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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for SFXN1

check button Gene summary
Gene informationGene symbol

SFXN1

Gene ID

94081

Gene namesideroflexin 1
SynonymsSLC56A1|TCC
Cytomap

5q35.2

Type of geneprotein-coding
Descriptionsideroflexin-1tricarboxylate carrier protein
Modification date20200313
UniProtAcc

Q9H9B4,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
SFXN1

GO:0006730

one-carbon metabolic process

30442778

SFXN1

GO:0015825

L-serine transport

30442778

SFXN1

GO:0042942

D-serine transport

30442778


Top

RNA A-to-I events for SFXN1

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_1188850(175487309, +), ADediting_1188851(175493029, +), ADediting_1188852(175495582, +), ADediting_1188853(175495606, +), ADediting_1188854(175495686, +), ADediting_1188855(175495964, +), ADediting_1188856(175495994, +), ADediting_1188857(175496001, +), ADediting_1188858(175496005, +), ADediting_1188859(175496078, +), ADediting_1188860(175496118, +), ADediting_1188861(175496120, +), ADediting_1188862(175496133, +), ADediting_1188863(175496159, +), ADediting_1188864(175496174, +), ADediting_1188865(175496254, +), ADediting_1188866(175496280, +), ADediting_1188867(175496289, +), ADediting_1188868(175496940, +), ADediting_1188869(175496969, +), ADediting_1188870(175496989, +), ADediting_1188871(175496992, +), ADediting_1188872(175496993, +), ADediting_1188873(175497007, +), ADediting_1188874(175497015, +), ADediting_1188875(175497019, +), ADediting_1188876(175497029, +), ADediting_1188877(175497035, +), ADediting_1188878(175497070, +), ADediting_1188879(175497073, +), ADediting_1188880(175497074, +), ADediting_1188881(175497086, +), ADediting_1188882(175497098, +), ADediting_1188883(175497111, +), ADediting_1188884(175497124, +), ADediting_1188885(175497141, +), ADediting_1188886(175497151, +), ADediting_1188887(175497667, +), ADediting_1188888(175497719, +), ADediting_1188889(175497783, +), ADediting_1188890(175497803, +), ADediting_1188891(175497809, +), ADediting_1188892(175497815, +), ADediting_1188893(175497851, +), ADediting_1188894(175497855, +), ADediting_1188895(175498983, +), ADediting_1188896(175498999, +), ADediting_1188897(175499000, +), ADediting_1188898(175499031, +), ADediting_1188899(175499076, +), ADediting_1188900(175499108, +), ADediting_1188901(175499176, +), ADediting_1188902(175499180, +), ADediting_1188903(175501108, +), ADediting_1188904(175501162, +), ADediting_1188905(175501186, +), ADediting_1188906(175501202, +), ADediting_1188907(175501251, +), ADediting_1188908(175501259, +), ADediting_1188909(175501275, +), ADediting_1188910(175501345, +), ADediting_1188911(175503739, +), ADediting_1188912(175503754, +), ADediting_1188913(175503786, +), ADediting_1188914(175503797, +), ADediting_1188915(175503893, +), ADediting_1188916(175503948, +), ADediting_1188917(175504320, +), ADediting_1188918(175504388, +), ADediting_1188919(175504389, +), ADediting_1188920(175504398, +), ADediting_1188921(175504399, +), ADediting_1188922(175504417, +), ADediting_1188923(175504419, +), ADediting_1188924(175504422, +), ADediting_1188925(175504424, +), ADediting_1188926(175504428, +), ADediting_1188927(175504469, +), ADediting_1188928(175504487, +), ADediting_1188929(175504904, +), ADediting_1188930(175504935, +), ADediting_1188931(175505280, +), ADediting_1188932(175505288, +), ADediting_1188933(175505334, +), ADediting_1188934(175505348, +), ADediting_1188935(175505349, +), ADediting_1188936(175505359, +), ADediting_1188937(175505416, +), ADediting_1188938(175505881, +), ADediting_1188939(175505946, +), ADediting_1188940(175505989, +), ADediting_1188941(175506001, +), ADediting_1188942(175506038, +), ADediting_1188943(175506722, +), ADediting_1188944(175506725, +), ADediting_1188945(175506846, +), ADediting_1188946(175506866, +), ADediting_1188947(175507850, +), ADediting_1188948(175507852, +), ADediting_1188949(175508351, +), ADediting_1188950(175508681, +), ADediting_1188951(175508731, +), ADediting_1188952(175508741, +), ADediting_1188953(175508755, +), ADediting_1188954(175508779, +), ADediting_1188955(175508878, +), ADediting_1188956(175508897, +), ADediting_1188957(175508909, +), ADediting_1188958(175508917, +), ADediting_1188959(175513039, +), ADediting_1188960(175513124, +), ADediting_1188961(175513125, +), ADediting_1188962(175513136, +), ADediting_1188963(175513179, +), ADediting_1188964(175513180, +), ADediting_1188965(175515129, +), ADediting_1188966(175515134, +), ADediting_1188967(175527959, +), ADediting_1188968(175527975, +), ADediting_1188969(175527999, +), ADediting_1188970(175528000, +), ADediting_1188971(175528019, +), ADediting_1188972(175528037, +), ADediting_1188973(175528050, +), ADediting_1188974(175528060, +), ADediting_1188975(175528062, +), ADediting_1188976(175528086, +), ADediting_1188977(175528087, +), ADediting_1188978(175528097, +), ADediting_1188979(175528103, +), ADediting_1188980(175528169, +), ADediting_1188981(175528170, +), ADediting_1188982(175528183, +), ADediting_1188983(175528185, +), ADediting_1188984(175528186, +), ADediting_1188985(175529081, +), ADediting_1188986(175529082, +), ADediting_1188987(175529087, +), ADediting_1188988(175529090, +), ADediting_1188989(175529098, +), ADediting_1188990(175529127, +), ADediting_1188991(175529160, +), ADediting_1188992(175529161, +), ADediting_1188993(175529172, +), ADediting_1188994(175529175, +), ADediting_1188995(175529176, +), ADediting_1188996(175529177, +), ADediting_1188997(175529178, +), ADediting_1188998(175529179, +), ADediting_1188999(175529181, +), ADediting_1189000(175529183, +), ADediting_1189001(175529184, +), ADediting_1189002(175529185, +), ADediting_1189003(175529187, +), ADediting_1189004(175529188, +), ADediting_1189005(175529191, +), ADediting_1189006(175529195, +), ADediting_1189007(175529199, +), ADediting_1189008(175529215, +), ADediting_1189009(175529217, +), ADediting_1189010(175529218, +), ADediting_1189011(175529223, +), ADediting_1189012(175529227, +), ADediting_1189013(175529240, +), ADediting_1189014(175529244, +), ADediting_1189015(175529247, +), ADediting_1189016(175529250, +), ADediting_1189017(175529258, +), ADediting_1189018(175529259, +), ADediting_1189019(175529266, +), ADediting_1189020(175529279, +), ADediting_1189021(175529283, +), ADediting_1189022(175529287, +), ADediting_1189023(175529288, +), ADediting_1189024(175529295, +), ADediting_1189025(175529303, +), ADediting_1189026(175529323, +), ADediting_1189027(175529327, +), ADediting_1189028(175529328, +), ADediting_1189029(175529329, +), ADediting_1189030(175529334, +), ADediting_1580766(175513029, +), ADediting_1580767(175513142, +), ADediting_1580768(175515038, +), ADediting_1580769(175515203, +), ADediting_1580770(175524029, +), ADediting_1580771(175525640, +), ADediting_1580772(175525665, +), ADediting_1580773(175525678, +), ADediting_1656111(175495609, +),

Top

RNA editing positional annotations for SFXN1 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_1188850chr5_175487309_+intronic
ADediting_1188851chr5_175493029_+intronic
ADediting_1188852chr5_175495582_+intronic
ADediting_1188853chr5_175495606_+intronic
ADediting_1188854chr5_175495686_+intronic
ADediting_1188855chr5_175495964_+intronic
ADediting_1188856chr5_175495994_+intronic
ADediting_1188857chr5_175496001_+intronic
ADediting_1188858chr5_175496005_+intronic
ADediting_1188859chr5_175496078_+intronic
ADediting_1188860chr5_175496118_+intronic
ADediting_1188861chr5_175496120_+intronic
ADediting_1188862chr5_175496133_+intronic
ADediting_1188863chr5_175496159_+intronic
ADediting_1188864chr5_175496174_+intronic
ADediting_1188865chr5_175496254_+intronic
ADediting_1188866chr5_175496280_+intronic
ADediting_1188867chr5_175496289_+intronic
ADediting_1188868chr5_175496940_+intronic
ADediting_1188869chr5_175496969_+intronic
ADediting_1188870chr5_175496989_+intronic
ADediting_1188871chr5_175496992_+intronic
ADediting_1188872chr5_175496993_+intronic
ADediting_1188873chr5_175497007_+intronic
ADediting_1188874chr5_175497015_+intronic
ADediting_1188875chr5_175497019_+intronic
ADediting_1188876chr5_175497029_+intronic
ADediting_1188877chr5_175497035_+intronic
ADediting_1188878chr5_175497070_+intronic
ADediting_1188879chr5_175497073_+intronic
ADediting_1188880chr5_175497074_+intronic
ADediting_1188881chr5_175497086_+intronic
ADediting_1188882chr5_175497098_+intronic
ADediting_1188883chr5_175497111_+intronic
ADediting_1188884chr5_175497124_+intronic
ADediting_1188885chr5_175497141_+intronic
ADediting_1188886chr5_175497151_+intronic
ADediting_1188887chr5_175497667_+intronic
ADediting_1188888chr5_175497719_+intronic
ADediting_1188889chr5_175497783_+intronic
ADediting_1188890chr5_175497803_+intronic
ADediting_1188891chr5_175497809_+intronic
ADediting_1188892chr5_175497815_+intronic
ADediting_1188893chr5_175497851_+intronic
ADediting_1188894chr5_175497855_+intronic
ADediting_1188895chr5_175498983_+intronic
ADediting_1188896chr5_175498999_+intronic
ADediting_1188897chr5_175499000_+intronic
ADediting_1188898chr5_175499031_+intronic
ADediting_1188899chr5_175499076_+intronic
ADediting_1188900chr5_175499108_+intronic
ADediting_1188901chr5_175499176_+intronic
ADediting_1188902chr5_175499180_+intronic
ADediting_1188903chr5_175501108_+intronic
ADediting_1188904chr5_175501162_+intronic
ADediting_1188905chr5_175501186_+intronic
ADediting_1188906chr5_175501202_+intronic
ADediting_1188907chr5_175501251_+intronic
ADediting_1188908chr5_175501259_+intronic
ADediting_1188909chr5_175501275_+intronic
ADediting_1188910chr5_175501345_+intronic
ADediting_1188911chr5_175503739_+intronic
ADediting_1188912chr5_175503754_+intronic
ADediting_1188913chr5_175503786_+intronic
ADediting_1188914chr5_175503797_+intronic
ADediting_1188915chr5_175503893_+intronic
ADediting_1188916chr5_175503948_+intronic
ADediting_1188917chr5_175504320_+intronic
ADediting_1188918chr5_175504388_+intronic
ADediting_1188919chr5_175504389_+intronic
ADediting_1188920chr5_175504398_+intronic
ADediting_1188921chr5_175504399_+intronic
ADediting_1188922chr5_175504417_+intronic
ADediting_1188923chr5_175504419_+intronic
ADediting_1188924chr5_175504422_+intronic
ADediting_1188925chr5_175504424_+intronic
ADediting_1188926chr5_175504428_+intronic
ADediting_1188927chr5_175504469_+intronic
ADediting_1188928chr5_175504487_+intronic
ADediting_1188929chr5_175504904_+intronic
ADediting_1188930chr5_175504935_+intronic
ADediting_1188931chr5_175505280_+intronic
ADediting_1188932chr5_175505288_+intronic
ADediting_1188933chr5_175505334_+intronic
ADediting_1188934chr5_175505348_+intronic
ADediting_1188935chr5_175505349_+intronic
ADediting_1188936chr5_175505359_+intronic
ADediting_1188937chr5_175505416_+intronic
ADediting_1188938chr5_175505881_+intronic
ADediting_1188939chr5_175505946_+intronic
ADediting_1188940chr5_175505989_+intronic
ADediting_1188941chr5_175506001_+intronic
ADediting_1188942chr5_175506038_+intronic
ADediting_1188943chr5_175506722_+intronic
ADediting_1188944chr5_175506725_+intronic
ADediting_1188945chr5_175506846_+intronic
ADediting_1188946chr5_175506866_+intronic
ADediting_1188947chr5_175507850_+intronic
ADediting_1188948chr5_175507852_+intronic
ADediting_1188949chr5_175508351_+intronic
ADediting_1188950chr5_175508681_+intronic
ADediting_1188951chr5_175508731_+intronic
ADediting_1188952chr5_175508741_+intronic
ADediting_1188953chr5_175508755_+intronic
ADediting_1188954chr5_175508779_+intronic
ADediting_1188955chr5_175508878_+intronic
ADediting_1188956chr5_175508897_+intronic
ADediting_1188957chr5_175508909_+intronic
ADediting_1188958chr5_175508917_+intronic
ADediting_1188959chr5_175513039_+intronic
ADediting_1188960chr5_175513124_+intronic
ADediting_1188961chr5_175513125_+intronic
ADediting_1188962chr5_175513136_+intronic
ADediting_1188963chr5_175513179_+intronic
ADediting_1188964chr5_175513180_+intronic
ADediting_1188965chr5_175515129_+intronic
ADediting_1188966chr5_175515134_+intronic
ADediting_1188967chr5_175527959_+UTR3
ADediting_1188968chr5_175527975_+UTR3
ADediting_1188969chr5_175527999_+UTR3
ADediting_1188970chr5_175528000_+UTR3
ADediting_1188971chr5_175528019_+UTR3
ADediting_1188972chr5_175528037_+UTR3
ADediting_1188973chr5_175528050_+UTR3
ADediting_1188974chr5_175528060_+UTR3
ADediting_1188975chr5_175528062_+UTR3
ADediting_1188976chr5_175528086_+UTR3
ADediting_1188977chr5_175528087_+UTR3
ADediting_1188978chr5_175528097_+UTR3
ADediting_1188979chr5_175528103_+UTR3
ADediting_1188980chr5_175528169_+UTR3
ADediting_1188981chr5_175528170_+UTR3
ADediting_1188982chr5_175528183_+UTR3
ADediting_1188983chr5_175528185_+UTR3
ADediting_1188984chr5_175528186_+UTR3
ADediting_1188985chr5_175529081_+UTR3
ADediting_1188986chr5_175529082_+UTR3
ADediting_1188987chr5_175529087_+UTR3
ADediting_1188988chr5_175529090_+UTR3
ADediting_1188989chr5_175529098_+UTR3
ADediting_1188990chr5_175529127_+UTR3
ADediting_1188991chr5_175529160_+UTR3
ADediting_1188992chr5_175529161_+UTR3
ADediting_1188993chr5_175529172_+UTR3
ADediting_1188994chr5_175529175_+UTR3
ADediting_1188995chr5_175529176_+UTR3
ADediting_1188996chr5_175529177_+UTR3
ADediting_1188997chr5_175529178_+UTR3
ADediting_1188998chr5_175529179_+UTR3
ADediting_1188999chr5_175529181_+UTR3
ADediting_1189000chr5_175529183_+UTR3
ADediting_1189001chr5_175529184_+UTR3
ADediting_1189002chr5_175529185_+UTR3
ADediting_1189003chr5_175529187_+UTR3
ADediting_1189004chr5_175529188_+UTR3
ADediting_1189005chr5_175529191_+UTR3
ADediting_1189006chr5_175529195_+UTR3
ADediting_1189007chr5_175529199_+UTR3
ADediting_1189008chr5_175529215_+UTR3
ADediting_1189009chr5_175529217_+UTR3
ADediting_1189010chr5_175529218_+UTR3
ADediting_1189011chr5_175529223_+UTR3
ADediting_1189012chr5_175529227_+UTR3
ADediting_1189013chr5_175529240_+UTR3
ADediting_1189014chr5_175529244_+UTR3
ADediting_1189015chr5_175529247_+UTR3
ADediting_1189016chr5_175529250_+UTR3
ADediting_1189017chr5_175529258_+UTR3
ADediting_1189018chr5_175529259_+UTR3
ADediting_1189019chr5_175529266_+UTR3
ADediting_1189020chr5_175529279_+UTR3
ADediting_1189021chr5_175529283_+UTR3
ADediting_1189022chr5_175529287_+UTR3
ADediting_1189023chr5_175529288_+UTR3
ADediting_1189024chr5_175529295_+UTR3
ADediting_1189025chr5_175529303_+UTR3
ADediting_1189026chr5_175529323_+UTR3
ADediting_1189027chr5_175529327_+UTR3
ADediting_1189028chr5_175529328_+UTR3
ADediting_1189029chr5_175529329_+UTR3
ADediting_1189030chr5_175529334_+UTR3
ADediting_1580766chr5_175513029_+intronic
ADediting_1580767chr5_175513142_+intronic
ADediting_1580768chr5_175515038_+intronic
ADediting_1580769chr5_175515203_+intronic
ADediting_1580770chr5_175524029_+UTR3
ADediting_1580771chr5_175525640_+intronic
ADediting_1580772chr5_175525665_+intronic
ADediting_1580773chr5_175525678_+intronic
ADediting_1656111chr5_175495609_+intronic

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_1188851chr5_175493029_+SINEAluName=AluY
ADediting_1188852chr5_175495582_+SINEAluName=AluSz
ADediting_1188853chr5_175495606_+SINEAluName=AluSz
ADediting_1188854chr5_175495686_+SINEAluName=AluSz
ADediting_1188855chr5_175495964_+SINEAluName=AluSp
ADediting_1188856chr5_175495994_+SINEAluName=AluSp
ADediting_1188857chr5_175496001_+SINEAluName=AluSp
ADediting_1188858chr5_175496005_+SINEAluName=AluSp
ADediting_1188859chr5_175496078_+SINEAluName=AluSp
ADediting_1188860chr5_175496118_+SINEAluName=AluSp
ADediting_1188861chr5_175496120_+SINEAluName=AluSp
ADediting_1188862chr5_175496133_+SINEAluName=AluSp
ADediting_1188863chr5_175496159_+SINEAluName=AluSp
ADediting_1188864chr5_175496174_+SINEAluName=AluSp
ADediting_1188865chr5_175496254_+SINEAluName=AluSx
ADediting_1188866chr5_175496280_+SINEAluName=AluSx
ADediting_1188867chr5_175496289_+SINEAluName=AluSx
ADediting_1188868chr5_175496940_+SINEAluName=AluSx1
ADediting_1188869chr5_175496969_+SINEAluName=AluSx1
ADediting_1188870chr5_175496989_+SINEAluName=AluSx1
ADediting_1188871chr5_175496992_+SINEAluName=AluSx1
ADediting_1188872chr5_175496993_+SINEAluName=AluSx1
ADediting_1188873chr5_175497007_+SINEAluName=AluSx1
ADediting_1188874chr5_175497015_+SINEAluName=AluSx1
ADediting_1188875chr5_175497019_+SINEAluName=AluSx1
ADediting_1188876chr5_175497029_+SINEAluName=AluSx1
ADediting_1188877chr5_175497035_+SINEAluName=AluSx1
ADediting_1188878chr5_175497070_+SINEAluName=AluSx1
ADediting_1188879chr5_175497073_+SINEAluName=AluSx1
ADediting_1188880chr5_175497074_+SINEAluName=AluSx1
ADediting_1188881chr5_175497086_+SINEAluName=AluSx1
ADediting_1188882chr5_175497098_+SINEAluName=AluSx1
ADediting_1188883chr5_175497111_+SINEAluName=AluSx1
ADediting_1188884chr5_175497124_+SINEAluName=AluSx1
ADediting_1188885chr5_175497141_+SINEAluName=AluSx1
ADediting_1188886chr5_175497151_+SINEAluName=AluSx1
ADediting_1188887chr5_175497667_+SINEAluName=AluSq2
ADediting_1188888chr5_175497719_+SINEAluName=AluSq2
ADediting_1188889chr5_175497783_+SINEAluName=AluSq2
ADediting_1188890chr5_175497803_+SINEAluName=AluSq2
ADediting_1188891chr5_175497809_+SINEAluName=AluSq2
ADediting_1188892chr5_175497815_+SINEAluName=AluSq2
ADediting_1188893chr5_175497851_+SINEAluName=AluSq2
ADediting_1188894chr5_175497855_+SINEAluName=AluSq2
ADediting_1188895chr5_175498983_+SINEAluName=AluSx
ADediting_1188896chr5_175498999_+SINEAluName=AluSx
ADediting_1188897chr5_175499000_+SINEAluName=AluSx
ADediting_1188898chr5_175499031_+SINEAluName=AluSx
ADediting_1188899chr5_175499076_+SINEAluName=AluSx
ADediting_1188900chr5_175499108_+SINEAluName=AluSx
ADediting_1188901chr5_175499176_+SINEAluName=AluSx
ADediting_1188902chr5_175499180_+SINEAluName=AluSx
ADediting_1188903chr5_175501108_+SINEAluName=AluSc8
ADediting_1188904chr5_175501162_+SINEAluName=AluSc8
ADediting_1188905chr5_175501186_+SINEAluName=AluSc8
ADediting_1188906chr5_175501202_+SINEAluName=AluSc8
ADediting_1188907chr5_175501251_+SINEAluName=AluSc8
ADediting_1188908chr5_175501259_+SINEAluName=AluSc8
ADediting_1188909chr5_175501275_+SINEAluName=AluSc8
ADediting_1188910chr5_175501345_+SINEAluName=AluSc8
ADediting_1188911chr5_175503739_+SINEAluName=AluSq2
ADediting_1188912chr5_175503754_+SINEAluName=AluSq2
ADediting_1188913chr5_175503786_+SINEAluName=AluSq2
ADediting_1188914chr5_175503797_+SINEAluName=AluSq2
ADediting_1188915chr5_175503893_+SINEAluName=AluSq2
ADediting_1188916chr5_175503948_+SINEAluName=AluSq2
ADediting_1188917chr5_175504320_+SINEAluName=AluSx
ADediting_1188918chr5_175504388_+SINEAluName=AluSx
ADediting_1188919chr5_175504389_+SINEAluName=AluSx
ADediting_1188920chr5_175504398_+SINEAluName=AluSx
ADediting_1188921chr5_175504399_+SINEAluName=AluSx
ADediting_1188922chr5_175504417_+SINEAluName=AluSx
ADediting_1188923chr5_175504419_+SINEAluName=AluSx
ADediting_1188924chr5_175504422_+SINEAluName=AluSx
ADediting_1188925chr5_175504424_+SINEAluName=AluSx
ADediting_1188926chr5_175504428_+SINEAluName=AluSx
ADediting_1188927chr5_175504469_+SINEAluName=AluSx
ADediting_1188928chr5_175504487_+SINEAluName=AluSx
ADediting_1188929chr5_175504904_+SINEAluName=AluY
ADediting_1188930chr5_175504935_+SINEAluName=AluY
ADediting_1188931chr5_175505280_+SINEAluName=AluSq2
ADediting_1188932chr5_175505288_+SINEAluName=AluSq2
ADediting_1188933chr5_175505334_+SINEAluName=AluSq2
ADediting_1188934chr5_175505348_+SINEAluName=AluSq2
ADediting_1188935chr5_175505349_+SINEAluName=AluSq2
ADediting_1188936chr5_175505359_+SINEAluName=AluSq2
ADediting_1188937chr5_175505416_+SINEAluName=AluSq2
ADediting_1188938chr5_175505881_+SINEAluName=AluSq
ADediting_1188939chr5_175505946_+SINEAluName=AluSq
ADediting_1188940chr5_175505989_+SINEAluName=AluSq
ADediting_1188941chr5_175506001_+SINEAluName=AluSq
ADediting_1188942chr5_175506038_+SINEAluName=AluSq
ADediting_1188943chr5_175506722_+SINEAluName=AluSg4
ADediting_1188944chr5_175506725_+SINEAluName=AluSg4
ADediting_1188945chr5_175506846_+SINEAluName=AluSg4
ADediting_1188946chr5_175506866_+SINEAluName=AluSg4
ADediting_1188947chr5_175507850_+SINEAluName=AluJo
ADediting_1188948chr5_175507852_+SINEAluName=AluJo
ADediting_1188949chr5_175508351_+SINEAluName=AluJb
ADediting_1188950chr5_175508681_+SINEAluName=AluSc
ADediting_1188951chr5_175508731_+SINEAluName=AluSc
ADediting_1188952chr5_175508741_+SINEAluName=AluSc
ADediting_1188953chr5_175508755_+SINEAluName=AluSc
ADediting_1188954chr5_175508779_+SINEAluName=AluSc
ADediting_1188955chr5_175508878_+SINEAluName=AluSc
ADediting_1188956chr5_175508897_+SINEAluName=AluSc
ADediting_1188957chr5_175508909_+SINEAluName=AluSc
ADediting_1188958chr5_175508917_+SINEAluName=AluSc
ADediting_1188959chr5_175513039_+SINEAluName=AluSx
ADediting_1188960chr5_175513124_+SINEAluName=AluSx
ADediting_1188961chr5_175513125_+SINEAluName=AluSx
ADediting_1188962chr5_175513136_+SINEAluName=AluSx
ADediting_1188963chr5_175513179_+SINEAluName=AluSx
ADediting_1188964chr5_175513180_+SINEAluName=AluSx
ADediting_1188965chr5_175515129_+SINEAluName=AluJo
ADediting_1188966chr5_175515134_+SINEAluName=AluJo
ADediting_1188967chr5_175527959_+SINEAluName=AluYc3
ADediting_1188968chr5_175527975_+SINEAluName=AluYc3
ADediting_1188969chr5_175527999_+SINEAluName=AluYc3
ADediting_1188970chr5_175528000_+SINEAluName=AluYc3
ADediting_1188971chr5_175528019_+SINEAluName=AluYc3
ADediting_1188972chr5_175528037_+SINEAluName=AluYc3
ADediting_1188973chr5_175528050_+SINEAluName=AluYc3
ADediting_1188974chr5_175528060_+SINEAluName=AluYc3
ADediting_1188975chr5_175528062_+SINEAluName=AluYc3
ADediting_1188976chr5_175528086_+SINEAluName=AluYc3
ADediting_1188977chr5_175528087_+SINEAluName=AluYc3
ADediting_1188978chr5_175528097_+SINEAluName=AluYc3
ADediting_1188979chr5_175528103_+SINEAluName=AluYc3
ADediting_1188980chr5_175528169_+SINEAluName=AluYc3
ADediting_1188981chr5_175528170_+SINEAluName=AluYc3
ADediting_1188982chr5_175528183_+SINEAluName=AluYc3
ADediting_1188983chr5_175528185_+SINEAluName=AluYc3
ADediting_1188984chr5_175528186_+SINEAluName=AluYc3
ADediting_1188985chr5_175529081_+SINEAluName=AluSp
ADediting_1188986chr5_175529082_+SINEAluName=AluSp
ADediting_1188987chr5_175529087_+SINEAluName=AluSp
ADediting_1188988chr5_175529090_+SINEAluName=AluSp
ADediting_1188989chr5_175529098_+SINEAluName=AluSp
ADediting_1188990chr5_175529127_+SINEAluName=AluSp
ADediting_1188991chr5_175529160_+SINEAluName=AluSp
ADediting_1188992chr5_175529161_+SINEAluName=AluSp
ADediting_1188993chr5_175529172_+SINEAluName=AluSp
ADediting_1188994chr5_175529175_+SINEAluName=AluSp
ADediting_1188995chr5_175529176_+SINEAluName=AluSp
ADediting_1188996chr5_175529177_+SINEAluName=AluSp
ADediting_1188997chr5_175529178_+SINEAluName=AluSp
ADediting_1188998chr5_175529179_+SINEAluName=AluSp
ADediting_1188999chr5_175529181_+SINEAluName=AluSp
ADediting_1189000chr5_175529183_+SINEAluName=AluSp
ADediting_1189001chr5_175529184_+SINEAluName=AluSp
ADediting_1189002chr5_175529185_+SINEAluName=AluSp
ADediting_1189003chr5_175529187_+SINEAluName=AluSp
ADediting_1189004chr5_175529188_+SINEAluName=AluSp
ADediting_1189005chr5_175529191_+SINEAluName=AluSp
ADediting_1189006chr5_175529195_+SINEAluName=AluSp
ADediting_1189007chr5_175529199_+SINEAluName=AluSp
ADediting_1189008chr5_175529215_+SINEAluName=AluSp
ADediting_1189009chr5_175529217_+SINEAluName=AluSp
ADediting_1189010chr5_175529218_+SINEAluName=AluSp
ADediting_1189011chr5_175529223_+SINEAluName=AluSp
ADediting_1189012chr5_175529227_+SINEAluName=AluSp
ADediting_1189013chr5_175529240_+SINEAluName=AluSp
ADediting_1189014chr5_175529244_+SINEAluName=AluSp
ADediting_1189015chr5_175529247_+SINEAluName=AluSp
ADediting_1189016chr5_175529250_+SINEAluName=AluSp
ADediting_1189017chr5_175529258_+SINEAluName=AluSp
ADediting_1189018chr5_175529259_+SINEAluName=AluSp
ADediting_1189019chr5_175529266_+SINEAluName=AluSp
ADediting_1189020chr5_175529279_+SINEAluName=AluSp
ADediting_1189021chr5_175529283_+SINEAluName=AluSp
ADediting_1189022chr5_175529287_+SINEAluName=AluSp
ADediting_1189023chr5_175529288_+SINEAluName=AluSp
ADediting_1189024chr5_175529295_+SINEAluName=AluSp
ADediting_1189025chr5_175529303_+SINEAluName=AluSp
ADediting_1189026chr5_175529323_+SINEAluName=AluSp
ADediting_1189027chr5_175529327_+SINEAluName=AluSp
ADediting_1189028chr5_175529328_+SINEAluName=AluSp
ADediting_1189029chr5_175529329_+SINEAluName=AluSp
ADediting_1189030chr5_175529334_+SINEAluName=AluSp
ADediting_1580766chr5_175513029_+SINEAluName=AluSx
ADediting_1580767chr5_175513142_+SINEAluName=AluSx
ADediting_1580768chr5_175515038_+SINEAluName=AluJo
ADediting_1580769chr5_175515203_+SINEAluName=AluJo
ADediting_1580770chr5_175524029_+SINEAluName=AluSx3
ADediting_1580771chr5_175525640_+SINEAluName=AluJr
ADediting_1580772chr5_175525665_+SINEAluName=AluJr
ADediting_1580773chr5_175525678_+SINEAluName=AluJr
ADediting_1656111chr5_175495609_+SINEAluName=AluSz

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RNA A-to-I editing events in the alternative splicing sites for SFXN1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SFXN1

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
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check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
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check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
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ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for SFXN1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
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The effects of the RNA editing to the miRNA binding sites for SFXN1

check buttonRNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
all structure

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1188967chr5_175527959_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4486chr51755279571755279637mer-m8175527948175527964145-18.64
ADediting_1188970chr5_175528000_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-17-3pchr51755279931755279997mer-m8175527977175528000152-20.36
ADediting_1188970chr5_175528000_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-596chr51755279961755280027mer-m8175527983175528003140-18.43
ADediting_1188971chr5_175528019_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4634chr51755280161755280227mer-m8175528008175528023149-34.84
ADediting_1188972chr5_175528037_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6089chr51755280351755280417mer-m8175528018175528042169-41.59
ADediting_1188973chr5_175528050_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6819-3pchr51755280461755280527mer-m8175528033175528053140-15.28
ADediting_1188973chr5_175528050_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6849-3pchr51755280481755280547mer-m8175528034175528055142-17.07
ADediting_1188973chr5_175528050_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6877-3pchr51755280461755280527mer-m8175528033175528053140-19.86
ADediting_1188974chr5_175528060_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-17-3pchr51755280561755280627mer-m8175528042175528063142-18.85
ADediting_1188976chr5_175528086_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-34a-3pchr51755280821755280887mer-m8175528068175528089140-8.62
ADediting_1188977chr5_175528087_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-548ae-3pchr51755280851755280917mer-m8175528072175528092141-6.23
ADediting_1188977chr5_175528087_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-548ah-3pchr51755280851755280917mer-m8175528070175528092143-6.87
ADediting_1188977chr5_175528087_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-548aj-3pchr51755280851755280917mer-m8175528072175528092141-7.13
ADediting_1188977chr5_175528087_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-548am-3pchr51755280851755280917mer-m8175528070175528092143-6.23
ADediting_1188977chr5_175528087_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-548aq-3pchr51755280851755280917mer-m8175528071175528092141-6.3
ADediting_1188977chr5_175528087_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-548j-3pchr51755280851755280917mer-m8175528072175528092141-6.23
ADediting_1188977chr5_175528087_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-548x-3pchr51755280851755280917mer-m8175528073175528092141-7.13
ADediting_1188977chr5_175528087_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-7844-5pchr51755280831755280897mer-m8175528069175528090164-22.52
ADediting_1188980chr5_175528169_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6771-5pchr51755281631755281697mer-m8175528149175528170159-34.04
ADediting_1188981chr5_175528170_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-3192-5pchr51755281631755281697mer-m8175528147175528170156-30.55
ADediting_1188981chr5_175528170_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-3620-3pchr51755281671755281737mer-m8175528153175528174140-15.58
ADediting_1188981chr5_175528170_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4292chr51755281651755281717mer-m8175528156175528172148-25.77
ADediting_1188981chr5_175528170_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6791-5pchr51755281651755281717mer-m8175528148175528172162-34.42
ADediting_1188982chr5_175528183_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4327chr51755281811755281877mer-m8175528170175528188140-12.38
ADediting_1188985chr5_175529081_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-513a-5pchr51755290751755290817mer-m8175529065175529082152-21.67
ADediting_1188985chr5_175529081_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-638chr51755290801755290867mer-1a175529062175529086151-34.49
ADediting_1188986chr5_175529082_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-8052chr51755290801755290867mer-1a175529068175529086143-28.36
ADediting_1188987chr5_175529087_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-371a-3pchr51755290851755290917mer-m8175529070175529092145-16.98
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-518a-3pchr51755290871755290937mer-m8175529073175529094145-16.17
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-518bchr51755290871755290937mer-m8175529072175529094147-20.81
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-518c-3pchr51755290871755290937mer-m8175529071175529094147-18.3
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-518d-3pchr51755290871755290937mer-m8175529074175529094145-17.84
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-518e-3pchr51755290861755290927mer-m8175529072175529093146-14.15
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-518f-3pchr51755290871755290937mer-m8175529074175529094145-16.5
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-526a-3pchr51755290871755290937mer-m8175529072175529094147-16.73
ADediting_1188989chr5_175529098_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-10392-3pchr51755290961755291038mer-1a175529079175529103144-22.69
ADediting_1188991chr5_175529160_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6895-3pchr51755291551755291617mer-m8175529141175529162158-20.36
ADediting_1188992chr5_175529161_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4508chr51755291591755291657mer-m8175529150175529166140-21.38
ADediting_1188992chr5_175529161_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6815-3pchr51755291561755291627mer-m8175529142175529163147-20.56
ADediting_1188993chr5_175529172_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-2467-3pchr51755291661755291727mer-m8175529152175529173155-22.62
ADediting_1188993chr5_175529172_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-374b-3pchr51755291691755291768mer-1a175529154175529176142-9.59
ADediting_1188994chr5_175529175_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-222-5pchr51755291691755291768mer-1a175529155175529176140-11.22
ADediting_1188994chr5_175529175_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-30a-3pchr51755291711755291788mer-1a175529158175529178145-10.28
ADediting_1188994chr5_175529175_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-30d-3pchr51755291711755291788mer-1a175529158175529178150-9.3
ADediting_1188994chr5_175529175_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-30e-3pchr51755291711755291788mer-1a175529158175529178145-10.38
ADediting_1188994chr5_175529175_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-936chr51755291681755291758mer-1a175529153175529175159-20.79
ADediting_1188995chr5_175529176_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-325chr51755291691755291768mer-1a175529154175529176145-11.62
ADediting_1188996chr5_175529177_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-630chr51755291751755291828mer-1a175529162175529182151-13.49
ADediting_1188999chr5_175529181_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-153-5pchr51755291741755291807mer-m8175529158175529181147-8.12
ADediting_1188999chr5_175529181_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-3680-3pchr51755291781755291858mer-1a175529163175529185140-15.09
ADediting_1189001chr5_175529184_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4742-3pchr51755291771755291848mer-1a175529162175529184142-9.18
ADediting_1189002chr5_175529185_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-578chr51755291801755291878mer-1a175529167175529187148-9.39
ADediting_1189002chr5_175529185_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-643chr51755291781755291858mer-1a175529163175529185147-13.72
ADediting_1189005chr5_175529191_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-3190-5pchr51755291891755291957mer-m8175529177175529196143-16.24
ADediting_1189005chr5_175529191_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-548schr51755291881755291947mer-m8175529173175529195140-11.19
ADediting_1189008chr5_175529215_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-10399-5pchr51755292121755292187mer-m8175529196175529219154-14.35
ADediting_1189008chr5_175529215_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6504-3pchr51755292121755292187mer-m8175529199175529219141-12.41
ADediting_1189008chr5_175529215_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-7151-3pchr51755292101755292178mer-1a175529201175529217142-15.49
ADediting_1189009chr5_175529217_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-638chr51755292161755292227mer-1a175529198175529222152-30.14
ADediting_1189010chr5_175529218_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-625-3pchr51755292121755292187mer-m8175529198175529219148-16.22
ADediting_1189010chr5_175529218_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-8052chr51755292161755292227mer-1a175529204175529222147-24.08
ADediting_1189012chr5_175529227_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-1207-3pchr51755292201755292267mer-m8175529210175529227140-12.56
ADediting_1189012chr5_175529227_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-646chr51755292221755292287mer-m8175529211175529229145-15.97
ADediting_1189013chr5_175529240_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6849-3pchr51755292331755292397mer-m8175529219175529240140-15.93
ADediting_1189014chr5_175529244_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-1224-3pchr51755292391755292468mer-1a175529227175529246156-26.03
ADediting_1189014chr5_175529244_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-1260achr51755292401755292467mer-m8175529230175529247164-28.81
ADediting_1189014chr5_175529244_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-1260bchr51755292401755292467mer-m8175529229175529247161-23.52
ADediting_1189014chr5_175529244_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4713-5pchr51755292421755292498mer-1a175529229175529249166-33.39
ADediting_1189014chr5_175529244_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-532-3pchr51755292411755292488mer-1a175529229175529248147-19.78
ADediting_1189015chr5_175529247_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-3162-3pchr51755292401755292467mer-m8175529228175529247157-26.24
ADediting_1189016chr5_175529250_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4431chr51755292461755292527mer-m8175529231175529253144-17.94
ADediting_1189017chr5_175529258_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-127-3pchr51755292561755292627mer-m8175529242175529263146-23.12
ADediting_1189019chr5_175529266_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-3943chr51755292621755292687mer-m8175529248175529269159-28.78
ADediting_1189019chr5_175529266_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6840-5pchr51755292601755292667mer-m8175529242175529267143-24.27
ADediting_1189021chr5_175529283_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-324-3pchr51755292761755292827mer-m8175529257175529283149-31.2
ADediting_1189022chr5_175529287_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4638-5pchr51755292821755292898mer-1a175529270175529289146-20.28
ADediting_1189023chr5_175529288_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-149-5pchr51755292811755292877mer-m8175529262175529288155-32.22
ADediting_1189024chr5_175529295_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4634chr51755292901755292978mer-1a175529277175529297147-19.33
ADediting_1189024chr5_175529295_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-652-3pchr51755292921755292987mer-m8175529278175529299154-18.13
ADediting_1189026chr5_175529323_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-1249-3pchr51755293191755293268mer-1a175529305175529326143-18.19
ADediting_1189026chr5_175529323_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6726-3pchr51755293201755293278mer-1a175529305175529327152-21.44
ADediting_1189026chr5_175529323_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6780b-3pchr51755293171755293237mer-m8175529304175529324145-15.11
ADediting_1189027chr5_175529327_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-572chr51755293211755293288mer-1a175529310175529328144-24.49
ADediting_1189028chr5_175529328_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4294chr51755293261755293338mer-1a175529317175529333140-15.25
ADediting_1189029chr5_175529329_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6874-5pchr51755293271755293337mer-m8175529312175529334140-14.42

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1188967chr5_175527959_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-1262chr51755279561755279627mer-m8175527942175527963140-15.41
ADediting_1188967chr5_175527959_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4701-3pchr51755279561755279627mer-m8175527943175527963153-22.36
ADediting_1188967chr5_175527959_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6736-5pchr51755279561755279627mer-m8175527943175527963143-20.47
ADediting_1188968chr5_175527975_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-324-3pchr51755279721755279787mer-m8175527957175527979148-24.16
ADediting_1188968chr5_175527975_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4252chr51755279731755279797mer-m8175527960175527980149-21.82
ADediting_1188969chr5_175527999_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4327chr51755279951755280017mer-m8175527980175528002151-22.19
ADediting_1188969chr5_175527999_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6516-5pchr51755279931755279997mer-m8175527981175528000144-15.29
ADediting_1188970chr5_175528000_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4327chr51755279951755280017mer-m8175527980175528002151-22.19
ADediting_1188970chr5_175528000_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6516-5pchr51755279931755279997mer-m8175527981175528000144-15.29
ADediting_1188972chr5_175528037_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4478chr51755280341755280407mer-m8175528026175528041149-25.05
ADediting_1188972chr5_175528037_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4649-3pchr51755280311755280377mer-m8175528018175528038140-14.11
ADediting_1188972chr5_175528037_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-485-5pchr51755280351755280417mer-m8175528021175528042153-20.53
ADediting_1188972chr5_175528037_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-7160-5pchr51755280321755280387mer-m8175528019175528039146-18.19
ADediting_1188974chr5_175528060_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-20b-3pchr51755280561755280627mer-m8175528042175528063151-18.98
ADediting_1188975chr5_175528062_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-20b-3pchr51755280561755280627mer-m8175528042175528063151-18.98
ADediting_1188975chr5_175528062_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6720-3pchr51755280601755280667mer-m8175528046175528067147-20.67
ADediting_1188980chr5_175528169_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-30b-3pchr51755281621755281698mer-1a175528148175528169147-16.29
ADediting_1188980chr5_175528169_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-3189-3pchr51755281651755281717mer-m8175528150175528172145-20.15
ADediting_1188980chr5_175528169_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-3689a-3pchr51755281621755281698mer-1a175528148175528169141-19.06
ADediting_1188980chr5_175528169_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-3689b-3pchr51755281621755281698mer-1a175528148175528169141-19.18
ADediting_1188980chr5_175528169_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-3689cchr51755281621755281698mer-1a175528148175528169141-19.18
ADediting_1188980chr5_175528169_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6779-5pchr51755281621755281698mer-1a175528146175528169143-26.09
ADediting_1188980chr5_175528169_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6813-3pchr51755281661755281727mer-m8175528153175528173140-15.63
ADediting_1188980chr5_175528169_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-887-5pchr51755281631755281697mer-m8175528150175528170147-18.54
ADediting_1188981chr5_175528170_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-3189-3pchr51755281651755281717mer-m8175528150175528172145-20.15
ADediting_1188981chr5_175528170_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6813-3pchr51755281661755281727mer-m8175528153175528173140-15.63
ADediting_1188981chr5_175528170_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-887-5pchr51755281631755281697mer-m8175528150175528170147-18.54
ADediting_1188985chr5_175529081_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-10399-5pchr51755290761755290827mer-m8175529063175529083140-9.6
ADediting_1188985chr5_175529081_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6504-3pchr51755290761755290827mer-m8175529062175529083145-14.35
ADediting_1188986chr5_175529082_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-10399-5pchr51755290761755290827mer-m8175529063175529083140-9.6
ADediting_1188986chr5_175529082_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-5089-5pchr51755290801755290867mer-m8175529065175529087148-14.09
ADediting_1188986chr5_175529082_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6504-3pchr51755290761755290827mer-m8175529062175529083145-14.35
ADediting_1188987chr5_175529087_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-5089-5pchr51755290801755290867mer-m8175529065175529087148-14.09
ADediting_1188987chr5_175529087_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6506-5pchr51755290811755290877mer-m8175529066175529088144-13.6
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-302a-3pchr51755290861755290927mer-m8175529072175529093142-11.02
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-302b-3pchr51755290861755290927mer-m8175529071175529093141-9.81
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-302c-3pchr51755290861755290927mer-m8175529073175529093145-14.35
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-302d-3pchr51755290861755290927mer-m8175529066175529093144-12.04
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-302echr51755290861755290927mer-m8175529077175529093141-8.62
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-372-3pchr51755290861755290927mer-m8175529073175529093153-13.9
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-519d-3pchr51755290871755290937mer-m8175529074175529094146-13.74
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-520a-3pchr51755290861755290927mer-m8175529072175529093140-10.31
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-520b-3pchr51755290861755290927mer-m8175529072175529093142-18.96
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-520c-3pchr51755290861755290927mer-m8175529071175529093147-18.96
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-520d-3pchr51755290861755290927mer-m8175529071175529093143-15.35
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-520e-3pchr51755290861755290927mer-m8175529073175529093140-15.57
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-520g-3pchr51755290881755290947mer-m8175529071175529095152-16.09
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-520hchr51755290881755290947mer-m8175529074175529095150-15.08
ADediting_1188988chr5_175529090_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-526b-3pchr51755290871755290937mer-m8175529072175529094147-15.22
ADediting_1188989chr5_175529098_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-150-5pchr51755290921755290987mer-m8175529078175529099140-15.8
ADediting_1188989chr5_175529098_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6778-3pchr51755290941755291007mer-m8175529081175529101143-13.97
ADediting_1188991chr5_175529160_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-193b-5pchr51755291581755291647mer-m8175529144175529165141-20.42
ADediting_1188992chr5_175529161_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-193b-5pchr51755291581755291647mer-m8175529144175529165141-20.42
ADediting_1188993chr5_175529172_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6866-5pchr51755291651755291717mer-m8175529150175529172147-13.79
ADediting_1189003chr5_175529187_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4735-5pchr51755291851755291917mer-m8175529171175529192140-4.28
ADediting_1189004chr5_175529188_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4735-5pchr51755291851755291917mer-m8175529171175529192140-4.28
ADediting_1189005chr5_175529191_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4735-5pchr51755291851755291917mer-m8175529171175529192140-4.28
ADediting_1189005chr5_175529191_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4794chr51755291891755291957mer-m8175529175175529196140-12.3
ADediting_1189005chr5_175529191_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-664a-5pchr51755291891755291957mer-m8175529173175529196141-13.4
ADediting_1189006chr5_175529195_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4794chr51755291891755291957mer-m8175529175175529196140-12.3
ADediting_1189006chr5_175529195_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-664a-5pchr51755291891755291957mer-m8175529173175529196141-13.4
ADediting_1189007chr5_175529199_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-5581-3pchr51755291961755292027mer-m8175529181175529203155-20.03
ADediting_1189007chr5_175529199_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6872-3pchr51755291951755292028mer-1a175529182175529202145-14.37
ADediting_1189010chr5_175529218_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-5089-5pchr51755292161755292227mer-m8175529204175529223142-12.75
ADediting_1189011chr5_175529223_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-5089-5pchr51755292161755292227mer-m8175529204175529223142-12.75
ADediting_1189011chr5_175529223_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6506-5pchr51755292171755292237mer-m8175529203175529224143-14.51
ADediting_1189013chr5_175529240_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4777-3pchr51755292371755292437mer-m8175529219175529244154-19.06
ADediting_1189014chr5_175529244_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4777-3pchr51755292371755292437mer-m8175529219175529244154-19.06
ADediting_1189017chr5_175529258_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-498-5pchr51755292521755292587mer-m8175529237175529259142-10.4
ADediting_1189018chr5_175529259_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-498-5pchr51755292521755292587mer-m8175529237175529259142-10.4
ADediting_1189019chr5_175529266_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4267chr51755292641755292718mer-1a175529256175529271140-18.69
ADediting_1189019chr5_175529266_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6736-3pchr51755292631755292697mer-m8175529250175529270141-14.81
ADediting_1189020chr5_175529279_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4772-3pchr51755292731755292797mer-m8175529261175529280152-16.85
ADediting_1189021chr5_175529283_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4284chr51755292791755292868mer-1a175529269175529286151-18.62
ADediting_1189024chr5_175529295_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-675-5pchr51755292911755292977mer-1a175529275175529297141-25.01
ADediting_1189025chr5_175529303_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-106a-3pchr51755292961755293027mer-m8175529281175529303144-11.01
ADediting_1189025chr5_175529303_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-122-5pchr51755293011755293077mer-1a175529289175529307143-24.82
ADediting_1189025chr5_175529303_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-130a-3pchr51755292981755293047mer-m8175529284175529305152-12.13
ADediting_1189025chr5_175529303_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-3666chr51755292981755293047mer-m8175529284175529305149-13.57
ADediting_1189025chr5_175529303_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4295chr51755292981755293047mer-m8175529288175529305152-12.01
ADediting_1189025chr5_175529303_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-504-3pchr51755293001755293078mer-1a175529287175529307151-20.88
ADediting_1189026chr5_175529323_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6812-3pchr51755293191755293268mer-1a175529306175529326140-18.1
ADediting_1189030chr5_175529334_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-4534chr51755293291755293357mer-m8175529320175529336140-15.43
ADediting_1189030chr5_175529334_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-6514-5pchr51755293281755293347mer-m8175529313175529335141-12.85
ADediting_1189030chr5_175529334_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-8082chr51755293291755293357mer-m8175529315175529336142-13.7

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1535951chr14_100874558_+ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-337-3pchr51755283531755283597mer-m8175528339175528360152-20.24

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_107020chr1_37500952_-ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-5581-3pchr51755291961755292027mer-m8175529181175529203155-20.03
ADediting_1337758chr7_5495892_-ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-589-5pchr51755268171755268237mer-m8175526803175526824145-12.44
ADediting_1556067chr19_40282625_-ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-641chr51755276201755276267mer-m8175527603175527627148-14.63
ADediting_1631458chr19_40282624_-ENSG00000164466.13ENST00000321442.10SFXN1-201hsa-miR-641chr51755276201755276267mer-m8175527603175527627148-14.63

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SFXN1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000321442.10protein_codingSoverviewSoverview

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
ADediting_1188967ENST00000321442.10chr5_175527959_+2283-1416.30-1412.70-1432.60
ADediting_1188968ENST00000321442.10chr5_175527975_+2299-1411.90-1412.70-1432.60
ADediting_1188969ENST00000321442.10chr5_175527999_+2323-1412.40-1412.70-1432.60
ADediting_1188970ENST00000321442.10chr5_175528000_+2324-1412.40-1412.70-1432.60
ADediting_1188971ENST00000321442.10chr5_175528019_+2343-1412.20-1412.70-1432.60
ADediting_1188972ENST00000321442.10chr5_175528037_+2361-1412.00-1412.70-1432.60
ADediting_1188973ENST00000321442.10chr5_175528050_+2374-1412.30-1412.70-1432.60
ADediting_1188974ENST00000321442.10chr5_175528060_+2384-1412.40-1412.70-1432.60
ADediting_1188975ENST00000321442.10chr5_175528062_+2386-1412.70-1412.70-1432.60
ADediting_1188976ENST00000321442.10chr5_175528086_+2410-1412.80-1412.70-1432.60
ADediting_1188977ENST00000321442.10chr5_175528087_+2411-1412.70-1412.70-1432.60
ADediting_1188978ENST00000321442.10chr5_175528097_+2421-1412.70-1412.70-1432.60
ADediting_1188979ENST00000321442.10chr5_175528103_+2427-1412.40-1412.70-1432.60
ADediting_1188980ENST00000321442.10chr5_175528169_+2493-1412.40-1412.70-1432.60
ADediting_1188981ENST00000321442.10chr5_175528170_+2494-1412.30-1412.70-1432.60
ADediting_1188982ENST00000321442.10chr5_175528183_+2507-1412.70-1412.70-1432.60
ADediting_1188983ENST00000321442.10chr5_175528185_+2509-1412.00-1412.70-1432.60
ADediting_1188984ENST00000321442.10chr5_175528186_+2510-1419.30-1412.70-1432.60
ADediting_1188985ENST00000321442.10chr5_175529081_+3405-1412.80-1412.70-1432.60
ADediting_1188986ENST00000321442.10chr5_175529082_+3406-1412.70-1412.70-1432.60
ADediting_1188987ENST00000321442.10chr5_175529087_+3411-1412.00-1412.70-1432.60
ADediting_1188988ENST00000321442.10chr5_175529090_+3414-1412.30-1412.70-1432.60
ADediting_1188989ENST00000321442.10chr5_175529098_+3422-1411.80-1412.70-1432.60
ADediting_1188990ENST00000321442.10chr5_175529127_+3451-1412.00-1412.70-1432.60
ADediting_1188991ENST00000321442.10chr5_175529160_+3484-1412.80-1412.70-1432.60
ADediting_1188992ENST00000321442.10chr5_175529161_+3485-1412.70-1412.70-1432.60
ADediting_1188993ENST00000321442.10chr5_175529172_+3496-1412.70-1412.70-1432.60
ADediting_1188994ENST00000321442.10chr5_175529175_+3499-1412.80-1412.70-1432.60
ADediting_1188995ENST00000321442.10chr5_175529176_+3500-1412.80-1412.70-1432.60
ADediting_1188996ENST00000321442.10chr5_175529177_+3501-1412.80-1412.70-1432.60
ADediting_1188997ENST00000321442.10chr5_175529178_+3502-1412.80-1412.70-1432.60
ADediting_1188998ENST00000321442.10chr5_175529179_+3503-1412.70-1412.70-1432.60
ADediting_1188999ENST00000321442.10chr5_175529181_+3505-1412.70-1412.70-1432.60
ADediting_1189000ENST00000321442.10chr5_175529183_+3507-1412.40-1412.70-1432.60
ADediting_1189001ENST00000321442.10chr5_175529184_+3508-1412.80-1412.70-1432.60
ADediting_1189002ENST00000321442.10chr5_175529185_+3509-1412.80-1412.70-1432.60
ADediting_1189003ENST00000321442.10chr5_175529187_+3511-1412.80-1412.70-1432.60
ADediting_1189004ENST00000321442.10chr5_175529188_+3512-1412.70-1412.70-1432.60
ADediting_1189005ENST00000321442.10chr5_175529191_+3515-1412.40-1412.70-1432.60
ADediting_1189006ENST00000321442.10chr5_175529195_+3519-1418.90-1412.70-1432.60
ADediting_1189007ENST00000321442.10chr5_175529199_+3523-1418.50-1412.70-1432.60
ADediting_1189008ENST00000321442.10chr5_175529215_+3539-1418.90-1412.70-1432.60
ADediting_1189009ENST00000321442.10chr5_175529217_+3541-1412.40-1412.70-1432.60
ADediting_1189010ENST00000321442.10chr5_175529218_+3542-1418.90-1412.70-1432.60
ADediting_1189011ENST00000321442.10chr5_175529223_+3547-1412.00-1412.70-1432.60
ADediting_1189012ENST00000321442.10chr5_175529227_+3551-1412.70-1412.70-1432.60
ADediting_1189013ENST00000321442.10chr5_175529240_+3564-1411.80-1412.70-1432.60
ADediting_1189014ENST00000321442.10chr5_175529244_+3568-1411.40-1412.70-1432.60
ADediting_1189015ENST00000321442.10chr5_175529247_+3571-1411.80-1412.70-1432.60
ADediting_1189016ENST00000321442.10chr5_175529250_+3574-1410.20-1412.70-1432.60
ADediting_1189017ENST00000321442.10chr5_175529258_+3582-1412.20-1412.70-1432.60
ADediting_1189018ENST00000321442.10chr5_175529259_+3583-1409.70-1412.70-1432.60
ADediting_1189019ENST00000321442.10chr5_175529266_+3590-1412.80-1412.70-1432.60
ADediting_1189020ENST00000321442.10chr5_175529279_+3603-1412.00-1412.70-1432.60
ADediting_1189021ENST00000321442.10chr5_175529283_+3607-1411.80-1412.70-1432.60
ADediting_1189022ENST00000321442.10chr5_175529287_+3611-1418.70-1412.70-1432.60
ADediting_1189023ENST00000321442.10chr5_175529288_+3612-1412.60-1412.70-1432.60
ADediting_1189024ENST00000321442.10chr5_175529295_+3619-1418.10-1412.70-1432.60
ADediting_1189025ENST00000321442.10chr5_175529303_+3627-1412.30-1412.70-1432.60
ADediting_1189026ENST00000321442.10chr5_175529323_+3647-1411.80-1412.70-1432.60
ADediting_1189027ENST00000321442.10chr5_175529327_+3651-1411.80-1412.70-1432.60
ADediting_1189028ENST00000321442.10chr5_175529328_+3652-1419.10-1412.70-1432.60
ADediting_1189029ENST00000321442.10chr5_175529329_+3653-1413.00-1412.70-1432.60
ADediting_1189030ENST00000321442.10chr5_175529334_+3658-1418.50-1412.70-1432.60

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for SFXN1

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFCADediting_1188853chr5_175495606_+0.4080295346184580.04715559253345210.39729651808062-0.04824255259794062.22799952825515e-130.400606075403554
DLPFCADediting_1188855chr5_175495964_+0.708663181418342-0.02130567263011150.182275872900926-0.07595099261594223.00688269880513e-090.328787477151741
DLPFCADediting_1188857chr5_175496001_+0.9011022495772740.007086547249130220.169697479957037-0.0781876028480631.73542850941625e-120.386535841053777
DLPFCADediting_1188865chr5_175496254_+0.3360302627043460.05482047759833440.202220012217521-0.07262716658810654.7856388621119e-200.489072728721092
DLPFCADediting_1188866chr5_175496280_+0.252761304560270.06515014338526290.437252785074552-0.04427881587082395.45712387128227e-200.488415459700516
DLPFCADediting_1188868chr5_175496940_+0.69857350840460.02208065878271110.266501603330795-0.06330177896781832.47581737282051e-120.384030888853984
DLPFCADediting_1188878chr5_175497070_+0.5979569300065570.03006563202312580.379754715933714-0.05005777160433931.02247437291112e-100.356420822592987
DLPFCADediting_1188879chr5_175497073_+0.1712987587357420.07789616949203880.767253569252774-0.01687690474876351.54652045050803e-180.471179247175165
DLPFCADediting_1188880chr5_175497074_+0.4851523316787260.03979103570310260.458101211937255-0.0422934629050147.74182993660424e-150.422291771396297
DLPFCADediting_1188884chr5_175497124_+0.6273532347371650.02767855398655430.522523289483839-0.03645411762459977.46980747471171e-090.320858223147214
DLPFCADediting_1188887chr5_175497667_+0.3468758617297710.05360438649575030.766325258347449-0.01694622134172281.54459324618548e-120.387352497913996
DLPFCADediting_1188918chr5_175504388_+0.505786360508282-0.03793255409913010.0379751051373278-0.1179239459412395.31598297995875e-110.361469140590574
DLPFCADediting_1188919chr5_175504389_+0.652868599544949-0.02564522367815980.0943675397653856-0.09517710664733514.94249675687620e-110.362025930296782
DLPFCADediting_1188927chr5_175504469_+0.507702554412102-0.03776201468829050.0110600392155552-0.1441355000135832.76961119730683e-100.348554426794852
DLPFCADediting_1188930chr5_175504935_+0.8005303921095630.01440762390440190.232000598870999-0.06808024608252057.34262163153239e-170.449992432309803
CERADediting_1188970chr5_175528000_+0.0039045687313060.2342934205035261.9513817924978e-080.4387666605965810.008961023611713720.212725819956502
CERADediting_1188972chr5_175528037_+0.02386332888464520.1844303272308441.21652867317148e-070.4157658458330030.06253594900199920.152455738390833
TCXADediting_1188972chr5_175528037_+0.08294711187112990.1420366969028436.46581963805212e-050.320246780882160.208786706308672-0.103215272781247
CERADediting_1188978chr5_175528097_+0.005333552942419990.2264214770686148.28926999793042e-070.3896442292638880.02017883947644960.189535582625036
CERADediting_1188979chr5_175528103_+0.1511896384842770.1177721447192751.29980155982929e-050.3477380935215740.02050150199393950.189057722715687
CERADediting_1188982chr5_175528183_+0.0001319988784359750.3071138379587558.46312884787171e-080.4204647305576922.8769489880752e-050.334449683309281
CERADediting_1188984chr5_175528186_+3.56753103675147e-060.3681559641590871.44375894174189e-080.4423947107162370.0001553116544601130.304033079217737
CERADediting_1188985chr5_175529081_+0.4770688959438020.05849452598016620.1076173750635670.1319026732511742.93422236086161e-050.334112151171459
CERADediting_1188986chr5_175529082_+0.05468790966914030.1572155476365279.11349325795859e-050.3140070499876933.30192429054015e-070.40245241593858
CERADediting_1188989chr5_175529098_+0.000947726705148350.2672116050047034.00679503695998e-080.429927307933810.01641539576719740.195661366448344
CERADediting_1188993chr5_175529172_+0.001356988366800260.2592580938312661.4888218805202e-050.3455096859729170.1648339673583860.113994617359831
CERADediting_1188999chr5_175529181_+0.01182299163429610.2050697333940045.01531241617511e-060.3629116344957150.2134438626471610.102173181254207
CERADediting_1189001chr5_175529184_+0.0004468794398801630.2831299937062081.55036643916694e-050.3448415752727970.01721920151777350.194257547780753
CERADediting_1189005chr5_175529191_+0.005064558611833050.2277454626920031.51098059505695e-070.4129243858773190.05753266199324170.155428918045213
CERADediting_1189006chr5_175529195_+0.00239675139337540.2461288836466721.25729947611508e-060.3836651707904580.1180293860240410.128171700427285
CERADediting_1189008chr5_175529215_+0.0008637852890903050.2692277934290481.64588252056074e-080.440822125771659.43502787408882e-050.31336898632514
CERADediting_1189009chr5_175529217_+0.002380241371014490.24629255951431.22706331476534e-070.4156533161930540.0002535125297541010.294539618009331
CERADediting_1189010chr5_175529218_+1.27227527675116e-050.3480878633037591.11216309303505e-080.4455030076236790.003758146746947880.235240983623818
CERADediting_1189016chr5_175529250_+0.006922341955642810.2196377547080637.22484923982384e-080.4224910062122950.0405522324346820.167443188716248
CERADediting_1189022chr5_175529287_+3.31485254160826e-050.3320148282920053.5410861690047e-090.45877955209070.0003525226997852890.287961986266907
CERADediting_1189023chr5_175529288_+0.01428595104466550.1996924074842396.97994159938975e-050.3188676835382290.2895807189569890.087034281954633
CERADediting_1189028chr5_175529328_+0.0006295218864652010.2759919404058542.86505589213379e-080.43407956262410.008260433804393670.214927601321027
CERADediting_1189029chr5_175529329_+0.004330976055390740.2317053527372584.58845340427719e-050.3263483905715890.1357404856197680.122373836223445

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC2.61710914224496e-230.5244890605846299.46181647324755e-110.3570239911435462.23723287559759e-250.544968328250467
AC3.27473616447524e-1010.9173809676835281.46186543061602e-650.8325461571816141.67608752230408e-090.369428779766598
PCC4.63368490748692e-760.9141957821169311.44832948156556e-810.9253935909864420.3120728199869130.0735284684636844
CER7.34499443404358e-600.9140144311873657.79980937081837e-340.7942272581614990.007868511342819980.216232522945751
TCX2.09327584397387e-480.8746909786101455.07002817940705e-330.7882743870780040.623397476677518-0.0404150296052715
FP1.8724011185359e-310.7345255884466931.47517664219137e-400.7979925934684050.265536154533920.0838968043941473
IFG7.51745873247073e-080.8500624212432546.74162082263634e-060.7700726329372760.672432220578420.0889483186403059
PG6.29364585599468e-680.8991001785730313.80524177239308e-440.8080315355529240.256077365752841-0.0836924104132736
STG2.45508923830773e-270.8733123588187245.10230424883341e-230.8353840407469720.9978153687868770.000303288340706376

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Relation with AD stages for SFXN1

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.
CERADediting_1188970chr5_175528000_+0.0006081947983041470.32464892351946
CERADediting_1188982chr5_175528183_+7.72997627210963e-060.415574490047576
CERADediting_1188984chr5_175528186_+0.0001069163431963020.364160337313035
CERADediting_1188989chr5_175529098_+0.0009456121048397910.313720791169127
CERADediting_1189008chr5_175529215_+2.40502349090879e-050.39439806974693
CERADediting_1189028chr5_175529328_+0.0007485368798037450.319558703949664
TCXADediting_1188982chr5_175528183_+6.49891633914254e-070.461227112993375
TCXADediting_1188984chr5_175528186_+0.0001601760227790430.358614103629411
IFGADediting_1188970chr5_175528000_+0.04719537627910670.400616016427105
IFGADediting_1189017chr5_175529258_+0.03397996721797120.425455621384173

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.
CER8.82418378082592e-050.368222191582209

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RelatedDrugs for SFXN1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SFXN1

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource
SFXN1C0009402Colorectal Carcinoma1CTD_human
SFXN1C0009404Colorectal Neoplasms1CTD_human
SFXN1C0152013Adenocarcinoma of lung (disorder)1CTD_human
SFXN1C1527249Colorectal Cancer1CTD_human