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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for RPL23 |
 Gene summary |
| Gene information | Gene symbol | RPL23 | Gene ID | 9349 |
| Gene name | ribosomal protein L23 | |
| Synonyms | L23|rpL17 | |
| Cytomap | 17q12 | |
| Type of gene | protein-coding | |
| Description | 60S ribosomal protein L2360S ribosomal protein L17large ribosomal subunit protein uL14ribosomal protein L17 | |
| Modification date | 20200313 | |
| UniProtAcc | P62829, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| RPL23 | GO:0032986 | protein-DNA complex disassembly | 19160485 |
| RPL23 | GO:1904667 | negative regulation of ubiquitin protein ligase activity | 15314173 |
| RPL23 | GO:2000059 | negative regulation of ubiquitin-dependent protein catabolic process | 15314173 |
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RNA A-to-I events for RPL23 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_615290(38848350, -), ADediting_615291(38848354, -), ADediting_615292(38848367, -), ADediting_615293(38848371, -), ADediting_615294(38848376, -), ADediting_615295(38848377, -), ADediting_615296(38848384, -), ADediting_615297(38848394, -), ADediting_615298(38848402, -), ADediting_615299(38848407, -), ADediting_615300(38848410, -), ADediting_615301(38848421, -), ADediting_615302(38848426, -), ADediting_615303(38848436, -), ADediting_615304(38848449, -), ADediting_615305(38848451, -), ADediting_615306(38848460, -), ADediting_615307(38848465, -), ADediting_615308(38848483, -), ADediting_615309(38849474, -), ADediting_615310(38849502, -), ADediting_615311(38849505, -), ADediting_615312(38849506, -), ADediting_615313(38849507, -), ADediting_615314(38849508, -), ADediting_615315(38849509, -), ADediting_615316(38849511, -), ADediting_615317(38849513, -), ADediting_615318(38849514, -), ADediting_615319(38849515, -), ADediting_615320(38849531, -), ADediting_615321(38849532, -), ADediting_615322(38849557, -), ADediting_615323(38849582, -), ADediting_615324(38849586, -), ADediting_615325(38849587, -), ADediting_615326(38849608, -), ADediting_615327(38849615, -), ADediting_615328(38849622, -), ADediting_615329(38849890, -), ADediting_615330(38849903, -), ADediting_615331(38849917, -), ADediting_615332(38849925, -), ADediting_615333(38849946, -), ADediting_615334(38849961, -), ADediting_615335(38849970, -), ADediting_615336(38849990, -), ADediting_615337(38849996, -), ADediting_615338(38850006, -), ADediting_615339(38850009, -), ADediting_615340(38850010, -), ADediting_615341(38850018, -), ADediting_615342(38850035, -), ADediting_615343(38850036, -), ADediting_615344(38850043, -), ADediting_1546239(38848506, -), ADediting_1546240(38849924, -), |
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RNA editing positional annotations for RPL23 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_615290 | chr17_38848350_- | UTR3 |
| ADediting_615291 | chr17_38848354_- | UTR3 |
| ADediting_615292 | chr17_38848367_- | UTR3 |
| ADediting_615293 | chr17_38848371_- | UTR3 |
| ADediting_615294 | chr17_38848376_- | UTR3 |
| ADediting_615295 | chr17_38848377_- | UTR3 |
| ADediting_615296 | chr17_38848384_- | UTR3 |
| ADediting_615297 | chr17_38848394_- | UTR3 |
| ADediting_615298 | chr17_38848402_- | UTR3 |
| ADediting_615299 | chr17_38848407_- | UTR3 |
| ADediting_615300 | chr17_38848410_- | UTR3 |
| ADediting_615301 | chr17_38848421_- | UTR3 |
| ADediting_615302 | chr17_38848426_- | UTR3 |
| ADediting_615303 | chr17_38848436_- | UTR3 |
| ADediting_615304 | chr17_38848449_- | UTR3 |
| ADediting_615305 | chr17_38848451_- | UTR3 |
| ADediting_615306 | chr17_38848460_- | UTR3 |
| ADediting_615307 | chr17_38848465_- | UTR3 |
| ADediting_615308 | chr17_38848483_- | UTR3 |
| ADediting_615309 | chr17_38849474_- | UTR3 |
| ADediting_615310 | chr17_38849502_- | UTR3 |
| ADediting_615311 | chr17_38849505_- | UTR3 |
| ADediting_615312 | chr17_38849506_- | UTR3 |
| ADediting_615313 | chr17_38849507_- | UTR3 |
| ADediting_615314 | chr17_38849508_- | UTR3 |
| ADediting_615315 | chr17_38849509_- | UTR3 |
| ADediting_615316 | chr17_38849511_- | UTR3 |
| ADediting_615317 | chr17_38849513_- | UTR3 |
| ADediting_615318 | chr17_38849514_- | UTR3 |
| ADediting_615319 | chr17_38849515_- | UTR3 |
| ADediting_615320 | chr17_38849531_- | UTR3 |
| ADediting_615321 | chr17_38849532_- | UTR3 |
| ADediting_615322 | chr17_38849557_- | UTR3 |
| ADediting_615323 | chr17_38849582_- | UTR3 |
| ADediting_615324 | chr17_38849586_- | UTR3 |
| ADediting_615325 | chr17_38849587_- | UTR3 |
| ADediting_615326 | chr17_38849608_- | UTR3 |
| ADediting_615327 | chr17_38849615_- | UTR3 |
| ADediting_615328 | chr17_38849622_- | UTR3 |
| ADediting_615329 | chr17_38849890_- | UTR3 |
| ADediting_615330 | chr17_38849903_- | UTR3 |
| ADediting_615331 | chr17_38849917_- | UTR3 |
| ADediting_615332 | chr17_38849925_- | UTR3 |
| ADediting_615333 | chr17_38849946_- | UTR3 |
| ADediting_615334 | chr17_38849961_- | UTR3 |
| ADediting_615335 | chr17_38849970_- | UTR3 |
| ADediting_615336 | chr17_38849990_- | UTR3 |
| ADediting_615337 | chr17_38849996_- | UTR3 |
| ADediting_615338 | chr17_38850006_- | UTR3 |
| ADediting_615339 | chr17_38850009_- | UTR3 |
| ADediting_615340 | chr17_38850010_- | UTR3 |
| ADediting_615341 | chr17_38850018_- | UTR3 |
| ADediting_615342 | chr17_38850035_- | UTR3 |
| ADediting_615343 | chr17_38850036_- | UTR3 |
| ADediting_615344 | chr17_38850043_- | UTR3 |
| ADediting_1546239 | chr17_38848506_- | UTR3 |
| ADediting_1546240 | chr17_38849924_- | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_615290 | chr17_38848350_- | SINE | Alu | Name=AluSx |
| ADediting_615291 | chr17_38848354_- | SINE | Alu | Name=AluSx |
| ADediting_615292 | chr17_38848367_- | SINE | Alu | Name=AluSx |
| ADediting_615293 | chr17_38848371_- | SINE | Alu | Name=AluSx |
| ADediting_615294 | chr17_38848376_- | SINE | Alu | Name=AluSx |
| ADediting_615295 | chr17_38848377_- | SINE | Alu | Name=AluSx |
| ADediting_615296 | chr17_38848384_- | SINE | Alu | Name=AluSx |
| ADediting_615297 | chr17_38848394_- | SINE | Alu | Name=AluSx |
| ADediting_615298 | chr17_38848402_- | SINE | Alu | Name=AluSx |
| ADediting_615299 | chr17_38848407_- | SINE | Alu | Name=AluSx |
| ADediting_615300 | chr17_38848410_- | SINE | Alu | Name=AluSx |
| ADediting_615301 | chr17_38848421_- | SINE | Alu | Name=AluSx |
| ADediting_615302 | chr17_38848426_- | SINE | Alu | Name=AluSx |
| ADediting_615303 | chr17_38848436_- | SINE | Alu | Name=AluSx |
| ADediting_615304 | chr17_38848449_- | SINE | Alu | Name=AluSx |
| ADediting_615305 | chr17_38848451_- | SINE | Alu | Name=AluSx |
| ADediting_615306 | chr17_38848460_- | SINE | Alu | Name=AluSx |
| ADediting_615307 | chr17_38848465_- | SINE | Alu | Name=AluSx |
| ADediting_615308 | chr17_38848483_- | SINE | Alu | Name=AluSx |
| ADediting_615309 | chr17_38849474_- | SINE | Alu | Name=AluSg |
| ADediting_615310 | chr17_38849502_- | SINE | Alu | Name=AluSg |
| ADediting_615311 | chr17_38849505_- | SINE | Alu | Name=AluSg |
| ADediting_615312 | chr17_38849506_- | SINE | Alu | Name=AluSg |
| ADediting_615313 | chr17_38849507_- | SINE | Alu | Name=AluSg |
| ADediting_615314 | chr17_38849508_- | SINE | Alu | Name=AluSg |
| ADediting_615315 | chr17_38849509_- | SINE | Alu | Name=AluSg |
| ADediting_615316 | chr17_38849511_- | SINE | Alu | Name=AluSg |
| ADediting_615317 | chr17_38849513_- | SINE | Alu | Name=AluSg |
| ADediting_615318 | chr17_38849514_- | SINE | Alu | Name=AluSg |
| ADediting_615319 | chr17_38849515_- | SINE | Alu | Name=AluSg |
| ADediting_615320 | chr17_38849531_- | SINE | Alu | Name=AluSg |
| ADediting_615321 | chr17_38849532_- | SINE | Alu | Name=AluSg |
| ADediting_615322 | chr17_38849557_- | SINE | Alu | Name=AluSg |
| ADediting_615323 | chr17_38849582_- | SINE | Alu | Name=AluSg |
| ADediting_615324 | chr17_38849586_- | SINE | Alu | Name=AluSg |
| ADediting_615325 | chr17_38849587_- | SINE | Alu | Name=AluSg |
| ADediting_615326 | chr17_38849608_- | SINE | Alu | Name=AluSg |
| ADediting_615327 | chr17_38849615_- | SINE | Alu | Name=AluSg |
| ADediting_615328 | chr17_38849622_- | SINE | Alu | Name=AluSg |
| ADediting_615329 | chr17_38849890_- | SINE | Alu | Name=AluSx |
| ADediting_615330 | chr17_38849903_- | SINE | Alu | Name=AluSx |
| ADediting_615331 | chr17_38849917_- | SINE | Alu | Name=AluSx |
| ADediting_615332 | chr17_38849925_- | SINE | Alu | Name=AluSx |
| ADediting_615333 | chr17_38849946_- | SINE | Alu | Name=AluSx |
| ADediting_615334 | chr17_38849961_- | SINE | Alu | Name=AluSx |
| ADediting_615335 | chr17_38849970_- | SINE | Alu | Name=AluSx |
| ADediting_615336 | chr17_38849990_- | SINE | Alu | Name=AluSx |
| ADediting_615337 | chr17_38849996_- | SINE | Alu | Name=AluSx |
| ADediting_615338 | chr17_38850006_- | SINE | Alu | Name=AluSx |
| ADediting_615339 | chr17_38850009_- | SINE | Alu | Name=AluSx |
| ADediting_615340 | chr17_38850010_- | SINE | Alu | Name=AluSx |
| ADediting_615341 | chr17_38850018_- | SINE | Alu | Name=AluSx |
| ADediting_615342 | chr17_38850035_- | SINE | Alu | Name=AluSx |
| ADediting_615343 | chr17_38850036_- | SINE | Alu | Name=AluSx |
| ADediting_615344 | chr17_38850043_- | SINE | Alu | Name=AluSx |
| ADediting_1546239 | chr17_38848506_- | SINE | Alu | Name=AluSx |
| ADediting_1546240 | chr17_38849924_- | SINE | Alu | Name=AluSx |
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RNA A-to-I editing events in the alternative splicing sites for RPL23 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RPL23 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for RPL23 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for RPL23 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1546239 | chr17_38848506_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-638 | chr17 | 38848500 | 38848506 | 7mer-1a | 38848500 | 38848524 | 143 | -27.59 |
| ADediting_615291 | chr17_38848354_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-1913 | chr17 | 38848349 | 38848355 | 7mer-m8 | 38848348 | 38848369 | 147 | -22.1 |
| ADediting_615291 | chr17_38848354_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6849-3p | chr17 | 38848354 | 38848360 | 7mer-m8 | 38848353 | 38848374 | 140 | -18.03 |
| ADediting_615292 | chr17_38848367_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-1207-3p | chr17 | 38848367 | 38848373 | 7mer-m8 | 38848366 | 38848383 | 140 | -12.56 |
| ADediting_615292 | chr17_38848367_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-646 | chr17 | 38848365 | 38848371 | 7mer-m8 | 38848364 | 38848382 | 145 | -15.5 |
| ADediting_615294 | chr17_38848376_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-8052 | chr17 | 38848371 | 38848377 | 7mer-1a | 38848371 | 38848392 | 148 | -22.89 |
| ADediting_615295 | chr17_38848377_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-638 | chr17 | 38848371 | 38848377 | 7mer-1a | 38848371 | 38848394 | 141 | -24.65 |
| ADediting_615298 | chr17_38848402_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3190-5p | chr17 | 38848397 | 38848403 | 7mer-m8 | 38848396 | 38848415 | 147 | -16.24 |
| ADediting_615298 | chr17_38848402_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-548s | chr17 | 38848398 | 38848404 | 7mer-m8 | 38848397 | 38848419 | 143 | -11.46 |
| ADediting_615299 | chr17_38848407_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4778-5p | chr17 | 38848404 | 38848410 | 7mer-m8 | 38848403 | 38848425 | 162 | -17.29 |
| ADediting_615300 | chr17_38848410_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-153-3p | chr17 | 38848407 | 38848414 | 8mer-1a | 38848407 | 38848427 | 149 | -13.3 |
| ADediting_615300 | chr17_38848410_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3680-3p | chr17 | 38848405 | 38848412 | 8mer-1a | 38848405 | 38848427 | 141 | -16.09 |
| ADediting_615301 | chr17_38848421_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-483-5p | chr17 | 38848418 | 38848424 | 7mer-m8 | 38848417 | 38848438 | 140 | -14.56 |
| ADediting_615302 | chr17_38848426_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-676-5p | chr17 | 38848426 | 38848432 | 7mer-m8 | 38848425 | 38848446 | 147 | -17.68 |
| ADediting_615303 | chr17_38848436_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4638-3p | chr17 | 38848436 | 38848442 | 7mer-m8 | 38848435 | 38848456 | 143 | -14.71 |
| ADediting_615304 | chr17_38848449_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3176 | chr17 | 38848445 | 38848451 | 7mer-m8 | 38848444 | 38848462 | 144 | -18.63 |
| ADediting_615304 | chr17_38848449_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3922-3p | chr17 | 38848445 | 38848451 | 7mer-m8 | 38848444 | 38848464 | 152 | -21.51 |
| ADediting_615304 | chr17_38848449_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6878-3p | chr17 | 38848446 | 38848452 | 7mer-m8 | 38848445 | 38848467 | 154 | -28.42 |
| ADediting_615305 | chr17_38848451_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3156-3p | chr17 | 38848449 | 38848455 | 7mer-m8 | 38848448 | 38848469 | 165 | -22.22 |
| ADediting_615305 | chr17_38848451_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4433a-5p | chr17 | 38848448 | 38848454 | 7mer-m8 | 38848447 | 38848467 | 155 | -21.43 |
| ADediting_615308 | chr17_38848483_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6849-3p | chr17 | 38848483 | 38848489 | 7mer-m8 | 38848482 | 38848503 | 140 | -18.02 |
| ADediting_615309 | chr17_38849474_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3672 | chr17 | 38849469 | 38849475 | 7mer-m8 | 38849468 | 38849491 | 144 | -14.46 |
| ADediting_615309 | chr17_38849474_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6864-3p | chr17 | 38849469 | 38849475 | 7mer-m8 | 38849468 | 38849488 | 142 | -10.4 |
| ADediting_615312 | chr17_38849506_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6844 | chr17 | 38849505 | 38849511 | 7mer-m8 | 38849504 | 38849525 | 153 | -7.49 |
| ADediting_615313 | chr17_38849507_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-578 | chr17 | 38849505 | 38849511 | 7mer-m8 | 38849504 | 38849524 | 153 | -10.02 |
| ADediting_615313 | chr17_38849507_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-643 | chr17 | 38849506 | 38849513 | 8mer-1a | 38849506 | 38849528 | 142 | -11.91 |
| ADediting_615314 | chr17_38849508_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4742-3p | chr17 | 38849507 | 38849514 | 8mer-1a | 38849507 | 38849529 | 142 | -9.18 |
| ADediting_615316 | chr17_38849511_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-153-5p | chr17 | 38849511 | 38849517 | 7mer-m8 | 38849510 | 38849531 | 148 | -5.77 |
| ADediting_615316 | chr17_38849511_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3680-3p | chr17 | 38849506 | 38849513 | 8mer-1a | 38849506 | 38849528 | 140 | -16.47 |
| ADediting_615319 | chr17_38849515_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-630 | chr17 | 38849509 | 38849516 | 8mer-1a | 38849509 | 38849529 | 154 | -14.02 |
| ADediting_615320 | chr17_38849531_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3188 | chr17 | 38849527 | 38849533 | 7mer-m8 | 38849526 | 38849549 | 145 | -18.56 |
| ADediting_615320 | chr17_38849531_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-412-3p | chr17 | 38849531 | 38849537 | 7mer-m8 | 38849530 | 38849552 | 153 | -22.15 |
| ADediting_615320 | chr17_38849531_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6754-3p | chr17 | 38849531 | 38849537 | 7mer-m8 | 38849530 | 38849554 | 151 | -22.03 |
| ADediting_615321 | chr17_38849532_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-1229-3p | chr17 | 38849531 | 38849537 | 7mer-m8 | 38849530 | 38849552 | 150 | -17.67 |
| ADediting_615321 | chr17_38849532_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6511a-3p | chr17 | 38849531 | 38849538 | 8mer-1a | 38849531 | 38849553 | 149 | -22.59 |
| ADediting_615321 | chr17_38849532_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6511b-3p | chr17 | 38849531 | 38849538 | 8mer-1a | 38849531 | 38849554 | 156 | -24.43 |
| ADediting_615323 | chr17_38849582_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4707-3p | chr17 | 38849578 | 38849585 | 8mer-1a | 38849578 | 38849599 | 146 | -25.04 |
| ADediting_615324 | chr17_38849586_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-18a-3p | chr17 | 38849581 | 38849587 | 7mer-m8 | 38849580 | 38849600 | 146 | -19.39 |
| ADediting_615324 | chr17_38849586_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3176 | chr17 | 38849586 | 38849592 | 7mer-m8 | 38849585 | 38849603 | 144 | -17.34 |
| ADediting_615324 | chr17_38849586_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3922-3p | chr17 | 38849586 | 38849592 | 7mer-m8 | 38849585 | 38849607 | 142 | -17.22 |
| ADediting_615324 | chr17_38849586_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-874-3p | chr17 | 38849582 | 38849588 | 7mer-m8 | 38849581 | 38849604 | 164 | -34.57 |
| ADediting_615326 | chr17_38849608_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-8052 | chr17 | 38849603 | 38849609 | 7mer-1a | 38849603 | 38849624 | 141 | -21.39 |
| ADediting_615328 | chr17_38849622_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4691-3p | chr17 | 38849618 | 38849624 | 7mer-m8 | 38849617 | 38849640 | 143 | -24.41 |
| ADediting_615329 | chr17_38849890_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-1228-5p | chr17 | 38849886 | 38849892 | 7mer-m8 | 38849885 | 38849903 | 153 | -23.68 |
| ADediting_615329 | chr17_38849890_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4486 | chr17 | 38849885 | 38849891 | 7mer-m8 | 38849884 | 38849899 | 149 | -23.31 |
| ADediting_615329 | chr17_38849890_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-7112-5p | chr17 | 38849890 | 38849896 | 7mer-m8 | 38849889 | 38849910 | 150 | -19.65 |
| ADediting_615332 | chr17_38849925_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3128 | chr17 | 38849924 | 38849931 | 8mer-1a | 38849924 | 38849949 | 155 | -21.19 |
| ADediting_615332 | chr17_38849925_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4720-5p | chr17 | 38849924 | 38849930 | 7mer-1a | 38849924 | 38849945 | 140 | -18.87 |
| ADediting_615332 | chr17_38849925_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6868-5p | chr17 | 38849924 | 38849930 | 7mer-1a | 38849924 | 38849946 | 142 | -19.11 |
| ADediting_615333 | chr17_38849946_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-340-3p | chr17 | 38849945 | 38849951 | 7mer-m8 | 38849944 | 38849965 | 145 | -18.01 |
| ADediting_615333 | chr17_38849946_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6827-3p | chr17 | 38849945 | 38849951 | 7mer-m8 | 38849944 | 38849964 | 145 | -15.68 |
| ADediting_615335 | chr17_38849970_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-548aa | chr17 | 38849965 | 38849971 | 7mer-m8 | 38849964 | 38849990 | 141 | -10.47 |
| ADediting_615335 | chr17_38849970_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-548ap-3p | chr17 | 38849965 | 38849971 | 7mer-m8 | 38849964 | 38849982 | 140 | -7.43 |
| ADediting_615335 | chr17_38849970_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-548t-3p | chr17 | 38849965 | 38849971 | 7mer-m8 | 38849964 | 38849990 | 141 | -10.47 |
| ADediting_615336 | chr17_38849990_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6720-3p | chr17 | 38849989 | 38849995 | 7mer-m8 | 38849988 | 38850009 | 148 | -18.9 |
| ADediting_615338 | chr17_38850006_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4691-3p | chr17 | 38850002 | 38850008 | 7mer-m8 | 38850001 | 38850028 | 150 | -26.36 |
| ADediting_615340 | chr17_38850010_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3664-3p | chr17 | 38850008 | 38850014 | 7mer-m8 | 38850007 | 38850030 | 154 | -20.99 |
| ADediting_615340 | chr17_38850010_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-510-5p | chr17 | 38850006 | 38850013 | 8mer-1a | 38850006 | 38850029 | 156 | -23.27 |
| ADediting_615341 | chr17_38850018_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6089 | chr17 | 38850013 | 38850019 | 7mer-m8 | 38850012 | 38850035 | 164 | -39.99 |
| ADediting_615342 | chr17_38850035_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6078 | chr17 | 38850031 | 38850038 | 8mer-1a | 38850031 | 38850047 | 149 | -20.2 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_615290 | chr17_38848350_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-1976 | chr17 | 38848345 | 38848352 | 8mer-1a | 38848345 | 38848365 | 149 | -21.37 |
| ADediting_615290 | chr17_38848350_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6747-3p | chr17 | 38848347 | 38848354 | 8mer-1a | 38848347 | 38848368 | 150 | -24.11 |
| ADediting_615292 | chr17_38848367_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-562 | chr17 | 38848364 | 38848370 | 7mer-m8 | 38848363 | 38848382 | 150 | -12.74 |
| ADediting_615292 | chr17_38848367_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-5697 | chr17 | 38848363 | 38848369 | 7mer-m8 | 38848362 | 38848384 | 149 | -14.9 |
| ADediting_615293 | chr17_38848371_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-5089-5p | chr17 | 38848371 | 38848377 | 7mer-m8 | 38848370 | 38848389 | 153 | -18.47 |
| ADediting_615293 | chr17_38848371_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6506-5p | chr17 | 38848370 | 38848376 | 7mer-m8 | 38848369 | 38848389 | 146 | -15.57 |
| ADediting_615294 | chr17_38848376_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-10399-5p | chr17 | 38848375 | 38848381 | 7mer-m8 | 38848374 | 38848394 | 153 | -11.34 |
| ADediting_615294 | chr17_38848376_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-5089-5p | chr17 | 38848371 | 38848377 | 7mer-m8 | 38848370 | 38848389 | 153 | -18.47 |
| ADediting_615294 | chr17_38848376_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6504-3p | chr17 | 38848375 | 38848381 | 7mer-m8 | 38848374 | 38848397 | 155 | -17.23 |
| ADediting_615295 | chr17_38848377_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-10399-5p | chr17 | 38848375 | 38848381 | 7mer-m8 | 38848374 | 38848394 | 153 | -11.34 |
| ADediting_615295 | chr17_38848377_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6504-3p | chr17 | 38848375 | 38848381 | 7mer-m8 | 38848374 | 38848397 | 155 | -17.23 |
| ADediting_615296 | chr17_38848384_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-501-3p | chr17 | 38848383 | 38848389 | 7mer-m8 | 38848382 | 38848405 | 146 | -17.12 |
| ADediting_615296 | chr17_38848384_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-502-3p | chr17 | 38848383 | 38848389 | 7mer-m8 | 38848382 | 38848405 | 142 | -16.57 |
| ADediting_615297 | chr17_38848394_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6872-3p | chr17 | 38848391 | 38848397 | 7mer-m8 | 38848390 | 38848410 | 145 | -14.34 |
| ADediting_615298 | chr17_38848402_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4735-5p | chr17 | 38848401 | 38848407 | 7mer-m8 | 38848400 | 38848421 | 140 | -4.47 |
| ADediting_615298 | chr17_38848402_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4775 | chr17 | 38848402 | 38848408 | 7mer-m8 | 38848401 | 38848422 | 148 | -4.65 |
| ADediting_615298 | chr17_38848402_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4794 | chr17 | 38848397 | 38848403 | 7mer-m8 | 38848396 | 38848417 | 140 | -13.38 |
| ADediting_615298 | chr17_38848402_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-664a-5p | chr17 | 38848397 | 38848403 | 7mer-m8 | 38848396 | 38848419 | 141 | -13.97 |
| ADediting_615299 | chr17_38848407_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4775 | chr17 | 38848402 | 38848408 | 7mer-m8 | 38848401 | 38848422 | 148 | -4.65 |
| ADediting_615301 | chr17_38848421_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3170 | chr17 | 38848421 | 38848427 | 7mer-m8 | 38848420 | 38848441 | 146 | -13.46 |
| ADediting_615301 | chr17_38848421_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6855-5p | chr17 | 38848421 | 38848427 | 7mer-m8 | 38848420 | 38848446 | 151 | -20.6 |
| ADediting_615301 | chr17_38848421_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6890-5p | chr17 | 38848420 | 38848426 | 7mer-m8 | 38848419 | 38848439 | 140 | -15.16 |
| ADediting_615302 | chr17_38848426_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-1305 | chr17 | 38848426 | 38848432 | 7mer-m8 | 38848425 | 38848446 | 144 | -12.28 |
| ADediting_615302 | chr17_38848426_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-193b-5p | chr17 | 38848421 | 38848428 | 8mer-1a | 38848421 | 38848442 | 147 | -15.28 |
| ADediting_615302 | chr17_38848426_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3170 | chr17 | 38848421 | 38848427 | 7mer-m8 | 38848420 | 38848441 | 146 | -13.46 |
| ADediting_615302 | chr17_38848426_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6855-5p | chr17 | 38848421 | 38848427 | 7mer-m8 | 38848420 | 38848446 | 151 | -20.6 |
| ADediting_615303 | chr17_38848436_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4520-2-3p | chr17 | 38848436 | 38848442 | 7mer-m8 | 38848435 | 38848456 | 145 | -13.92 |
| ADediting_615303 | chr17_38848436_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4781-3p | chr17 | 38848433 | 38848439 | 7mer-m8 | 38848432 | 38848455 | 148 | -16.12 |
| ADediting_615304 | chr17_38848449_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3663-5p | chr17 | 38848445 | 38848451 | 7mer-m8 | 38848444 | 38848463 | 144 | -20.34 |
| ADediting_615304 | chr17_38848449_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6131 | chr17 | 38848444 | 38848450 | 7mer-m8 | 38848443 | 38848461 | 140 | -16.72 |
| ADediting_615304 | chr17_38848449_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6843-3p | chr17 | 38848446 | 38848452 | 7mer-m8 | 38848445 | 38848466 | 154 | -19.55 |
| ADediting_615304 | chr17_38848449_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6848-3p | chr17 | 38848446 | 38848452 | 7mer-m8 | 38848445 | 38848464 | 141 | -16.7 |
| ADediting_615305 | chr17_38848451_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6794-3p | chr17 | 38848451 | 38848457 | 7mer-m8 | 38848450 | 38848469 | 153 | -23.82 |
| ADediting_615305 | chr17_38848451_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6843-3p | chr17 | 38848446 | 38848452 | 7mer-m8 | 38848445 | 38848466 | 154 | -19.55 |
| ADediting_615305 | chr17_38848451_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6848-3p | chr17 | 38848446 | 38848452 | 7mer-m8 | 38848445 | 38848464 | 141 | -16.7 |
| ADediting_615307 | chr17_38848465_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4330 | chr17 | 38848464 | 38848470 | 7mer-m8 | 38848463 | 38848479 | 144 | -16.93 |
| ADediting_615307 | chr17_38848465_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6790-3p | chr17 | 38848460 | 38848466 | 7mer-1a | 38848460 | 38848482 | 141 | -24.94 |
| ADediting_615309 | chr17_38849474_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-10399-5p | chr17 | 38849473 | 38849479 | 7mer-m8 | 38849472 | 38849492 | 145 | -11 |
| ADediting_615309 | chr17_38849474_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6504-3p | chr17 | 38849473 | 38849479 | 7mer-m8 | 38849472 | 38849491 | 140 | -11.66 |
| ADediting_615310 | chr17_38849502_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4735-5p | chr17 | 38849501 | 38849507 | 7mer-m8 | 38849500 | 38849521 | 140 | -4.28 |
| ADediting_615311 | chr17_38849505_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4735-5p | chr17 | 38849501 | 38849507 | 7mer-m8 | 38849500 | 38849521 | 140 | -4.28 |
| ADediting_615312 | chr17_38849506_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4735-5p | chr17 | 38849501 | 38849507 | 7mer-m8 | 38849500 | 38849521 | 140 | -4.28 |
| ADediting_615324 | chr17_38849586_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-212-5p | chr17 | 38849584 | 38849590 | 7mer-m8 | 38849583 | 38849607 | 153 | -16.86 |
| ADediting_615325 | chr17_38849587_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-212-5p | chr17 | 38849584 | 38849590 | 7mer-m8 | 38849583 | 38849607 | 153 | -16.86 |
| ADediting_615325 | chr17_38849587_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6878-3p | chr17 | 38849586 | 38849593 | 8mer-1a | 38849586 | 38849606 | 141 | -12.78 |
| ADediting_615326 | chr17_38849608_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-10399-5p | chr17 | 38849607 | 38849613 | 7mer-m8 | 38849606 | 38849623 | 146 | -12.34 |
| ADediting_615326 | chr17_38849608_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-5089-5p | chr17 | 38849602 | 38849609 | 8mer-1a | 38849602 | 38849621 | 149 | -14.31 |
| ADediting_615326 | chr17_38849608_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6504-3p | chr17 | 38849607 | 38849613 | 7mer-m8 | 38849606 | 38849627 | 145 | -12.58 |
| ADediting_615327 | chr17_38849615_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3085-5p | chr17 | 38849613 | 38849619 | 7mer-m8 | 38849612 | 38849637 | 150 | -27.24 |
| ADediting_615327 | chr17_38849615_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-552-3p | chr17 | 38849609 | 38849616 | 8mer-1a | 38849609 | 38849628 | 154 | -18.21 |
| ADediting_615327 | chr17_38849615_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-764 | chr17 | 38849611 | 38849617 | 7mer-m8 | 38849610 | 38849630 | 151 | -21.32 |
| ADediting_615328 | chr17_38849622_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-5690 | chr17 | 38849618 | 38849624 | 7mer-m8 | 38849617 | 38849637 | 152 | -17.85 |
| ADediting_615329 | chr17_38849890_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-541-3p | chr17 | 38849888 | 38849894 | 7mer-m8 | 38849887 | 38849908 | 155 | -17.76 |
| ADediting_615329 | chr17_38849890_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-654-5p | chr17 | 38849888 | 38849894 | 7mer-m8 | 38849887 | 38849907 | 149 | -19.07 |
| ADediting_615329 | chr17_38849890_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6756-5p | chr17 | 38849886 | 38849893 | 8mer-1a | 38849886 | 38849914 | 148 | -27.77 |
| ADediting_615329 | chr17_38849890_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6776-5p | chr17 | 38849885 | 38849891 | 7mer-m8 | 38849884 | 38849904 | 142 | -18.3 |
| ADediting_615330 | chr17_38849903_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3614-5p | chr17 | 38849898 | 38849904 | 7mer-1a | 38849898 | 38849921 | 143 | -17.37 |
| ADediting_615331 | chr17_38849917_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-8081 | chr17 | 38849915 | 38849922 | 8mer-1a | 38849915 | 38849937 | 150 | -15.02 |
| ADediting_615333 | chr17_38849946_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-10a-5p | chr17 | 38849942 | 38849948 | 7mer-m8 | 38849941 | 38849964 | 144 | -19.07 |
| ADediting_615333 | chr17_38849946_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-10b-5p | chr17 | 38849942 | 38849948 | 7mer-m8 | 38849941 | 38849964 | 148 | -21.07 |
| ADediting_615333 | chr17_38849946_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4421 | chr17 | 38849944 | 38849950 | 7mer-m8 | 38849943 | 38849964 | 150 | -14.79 |
| ADediting_615333 | chr17_38849946_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-5699-3p | chr17 | 38849944 | 38849950 | 7mer-m8 | 38849943 | 38849964 | 145 | -17.13 |
| ADediting_615335 | chr17_38849970_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-7844-5p | chr17 | 38849966 | 38849972 | 7mer-m8 | 38849965 | 38849986 | 152 | -14.64 |
| ADediting_615336 | chr17_38849990_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-1271-3p | chr17 | 38849989 | 38849995 | 7mer-m8 | 38849988 | 38850007 | 155 | -21.49 |
| ADediting_615336 | chr17_38849990_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-3665 | chr17 | 38849985 | 38849991 | 7mer-m8 | 38849984 | 38850001 | 145 | -16.92 |
| ADediting_615336 | chr17_38849990_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-550a-3-5p | chr17 | 38849989 | 38849995 | 7mer-m8 | 38849988 | 38850007 | 140 | -14.45 |
| ADediting_615336 | chr17_38849990_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-550a-5p | chr17 | 38849989 | 38849995 | 7mer-m8 | 38849988 | 38850010 | 140 | -18.24 |
| ADediting_615336 | chr17_38849990_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-764 | chr17 | 38849986 | 38849992 | 7mer-m8 | 38849985 | 38850005 | 149 | -21.89 |
| ADediting_615338 | chr17_38850006_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-5690 | chr17 | 38850002 | 38850008 | 7mer-m8 | 38850001 | 38850021 | 145 | -16.74 |
| ADediting_615340 | chr17_38850010_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4266 | chr17 | 38850009 | 38850016 | 8mer-1a | 38850009 | 38850024 | 146 | -18.48 |
| ADediting_615341 | chr17_38850018_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4478 | chr17 | 38850014 | 38850020 | 7mer-m8 | 38850013 | 38850028 | 149 | -25.05 |
| ADediting_615341 | chr17_38850018_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4649-3p | chr17 | 38850017 | 38850023 | 7mer-m8 | 38850016 | 38850036 | 140 | -14.11 |
| ADediting_615341 | chr17_38850018_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-7160-5p | chr17 | 38850016 | 38850022 | 7mer-m8 | 38850015 | 38850035 | 146 | -20.4 |
| ADediting_615344 | chr17_38850043_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4308 | chr17 | 38850040 | 38850046 | 7mer-m8 | 38850039 | 38850056 | 143 | -15.14 |
| ADediting_615344 | chr17_38850043_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-6732-3p | chr17 | 38850038 | 38850044 | 7mer-m8 | 38850037 | 38850059 | 140 | -10.58 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-589-3p | chr17 | 38848048 | 38848054 | 7mer-m8 | 38848047 | 38848072 | 152 | -21.41 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000125691.13 | ENST00000577407.5 | RPL23-207 | hsa-miR-337-3p | chr17 | 38850198 | 38850204 | 7mer-m8 | 38850197 | 38850216 | 144 | -12.39 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-556-3p | chr17 | 38848121 | 38848127 | 7mer-m8 | 38848120 | 38848141 | 152 | -12.45 |
| ADediting_291761 | chr11_93733708_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-1304-3p | chr17 | 38849422 | 38849428 | 7mer-m8 | 38849421 | 38849442 | 163 | -28.32 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-5688 | chr17 | 38849269 | 38849275 | 7mer-m8 | 38849268 | 38849289 | 148 | -9.4 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-641 | chr17 | 38848138 | 38848144 | 7mer-m8 | 38848137 | 38848159 | 151 | -14.46 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000125691.13 | ENST00000577407.5 | RPL23-207 | hsa-miR-641 | chr17 | 38850266 | 38850273 | 8mer-1a | 38850266 | 38850288 | 146 | -12.46 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-641 | chr17 | 38848138 | 38848144 | 7mer-m8 | 38848137 | 38848159 | 151 | -14.46 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000125691.13 | ENST00000577407.5 | RPL23-207 | hsa-miR-641 | chr17 | 38850266 | 38850273 | 8mer-1a | 38850266 | 38850288 | 146 | -12.46 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000125691.13 | ENST00000479035.7 | RPL23-206 | hsa-miR-4775 | chr17 | 38848402 | 38848408 | 7mer-m8 | 38848401 | 38848422 | 148 | -4.65 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for RPL23 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000479035.7 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_615290 | ENST00000479035.7 | chr17_38848350_- | 2216 | -911.40 | -912.10 | -969.90 |
| ADediting_615291 | ENST00000479035.7 | chr17_38848354_- | 2212 | -911.20 | -912.10 | -969.90 |
| ADediting_615292 | ENST00000479035.7 | chr17_38848367_- | 2199 | -912.10 | -912.10 | -969.90 |
| ADediting_615293 | ENST00000479035.7 | chr17_38848371_- | 2195 | -911.40 | -912.10 | -969.90 |
| ADediting_615294 | ENST00000479035.7 | chr17_38848376_- | 2190 | -912.10 | -912.10 | -969.90 |
| ADediting_615295 | ENST00000479035.7 | chr17_38848377_- | 2189 | -912.20 | -912.10 | -969.90 |
| ADediting_615296 | ENST00000479035.7 | chr17_38848384_- | 2182 | -915.90 | -912.10 | -969.90 |
| ADediting_615297 | ENST00000479035.7 | chr17_38848394_- | 2172 | -911.70 | -912.10 | -969.90 |
| ADediting_615298 | ENST00000479035.7 | chr17_38848402_- | 2164 | -911.80 | -912.10 | -969.90 |
| ADediting_615299 | ENST00000479035.7 | chr17_38848407_- | 2159 | -912.20 | -912.10 | -969.90 |
| ADediting_615300 | ENST00000479035.7 | chr17_38848410_- | 2156 | -912.10 | -912.10 | -969.90 |
| ADediting_615301 | ENST00000479035.7 | chr17_38848421_- | 2145 | -915.50 | -912.10 | -969.90 |
| ADediting_615302 | ENST00000479035.7 | chr17_38848426_- | 2140 | -912.10 | -912.10 | -969.90 |
| ADediting_615303 | ENST00000479035.7 | chr17_38848436_- | 2130 | -912.10 | -912.10 | -969.90 |
| ADediting_615304 | ENST00000479035.7 | chr17_38848449_- | 2117 | -913.10 | -912.10 | -969.90 |
| ADediting_615305 | ENST00000479035.7 | chr17_38848451_- | 2115 | -911.20 | -912.10 | -969.90 |
| ADediting_615306 | ENST00000479035.7 | chr17_38848460_- | 2106 | -911.40 | -912.10 | -969.90 |
| ADediting_615307 | ENST00000479035.7 | chr17_38848465_- | 2101 | -911.20 | -912.10 | -969.90 |
| ADediting_615308 | ENST00000479035.7 | chr17_38848483_- | 2083 | -914.80 | -912.10 | -969.90 |
| ADediting_1546239 | ENST00000479035.7 | chr17_38848506_- | 2060 | -912.10 | -912.10 | -969.90 |
| ADediting_615309 | ENST00000479035.7 | chr17_38849474_- | 1092 | -913.10 | -912.10 | -969.90 |
| ADediting_615310 | ENST00000479035.7 | chr17_38849502_- | 1064 | -913.80 | -912.10 | -969.90 |
| ADediting_615311 | ENST00000479035.7 | chr17_38849505_- | 1061 | -912.30 | -912.10 | -969.90 |
| ADediting_615312 | ENST00000479035.7 | chr17_38849506_- | 1060 | -912.20 | -912.10 | -969.90 |
| ADediting_615313 | ENST00000479035.7 | chr17_38849507_- | 1059 | -912.50 | -912.10 | -969.90 |
| ADediting_615314 | ENST00000479035.7 | chr17_38849508_- | 1058 | -914.10 | -912.10 | -969.90 |
| ADediting_615315 | ENST00000479035.7 | chr17_38849509_- | 1057 | -912.40 | -912.10 | -969.90 |
| ADediting_615316 | ENST00000479035.7 | chr17_38849511_- | 1055 | -912.60 | -912.10 | -969.90 |
| ADediting_615317 | ENST00000479035.7 | chr17_38849513_- | 1053 | -915.10 | -912.10 | -969.90 |
| ADediting_615318 | ENST00000479035.7 | chr17_38849514_- | 1052 | -913.40 | -912.10 | -969.90 |
| ADediting_615319 | ENST00000479035.7 | chr17_38849515_- | 1051 | -912.50 | -912.10 | -969.90 |
| ADediting_615320 | ENST00000479035.7 | chr17_38849531_- | 1035 | -914.20 | -912.10 | -969.90 |
| ADediting_615321 | ENST00000479035.7 | chr17_38849532_- | 1034 | -915.00 | -912.10 | -969.90 |
| ADediting_615322 | ENST00000479035.7 | chr17_38849557_- | 1009 | -913.20 | -912.10 | -969.90 |
| ADediting_615323 | ENST00000479035.7 | chr17_38849582_- | 984 | -915.10 | -912.10 | -969.90 |
| ADediting_615324 | ENST00000479035.7 | chr17_38849586_- | 980 | -913.00 | -912.10 | -969.90 |
| ADediting_615325 | ENST00000479035.7 | chr17_38849587_- | 979 | -912.70 | -912.10 | -969.90 |
| ADediting_615326 | ENST00000479035.7 | chr17_38849608_- | 958 | -913.30 | -912.10 | -969.90 |
| ADediting_615327 | ENST00000479035.7 | chr17_38849615_- | 951 | -917.50 | -912.10 | -969.90 |
| ADediting_615328 | ENST00000479035.7 | chr17_38849622_- | 944 | -915.60 | -912.10 | -969.90 |
| ADediting_615329 | ENST00000479035.7 | chr17_38849890_- | 676 | -911.70 | -912.10 | -969.90 |
| ADediting_615330 | ENST00000479035.7 | chr17_38849903_- | 663 | -911.40 | -912.10 | -969.90 |
| ADediting_615331 | ENST00000479035.7 | chr17_38849917_- | 649 | -911.00 | -912.10 | -969.90 |
| ADediting_1546240 | ENST00000479035.7 | chr17_38849924_- | 642 | -916.00 | -912.10 | -969.90 |
| ADediting_615332 | ENST00000479035.7 | chr17_38849925_- | 641 | -915.40 | -912.10 | -969.90 |
| ADediting_615333 | ENST00000479035.7 | chr17_38849946_- | 620 | -915.90 | -912.10 | -969.90 |
| ADediting_615334 | ENST00000479035.7 | chr17_38849961_- | 605 | -912.10 | -912.10 | -969.90 |
| ADediting_615335 | ENST00000479035.7 | chr17_38849970_- | 596 | -911.70 | -912.10 | -969.90 |
| ADediting_615336 | ENST00000479035.7 | chr17_38849990_- | 576 | -911.70 | -912.10 | -969.90 |
| ADediting_615337 | ENST00000479035.7 | chr17_38849996_- | 570 | -912.10 | -912.10 | -969.90 |
| ADediting_615338 | ENST00000479035.7 | chr17_38850006_- | 560 | -911.80 | -912.10 | -969.90 |
| ADediting_615339 | ENST00000479035.7 | chr17_38850009_- | 557 | -911.80 | -912.10 | -969.90 |
| ADediting_615340 | ENST00000479035.7 | chr17_38850010_- | 556 | -911.20 | -912.10 | -969.90 |
| ADediting_615341 | ENST00000479035.7 | chr17_38850018_- | 548 | -911.40 | -912.10 | -969.90 |
| ADediting_615342 | ENST00000479035.7 | chr17_38850035_- | 531 | -911.80 | -912.10 | -969.90 |
| ADediting_615343 | ENST00000479035.7 | chr17_38850036_- | 530 | -911.80 | -912.10 | -969.90 |
| ADediting_615344 | ENST00000479035.7 | chr17_38850043_- | 523 | -918.30 | -912.10 | -969.90 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for RPL23 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_615324 | chr17_38849586_- | 3.41294283721559e-12 | 0.381749341559573 | 2.63953416136451e-09 | 0.329904449133043 | 0.148993011811748 | 0.0821557055783151 |
| DLPFC | ADediting_615344 | chr17_38850043_- | 0.0101897906205263 | 0.145736479207269 | 0.417957150777606 | 0.0461651948041388 | 1.44792653628392e-08 | 0.314943105145758 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.90711476297089e-21 | 0.502766790992022 | 1.26097627879971e-26 | 0.556690130170714 | 0.198737974439502 | 0.0731896633153138 |
| AC | 1.29148472633034e-66 | 0.836103734684742 | 1.61004517914927e-41 | 0.721797405743146 | 8.53224714766975e-17 | 0.494117882264765 |
| PCC | 7.45936328767747e-13 | 0.488598444898165 | 1.76891137375924e-12 | 0.481512643802507 | 0.0101670597089428 | 0.185565657350106 |
| CER | 1.04951098372348e-07 | 0.417686819602952 | 2.14094050145819e-05 | 0.339462763013746 | 0.366590086026632 | 0.0742390162872625 |
| TCX | 1.16663719999731e-10 | 0.495303173531156 | 0.0156837221292146 | 0.19699217712704 | 0.000220015722825912 | 0.297319054305418 |
| FP | 8.00172230775969e-09 | 0.415574080174321 | 5.34680016645482e-12 | 0.4871834760437 | 0.492769098609148 | -0.0517412991528302 |
| IFG | 0.0306294690392948 | 0.432961851538866 | 0.275590145442545 | 0.226810333213947 | 0.552283464874693 | -0.124791026939476 |
| PG | 5.56235198979723e-31 | 0.719761350386564 | 3.27441531455614e-17 | 0.566980175158347 | 0.369019256297951 | -0.0662416035767886 |
| STG | 9.33780964715382e-09 | 0.576794452611118 | 4.21832256562699e-07 | 0.519082737024942 | 0.521660043561442 | -0.0708899310729337 |
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Relation with AD stages for RPL23 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for RPL23 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RPL23 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| RPL23 | C0376545 | Hematologic Neoplasms | 1 | GENOMICS_ENGLAND |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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