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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for TADA2B |
 Gene summary |
| Gene information | Gene symbol | TADA2B | Gene ID | 93624 |
| Gene name | transcriptional adaptor 2B | |
| Synonyms | ADA2(beta)|ADA2B | |
| Cytomap | 4p16.1 | |
| Type of gene | protein-coding | |
| Description | transcriptional adapter 2-betaADA2-betaADA2-like protein betatranscriptional adaptor 2 (ADA2 homolog, yeast)-beta | |
| Modification date | 20200313 | |
| UniProtAcc | Q86TJ2, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for TADA2B |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_1143775(7057533, +), ADediting_1143776(7057534, +), ADediting_1143777(7057555, +), ADediting_1143778(7057556, +), ADediting_1143779(7057578, +), ADediting_1143780(7057601, +), ADediting_1143781(7057611, +), ADediting_1143782(7057622, +), ADediting_1143783(7057666, +), ADediting_1143784(7057672, +), ADediting_1143785(7057676, +), ADediting_1143786(7057696, +), ADediting_1143787(7057699, +), ADediting_1143788(7057708, +), ADediting_1143789(7057774, +), |
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RNA editing positional annotations for TADA2B using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1143775 | chr4_7057533_+ | UTR3 |
| ADediting_1143776 | chr4_7057534_+ | UTR3 |
| ADediting_1143777 | chr4_7057555_+ | UTR3 |
| ADediting_1143778 | chr4_7057556_+ | UTR3 |
| ADediting_1143779 | chr4_7057578_+ | UTR3 |
| ADediting_1143780 | chr4_7057601_+ | UTR3 |
| ADediting_1143781 | chr4_7057611_+ | UTR3 |
| ADediting_1143782 | chr4_7057622_+ | UTR3 |
| ADediting_1143783 | chr4_7057666_+ | UTR3 |
| ADediting_1143784 | chr4_7057672_+ | UTR3 |
| ADediting_1143785 | chr4_7057676_+ | UTR3 |
| ADediting_1143786 | chr4_7057696_+ | UTR3 |
| ADediting_1143787 | chr4_7057699_+ | UTR3 |
| ADediting_1143788 | chr4_7057708_+ | UTR3 |
| ADediting_1143789 | chr4_7057774_+ | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1143775 | chr4_7057533_+ | SINE | Alu | Name=AluSc |
| ADediting_1143776 | chr4_7057534_+ | SINE | Alu | Name=AluSc |
| ADediting_1143777 | chr4_7057555_+ | SINE | Alu | Name=AluSc |
| ADediting_1143778 | chr4_7057556_+ | SINE | Alu | Name=AluSc |
| ADediting_1143779 | chr4_7057578_+ | SINE | Alu | Name=AluSc |
| ADediting_1143780 | chr4_7057601_+ | SINE | Alu | Name=AluSc |
| ADediting_1143781 | chr4_7057611_+ | SINE | Alu | Name=AluSc |
| ADediting_1143782 | chr4_7057622_+ | SINE | Alu | Name=AluSc |
| ADediting_1143783 | chr4_7057666_+ | SINE | Alu | Name=AluSc |
| ADediting_1143784 | chr4_7057672_+ | SINE | Alu | Name=AluSc |
| ADediting_1143785 | chr4_7057676_+ | SINE | Alu | Name=AluSc |
| ADediting_1143786 | chr4_7057696_+ | SINE | Alu | Name=AluSc |
| ADediting_1143787 | chr4_7057699_+ | SINE | Alu | Name=AluSc |
| ADediting_1143788 | chr4_7057708_+ | SINE | Alu | Name=AluSc |
| ADediting_1143789 | chr4_7057774_+ | SINE | Alu | Name=AluSc |
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RNA A-to-I editing events in the alternative splicing sites for TADA2B |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TADA2B |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for TADA2B |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for TADA2B |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1143775 | chr4_7057533_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-513a-5p | chr4 | 7057527 | 7057533 | 7mer-m8 | 7057517 | 7057534 | 144 | -16.68 |
| ADediting_1143775 | chr4_7057533_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-638 | chr4 | 7057532 | 7057538 | 7mer-1a | 7057514 | 7057538 | 157 | -32.92 |
| ADediting_1143776 | chr4_7057534_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-8052 | chr4 | 7057532 | 7057538 | 7mer-1a | 7057520 | 7057538 | 140 | -24.15 |
| ADediting_1143778 | chr4_7057556_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-3176 | chr4 | 7057549 | 7057555 | 7mer-m8 | 7057538 | 7057556 | 140 | -15.24 |
| ADediting_1143778 | chr4_7057556_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-3922-3p | chr4 | 7057549 | 7057555 | 7mer-m8 | 7057535 | 7057556 | 141 | -19.73 |
| ADediting_1143779 | chr4_7057578_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-378a-5p | chr4 | 7057573 | 7057579 | 7mer-m8 | 7057558 | 7057580 | 151 | -21.91 |
| ADediting_1143780 | chr4_7057601_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-3190-5p | chr4 | 7057594 | 7057600 | 7mer-m8 | 7057582 | 7057601 | 150 | -18.87 |
| ADediting_1143781 | chr4_7057611_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-3158-3p | chr4 | 7057608 | 7057614 | 7mer-m8 | 7057595 | 7057615 | 150 | -20.06 |
| ADediting_1143781 | chr4_7057611_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-412-3p | chr4 | 7057604 | 7057610 | 7mer-m8 | 7057589 | 7057611 | 151 | -16.53 |
| ADediting_1143781 | chr4_7057611_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-6754-3p | chr4 | 7057604 | 7057610 | 7mer-m8 | 7057591 | 7057611 | 144 | -15.76 |
| ADediting_1143782 | chr4_7057622_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-374b-3p | chr4 | 7057619 | 7057626 | 8mer-1a | 7057601 | 7057626 | 146 | -14.59 |
| ADediting_1143783 | chr4_7057666_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-140-3p | chr4 | 7057661 | 7057667 | 7mer-m8 | 7057648 | 7057668 | 163 | -23.48 |
| ADediting_1143785 | chr4_7057676_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-1207-3p | chr4 | 7057669 | 7057675 | 7mer-m8 | 7057658 | 7057676 | 145 | -13.53 |
| ADediting_1143785 | chr4_7057676_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-646 | chr4 | 7057671 | 7057677 | 7mer-m8 | 7057659 | 7057678 | 148 | -22.3 |
| ADediting_1143786 | chr4_7057696_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-3162-3p | chr4 | 7057689 | 7057695 | 7mer-m8 | 7057677 | 7057696 | 157 | -26.45 |
| ADediting_1143788 | chr4_7057708_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-3155a | chr4 | 7057705 | 7057711 | 7mer-m8 | 7057691 | 7057712 | 149 | -24.05 |
| ADediting_1143788 | chr4_7057708_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-3155b | chr4 | 7057705 | 7057711 | 7mer-m8 | 7057694 | 7057712 | 149 | -22.89 |
| ADediting_1143788 | chr4_7057708_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-484 | chr4 | 7057705 | 7057711 | 7mer-m8 | 7057691 | 7057712 | 151 | -23.14 |
| ADediting_1143789 | chr4_7057774_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-6838-3p | chr4 | 7057771 | 7057777 | 7mer-m8 | 7057760 | 7057778 | 168 | -24.31 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1143775 | chr4_7057533_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-10399-5p | chr4 | 7057528 | 7057534 | 7mer-m8 | 7057514 | 7057535 | 144 | -10.39 |
| ADediting_1143775 | chr4_7057533_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-6504-3p | chr4 | 7057528 | 7057534 | 7mer-m8 | 7057514 | 7057535 | 152 | -15.11 |
| ADediting_1143775 | chr4_7057533_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-7151-3p | chr4 | 7057526 | 7057533 | 8mer-1a | 7057509 | 7057533 | 145 | -20.4 |
| ADediting_1143776 | chr4_7057534_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-10399-5p | chr4 | 7057528 | 7057534 | 7mer-m8 | 7057514 | 7057535 | 144 | -10.39 |
| ADediting_1143776 | chr4_7057534_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-5089-5p | chr4 | 7057532 | 7057538 | 7mer-m8 | 7057517 | 7057539 | 148 | -14.13 |
| ADediting_1143776 | chr4_7057534_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-6504-3p | chr4 | 7057528 | 7057534 | 7mer-m8 | 7057514 | 7057535 | 152 | -15.11 |
| ADediting_1143777 | chr4_7057555_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-6878-3p | chr4 | 7057548 | 7057555 | 8mer-1a | 7057535 | 7057555 | 142 | -14.14 |
| ADediting_1143780 | chr4_7057601_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-4716-5p | chr4 | 7057599 | 7057605 | 7mer-m8 | 7057585 | 7057606 | 140 | -11.3 |
| ADediting_1143780 | chr4_7057601_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-4781-3p | chr4 | 7057597 | 7057603 | 7mer-m8 | 7057583 | 7057604 | 140 | -14.54 |
| ADediting_1143781 | chr4_7057611_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-6823-5p | chr4 | 7057609 | 7057615 | 7mer-m8 | 7057596 | 7057616 | 143 | -17.07 |
| ADediting_1143782 | chr4_7057622_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-6832-5p | chr4 | 7057616 | 7057622 | 7mer-m8 | 7057601 | 7057623 | 140 | -18.87 |
| ADediting_1143783 | chr4_7057666_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-7151-3p | chr4 | 7057659 | 7057665 | 7mer-m8 | 7057645 | 7057666 | 143 | -18.9 |
| ADediting_1143783 | chr4_7057666_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-8052 | chr4 | 7057665 | 7057671 | 7mer-1a | 7057653 | 7057671 | 143 | -23.66 |
| ADediting_1143785 | chr4_7057676_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-562 | chr4 | 7057672 | 7057678 | 7mer-m8 | 7057659 | 7057679 | 151 | -14.2 |
| ADediting_1143785 | chr4_7057676_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-5697 | chr4 | 7057673 | 7057679 | 7mer-m8 | 7057659 | 7057680 | 146 | -18.01 |
| ADediting_1143786 | chr4_7057696_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-5571-5p | chr4 | 7057694 | 7057700 | 7mer-m8 | 7057679 | 7057701 | 150 | -26.87 |
| ADediting_1143787 | chr4_7057699_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-5571-5p | chr4 | 7057694 | 7057700 | 7mer-m8 | 7057679 | 7057701 | 150 | -26.87 |
| ADediting_1143788 | chr4_7057708_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-498-5p | chr4 | 7057701 | 7057707 | 7mer-m8 | 7057686 | 7057708 | 142 | -10.67 |
| ADediting_1143789 | chr4_7057774_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-431-5p | chr4 | 7057770 | 7057776 | 7mer-m8 | 7057759 | 7057777 | 147 | -15.62 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1391023 | chr8_140732605_- | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-151a-3p | chr4 | 7055883 | 7055889 | 7mer-m8 | 7055869 | 7055890 | 157 | -19 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000173011.12 | ENST00000515646.1 | TADA2B-205 | hsa-miR-151a-3p | chr4 | 7055883 | 7055889 | 7mer-m8 | 7055869 | 7055890 | 157 | -19 |
| ADediting_291761 | chr11_93733708_- | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-1304-3p | chr4 | 7056972 | 7056978 | 7mer-m8 | 7056956 | 7056979 | 162 | -27.2 |
| ADediting_496066 | chr15_66496985_- | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-4512 | chr4 | 7056927 | 7056934 | 8mer-1a | 7056914 | 7056934 | 145 | -19.93 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-4775 | chr4 | 7055593 | 7055599 | 7mer-m8 | 7055579 | 7055600 | 152 | -10.32 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000173011.12 | ENST00000515646.1 | TADA2B-205 | hsa-miR-4775 | chr4 | 7055593 | 7055599 | 7mer-m8 | 7055579 | 7055600 | 152 | -10.32 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-5688 | chr4 | 7056905 | 7056912 | 8mer-1a | 7056891 | 7056912 | 145 | -11.65 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-589-5p | chr4 | 7056346 | 7056352 | 7mer-m8 | 7056331 | 7056353 | 144 | -16.9 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-589-5p | chr4 | 7056865 | 7056872 | 8mer-1a | 7056851 | 7056872 | 153 | -22.87 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000173011.12 | ENST00000515646.1 | TADA2B-205 | hsa-miR-589-5p | chr4 | 7056346 | 7056352 | 7mer-m8 | 7056331 | 7056353 | 144 | -16.9 |
| ADediting_1643790 | chr3_121049689_+ | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-5682 | chr4 | 7056831 | 7056838 | 8mer-1a | 7056817 | 7056838 | 142 | -13.56 |
| ADediting_496066 | chr15_66496985_- | ENSG00000173011.12 | ENST00000310074.8 | TADA2B-201 | hsa-miR-4512 | chr4 | 7055874 | 7055880 | 7mer-m8 | 7055861 | 7055881 | 149 | -16.82 |
| ADediting_496066 | chr15_66496985_- | ENSG00000173011.12 | ENST00000515646.1 | TADA2B-205 | hsa-miR-4512 | chr4 | 7055874 | 7055880 | 7mer-m8 | 7055861 | 7055881 | 149 | -16.82 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for TADA2B |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000310074.8 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1143775 | ENST00000310074.8 | chr4_7057533_+ | 3950 | -1617.20 | -1616.90 | -1633.20 |
| ADediting_1143776 | ENST00000310074.8 | chr4_7057534_+ | 3951 | -1616.90 | -1616.90 | -1633.20 |
| ADediting_1143777 | ENST00000310074.8 | chr4_7057555_+ | 3972 | -1616.90 | -1616.90 | -1633.20 |
| ADediting_1143778 | ENST00000310074.8 | chr4_7057556_+ | 3973 | -1620.50 | -1616.90 | -1633.20 |
| ADediting_1143779 | ENST00000310074.8 | chr4_7057578_+ | 3995 | -1618.80 | -1616.90 | -1633.20 |
| ADediting_1143780 | ENST00000310074.8 | chr4_7057601_+ | 4018 | -1617.20 | -1616.90 | -1633.20 |
| ADediting_1143781 | ENST00000310074.8 | chr4_7057611_+ | 4028 | -1617.50 | -1616.90 | -1633.20 |
| ADediting_1143782 | ENST00000310074.8 | chr4_7057622_+ | 4039 | -1616.90 | -1616.90 | -1633.20 |
| ADediting_1143783 | ENST00000310074.8 | chr4_7057666_+ | 4083 | -1616.60 | -1616.90 | -1633.20 |
| ADediting_1143784 | ENST00000310074.8 | chr4_7057672_+ | 4089 | -1616.20 | -1616.90 | -1633.20 |
| ADediting_1143785 | ENST00000310074.8 | chr4_7057676_+ | 4093 | -1616.80 | -1616.90 | -1633.20 |
| ADediting_1143786 | ENST00000310074.8 | chr4_7057696_+ | 4113 | -1616.00 | -1616.90 | -1633.20 |
| ADediting_1143787 | ENST00000310074.8 | chr4_7057699_+ | 4116 | -1617.40 | -1616.90 | -1633.20 |
| ADediting_1143788 | ENST00000310074.8 | chr4_7057708_+ | 4125 | -1617.20 | -1616.90 | -1633.20 |
| ADediting_1143789 | ENST00000310074.8 | chr4_7057774_+ | 4191 | -1617.10 | -1616.90 | -1633.20 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for TADA2B |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 3.15567973446733e-84 | 0.841172149017678 | 2.12967146524318e-51 | 0.722992168865229 | 3.22976482122157e-20 | 0.491032619354001 |
| AC | 7.08904477362349e-121 | 0.943410525313469 | 1.01478496054392e-74 | 0.860845810003201 | 1.51838821989419e-12 | 0.427780877771198 |
| PCC | 3.93588631289894e-66 | 0.889302380903666 | 1.30682209746174e-62 | 0.878721394552352 | 3.09246823812351e-05 | 0.296615120237269 |
| CER | 8.56252248994798e-56 | 0.901806915524099 | 8.69360994267439e-35 | 0.800963810253483 | 0.00190413102527099 | 0.251521014494082 |
| TCX | 3.55165329285071e-66 | 0.929921400033585 | 4.4947009487311e-24 | 0.707487042219382 | 0.0046518690558936 | 0.229904488390479 |
| FP | 7.86831222678436e-41 | 0.799605485493469 | 3.63522575971091e-19 | 0.605196820681332 | 2.01134943167111e-10 | 0.453724271742648 |
| IFG | 1.91840139979279e-06 | 0.796369837945176 | 4.51663707802079e-07 | 0.822573147896959 | 0.216847499118713 | 0.255955068805226 |
| PG | 1.01718103419686e-30 | 0.717565207776633 | 1.22023950921596e-23 | 0.649217675423698 | 0.00431907236915892 | 0.20835862295127 |
| STG | 3.16315523316193e-26 | 0.864562606687115 | 2.3799346903607e-13 | 0.694422463397615 | 0.123140649107744 | 0.169535962427028 |
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Relation with AD stages for TADA2B |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 0.00105100145244861 | 0.311042355768688 |
| TCX | 4.9659817473483e-05 | 0.38344607883893 |
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RelatedDrugs for TADA2B |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TADA2B |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
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