| ADediting_1188937 | chr5_175505416_+ | intronic |
| ADediting_1188938 | chr5_175505881_+ | intronic |
| ADediting_1188939 | chr5_175505946_+ | intronic |
| ADediting_1188940 | chr5_175505989_+ | intronic |
| ADediting_1188941 | chr5_175506001_+ | intronic |
| ADediting_1188942 | chr5_175506038_+ | intronic |
| ADediting_1188943 | chr5_175506722_+ | intronic |
| ADediting_1188944 | chr5_175506725_+ | intronic |
| ADediting_1188945 | chr5_175506846_+ | intronic |
| ADediting_1188946 | chr5_175506866_+ | intronic |
| ADediting_1188947 | chr5_175507850_+ | intronic |
| ADediting_1188948 | chr5_175507852_+ | intronic |
| ADediting_1188949 | chr5_175508351_+ | intronic |
| ADediting_1188950 | chr5_175508681_+ | intronic |
| ADediting_1188951 | chr5_175508731_+ | intronic |
| ADediting_1188952 | chr5_175508741_+ | intronic |
| ADediting_1188953 | chr5_175508755_+ | intronic |
| ADediting_1188954 | chr5_175508779_+ | intronic |
| ADediting_1188955 | chr5_175508878_+ | intronic |
| ADediting_1188956 | chr5_175508897_+ | intronic |
| ADediting_1188957 | chr5_175508909_+ | intronic |
| ADediting_1188958 | chr5_175508917_+ | intronic |
| ADediting_1188959 | chr5_175513039_+ | intronic |
| ADediting_1188960 | chr5_175513124_+ | intronic |
| ADediting_1188961 | chr5_175513125_+ | intronic |
| ADediting_1188962 | chr5_175513136_+ | intronic |
| ADediting_1188963 | chr5_175513179_+ | intronic |
| ADediting_1188964 | chr5_175513180_+ | intronic |
| ADediting_1188965 | chr5_175515129_+ | intronic |
| ADediting_1188966 | chr5_175515134_+ | intronic |
| ADediting_1188967 | chr5_175527959_+ | UTR3 |
| ADediting_1188968 | chr5_175527975_+ | UTR3 |
| ADediting_1188969 | chr5_175527999_+ | UTR3 |
| ADediting_1188970 | chr5_175528000_+ | UTR3 |
| ADediting_1188971 | chr5_175528019_+ | UTR3 |
| ADediting_1188972 | chr5_175528037_+ | UTR3 |
| ADediting_1188973 | chr5_175528050_+ | UTR3 |
| ADediting_1188974 | chr5_175528060_+ | UTR3 |
| ADediting_1188975 | chr5_175528062_+ | UTR3 |
| ADediting_1188976 | chr5_175528086_+ | UTR3 |
| ADediting_1188977 | chr5_175528087_+ | UTR3 |
| ADediting_1188978 | chr5_175528097_+ | UTR3 |
| ADediting_1188979 | chr5_175528103_+ | UTR3 |
| ADediting_1188980 | chr5_175528169_+ | UTR3 |
| ADediting_1188981 | chr5_175528170_+ | UTR3 |
| ADediting_1188982 | chr5_175528183_+ | UTR3 |
| ADediting_1188983 | chr5_175528185_+ | UTR3 |
| ADediting_1188984 | chr5_175528186_+ | UTR3 |
| ADediting_1188985 | chr5_175529081_+ | UTR3 |
| ADediting_1188986 | chr5_175529082_+ | UTR3 |
| ADediting_1188987 | chr5_175529087_+ | UTR3 |
| ADediting_1188988 | chr5_175529090_+ | UTR3 |
| ADediting_1188989 | chr5_175529098_+ | UTR3 |
| ADediting_1188990 | chr5_175529127_+ | UTR3 |
| ADediting_1188991 | chr5_175529160_+ | UTR3 |
| ADediting_1188992 | chr5_175529161_+ | UTR3 |
| ADediting_1188993 | chr5_175529172_+ | UTR3 |
| ADediting_1188994 | chr5_175529175_+ | UTR3 |
| ADediting_1188995 | chr5_175529176_+ | UTR3 |
| ADediting_1188996 | chr5_175529177_+ | UTR3 |
| ADediting_1188997 | chr5_175529178_+ | UTR3 |
| ADediting_1188998 | chr5_175529179_+ | UTR3 |
| ADediting_1188999 | chr5_175529181_+ | UTR3 |
| ADediting_1189000 | chr5_175529183_+ | UTR3 |
| ADediting_1189001 | chr5_175529184_+ | UTR3 |
| ADediting_1189002 | chr5_175529185_+ | UTR3 |
| ADediting_1189003 | chr5_175529187_+ | UTR3 |
| ADediting_1189004 | chr5_175529188_+ | UTR3 |
| ADediting_1189005 | chr5_175529191_+ | UTR3 |
| ADediting_1189006 | chr5_175529195_+ | UTR3 |
| ADediting_1189007 | chr5_175529199_+ | UTR3 |
| ADediting_1189008 | chr5_175529215_+ | UTR3 |
| ADediting_1189009 | chr5_175529217_+ | UTR3 |
| ADediting_1189010 | chr5_175529218_+ | UTR3 |
| ADediting_1189011 | chr5_175529223_+ | UTR3 |
| ADediting_1189012 | chr5_175529227_+ | UTR3 |
| ADediting_1189013 | chr5_175529240_+ | UTR3 |
| ADediting_1189014 | chr5_175529244_+ | UTR3 |
| ADediting_1189015 | chr5_175529247_+ | UTR3 |
| ADediting_1189016 | chr5_175529250_+ | UTR3 |
| ADediting_1189017 | chr5_175529258_+ | UTR3 |
| ADediting_1189018 | chr5_175529259_+ | UTR3 |
| ADediting_1189019 | chr5_175529266_+ | UTR3 |
| ADediting_1189020 | chr5_175529279_+ | UTR3 |
| ADediting_1189021 | chr5_175529283_+ | UTR3 |
| ADediting_1189022 | chr5_175529287_+ | UTR3 |
| ADediting_1189023 | chr5_175529288_+ | UTR3 |
| ADediting_1189024 | chr5_175529295_+ | UTR3 |
| ADediting_1189025 | chr5_175529303_+ | UTR3 |
| ADediting_1189026 | chr5_175529323_+ | UTR3 |
| ADediting_1189027 | chr5_175529327_+ | UTR3 |
| ADediting_1189028 | chr5_175529328_+ | UTR3 |
| ADediting_1189029 | chr5_175529329_+ | UTR3 |
| ADediting_1189030 | chr5_175529334_+ | UTR3 |
| ADediting_1580766 | chr5_175513029_+ | intronic |
| ADediting_1580767 | chr5_175513142_+ | intronic |
| ADediting_1580768 | chr5_175515038_+ | intronic |
| ADediting_1580769 | chr5_175515203_+ | intronic |
| ADediting_1580770 | chr5_175524029_+ | UTR3 |
| ADediting_1580771 | chr5_175525640_+ | intronic |
| ADediting_1580772 | chr5_175525665_+ | intronic |
| ADediting_1580773 | chr5_175525678_+ | intronic |
| ADediting_1656111 | chr5_175495609_+ | intronic |
Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1188851 | chr5_175493029_+ | SINE | Alu | Name=AluY |
| ADediting_1188852 | chr5_175495582_+ | SINE | Alu | Name=AluSz |
| ADediting_1188853 | chr5_175495606_+ | SINE | Alu | Name=AluSz |
| ADediting_1188854 | chr5_175495686_+ | SINE | Alu | Name=AluSz |
| ADediting_1188855 | chr5_175495964_+ | SINE | Alu | Name=AluSp |
| ADediting_1188856 | chr5_175495994_+ | SINE | Alu | Name=AluSp |
| ADediting_1188857 | chr5_175496001_+ | SINE | Alu | Name=AluSp |
| ADediting_1188858 | chr5_175496005_+ | SINE | Alu | Name=AluSp |
| ADediting_1188859 | chr5_175496078_+ | SINE | Alu | Name=AluSp |
| ADediting_1188860 | chr5_175496118_+ | SINE | Alu | Name=AluSp |
| ADediting_1188861 | chr5_175496120_+ | SINE | Alu | Name=AluSp |
| ADediting_1188862 | chr5_175496133_+ | SINE | Alu | Name=AluSp |
| ADediting_1188863 | chr5_175496159_+ | SINE | Alu | Name=AluSp |
| ADediting_1188864 | chr5_175496174_+ | SINE | Alu | Name=AluSp |
| ADediting_1188865 | chr5_175496254_+ | SINE | Alu | Name=AluSx |
| ADediting_1188866 | chr5_175496280_+ | SINE | Alu | Name=AluSx |
| ADediting_1188867 | chr5_175496289_+ | SINE | Alu | Name=AluSx |
| ADediting_1188868 | chr5_175496940_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188869 | chr5_175496969_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188870 | chr5_175496989_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188871 | chr5_175496992_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188872 | chr5_175496993_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188873 | chr5_175497007_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188874 | chr5_175497015_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188875 | chr5_175497019_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188876 | chr5_175497029_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188877 | chr5_175497035_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188878 | chr5_175497070_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188879 | chr5_175497073_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188880 | chr5_175497074_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188881 | chr5_175497086_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188882 | chr5_175497098_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188883 | chr5_175497111_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188884 | chr5_175497124_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188885 | chr5_175497141_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188886 | chr5_175497151_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1188887 | chr5_175497667_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188888 | chr5_175497719_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188889 | chr5_175497783_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188890 | chr5_175497803_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188891 | chr5_175497809_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188892 | chr5_175497815_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188893 | chr5_175497851_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188894 | chr5_175497855_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188895 | chr5_175498983_+ | SINE | Alu | Name=AluSx |
| ADediting_1188896 | chr5_175498999_+ | SINE | Alu | Name=AluSx |
| ADediting_1188897 | chr5_175499000_+ | SINE | Alu | Name=AluSx |
| ADediting_1188898 | chr5_175499031_+ | SINE | Alu | Name=AluSx |
| ADediting_1188899 | chr5_175499076_+ | SINE | Alu | Name=AluSx |
| ADediting_1188900 | chr5_175499108_+ | SINE | Alu | Name=AluSx |
| ADediting_1188901 | chr5_175499176_+ | SINE | Alu | Name=AluSx |
| ADediting_1188902 | chr5_175499180_+ | SINE | Alu | Name=AluSx |
| ADediting_1188903 | chr5_175501108_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1188904 | chr5_175501162_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1188905 | chr5_175501186_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1188906 | chr5_175501202_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1188907 | chr5_175501251_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1188908 | chr5_175501259_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1188909 | chr5_175501275_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1188910 | chr5_175501345_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1188911 | chr5_175503739_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188912 | chr5_175503754_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188913 | chr5_175503786_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188914 | chr5_175503797_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188915 | chr5_175503893_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188916 | chr5_175503948_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188917 | chr5_175504320_+ | SINE | Alu | Name=AluSx |
| ADediting_1188918 | chr5_175504388_+ | SINE | Alu | Name=AluSx |
| ADediting_1188919 | chr5_175504389_+ | SINE | Alu | Name=AluSx |
| ADediting_1188920 | chr5_175504398_+ | SINE | Alu | Name=AluSx |
| ADediting_1188921 | chr5_175504399_+ | SINE | Alu | Name=AluSx |
| ADediting_1188922 | chr5_175504417_+ | SINE | Alu | Name=AluSx |
| ADediting_1188923 | chr5_175504419_+ | SINE | Alu | Name=AluSx |
| ADediting_1188924 | chr5_175504422_+ | SINE | Alu | Name=AluSx |
| ADediting_1188925 | chr5_175504424_+ | SINE | Alu | Name=AluSx |
| ADediting_1188926 | chr5_175504428_+ | SINE | Alu | Name=AluSx |
| ADediting_1188927 | chr5_175504469_+ | SINE | Alu | Name=AluSx |
| ADediting_1188928 | chr5_175504487_+ | SINE | Alu | Name=AluSx |
| ADediting_1188929 | chr5_175504904_+ | SINE | Alu | Name=AluY |
| ADediting_1188930 | chr5_175504935_+ | SINE | Alu | Name=AluY |
| ADediting_1188931 | chr5_175505280_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188932 | chr5_175505288_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188933 | chr5_175505334_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188934 | chr5_175505348_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188935 | chr5_175505349_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188936 | chr5_175505359_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188937 | chr5_175505416_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1188938 | chr5_175505881_+ | SINE | Alu | Name=AluSq |
| ADediting_1188939 | chr5_175505946_+ | SINE | Alu | Name=AluSq |
| ADediting_1188940 | chr5_175505989_+ | SINE | Alu | Name=AluSq |
| ADediting_1188941 | chr5_175506001_+ | SINE | Alu | Name=AluSq |
| ADediting_1188942 | chr5_175506038_+ | SINE | Alu | Name=AluSq |
| ADediting_1188943 | chr5_175506722_+ | SINE | Alu | Name=AluSg4 |
| ADediting_1188944 | chr5_175506725_+ | SINE | Alu | Name=AluSg4 |
| ADediting_1188945 | chr5_175506846_+ | SINE | Alu | Name=AluSg4 |
| ADediting_1188946 | chr5_175506866_+ | SINE | Alu | Name=AluSg4 |
| ADediting_1188947 | chr5_175507850_+ | SINE | Alu | Name=AluJo |
| ADediting_1188948 | chr5_175507852_+ | SINE | Alu | Name=AluJo |
| ADediting_1188949 | chr5_175508351_+ | SINE | Alu | Name=AluJb |
| ADediting_1188950 | chr5_175508681_+ | SINE | Alu | Name=AluSc |
| ADediting_1188951 | chr5_175508731_+ | SINE | Alu | Name=AluSc |
| ADediting_1188952 | chr5_175508741_+ | SINE | Alu | Name=AluSc |
| ADediting_1188953 | chr5_175508755_+ | SINE | Alu | Name=AluSc |
| ADediting_1188954 | chr5_175508779_+ | SINE | Alu | Name=AluSc |
| ADediting_1188955 | chr5_175508878_+ | SINE | Alu | Name=AluSc |
| ADediting_1188956 | chr5_175508897_+ | SINE | Alu | Name=AluSc |
| ADediting_1188957 | chr5_175508909_+ | SINE | Alu | Name=AluSc |
| ADediting_1188958 | chr5_175508917_+ | SINE | Alu | Name=AluSc |
| ADediting_1188959 | chr5_175513039_+ | SINE | Alu | Name=AluSx |
| ADediting_1188960 | chr5_175513124_+ | SINE | Alu | Name=AluSx |
| ADediting_1188961 | chr5_175513125_+ | SINE | Alu | Name=AluSx |
| ADediting_1188962 | chr5_175513136_+ | SINE | Alu | Name=AluSx |
| ADediting_1188963 | chr5_175513179_+ | SINE | Alu | Name=AluSx |
| ADediting_1188964 | chr5_175513180_+ | SINE | Alu | Name=AluSx |
| ADediting_1188965 | chr5_175515129_+ | SINE | Alu | Name=AluJo |
| ADediting_1188966 | chr5_175515134_+ | SINE | Alu | Name=AluJo |
| ADediting_1188967 | chr5_175527959_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188968 | chr5_175527975_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188969 | chr5_175527999_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188970 | chr5_175528000_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188971 | chr5_175528019_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188972 | chr5_175528037_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188973 | chr5_175528050_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188974 | chr5_175528060_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188975 | chr5_175528062_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188976 | chr5_175528086_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188977 | chr5_175528087_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188978 | chr5_175528097_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188979 | chr5_175528103_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188980 | chr5_175528169_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188981 | chr5_175528170_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188982 | chr5_175528183_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188983 | chr5_175528185_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188984 | chr5_175528186_+ | SINE | Alu | Name=AluYc3 |
| ADediting_1188985 | chr5_175529081_+ | SINE | Alu | Name=AluSp |
| ADediting_1188986 | chr5_175529082_+ | SINE | Alu | Name=AluSp |
| ADediting_1188987 | chr5_175529087_+ | SINE | Alu | Name=AluSp |
| ADediting_1188988 | chr5_175529090_+ | SINE | Alu | Name=AluSp |
| ADediting_1188989 | chr5_175529098_+ | SINE | Alu | Name=AluSp |
| ADediting_1188990 | chr5_175529127_+ | SINE | Alu | Name=AluSp |
| ADediting_1188991 | chr5_175529160_+ | SINE | Alu | Name=AluSp |
| ADediting_1188992 | chr5_175529161_+ | SINE | Alu | Name=AluSp |
| ADediting_1188993 | chr5_175529172_+ | SINE | Alu | Name=AluSp |
| ADediting_1188994 | chr5_175529175_+ | SINE | Alu | Name=AluSp |
| ADediting_1188995 | chr5_175529176_+ | SINE | Alu | Name=AluSp |
| ADediting_1188996 | chr5_175529177_+ | SINE | Alu | Name=AluSp |
| ADediting_1188997 | chr5_175529178_+ | SINE | Alu | Name=AluSp |
| ADediting_1188998 | chr5_175529179_+ | SINE | Alu | Name=AluSp |
| ADediting_1188999 | chr5_175529181_+ | SINE | Alu | Name=AluSp |
| ADediting_1189000 | chr5_175529183_+ | SINE | Alu | Name=AluSp |
| ADediting_1189001 | chr5_175529184_+ | SINE | Alu | Name=AluSp |
| ADediting_1189002 | chr5_175529185_+ | SINE | Alu | Name=AluSp |
| ADediting_1189003 | chr5_175529187_+ | SINE | Alu | Name=AluSp |
| ADediting_1189004 | chr5_175529188_+ | SINE | Alu | Name=AluSp |
| ADediting_1189005 | chr5_175529191_+ | SINE | Alu | Name=AluSp |
| ADediting_1189006 | chr5_175529195_+ | SINE | Alu | Name=AluSp |
| ADediting_1189007 | chr5_175529199_+ | SINE | Alu | Name=AluSp |
| ADediting_1189008 | chr5_175529215_+ | SINE | Alu | Name=AluSp |
| ADediting_1189009 | chr5_175529217_+ | SINE | Alu | Name=AluSp |
| ADediting_1189010 | chr5_175529218_+ | SINE | Alu | Name=AluSp |
| ADediting_1189011 | chr5_175529223_+ | SINE | Alu | Name=AluSp |
| ADediting_1189012 | chr5_175529227_+ | SINE | Alu | Name=AluSp |
| ADediting_1189013 | chr5_175529240_+ | SINE | Alu | Name=AluSp |
| ADediting_1189014 | chr5_175529244_+ | SINE | Alu | Name=AluSp |
| ADediting_1189015 | chr5_175529247_+ | SINE | Alu | Name=AluSp |
| ADediting_1189016 | chr5_175529250_+ | SINE | Alu | Name=AluSp |
| ADediting_1189017 | chr5_175529258_+ | SINE | Alu | Name=AluSp |
| ADediting_1189018 | chr5_175529259_+ | SINE | Alu | Name=AluSp |
| ADediting_1189019 | chr5_175529266_+ | SINE | Alu | Name=AluSp |
| ADediting_1189020 | chr5_175529279_+ | SINE | Alu | Name=AluSp |
| ADediting_1189021 | chr5_175529283_+ | SINE | Alu | Name=AluSp |
| ADediting_1189022 | chr5_175529287_+ | SINE | Alu | Name=AluSp |
| ADediting_1189023 | chr5_175529288_+ | SINE | Alu | Name=AluSp |
| ADediting_1189024 | chr5_175529295_+ | SINE | Alu | Name=AluSp |
| ADediting_1189025 | chr5_175529303_+ | SINE | Alu | Name=AluSp |
| ADediting_1189026 | chr5_175529323_+ | SINE | Alu | Name=AluSp |
| ADediting_1189027 | chr5_175529327_+ | SINE | Alu | Name=AluSp |
| ADediting_1189028 | chr5_175529328_+ | SINE | Alu | Name=AluSp |
| ADediting_1189029 | chr5_175529329_+ | SINE | Alu | Name=AluSp |
| ADediting_1189030 | chr5_175529334_+ | SINE | Alu | Name=AluSp |
| ADediting_1580766 | chr5_175513029_+ | SINE | Alu | Name=AluSx |
| ADediting_1580767 | chr5_175513142_+ | SINE | Alu | Name=AluSx |
| ADediting_1580768 | chr5_175515038_+ | SINE | Alu | Name=AluJo |
| ADediting_1580769 | chr5_175515203_+ | SINE | Alu | Name=AluJo |
| ADediting_1580770 | chr5_175524029_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1580771 | chr5_175525640_+ | SINE | Alu | Name=AluJr |
| ADediting_1580772 | chr5_175525665_+ | SINE | Alu | Name=AluJr |
| ADediting_1580773 | chr5_175525678_+ | SINE | Alu | Name=AluJr |
| ADediting_1656111 | chr5_175495609_+ | SINE | Alu | Name=AluSz |
Top |
RNA A-to-I editing events in the alternative splicing sites for SFXN1 |
RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for SFXN1 |
Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.* The grey color means N/A. |
Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for SFXN1 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for SFXN1 |
RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1188967 | chr5_175527959_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4486 | chr5 | 175527957 | 175527963 | 7mer-m8 | 175527948 | 175527964 | 145 | -18.64 |
| ADediting_1188970 | chr5_175528000_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-17-3p | chr5 | 175527993 | 175527999 | 7mer-m8 | 175527977 | 175528000 | 152 | -20.36 |
| ADediting_1188970 | chr5_175528000_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-596 | chr5 | 175527996 | 175528002 | 7mer-m8 | 175527983 | 175528003 | 140 | -18.43 |
| ADediting_1188971 | chr5_175528019_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4634 | chr5 | 175528016 | 175528022 | 7mer-m8 | 175528008 | 175528023 | 149 | -34.84 |
| ADediting_1188972 | chr5_175528037_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6089 | chr5 | 175528035 | 175528041 | 7mer-m8 | 175528018 | 175528042 | 169 | -41.59 |
| ADediting_1188973 | chr5_175528050_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6819-3p | chr5 | 175528046 | 175528052 | 7mer-m8 | 175528033 | 175528053 | 140 | -15.28 |
| ADediting_1188973 | chr5_175528050_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6849-3p | chr5 | 175528048 | 175528054 | 7mer-m8 | 175528034 | 175528055 | 142 | -17.07 |
| ADediting_1188973 | chr5_175528050_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6877-3p | chr5 | 175528046 | 175528052 | 7mer-m8 | 175528033 | 175528053 | 140 | -19.86 |
| ADediting_1188974 | chr5_175528060_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-17-3p | chr5 | 175528056 | 175528062 | 7mer-m8 | 175528042 | 175528063 | 142 | -18.85 |
| ADediting_1188976 | chr5_175528086_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-34a-3p | chr5 | 175528082 | 175528088 | 7mer-m8 | 175528068 | 175528089 | 140 | -8.62 |
| ADediting_1188977 | chr5_175528087_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-548ae-3p | chr5 | 175528085 | 175528091 | 7mer-m8 | 175528072 | 175528092 | 141 | -6.23 |
| ADediting_1188977 | chr5_175528087_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-548ah-3p | chr5 | 175528085 | 175528091 | 7mer-m8 | 175528070 | 175528092 | 143 | -6.87 |
| ADediting_1188977 | chr5_175528087_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-548aj-3p | chr5 | 175528085 | 175528091 | 7mer-m8 | 175528072 | 175528092 | 141 | -7.13 |
| ADediting_1188977 | chr5_175528087_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-548am-3p | chr5 | 175528085 | 175528091 | 7mer-m8 | 175528070 | 175528092 | 143 | -6.23 |
| ADediting_1188977 | chr5_175528087_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-548aq-3p | chr5 | 175528085 | 175528091 | 7mer-m8 | 175528071 | 175528092 | 141 | -6.3 |
| ADediting_1188977 | chr5_175528087_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-548j-3p | chr5 | 175528085 | 175528091 | 7mer-m8 | 175528072 | 175528092 | 141 | -6.23 |
| ADediting_1188977 | chr5_175528087_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-548x-3p | chr5 | 175528085 | 175528091 | 7mer-m8 | 175528073 | 175528092 | 141 | -7.13 |
| ADediting_1188977 | chr5_175528087_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-7844-5p | chr5 | 175528083 | 175528089 | 7mer-m8 | 175528069 | 175528090 | 164 | -22.52 |
| ADediting_1188980 | chr5_175528169_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6771-5p | chr5 | 175528163 | 175528169 | 7mer-m8 | 175528149 | 175528170 | 159 | -34.04 |
| ADediting_1188981 | chr5_175528170_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-3192-5p | chr5 | 175528163 | 175528169 | 7mer-m8 | 175528147 | 175528170 | 156 | -30.55 |
| ADediting_1188981 | chr5_175528170_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-3620-3p | chr5 | 175528167 | 175528173 | 7mer-m8 | 175528153 | 175528174 | 140 | -15.58 |
| ADediting_1188981 | chr5_175528170_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4292 | chr5 | 175528165 | 175528171 | 7mer-m8 | 175528156 | 175528172 | 148 | -25.77 |
| ADediting_1188981 | chr5_175528170_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6791-5p | chr5 | 175528165 | 175528171 | 7mer-m8 | 175528148 | 175528172 | 162 | -34.42 |
| ADediting_1188982 | chr5_175528183_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4327 | chr5 | 175528181 | 175528187 | 7mer-m8 | 175528170 | 175528188 | 140 | -12.38 |
| ADediting_1188985 | chr5_175529081_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-513a-5p | chr5 | 175529075 | 175529081 | 7mer-m8 | 175529065 | 175529082 | 152 | -21.67 |
| ADediting_1188985 | chr5_175529081_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-638 | chr5 | 175529080 | 175529086 | 7mer-1a | 175529062 | 175529086 | 151 | -34.49 |
| ADediting_1188986 | chr5_175529082_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-8052 | chr5 | 175529080 | 175529086 | 7mer-1a | 175529068 | 175529086 | 143 | -28.36 |
| ADediting_1188987 | chr5_175529087_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-371a-3p | chr5 | 175529085 | 175529091 | 7mer-m8 | 175529070 | 175529092 | 145 | -16.98 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-518a-3p | chr5 | 175529087 | 175529093 | 7mer-m8 | 175529073 | 175529094 | 145 | -16.17 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-518b | chr5 | 175529087 | 175529093 | 7mer-m8 | 175529072 | 175529094 | 147 | -20.81 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-518c-3p | chr5 | 175529087 | 175529093 | 7mer-m8 | 175529071 | 175529094 | 147 | -18.3 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-518d-3p | chr5 | 175529087 | 175529093 | 7mer-m8 | 175529074 | 175529094 | 145 | -17.84 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-518e-3p | chr5 | 175529086 | 175529092 | 7mer-m8 | 175529072 | 175529093 | 146 | -14.15 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-518f-3p | chr5 | 175529087 | 175529093 | 7mer-m8 | 175529074 | 175529094 | 145 | -16.5 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-526a-3p | chr5 | 175529087 | 175529093 | 7mer-m8 | 175529072 | 175529094 | 147 | -16.73 |
| ADediting_1188989 | chr5_175529098_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-10392-3p | chr5 | 175529096 | 175529103 | 8mer-1a | 175529079 | 175529103 | 144 | -22.69 |
| ADediting_1188991 | chr5_175529160_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6895-3p | chr5 | 175529155 | 175529161 | 7mer-m8 | 175529141 | 175529162 | 158 | -20.36 |
| ADediting_1188992 | chr5_175529161_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4508 | chr5 | 175529159 | 175529165 | 7mer-m8 | 175529150 | 175529166 | 140 | -21.38 |
| ADediting_1188992 | chr5_175529161_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6815-3p | chr5 | 175529156 | 175529162 | 7mer-m8 | 175529142 | 175529163 | 147 | -20.56 |
| ADediting_1188993 | chr5_175529172_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-2467-3p | chr5 | 175529166 | 175529172 | 7mer-m8 | 175529152 | 175529173 | 155 | -22.62 |
| ADediting_1188993 | chr5_175529172_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-374b-3p | chr5 | 175529169 | 175529176 | 8mer-1a | 175529154 | 175529176 | 142 | -9.59 |
| ADediting_1188994 | chr5_175529175_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-222-5p | chr5 | 175529169 | 175529176 | 8mer-1a | 175529155 | 175529176 | 140 | -11.22 |
| ADediting_1188994 | chr5_175529175_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-30a-3p | chr5 | 175529171 | 175529178 | 8mer-1a | 175529158 | 175529178 | 145 | -10.28 |
| ADediting_1188994 | chr5_175529175_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-30d-3p | chr5 | 175529171 | 175529178 | 8mer-1a | 175529158 | 175529178 | 150 | -9.3 |
| ADediting_1188994 | chr5_175529175_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-30e-3p | chr5 | 175529171 | 175529178 | 8mer-1a | 175529158 | 175529178 | 145 | -10.38 |
| ADediting_1188994 | chr5_175529175_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-936 | chr5 | 175529168 | 175529175 | 8mer-1a | 175529153 | 175529175 | 159 | -20.79 |
| ADediting_1188995 | chr5_175529176_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-325 | chr5 | 175529169 | 175529176 | 8mer-1a | 175529154 | 175529176 | 145 | -11.62 |
| ADediting_1188996 | chr5_175529177_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-630 | chr5 | 175529175 | 175529182 | 8mer-1a | 175529162 | 175529182 | 151 | -13.49 |
| ADediting_1188999 | chr5_175529181_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-153-5p | chr5 | 175529174 | 175529180 | 7mer-m8 | 175529158 | 175529181 | 147 | -8.12 |
| ADediting_1188999 | chr5_175529181_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-3680-3p | chr5 | 175529178 | 175529185 | 8mer-1a | 175529163 | 175529185 | 140 | -15.09 |
| ADediting_1189001 | chr5_175529184_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4742-3p | chr5 | 175529177 | 175529184 | 8mer-1a | 175529162 | 175529184 | 142 | -9.18 |
| ADediting_1189002 | chr5_175529185_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-578 | chr5 | 175529180 | 175529187 | 8mer-1a | 175529167 | 175529187 | 148 | -9.39 |
| ADediting_1189002 | chr5_175529185_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-643 | chr5 | 175529178 | 175529185 | 8mer-1a | 175529163 | 175529185 | 147 | -13.72 |
| ADediting_1189005 | chr5_175529191_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-3190-5p | chr5 | 175529189 | 175529195 | 7mer-m8 | 175529177 | 175529196 | 143 | -16.24 |
| ADediting_1189005 | chr5_175529191_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-548s | chr5 | 175529188 | 175529194 | 7mer-m8 | 175529173 | 175529195 | 140 | -11.19 |
| ADediting_1189008 | chr5_175529215_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-10399-5p | chr5 | 175529212 | 175529218 | 7mer-m8 | 175529196 | 175529219 | 154 | -14.35 |
| ADediting_1189008 | chr5_175529215_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6504-3p | chr5 | 175529212 | 175529218 | 7mer-m8 | 175529199 | 175529219 | 141 | -12.41 |
| ADediting_1189008 | chr5_175529215_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-7151-3p | chr5 | 175529210 | 175529217 | 8mer-1a | 175529201 | 175529217 | 142 | -15.49 |
| ADediting_1189009 | chr5_175529217_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-638 | chr5 | 175529216 | 175529222 | 7mer-1a | 175529198 | 175529222 | 152 | -30.14 |
| ADediting_1189010 | chr5_175529218_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-625-3p | chr5 | 175529212 | 175529218 | 7mer-m8 | 175529198 | 175529219 | 148 | -16.22 |
| ADediting_1189010 | chr5_175529218_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-8052 | chr5 | 175529216 | 175529222 | 7mer-1a | 175529204 | 175529222 | 147 | -24.08 |
| ADediting_1189012 | chr5_175529227_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-1207-3p | chr5 | 175529220 | 175529226 | 7mer-m8 | 175529210 | 175529227 | 140 | -12.56 |
| ADediting_1189012 | chr5_175529227_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-646 | chr5 | 175529222 | 175529228 | 7mer-m8 | 175529211 | 175529229 | 145 | -15.97 |
| ADediting_1189013 | chr5_175529240_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6849-3p | chr5 | 175529233 | 175529239 | 7mer-m8 | 175529219 | 175529240 | 140 | -15.93 |
| ADediting_1189014 | chr5_175529244_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-1224-3p | chr5 | 175529239 | 175529246 | 8mer-1a | 175529227 | 175529246 | 156 | -26.03 |
| ADediting_1189014 | chr5_175529244_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-1260a | chr5 | 175529240 | 175529246 | 7mer-m8 | 175529230 | 175529247 | 164 | -28.81 |
| ADediting_1189014 | chr5_175529244_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-1260b | chr5 | 175529240 | 175529246 | 7mer-m8 | 175529229 | 175529247 | 161 | -23.52 |
| ADediting_1189014 | chr5_175529244_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4713-5p | chr5 | 175529242 | 175529249 | 8mer-1a | 175529229 | 175529249 | 166 | -33.39 |
| ADediting_1189014 | chr5_175529244_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-532-3p | chr5 | 175529241 | 175529248 | 8mer-1a | 175529229 | 175529248 | 147 | -19.78 |
| ADediting_1189015 | chr5_175529247_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-3162-3p | chr5 | 175529240 | 175529246 | 7mer-m8 | 175529228 | 175529247 | 157 | -26.24 |
| ADediting_1189016 | chr5_175529250_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4431 | chr5 | 175529246 | 175529252 | 7mer-m8 | 175529231 | 175529253 | 144 | -17.94 |
| ADediting_1189017 | chr5_175529258_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-127-3p | chr5 | 175529256 | 175529262 | 7mer-m8 | 175529242 | 175529263 | 146 | -23.12 |
| ADediting_1189019 | chr5_175529266_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-3943 | chr5 | 175529262 | 175529268 | 7mer-m8 | 175529248 | 175529269 | 159 | -28.78 |
| ADediting_1189019 | chr5_175529266_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6840-5p | chr5 | 175529260 | 175529266 | 7mer-m8 | 175529242 | 175529267 | 143 | -24.27 |
| ADediting_1189021 | chr5_175529283_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-324-3p | chr5 | 175529276 | 175529282 | 7mer-m8 | 175529257 | 175529283 | 149 | -31.2 |
| ADediting_1189022 | chr5_175529287_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4638-5p | chr5 | 175529282 | 175529289 | 8mer-1a | 175529270 | 175529289 | 146 | -20.28 |
| ADediting_1189023 | chr5_175529288_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-149-5p | chr5 | 175529281 | 175529287 | 7mer-m8 | 175529262 | 175529288 | 155 | -32.22 |
| ADediting_1189024 | chr5_175529295_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4634 | chr5 | 175529290 | 175529297 | 8mer-1a | 175529277 | 175529297 | 147 | -19.33 |
| ADediting_1189024 | chr5_175529295_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-652-3p | chr5 | 175529292 | 175529298 | 7mer-m8 | 175529278 | 175529299 | 154 | -18.13 |
| ADediting_1189026 | chr5_175529323_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-1249-3p | chr5 | 175529319 | 175529326 | 8mer-1a | 175529305 | 175529326 | 143 | -18.19 |
| ADediting_1189026 | chr5_175529323_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6726-3p | chr5 | 175529320 | 175529327 | 8mer-1a | 175529305 | 175529327 | 152 | -21.44 |
| ADediting_1189026 | chr5_175529323_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6780b-3p | chr5 | 175529317 | 175529323 | 7mer-m8 | 175529304 | 175529324 | 145 | -15.11 |
| ADediting_1189027 | chr5_175529327_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-572 | chr5 | 175529321 | 175529328 | 8mer-1a | 175529310 | 175529328 | 144 | -24.49 |
| ADediting_1189028 | chr5_175529328_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4294 | chr5 | 175529326 | 175529333 | 8mer-1a | 175529317 | 175529333 | 140 | -15.25 |
| ADediting_1189029 | chr5_175529329_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6874-5p | chr5 | 175529327 | 175529333 | 7mer-m8 | 175529312 | 175529334 | 140 | -14.42 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1188967 | chr5_175527959_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-1262 | chr5 | 175527956 | 175527962 | 7mer-m8 | 175527942 | 175527963 | 140 | -15.41 |
| ADediting_1188967 | chr5_175527959_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4701-3p | chr5 | 175527956 | 175527962 | 7mer-m8 | 175527943 | 175527963 | 153 | -22.36 |
| ADediting_1188967 | chr5_175527959_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6736-5p | chr5 | 175527956 | 175527962 | 7mer-m8 | 175527943 | 175527963 | 143 | -20.47 |
| ADediting_1188968 | chr5_175527975_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-324-3p | chr5 | 175527972 | 175527978 | 7mer-m8 | 175527957 | 175527979 | 148 | -24.16 |
| ADediting_1188968 | chr5_175527975_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4252 | chr5 | 175527973 | 175527979 | 7mer-m8 | 175527960 | 175527980 | 149 | -21.82 |
| ADediting_1188969 | chr5_175527999_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4327 | chr5 | 175527995 | 175528001 | 7mer-m8 | 175527980 | 175528002 | 151 | -22.19 |
| ADediting_1188969 | chr5_175527999_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6516-5p | chr5 | 175527993 | 175527999 | 7mer-m8 | 175527981 | 175528000 | 144 | -15.29 |
| ADediting_1188970 | chr5_175528000_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4327 | chr5 | 175527995 | 175528001 | 7mer-m8 | 175527980 | 175528002 | 151 | -22.19 |
| ADediting_1188970 | chr5_175528000_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6516-5p | chr5 | 175527993 | 175527999 | 7mer-m8 | 175527981 | 175528000 | 144 | -15.29 |
| ADediting_1188972 | chr5_175528037_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4478 | chr5 | 175528034 | 175528040 | 7mer-m8 | 175528026 | 175528041 | 149 | -25.05 |
| ADediting_1188972 | chr5_175528037_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4649-3p | chr5 | 175528031 | 175528037 | 7mer-m8 | 175528018 | 175528038 | 140 | -14.11 |
| ADediting_1188972 | chr5_175528037_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-485-5p | chr5 | 175528035 | 175528041 | 7mer-m8 | 175528021 | 175528042 | 153 | -20.53 |
| ADediting_1188972 | chr5_175528037_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-7160-5p | chr5 | 175528032 | 175528038 | 7mer-m8 | 175528019 | 175528039 | 146 | -18.19 |
| ADediting_1188974 | chr5_175528060_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-20b-3p | chr5 | 175528056 | 175528062 | 7mer-m8 | 175528042 | 175528063 | 151 | -18.98 |
| ADediting_1188975 | chr5_175528062_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-20b-3p | chr5 | 175528056 | 175528062 | 7mer-m8 | 175528042 | 175528063 | 151 | -18.98 |
| ADediting_1188975 | chr5_175528062_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6720-3p | chr5 | 175528060 | 175528066 | 7mer-m8 | 175528046 | 175528067 | 147 | -20.67 |
| ADediting_1188980 | chr5_175528169_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-30b-3p | chr5 | 175528162 | 175528169 | 8mer-1a | 175528148 | 175528169 | 147 | -16.29 |
| ADediting_1188980 | chr5_175528169_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-3189-3p | chr5 | 175528165 | 175528171 | 7mer-m8 | 175528150 | 175528172 | 145 | -20.15 |
| ADediting_1188980 | chr5_175528169_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-3689a-3p | chr5 | 175528162 | 175528169 | 8mer-1a | 175528148 | 175528169 | 141 | -19.06 |
| ADediting_1188980 | chr5_175528169_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-3689b-3p | chr5 | 175528162 | 175528169 | 8mer-1a | 175528148 | 175528169 | 141 | -19.18 |
| ADediting_1188980 | chr5_175528169_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-3689c | chr5 | 175528162 | 175528169 | 8mer-1a | 175528148 | 175528169 | 141 | -19.18 |
| ADediting_1188980 | chr5_175528169_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6779-5p | chr5 | 175528162 | 175528169 | 8mer-1a | 175528146 | 175528169 | 143 | -26.09 |
| ADediting_1188980 | chr5_175528169_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6813-3p | chr5 | 175528166 | 175528172 | 7mer-m8 | 175528153 | 175528173 | 140 | -15.63 |
| ADediting_1188980 | chr5_175528169_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-887-5p | chr5 | 175528163 | 175528169 | 7mer-m8 | 175528150 | 175528170 | 147 | -18.54 |
| ADediting_1188981 | chr5_175528170_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-3189-3p | chr5 | 175528165 | 175528171 | 7mer-m8 | 175528150 | 175528172 | 145 | -20.15 |
| ADediting_1188981 | chr5_175528170_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6813-3p | chr5 | 175528166 | 175528172 | 7mer-m8 | 175528153 | 175528173 | 140 | -15.63 |
| ADediting_1188981 | chr5_175528170_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-887-5p | chr5 | 175528163 | 175528169 | 7mer-m8 | 175528150 | 175528170 | 147 | -18.54 |
| ADediting_1188985 | chr5_175529081_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-10399-5p | chr5 | 175529076 | 175529082 | 7mer-m8 | 175529063 | 175529083 | 140 | -9.6 |
| ADediting_1188985 | chr5_175529081_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6504-3p | chr5 | 175529076 | 175529082 | 7mer-m8 | 175529062 | 175529083 | 145 | -14.35 |
| ADediting_1188986 | chr5_175529082_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-10399-5p | chr5 | 175529076 | 175529082 | 7mer-m8 | 175529063 | 175529083 | 140 | -9.6 |
| ADediting_1188986 | chr5_175529082_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-5089-5p | chr5 | 175529080 | 175529086 | 7mer-m8 | 175529065 | 175529087 | 148 | -14.09 |
| ADediting_1188986 | chr5_175529082_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6504-3p | chr5 | 175529076 | 175529082 | 7mer-m8 | 175529062 | 175529083 | 145 | -14.35 |
| ADediting_1188987 | chr5_175529087_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-5089-5p | chr5 | 175529080 | 175529086 | 7mer-m8 | 175529065 | 175529087 | 148 | -14.09 |
| ADediting_1188987 | chr5_175529087_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6506-5p | chr5 | 175529081 | 175529087 | 7mer-m8 | 175529066 | 175529088 | 144 | -13.6 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-302a-3p | chr5 | 175529086 | 175529092 | 7mer-m8 | 175529072 | 175529093 | 142 | -11.02 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-302b-3p | chr5 | 175529086 | 175529092 | 7mer-m8 | 175529071 | 175529093 | 141 | -9.81 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-302c-3p | chr5 | 175529086 | 175529092 | 7mer-m8 | 175529073 | 175529093 | 145 | -14.35 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-302d-3p | chr5 | 175529086 | 175529092 | 7mer-m8 | 175529066 | 175529093 | 144 | -12.04 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-302e | chr5 | 175529086 | 175529092 | 7mer-m8 | 175529077 | 175529093 | 141 | -8.62 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-372-3p | chr5 | 175529086 | 175529092 | 7mer-m8 | 175529073 | 175529093 | 153 | -13.9 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-519d-3p | chr5 | 175529087 | 175529093 | 7mer-m8 | 175529074 | 175529094 | 146 | -13.74 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-520a-3p | chr5 | 175529086 | 175529092 | 7mer-m8 | 175529072 | 175529093 | 140 | -10.31 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-520b-3p | chr5 | 175529086 | 175529092 | 7mer-m8 | 175529072 | 175529093 | 142 | -18.96 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-520c-3p | chr5 | 175529086 | 175529092 | 7mer-m8 | 175529071 | 175529093 | 147 | -18.96 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-520d-3p | chr5 | 175529086 | 175529092 | 7mer-m8 | 175529071 | 175529093 | 143 | -15.35 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-520e-3p | chr5 | 175529086 | 175529092 | 7mer-m8 | 175529073 | 175529093 | 140 | -15.57 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-520g-3p | chr5 | 175529088 | 175529094 | 7mer-m8 | 175529071 | 175529095 | 152 | -16.09 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-520h | chr5 | 175529088 | 175529094 | 7mer-m8 | 175529074 | 175529095 | 150 | -15.08 |
| ADediting_1188988 | chr5_175529090_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-526b-3p | chr5 | 175529087 | 175529093 | 7mer-m8 | 175529072 | 175529094 | 147 | -15.22 |
| ADediting_1188989 | chr5_175529098_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-150-5p | chr5 | 175529092 | 175529098 | 7mer-m8 | 175529078 | 175529099 | 140 | -15.8 |
| ADediting_1188989 | chr5_175529098_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6778-3p | chr5 | 175529094 | 175529100 | 7mer-m8 | 175529081 | 175529101 | 143 | -13.97 |
| ADediting_1188991 | chr5_175529160_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-193b-5p | chr5 | 175529158 | 175529164 | 7mer-m8 | 175529144 | 175529165 | 141 | -20.42 |
| ADediting_1188992 | chr5_175529161_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-193b-5p | chr5 | 175529158 | 175529164 | 7mer-m8 | 175529144 | 175529165 | 141 | -20.42 |
| ADediting_1188993 | chr5_175529172_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6866-5p | chr5 | 175529165 | 175529171 | 7mer-m8 | 175529150 | 175529172 | 147 | -13.79 |
| ADediting_1189003 | chr5_175529187_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4735-5p | chr5 | 175529185 | 175529191 | 7mer-m8 | 175529171 | 175529192 | 140 | -4.28 |
| ADediting_1189004 | chr5_175529188_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4735-5p | chr5 | 175529185 | 175529191 | 7mer-m8 | 175529171 | 175529192 | 140 | -4.28 |
| ADediting_1189005 | chr5_175529191_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4735-5p | chr5 | 175529185 | 175529191 | 7mer-m8 | 175529171 | 175529192 | 140 | -4.28 |
| ADediting_1189005 | chr5_175529191_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4794 | chr5 | 175529189 | 175529195 | 7mer-m8 | 175529175 | 175529196 | 140 | -12.3 |
| ADediting_1189005 | chr5_175529191_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-664a-5p | chr5 | 175529189 | 175529195 | 7mer-m8 | 175529173 | 175529196 | 141 | -13.4 |
| ADediting_1189006 | chr5_175529195_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4794 | chr5 | 175529189 | 175529195 | 7mer-m8 | 175529175 | 175529196 | 140 | -12.3 |
| ADediting_1189006 | chr5_175529195_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-664a-5p | chr5 | 175529189 | 175529195 | 7mer-m8 | 175529173 | 175529196 | 141 | -13.4 |
| ADediting_1189007 | chr5_175529199_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-5581-3p | chr5 | 175529196 | 175529202 | 7mer-m8 | 175529181 | 175529203 | 155 | -20.03 |
| ADediting_1189007 | chr5_175529199_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6872-3p | chr5 | 175529195 | 175529202 | 8mer-1a | 175529182 | 175529202 | 145 | -14.37 |
| ADediting_1189010 | chr5_175529218_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-5089-5p | chr5 | 175529216 | 175529222 | 7mer-m8 | 175529204 | 175529223 | 142 | -12.75 |
| ADediting_1189011 | chr5_175529223_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-5089-5p | chr5 | 175529216 | 175529222 | 7mer-m8 | 175529204 | 175529223 | 142 | -12.75 |
| ADediting_1189011 | chr5_175529223_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6506-5p | chr5 | 175529217 | 175529223 | 7mer-m8 | 175529203 | 175529224 | 143 | -14.51 |
| ADediting_1189013 | chr5_175529240_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4777-3p | chr5 | 175529237 | 175529243 | 7mer-m8 | 175529219 | 175529244 | 154 | -19.06 |
| ADediting_1189014 | chr5_175529244_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4777-3p | chr5 | 175529237 | 175529243 | 7mer-m8 | 175529219 | 175529244 | 154 | -19.06 |
| ADediting_1189017 | chr5_175529258_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-498-5p | chr5 | 175529252 | 175529258 | 7mer-m8 | 175529237 | 175529259 | 142 | -10.4 |
| ADediting_1189018 | chr5_175529259_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-498-5p | chr5 | 175529252 | 175529258 | 7mer-m8 | 175529237 | 175529259 | 142 | -10.4 |
| ADediting_1189019 | chr5_175529266_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4267 | chr5 | 175529264 | 175529271 | 8mer-1a | 175529256 | 175529271 | 140 | -18.69 |
| ADediting_1189019 | chr5_175529266_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6736-3p | chr5 | 175529263 | 175529269 | 7mer-m8 | 175529250 | 175529270 | 141 | -14.81 |
| ADediting_1189020 | chr5_175529279_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4772-3p | chr5 | 175529273 | 175529279 | 7mer-m8 | 175529261 | 175529280 | 152 | -16.85 |
| ADediting_1189021 | chr5_175529283_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4284 | chr5 | 175529279 | 175529286 | 8mer-1a | 175529269 | 175529286 | 151 | -18.62 |
| ADediting_1189024 | chr5_175529295_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-675-5p | chr5 | 175529291 | 175529297 | 7mer-1a | 175529275 | 175529297 | 141 | -25.01 |
| ADediting_1189025 | chr5_175529303_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-106a-3p | chr5 | 175529296 | 175529302 | 7mer-m8 | 175529281 | 175529303 | 144 | -11.01 |
| ADediting_1189025 | chr5_175529303_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-122-5p | chr5 | 175529301 | 175529307 | 7mer-1a | 175529289 | 175529307 | 143 | -24.82 |
| ADediting_1189025 | chr5_175529303_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-130a-3p | chr5 | 175529298 | 175529304 | 7mer-m8 | 175529284 | 175529305 | 152 | -12.13 |
| ADediting_1189025 | chr5_175529303_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-3666 | chr5 | 175529298 | 175529304 | 7mer-m8 | 175529284 | 175529305 | 149 | -13.57 |
| ADediting_1189025 | chr5_175529303_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4295 | chr5 | 175529298 | 175529304 | 7mer-m8 | 175529288 | 175529305 | 152 | -12.01 |
| ADediting_1189025 | chr5_175529303_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-504-3p | chr5 | 175529300 | 175529307 | 8mer-1a | 175529287 | 175529307 | 151 | -20.88 |
| ADediting_1189026 | chr5_175529323_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6812-3p | chr5 | 175529319 | 175529326 | 8mer-1a | 175529306 | 175529326 | 140 | -18.1 |
| ADediting_1189030 | chr5_175529334_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-4534 | chr5 | 175529329 | 175529335 | 7mer-m8 | 175529320 | 175529336 | 140 | -15.43 |
| ADediting_1189030 | chr5_175529334_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-6514-5p | chr5 | 175529328 | 175529334 | 7mer-m8 | 175529313 | 175529335 | 141 | -12.85 |
| ADediting_1189030 | chr5_175529334_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-8082 | chr5 | 175529329 | 175529335 | 7mer-m8 | 175529315 | 175529336 | 142 | -13.7 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-337-3p | chr5 | 175528353 | 175528359 | 7mer-m8 | 175528339 | 175528360 | 152 | -20.24 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-5581-3p | chr5 | 175529196 | 175529202 | 7mer-m8 | 175529181 | 175529203 | 155 | -20.03 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-589-5p | chr5 | 175526817 | 175526823 | 7mer-m8 | 175526803 | 175526824 | 145 | -12.44 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-641 | chr5 | 175527620 | 175527626 | 7mer-m8 | 175527603 | 175527627 | 148 | -14.63 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000164466.13 | ENST00000321442.10 | SFXN1-201 | hsa-miR-641 | chr5 | 175527620 | 175527626 | 7mer-m8 | 175527603 | 175527627 | 148 | -14.63 |
Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for SFXN1 |
- RNA A-to-I editing in mRNA.* Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000321442.10 | protein_coding | ![]() | ![]() |
RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1188967 | ENST00000321442.10 | chr5_175527959_+ | 2283 | -1416.30 | -1412.70 | -1432.60 |
| ADediting_1188968 | ENST00000321442.10 | chr5_175527975_+ | 2299 | -1411.90 | -1412.70 | -1432.60 |
| ADediting_1188969 | ENST00000321442.10 | chr5_175527999_+ | 2323 | -1412.40 | -1412.70 | -1432.60 |
| ADediting_1188970 | ENST00000321442.10 | chr5_175528000_+ | 2324 | -1412.40 | -1412.70 | -1432.60 |
| ADediting_1188971 | ENST00000321442.10 | chr5_175528019_+ | 2343 | -1412.20 | -1412.70 | -1432.60 |
| ADediting_1188972 | ENST00000321442.10 | chr5_175528037_+ | 2361 | -1412.00 | -1412.70 | -1432.60 |
| ADediting_1188973 | ENST00000321442.10 | chr5_175528050_+ | 2374 | -1412.30 | -1412.70 | -1432.60 |
| ADediting_1188974 | ENST00000321442.10 | chr5_175528060_+ | 2384 | -1412.40 | -1412.70 | -1432.60 |
| ADediting_1188975 | ENST00000321442.10 | chr5_175528062_+ | 2386 | -1412.70 | -1412.70 | -1432.60 |
| ADediting_1188976 | ENST00000321442.10 | chr5_175528086_+ | 2410 | -1412.80 | -1412.70 | -1432.60 |
| ADediting_1188977 | ENST00000321442.10 | chr5_175528087_+ | 2411 | -1412.70 | -1412.70 | -1432.60 |
| ADediting_1188978 | ENST00000321442.10 | chr5_175528097_+ | 2421 | -1412.70 | -1412.70 | -1432.60 |
| ADediting_1188979 | ENST00000321442.10 | chr5_175528103_+ | 2427 | -1412.40 | -1412.70 | -1432.60 |
| ADediting_1188980 | ENST00000321442.10 | chr5_175528169_+ | 2493 | -1412.40 | -1412.70 | -1432.60 |
| ADediting_1188981 | ENST00000321442.10 | chr5_175528170_+ | 2494 | -1412.30 | -1412.70 | -1432.60 |
| ADediting_1188982 | ENST00000321442.10 | chr5_175528183_+ | 2507 | -1412.70 | -1412.70 | -1432.60 |
| ADediting_1188983 | ENST00000321442.10 | chr5_175528185_+ | 2509 | -1412.00 | -1412.70 | -1432.60 |
| ADediting_1188984 | ENST00000321442.10 | chr5_175528186_+ | 2510 | -1419.30 | -1412.70 | -1432.60 |
| ADediting_1188985 | ENST00000321442.10 | chr5_175529081_+ | 3405 | -1412.80 | -1412.70 | -1432.60 |
| ADediting_1188986 | ENST00000321442.10 | chr5_175529082_+ | 3406 | -1412.70 | -1412.70 | -1432.60 |
| ADediting_1188987 | ENST00000321442.10 | chr5_175529087_+ | 3411 | -1412.00 | -1412.70 | -1432.60 |
| ADediting_1188988 | ENST00000321442.10 | chr5_175529090_+ | 3414 | -1412.30 | -1412.70 | -1432.60 |
| ADediting_1188989 | ENST00000321442.10 | chr5_175529098_+ | 3422 | -1411.80 | -1412.70 | -1432.60 |
| ADediting_1188990 | ENST00000321442.10 | chr5_175529127_+ | 3451 | -1412.00 | -1412.70 | -1432.60 |
| ADediting_1188991 | ENST00000321442.10 | chr5_175529160_+ | 3484 | -1412.80 | -1412.70 | -1432.60 |
| ADediting_1188992 | ENST00000321442.10 | chr5_175529161_+ | 3485 | -1412.70 | -1412.70 | -1432.60 |
| ADediting_1188993 | ENST00000321442.10 | chr5_175529172_+ | 3496 | -1412.70 | -1412.70 | -1432.60 |
| ADediting_1188994 | ENST00000321442.10 | chr5_175529175_+ | 3499 | -1412.80 | -1412.70 | -1432.60 |
| ADediting_1188995 | ENST00000321442.10 | chr5_175529176_+ | 3500 | -1412.80 | -1412.70 | -1432.60 |
| ADediting_1188996 | ENST00000321442.10 | chr5_175529177_+ | 3501 | -1412.80 | -1412.70 | -1432.60 |
| ADediting_1188997 | ENST00000321442.10 | chr5_175529178_+ | 3502 | -1412.80 | -1412.70 | -1432.60 |
| ADediting_1188998 | ENST00000321442.10 | chr5_175529179_+ | 3503 | -1412.70 | -1412.70 | -1432.60 |
| ADediting_1188999 | ENST00000321442.10 | chr5_175529181_+ | 3505 | -1412.70 | -1412.70 | -1432.60 |
| ADediting_1189000 | ENST00000321442.10 | chr5_175529183_+ | 3507 | -1412.40 | -1412.70 | -1432.60 |
| ADediting_1189001 | ENST00000321442.10 | chr5_175529184_+ | 3508 | -1412.80 | -1412.70 | -1432.60 |
| ADediting_1189002 | ENST00000321442.10 | chr5_175529185_+ | 3509 | -1412.80 | -1412.70 | -1432.60 |
| ADediting_1189003 | ENST00000321442.10 | chr5_175529187_+ | 3511 | -1412.80 | -1412.70 | -1432.60 |
| ADediting_1189004 | ENST00000321442.10 | chr5_175529188_+ | 3512 | -1412.70 | -1412.70 | -1432.60 |
| ADediting_1189005 | ENST00000321442.10 | chr5_175529191_+ | 3515 | -1412.40 | -1412.70 | -1432.60 |
| ADediting_1189006 | ENST00000321442.10 | chr5_175529195_+ | 3519 | -1418.90 | -1412.70 | -1432.60 |
| ADediting_1189007 | ENST00000321442.10 | chr5_175529199_+ | 3523 | -1418.50 | -1412.70 | -1432.60 |
| ADediting_1189008 | ENST00000321442.10 | chr5_175529215_+ | 3539 | -1418.90 | -1412.70 | -1432.60 |
| ADediting_1189009 | ENST00000321442.10 | chr5_175529217_+ | 3541 | -1412.40 | -1412.70 | -1432.60 |
| ADediting_1189010 | ENST00000321442.10 | chr5_175529218_+ | 3542 | -1418.90 | -1412.70 | -1432.60 |
| ADediting_1189011 | ENST00000321442.10 | chr5_175529223_+ | 3547 | -1412.00 | -1412.70 | -1432.60 |
| ADediting_1189012 | ENST00000321442.10 | chr5_175529227_+ | 3551 | -1412.70 | -1412.70 | -1432.60 |
| ADediting_1189013 | ENST00000321442.10 | chr5_175529240_+ | 3564 | -1411.80 | -1412.70 | -1432.60 |
| ADediting_1189014 | ENST00000321442.10 | chr5_175529244_+ | 3568 | -1411.40 | -1412.70 | -1432.60 |
| ADediting_1189015 | ENST00000321442.10 | chr5_175529247_+ | 3571 | -1411.80 | -1412.70 | -1432.60 |
| ADediting_1189016 | ENST00000321442.10 | chr5_175529250_+ | 3574 | -1410.20 | -1412.70 | -1432.60 |
| ADediting_1189017 | ENST00000321442.10 | chr5_175529258_+ | 3582 | -1412.20 | -1412.70 | -1432.60 |
| ADediting_1189018 | ENST00000321442.10 | chr5_175529259_+ | 3583 | -1409.70 | -1412.70 | -1432.60 |
| ADediting_1189019 | ENST00000321442.10 | chr5_175529266_+ | 3590 | -1412.80 | -1412.70 | -1432.60 |
| ADediting_1189020 | ENST00000321442.10 | chr5_175529279_+ | 3603 | -1412.00 | -1412.70 | -1432.60 |
| ADediting_1189021 | ENST00000321442.10 | chr5_175529283_+ | 3607 | -1411.80 | -1412.70 | -1432.60 |
| ADediting_1189022 | ENST00000321442.10 | chr5_175529287_+ | 3611 | -1418.70 | -1412.70 | -1432.60 |
| ADediting_1189023 | ENST00000321442.10 | chr5_175529288_+ | 3612 | -1412.60 | -1412.70 | -1432.60 |
| ADediting_1189024 | ENST00000321442.10 | chr5_175529295_+ | 3619 | -1418.10 | -1412.70 | -1432.60 |
| ADediting_1189025 | ENST00000321442.10 | chr5_175529303_+ | 3627 | -1412.30 | -1412.70 | -1432.60 |
| ADediting_1189026 | ENST00000321442.10 | chr5_175529323_+ | 3647 | -1411.80 | -1412.70 | -1432.60 |
| ADediting_1189027 | ENST00000321442.10 | chr5_175529327_+ | 3651 | -1411.80 | -1412.70 | -1432.60 |
| ADediting_1189028 | ENST00000321442.10 | chr5_175529328_+ | 3652 | -1419.10 | -1412.70 | -1432.60 |
| ADediting_1189029 | ENST00000321442.10 | chr5_175529329_+ | 3653 | -1413.00 | -1412.70 | -1432.60 |
| ADediting_1189030 | ENST00000321442.10 | chr5_175529334_+ | 3658 | -1418.50 | -1412.70 | -1432.60 |
RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for SFXN1 |
Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1188853 | chr5_175495606_+ | 0.408029534618458 | 0.0471555925334521 | 0.39729651808062 | -0.0482425525979406 | 2.22799952825515e-13 | 0.400606075403554 |
| DLPFC | ADediting_1188855 | chr5_175495964_+ | 0.708663181418342 | -0.0213056726301115 | 0.182275872900926 | -0.0759509926159422 | 3.00688269880513e-09 | 0.328787477151741 |
| DLPFC | ADediting_1188857 | chr5_175496001_+ | 0.901102249577274 | 0.00708654724913022 | 0.169697479957037 | -0.078187602848063 | 1.73542850941625e-12 | 0.386535841053777 |
| DLPFC | ADediting_1188865 | chr5_175496254_+ | 0.336030262704346 | 0.0548204775983344 | 0.202220012217521 | -0.0726271665881065 | 4.7856388621119e-20 | 0.489072728721092 |
| DLPFC | ADediting_1188866 | chr5_175496280_+ | 0.25276130456027 | 0.0651501433852629 | 0.437252785074552 | -0.0442788158708239 | 5.45712387128227e-20 | 0.488415459700516 |
| DLPFC | ADediting_1188868 | chr5_175496940_+ | 0.6985735084046 | 0.0220806587827111 | 0.266501603330795 | -0.0633017789678183 | 2.47581737282051e-12 | 0.384030888853984 |
| DLPFC | ADediting_1188878 | chr5_175497070_+ | 0.597956930006557 | 0.0300656320231258 | 0.379754715933714 | -0.0500577716043393 | 1.02247437291112e-10 | 0.356420822592987 |
| DLPFC | ADediting_1188879 | chr5_175497073_+ | 0.171298758735742 | 0.0778961694920388 | 0.767253569252774 | -0.0168769047487635 | 1.54652045050803e-18 | 0.471179247175165 |
| DLPFC | ADediting_1188880 | chr5_175497074_+ | 0.485152331678726 | 0.0397910357031026 | 0.458101211937255 | -0.042293462905014 | 7.74182993660424e-15 | 0.422291771396297 |
| DLPFC | ADediting_1188884 | chr5_175497124_+ | 0.627353234737165 | 0.0276785539865543 | 0.522523289483839 | -0.0364541176245997 | 7.46980747471171e-09 | 0.320858223147214 |
| DLPFC | ADediting_1188887 | chr5_175497667_+ | 0.346875861729771 | 0.0536043864957503 | 0.766325258347449 | -0.0169462213417228 | 1.54459324618548e-12 | 0.387352497913996 |
| DLPFC | ADediting_1188918 | chr5_175504388_+ | 0.505786360508282 | -0.0379325540991301 | 0.0379751051373278 | -0.117923945941239 | 5.31598297995875e-11 | 0.361469140590574 |
| DLPFC | ADediting_1188919 | chr5_175504389_+ | 0.652868599544949 | -0.0256452236781598 | 0.0943675397653856 | -0.0951771066473351 | 4.94249675687620e-11 | 0.362025930296782 |
| DLPFC | ADediting_1188927 | chr5_175504469_+ | 0.507702554412102 | -0.0377620146882905 | 0.0110600392155552 | -0.144135500013583 | 2.76961119730683e-10 | 0.348554426794852 |
| DLPFC | ADediting_1188930 | chr5_175504935_+ | 0.800530392109563 | 0.0144076239044019 | 0.232000598870999 | -0.0680802460825205 | 7.34262163153239e-17 | 0.449992432309803 |
| CER | ADediting_1188970 | chr5_175528000_+ | 0.003904568731306 | 0.234293420503526 | 1.9513817924978e-08 | 0.438766660596581 | 0.00896102361171372 | 0.212725819956502 |
| CER | ADediting_1188972 | chr5_175528037_+ | 0.0238633288846452 | 0.184430327230844 | 1.21652867317148e-07 | 0.415765845833003 | 0.0625359490019992 | 0.152455738390833 |
| TCX | ADediting_1188972 | chr5_175528037_+ | 0.0829471118711299 | 0.142036696902843 | 6.46581963805212e-05 | 0.32024678088216 | 0.208786706308672 | -0.103215272781247 |
| CER | ADediting_1188978 | chr5_175528097_+ | 0.00533355294241999 | 0.226421477068614 | 8.28926999793042e-07 | 0.389644229263888 | 0.0201788394764496 | 0.189535582625036 |
| CER | ADediting_1188979 | chr5_175528103_+ | 0.151189638484277 | 0.117772144719275 | 1.29980155982929e-05 | 0.347738093521574 | 0.0205015019939395 | 0.189057722715687 |
| CER | ADediting_1188982 | chr5_175528183_+ | 0.000131998878435975 | 0.307113837958755 | 8.46312884787171e-08 | 0.420464730557692 | 2.8769489880752e-05 | 0.334449683309281 |
| CER | ADediting_1188984 | chr5_175528186_+ | 3.56753103675147e-06 | 0.368155964159087 | 1.44375894174189e-08 | 0.442394710716237 | 0.000155311654460113 | 0.304033079217737 |
| CER | ADediting_1188985 | chr5_175529081_+ | 0.477068895943802 | 0.0584945259801662 | 0.107617375063567 | 0.131902673251174 | 2.93422236086161e-05 | 0.334112151171459 |
| CER | ADediting_1188986 | chr5_175529082_+ | 0.0546879096691403 | 0.157215547636527 | 9.11349325795859e-05 | 0.314007049987693 | 3.30192429054015e-07 | 0.40245241593858 |
| CER | ADediting_1188989 | chr5_175529098_+ | 0.00094772670514835 | 0.267211605004703 | 4.00679503695998e-08 | 0.42992730793381 | 0.0164153957671974 | 0.195661366448344 |
| CER | ADediting_1188993 | chr5_175529172_+ | 0.00135698836680026 | 0.259258093831266 | 1.4888218805202e-05 | 0.345509685972917 | 0.164833967358386 | 0.113994617359831 |
| CER | ADediting_1188999 | chr5_175529181_+ | 0.0118229916342961 | 0.205069733394004 | 5.01531241617511e-06 | 0.362911634495715 | 0.213443862647161 | 0.102173181254207 |
| CER | ADediting_1189001 | chr5_175529184_+ | 0.000446879439880163 | 0.283129993706208 | 1.55036643916694e-05 | 0.344841575272797 | 0.0172192015177735 | 0.194257547780753 |
| CER | ADediting_1189005 | chr5_175529191_+ | 0.00506455861183305 | 0.227745462692003 | 1.51098059505695e-07 | 0.412924385877319 | 0.0575326619932417 | 0.155428918045213 |
| CER | ADediting_1189006 | chr5_175529195_+ | 0.0023967513933754 | 0.246128883646672 | 1.25729947611508e-06 | 0.383665170790458 | 0.118029386024041 | 0.128171700427285 |
| CER | ADediting_1189008 | chr5_175529215_+ | 0.000863785289090305 | 0.269227793429048 | 1.64588252056074e-08 | 0.44082212577165 | 9.43502787408882e-05 | 0.31336898632514 |
| CER | ADediting_1189009 | chr5_175529217_+ | 0.00238024137101449 | 0.2462925595143 | 1.22706331476534e-07 | 0.415653316193054 | 0.000253512529754101 | 0.294539618009331 |
| CER | ADediting_1189010 | chr5_175529218_+ | 1.27227527675116e-05 | 0.348087863303759 | 1.11216309303505e-08 | 0.445503007623679 | 0.00375814674694788 | 0.235240983623818 |
| CER | ADediting_1189016 | chr5_175529250_+ | 0.00692234195564281 | 0.219637754708063 | 7.22484923982384e-08 | 0.422491006212295 | 0.040552232434682 | 0.167443188716248 |
| CER | ADediting_1189022 | chr5_175529287_+ | 3.31485254160826e-05 | 0.332014828292005 | 3.5410861690047e-09 | 0.4587795520907 | 0.000352522699785289 | 0.287961986266907 |
| CER | ADediting_1189023 | chr5_175529288_+ | 0.0142859510446655 | 0.199692407484239 | 6.97994159938975e-05 | 0.318867683538229 | 0.289580718956989 | 0.087034281954633 |
| CER | ADediting_1189028 | chr5_175529328_+ | 0.000629521886465201 | 0.275991940405854 | 2.86505589213379e-08 | 0.4340795626241 | 0.00826043380439367 | 0.214927601321027 |
| CER | ADediting_1189029 | chr5_175529329_+ | 0.00433097605539074 | 0.231705352737258 | 4.58845340427719e-05 | 0.326348390571589 | 0.135740485619768 | 0.122373836223445 |
Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.61710914224496e-23 | 0.524489060584629 | 9.46181647324755e-11 | 0.357023991143546 | 2.23723287559759e-25 | 0.544968328250467 |
| AC | 3.27473616447524e-101 | 0.917380967683528 | 1.46186543061602e-65 | 0.832546157181614 | 1.67608752230408e-09 | 0.369428779766598 |
| PCC | 4.63368490748692e-76 | 0.914195782116931 | 1.44832948156556e-81 | 0.925393590986442 | 0.312072819986913 | 0.0735284684636844 |
| CER | 7.34499443404358e-60 | 0.914014431187365 | 7.79980937081837e-34 | 0.794227258161499 | 0.00786851134281998 | 0.216232522945751 |
| TCX | 2.09327584397387e-48 | 0.874690978610145 | 5.07002817940705e-33 | 0.788274387078004 | 0.623397476677518 | -0.0404150296052715 |
| FP | 1.8724011185359e-31 | 0.734525588446693 | 1.47517664219137e-40 | 0.797992593468405 | 0.26553615453392 | 0.0838968043941473 |
| IFG | 7.51745873247073e-08 | 0.850062421243254 | 6.74162082263634e-06 | 0.770072632937276 | 0.67243222057842 | 0.0889483186403059 |
| PG | 6.29364585599468e-68 | 0.899100178573031 | 3.80524177239308e-44 | 0.808031535552924 | 0.256077365752841 | -0.0836924104132736 |
| STG | 2.45508923830773e-27 | 0.873312358818724 | 5.10230424883341e-23 | 0.835384040746972 | 0.997815368786877 | 0.000303288340706376 |
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Relation with AD stages for SFXN1 |
Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1188970 | chr5_175528000_+ | 0.000608194798304147 | 0.32464892351946 |
| CER | ADediting_1188982 | chr5_175528183_+ | 7.72997627210963e-06 | 0.415574490047576 |
| CER | ADediting_1188984 | chr5_175528186_+ | 0.000106916343196302 | 0.364160337313035 |
| CER | ADediting_1188989 | chr5_175529098_+ | 0.000945612104839791 | 0.313720791169127 |
| CER | ADediting_1189008 | chr5_175529215_+ | 2.40502349090879e-05 | 0.39439806974693 |
| CER | ADediting_1189028 | chr5_175529328_+ | 0.000748536879803745 | 0.319558703949664 |
| TCX | ADediting_1188982 | chr5_175528183_+ | 6.49891633914254e-07 | 0.461227112993375 |
| TCX | ADediting_1188984 | chr5_175528186_+ | 0.000160176022779043 | 0.358614103629411 |
| IFG | ADediting_1188970 | chr5_175528000_+ | 0.0471953762791067 | 0.400616016427105 |
| IFG | ADediting_1189017 | chr5_175529258_+ | 0.0339799672179712 | 0.425455621384173 |
Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 8.82418378082592e-05 | 0.368222191582209 |
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RelatedDrugs for SFXN1 |
Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SFXN1 |
Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| SFXN1 | C0009402 | Colorectal Carcinoma | 1 | CTD_human |
| SFXN1 | C0009404 | Colorectal Neoplasms | 1 | CTD_human |
| SFXN1 | C0152013 | Adenocarcinoma of lung (disorder) | 1 | CTD_human |
| SFXN1 | C1527249 | Colorectal Cancer | 1 | CTD_human |