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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for PIGM |
 Gene summary |
| Gene information | Gene symbol | PIGM | Gene ID | 93183 |
| Gene name | phosphatidylinositol glycan anchor biosynthesis class M | |
| Synonyms | GPI-MT-I | |
| Cytomap | 1q23.2 | |
| Type of gene | protein-coding | |
| Description | GPI mannosyltransferase 1DPM:GlcN-(acyl-)PI mannosyltransferaseGPI mannosyltransferase IPIG-M mannosyltransferasedol-P-Man dependent GPI mannosyltransferasephosphatidylinositol-glycan biosynthesis class M protein | |
| Modification date | 20200313 | |
| UniProtAcc | Q9H3S5, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for PIGM |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_36569(160026582, -), ADediting_36570(160026596, -), ADediting_36571(160026664, -), ADediting_36572(160026673, -), ADediting_36573(160026706, -), ADediting_36574(160026719, -), ADediting_36575(160026728, -), ADediting_36576(160026741, -), ADediting_36577(160026745, -), ADediting_36578(160026746, -), ADediting_36579(160026752, -), ADediting_36580(160026779, -), ADediting_36581(160026785, -), ADediting_36582(160026788, -), ADediting_36583(160026800, -), ADediting_36584(160026817, -), ADediting_36585(160026819, -), ADediting_36586(160026884, -), ADediting_36587(160026896, -), ADediting_36588(160026901, -), ADediting_36589(160026906, -), ADediting_36590(160026914, -), ADediting_36591(160026920, -), ADediting_36592(160026921, -), ADediting_36593(160026940, -), ADediting_36594(160026944, -), ADediting_36595(160026966, -), ADediting_36596(160026967, -), ADediting_36597(160026972, -), ADediting_36598(160026980, -), ADediting_36599(160026989, -), ADediting_36600(160026992, -), ADediting_36601(160026994, -), ADediting_36602(160027015, -), ADediting_36603(160027017, -), ADediting_36604(160027019, -), ADediting_36605(160027062, -), ADediting_36606(160027071, -), ADediting_36607(160027088, -), ADediting_36608(160027089, -), ADediting_36609(160027091, -), ADediting_36610(160029473, -), ADediting_36611(160029538, -), ADediting_36612(160029561, -), ADediting_36613(160029864, -), ADediting_36614(160029898, -), ADediting_36615(160029899, -), ADediting_36616(160030000, -), ADediting_1515905(160026647, -), ADediting_1515906(160026657, -), ADediting_1515907(160026704, -), ADediting_1515908(160026793, -), ADediting_1515909(160026804, -), ADediting_1515910(160026878, -), ADediting_1515911(160026927, -), ADediting_1515912(160026954, -), ADediting_1515913(160027043, -), ADediting_1515914(160027053, -), ADediting_1515915(160027066, -), ADediting_1515916(160027072, -), ADediting_1515917(160027097, -), |
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RNA editing positional annotations for PIGM using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_36569 | chr1_160026582_- | UTR3 |
| ADediting_36570 | chr1_160026596_- | UTR3 |
| ADediting_36571 | chr1_160026664_- | UTR3 |
| ADediting_36572 | chr1_160026673_- | UTR3 |
| ADediting_36573 | chr1_160026706_- | UTR3 |
| ADediting_36574 | chr1_160026719_- | UTR3 |
| ADediting_36575 | chr1_160026728_- | UTR3 |
| ADediting_36576 | chr1_160026741_- | UTR3 |
| ADediting_36577 | chr1_160026745_- | UTR3 |
| ADediting_36578 | chr1_160026746_- | UTR3 |
| ADediting_36579 | chr1_160026752_- | UTR3 |
| ADediting_36580 | chr1_160026779_- | UTR3 |
| ADediting_36581 | chr1_160026785_- | UTR3 |
| ADediting_36582 | chr1_160026788_- | UTR3 |
| ADediting_36583 | chr1_160026800_- | UTR3 |
| ADediting_36584 | chr1_160026817_- | UTR3 |
| ADediting_36585 | chr1_160026819_- | UTR3 |
| ADediting_36586 | chr1_160026884_- | UTR3 |
| ADediting_36587 | chr1_160026896_- | UTR3 |
| ADediting_36588 | chr1_160026901_- | UTR3 |
| ADediting_36589 | chr1_160026906_- | UTR3 |
| ADediting_36590 | chr1_160026914_- | UTR3 |
| ADediting_36591 | chr1_160026920_- | UTR3 |
| ADediting_36592 | chr1_160026921_- | UTR3 |
| ADediting_36593 | chr1_160026940_- | UTR3 |
| ADediting_36594 | chr1_160026944_- | UTR3 |
| ADediting_36595 | chr1_160026966_- | UTR3 |
| ADediting_36596 | chr1_160026967_- | UTR3 |
| ADediting_36597 | chr1_160026972_- | UTR3 |
| ADediting_36598 | chr1_160026980_- | UTR3 |
| ADediting_36599 | chr1_160026989_- | UTR3 |
| ADediting_36600 | chr1_160026992_- | UTR3 |
| ADediting_36601 | chr1_160026994_- | UTR3 |
| ADediting_36602 | chr1_160027015_- | UTR3 |
| ADediting_36603 | chr1_160027017_- | UTR3 |
| ADediting_36604 | chr1_160027019_- | UTR3 |
| ADediting_36605 | chr1_160027062_- | UTR3 |
| ADediting_36606 | chr1_160027071_- | UTR3 |
| ADediting_36607 | chr1_160027088_- | UTR3 |
| ADediting_36608 | chr1_160027089_- | UTR3 |
| ADediting_36609 | chr1_160027091_- | UTR3 |
| ADediting_36610 | chr1_160029473_- | UTR3 |
| ADediting_36611 | chr1_160029538_- | UTR3 |
| ADediting_36612 | chr1_160029561_- | UTR3 |
| ADediting_36613 | chr1_160029864_- | UTR3 |
| ADediting_36614 | chr1_160029898_- | UTR3 |
| ADediting_36615 | chr1_160029899_- | UTR3 |
| ADediting_36616 | chr1_160030000_- | UTR3 |
| ADediting_1515905 | chr1_160026647_- | UTR3 |
| ADediting_1515906 | chr1_160026657_- | UTR3 |
| ADediting_1515907 | chr1_160026704_- | UTR3 |
| ADediting_1515908 | chr1_160026793_- | UTR3 |
| ADediting_1515909 | chr1_160026804_- | UTR3 |
| ADediting_1515910 | chr1_160026878_- | UTR3 |
| ADediting_1515911 | chr1_160026927_- | UTR3 |
| ADediting_1515912 | chr1_160026954_- | UTR3 |
| ADediting_1515913 | chr1_160027043_- | UTR3 |
| ADediting_1515914 | chr1_160027053_- | UTR3 |
| ADediting_1515915 | chr1_160027066_- | UTR3 |
| ADediting_1515916 | chr1_160027072_- | UTR3 |
| ADediting_1515917 | chr1_160027097_- | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_36569 | chr1_160026582_- | SINE | Alu | Name=AluJr |
| ADediting_36570 | chr1_160026596_- | SINE | Alu | Name=AluJr |
| ADediting_36571 | chr1_160026664_- | SINE | Alu | Name=AluJr |
| ADediting_36572 | chr1_160026673_- | SINE | Alu | Name=AluJr |
| ADediting_36573 | chr1_160026706_- | SINE | Alu | Name=AluJr |
| ADediting_36574 | chr1_160026719_- | SINE | Alu | Name=AluJr |
| ADediting_36575 | chr1_160026728_- | SINE | Alu | Name=AluJr |
| ADediting_36576 | chr1_160026741_- | SINE | Alu | Name=AluJr |
| ADediting_36577 | chr1_160026745_- | SINE | Alu | Name=AluJr |
| ADediting_36578 | chr1_160026746_- | SINE | Alu | Name=AluJr |
| ADediting_36579 | chr1_160026752_- | SINE | Alu | Name=AluJr |
| ADediting_36580 | chr1_160026779_- | SINE | Alu | Name=AluJr |
| ADediting_36581 | chr1_160026785_- | SINE | Alu | Name=AluJr |
| ADediting_36582 | chr1_160026788_- | SINE | Alu | Name=AluJr |
| ADediting_36583 | chr1_160026800_- | SINE | Alu | Name=AluJr |
| ADediting_36584 | chr1_160026817_- | SINE | Alu | Name=AluJr |
| ADediting_36585 | chr1_160026819_- | SINE | Alu | Name=AluJr |
| ADediting_36586 | chr1_160026884_- | SINE | Alu | Name=AluJr4 |
| ADediting_36587 | chr1_160026896_- | SINE | Alu | Name=AluJr4 |
| ADediting_36588 | chr1_160026901_- | SINE | Alu | Name=AluJr4 |
| ADediting_36589 | chr1_160026906_- | SINE | Alu | Name=AluJr4 |
| ADediting_36590 | chr1_160026914_- | SINE | Alu | Name=AluJr4 |
| ADediting_36591 | chr1_160026920_- | SINE | Alu | Name=AluJr4 |
| ADediting_36592 | chr1_160026921_- | SINE | Alu | Name=AluJr4 |
| ADediting_36593 | chr1_160026940_- | SINE | Alu | Name=AluJr4 |
| ADediting_36594 | chr1_160026944_- | SINE | Alu | Name=AluJr4 |
| ADediting_36595 | chr1_160026966_- | SINE | Alu | Name=AluJr4 |
| ADediting_36596 | chr1_160026967_- | SINE | Alu | Name=AluJr4 |
| ADediting_36597 | chr1_160026972_- | SINE | Alu | Name=AluJr4 |
| ADediting_36598 | chr1_160026980_- | SINE | Alu | Name=AluJr4 |
| ADediting_36599 | chr1_160026989_- | SINE | Alu | Name=AluJr4 |
| ADediting_36600 | chr1_160026992_- | SINE | Alu | Name=AluJr4 |
| ADediting_36601 | chr1_160026994_- | SINE | Alu | Name=AluJr4 |
| ADediting_36602 | chr1_160027015_- | SINE | Alu | Name=AluJr4 |
| ADediting_36603 | chr1_160027017_- | SINE | Alu | Name=AluJr4 |
| ADediting_36604 | chr1_160027019_- | SINE | Alu | Name=AluJr4 |
| ADediting_36605 | chr1_160027062_- | SINE | Alu | Name=AluJr4 |
| ADediting_36606 | chr1_160027071_- | SINE | Alu | Name=AluJr4 |
| ADediting_36607 | chr1_160027088_- | SINE | Alu | Name=AluJr4 |
| ADediting_36608 | chr1_160027089_- | SINE | Alu | Name=AluJr4 |
| ADediting_36609 | chr1_160027091_- | SINE | Alu | Name=AluJr4 |
| ADediting_36610 | chr1_160029473_- | SINE | Alu | Name=AluY |
| ADediting_36611 | chr1_160029538_- | SINE | Alu | Name=AluY |
| ADediting_36612 | chr1_160029561_- | SINE | Alu | Name=AluY |
| ADediting_36613 | chr1_160029864_- | SINE | Alu | Name=AluJr |
| ADediting_36614 | chr1_160029898_- | SINE | Alu | Name=AluJr |
| ADediting_36615 | chr1_160029899_- | SINE | Alu | Name=AluJr |
| ADediting_36616 | chr1_160030000_- | SINE | Alu | Name=AluJr |
| ADediting_1515905 | chr1_160026647_- | SINE | Alu | Name=AluJr |
| ADediting_1515906 | chr1_160026657_- | SINE | Alu | Name=AluJr |
| ADediting_1515907 | chr1_160026704_- | SINE | Alu | Name=AluJr |
| ADediting_1515908 | chr1_160026793_- | SINE | Alu | Name=AluJr |
| ADediting_1515909 | chr1_160026804_- | SINE | Alu | Name=AluJr |
| ADediting_1515910 | chr1_160026878_- | SINE | Alu | Name=AluJr4 |
| ADediting_1515911 | chr1_160026927_- | SINE | Alu | Name=AluJr4 |
| ADediting_1515912 | chr1_160026954_- | SINE | Alu | Name=AluJr4 |
| ADediting_1515913 | chr1_160027043_- | SINE | Alu | Name=AluJr4 |
| ADediting_1515914 | chr1_160027053_- | SINE | Alu | Name=AluJr4 |
| ADediting_1515915 | chr1_160027066_- | SINE | Alu | Name=AluJr4 |
| ADediting_1515916 | chr1_160027072_- | SINE | Alu | Name=AluJr4 |
| ADediting_1515917 | chr1_160027097_- | SINE | Alu | Name=AluJr4 |
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RNA A-to-I editing events in the alternative splicing sites for PIGM |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PIGM |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for PIGM |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for PIGM |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1515905 | chr1_160026647_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-3120-3p | chr1 | 160026646 | 160026652 | 7mer-m8 | 160026645 | 160026665 | 145 | -16.03 |
| ADediting_1515906 | chr1_160026657_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-340-3p | chr1 | 160026657 | 160026663 | 7mer-m8 | 160026656 | 160026677 | 141 | -15.89 |
| ADediting_1515906 | chr1_160026657_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6827-3p | chr1 | 160026657 | 160026663 | 7mer-m8 | 160026656 | 160026676 | 147 | -16.55 |
| ADediting_1515909 | chr1_160026804_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-1273c | chr1 | 160026803 | 160026809 | 7mer-m8 | 160026802 | 160026823 | 164 | -22.02 |
| ADediting_1515909 | chr1_160026804_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4486 | chr1 | 160026799 | 160026805 | 7mer-m8 | 160026798 | 160026814 | 145 | -19.8 |
| ADediting_1515913 | chr1_160027043_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-1247-5p | chr1 | 160027040 | 160027047 | 8mer-1a | 160027040 | 160027063 | 145 | -25.23 |
| ADediting_1515915 | chr1_160027066_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-1913 | chr1 | 160027061 | 160027067 | 7mer-m8 | 160027060 | 160027083 | 141 | -21.97 |
| ADediting_1515916 | chr1_160027072_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6736-3p | chr1 | 160027066 | 160027073 | 8mer-1a | 160027066 | 160027086 | 146 | -18.17 |
| ADediting_1515917 | chr1_160027097_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-3622a-5p | chr1 | 160027091 | 160027098 | 8mer-1a | 160027091 | 160027112 | 147 | -18.4 |
| ADediting_36570 | chr1_160026596_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-3189-3p | chr1 | 160026595 | 160026601 | 7mer-m8 | 160026594 | 160026616 | 157 | -24.27 |
| ADediting_36570 | chr1_160026596_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6813-3p | chr1 | 160026594 | 160026600 | 7mer-m8 | 160026593 | 160026613 | 140 | -12.45 |
| ADediting_36573 | chr1_160026706_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4746-5p | chr1 | 160026706 | 160026712 | 7mer-m8 | 160026705 | 160026727 | 150 | -21.67 |
| ADediting_36575 | chr1_160026728_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-151a-5p | chr1 | 160026728 | 160026734 | 7mer-m8 | 160026727 | 160026747 | 140 | -17.68 |
| ADediting_36575 | chr1_160026728_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-151b | chr1 | 160026728 | 160026734 | 7mer-m8 | 160026727 | 160026744 | 140 | -16.44 |
| ADediting_36575 | chr1_160026728_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6089 | chr1 | 160026723 | 160026729 | 7mer-m8 | 160026722 | 160026744 | 164 | -38.15 |
| ADediting_36576 | chr1_160026741_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-1255b-2-3p | chr1 | 160026740 | 160026746 | 7mer-m8 | 160026739 | 160026760 | 140 | -10.95 |
| ADediting_36576 | chr1_160026741_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6816-3p | chr1 | 160026736 | 160026742 | 7mer-m8 | 160026735 | 160026755 | 142 | -17.11 |
| ADediting_36577 | chr1_160026745_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-1199-5p | chr1 | 160026745 | 160026751 | 7mer-m8 | 160026744 | 160026763 | 152 | -25.86 |
| ADediting_36577 | chr1_160026745_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-3622a-3p | chr1 | 160026741 | 160026748 | 8mer-1a | 160026741 | 160026763 | 146 | -19.8 |
| ADediting_36577 | chr1_160026745_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-3622b-3p | chr1 | 160026741 | 160026748 | 8mer-1a | 160026741 | 160026761 | 151 | -20.34 |
| ADediting_36577 | chr1_160026745_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6751-3p | chr1 | 160026745 | 160026751 | 7mer-m8 | 160026744 | 160026764 | 145 | -13.99 |
| ADediting_36579 | chr1_160026752_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-1247-3p | chr1 | 160026750 | 160026756 | 7mer-m8 | 160026749 | 160026769 | 144 | -27.75 |
| ADediting_36579 | chr1_160026752_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-3940-3p | chr1 | 160026748 | 160026754 | 7mer-m8 | 160026747 | 160026768 | 140 | -15 |
| ADediting_36580 | chr1_160026779_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4796-5p | chr1 | 160026776 | 160026783 | 8mer-1a | 160026776 | 160026797 | 169 | -26.21 |
| ADediting_36581 | chr1_160026785_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-324-3p | chr1 | 160026784 | 160026790 | 7mer-m8 | 160026783 | 160026805 | 148 | -24.11 |
| ADediting_36583 | chr1_160026800_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-3940-3p | chr1 | 160026796 | 160026802 | 7mer-m8 | 160026795 | 160026816 | 151 | -21.55 |
| ADediting_36585 | chr1_160026819_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4421 | chr1 | 160026817 | 160026824 | 8mer-1a | 160026817 | 160026838 | 159 | -17.38 |
| ADediting_36585 | chr1_160026819_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4793-5p | chr1 | 160026815 | 160026821 | 7mer-m8 | 160026814 | 160026838 | 153 | -20.63 |
| ADediting_36585 | chr1_160026819_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-5699-3p | chr1 | 160026817 | 160026824 | 8mer-1a | 160026817 | 160026838 | 141 | -16.73 |
| ADediting_36587 | chr1_160026896_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4743-5p | chr1 | 160026893 | 160026899 | 7mer-m8 | 160026892 | 160026911 | 147 | -26.03 |
| ADediting_36591 | chr1_160026920_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-7705 | chr1 | 160026916 | 160026922 | 7mer-m8 | 160026915 | 160026937 | 152 | -14.56 |
| ADediting_36595 | chr1_160026966_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-1224-3p | chr1 | 160026960 | 160026967 | 8mer-1a | 160026960 | 160026980 | 157 | -25.4 |
| ADediting_36595 | chr1_160026966_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6787-3p | chr1 | 160026966 | 160026972 | 7mer-m8 | 160026965 | 160026986 | 143 | -19.67 |
| ADediting_36596 | chr1_160026967_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-508-5p | chr1 | 160026964 | 160026970 | 7mer-m8 | 160026963 | 160026985 | 140 | -16.74 |
| ADediting_36596 | chr1_160026967_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-766-3p | chr1 | 160026965 | 160026971 | 7mer-m8 | 160026964 | 160026986 | 149 | -22.84 |
| ADediting_36597 | chr1_160026972_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-150-5p | chr1 | 160026972 | 160026978 | 7mer-m8 | 160026971 | 160026990 | 142 | -16.26 |
| ADediting_36597 | chr1_160026972_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6778-3p | chr1 | 160026970 | 160026976 | 7mer-m8 | 160026969 | 160026992 | 142 | -17 |
| ADediting_36598 | chr1_160026980_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-15a-5p | chr1 | 160026978 | 160026984 | 7mer-m8 | 160026977 | 160026998 | 160 | -17.96 |
| ADediting_36598 | chr1_160026980_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-15b-5p | chr1 | 160026978 | 160026984 | 7mer-m8 | 160026977 | 160026998 | 155 | -14.15 |
| ADediting_36598 | chr1_160026980_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-16-5p | chr1 | 160026978 | 160026984 | 7mer-m8 | 160026977 | 160026998 | 152 | -15.02 |
| ADediting_36598 | chr1_160026980_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-195-5p | chr1 | 160026978 | 160026984 | 7mer-m8 | 160026977 | 160026997 | 145 | -14.15 |
| ADediting_36598 | chr1_160026980_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-383-3p | chr1 | 160026980 | 160026986 | 7mer-m8 | 160026979 | 160026997 | 140 | -10.92 |
| ADediting_36598 | chr1_160026980_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-424-5p | chr1 | 160026978 | 160026984 | 7mer-m8 | 160026977 | 160026998 | 168 | -14.92 |
| ADediting_36598 | chr1_160026980_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-497-5p | chr1 | 160026978 | 160026984 | 7mer-m8 | 160026977 | 160026997 | 155 | -15.87 |
| ADediting_36598 | chr1_160026980_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6838-5p | chr1 | 160026978 | 160026984 | 7mer-m8 | 160026977 | 160026998 | 142 | -11.8 |
| ADediting_36600 | chr1_160026992_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6844 | chr1 | 160026990 | 160026997 | 8mer-1a | 160026990 | 160027010 | 140 | -10.74 |
| ADediting_36602 | chr1_160027015_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4716-5p | chr1 | 160027014 | 160027020 | 7mer-m8 | 160027013 | 160027035 | 146 | -14.19 |
| ADediting_36602 | chr1_160027015_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6511a-3p | chr1 | 160027009 | 160027016 | 8mer-1a | 160027009 | 160027031 | 147 | -17.38 |
| ADediting_36602 | chr1_160027015_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6511b-3p | chr1 | 160027009 | 160027016 | 8mer-1a | 160027009 | 160027032 | 144 | -15.84 |
| ADediting_36606 | chr1_160027071_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-150-5p | chr1 | 160027071 | 160027077 | 7mer-m8 | 160027070 | 160027092 | 145 | -13.63 |
| ADediting_36606 | chr1_160027071_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6778-3p | chr1 | 160027069 | 160027075 | 7mer-m8 | 160027068 | 160027089 | 154 | -16.64 |
| ADediting_36607 | chr1_160027088_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-625-3p | chr1 | 160027087 | 160027093 | 7mer-m8 | 160027086 | 160027107 | 140 | -15.05 |
| ADediting_36607 | chr1_160027088_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-8052 | chr1 | 160027083 | 160027089 | 7mer-1a | 160027083 | 160027101 | 152 | -27.21 |
| ADediting_36608 | chr1_160027089_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-638 | chr1 | 160027083 | 160027089 | 7mer-1a | 160027083 | 160027107 | 143 | -27.5 |
| ADediting_36609 | chr1_160027091_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-10399-5p | chr1 | 160027087 | 160027093 | 7mer-m8 | 160027086 | 160027107 | 144 | -10.56 |
| ADediting_36609 | chr1_160027091_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6504-3p | chr1 | 160027087 | 160027093 | 7mer-m8 | 160027086 | 160027107 | 152 | -13.9 |
| ADediting_36609 | chr1_160027091_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-7151-3p | chr1 | 160027088 | 160027095 | 8mer-1a | 160027088 | 160027108 | 150 | -15.67 |
| ADediting_36610 | chr1_160029473_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-140-3p | chr1 | 160029471 | 160029477 | 7mer-m8 | 160029470 | 160029489 | 149 | -23.87 |
| ADediting_36610 | chr1_160029473_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-197-3p | chr1 | 160029469 | 160029475 | 7mer-m8 | 160029468 | 160029489 | 166 | -28.15 |
| ADediting_36610 | chr1_160029473_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6511a-3p | chr1 | 160029468 | 160029474 | 7mer-m8 | 160029467 | 160029488 | 160 | -22.22 |
| ADediting_36610 | chr1_160029473_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6511b-3p | chr1 | 160029468 | 160029474 | 7mer-m8 | 160029467 | 160029489 | 164 | -25.07 |
| ADediting_36611 | chr1_160029538_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-140-3p | chr1 | 160029536 | 160029542 | 7mer-m8 | 160029535 | 160029555 | 155 | -27.5 |
| ADediting_36613 | chr1_160029864_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-140-3p | chr1 | 160029862 | 160029868 | 7mer-m8 | 160029861 | 160029881 | 171 | -28.57 |
| ADediting_36616 | chr1_160030000_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-140-3p | chr1 | 160029998 | 160030004 | 7mer-m8 | 160029997 | 160030017 | 163 | -23.03 |
| ADediting_36616 | chr1_160030000_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4786-5p | chr1 | 160029994 | 160030001 | 8mer-1a | 160029994 | 160030016 | 143 | -23.36 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1515906 | chr1_160026657_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6790-3p | chr1 | 160026653 | 160026659 | 7mer-m8 | 160026652 | 160026672 | 142 | -13.92 |
| ADediting_1515908 | chr1_160026793_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-508-5p | chr1 | 160026791 | 160026797 | 7mer-m8 | 160026790 | 160026812 | 150 | -20.11 |
| ADediting_1515908 | chr1_160026793_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6512-3p | chr1 | 160026793 | 160026799 | 7mer-m8 | 160026792 | 160026813 | 140 | -17.07 |
| ADediting_1515908 | chr1_160026793_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6720-5p | chr1 | 160026793 | 160026799 | 7mer-m8 | 160026792 | 160026813 | 152 | -27.67 |
| ADediting_1515908 | chr1_160026793_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-766-3p | chr1 | 160026792 | 160026798 | 7mer-m8 | 160026791 | 160026812 | 145 | -18.73 |
| ADediting_1515909 | chr1_160026804_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-1262 | chr1 | 160026800 | 160026806 | 7mer-m8 | 160026799 | 160026820 | 142 | -15.16 |
| ADediting_1515909 | chr1_160026804_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4504 | chr1 | 160026803 | 160026809 | 7mer-m8 | 160026802 | 160026822 | 146 | -12.09 |
| ADediting_1515909 | chr1_160026804_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4701-3p | chr1 | 160026800 | 160026806 | 7mer-m8 | 160026799 | 160026818 | 144 | -16.02 |
| ADediting_1515909 | chr1_160026804_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6736-5p | chr1 | 160026800 | 160026806 | 7mer-m8 | 160026799 | 160026821 | 146 | -21.58 |
| ADediting_1515909 | chr1_160026804_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6776-5p | chr1 | 160026799 | 160026805 | 7mer-m8 | 160026798 | 160026817 | 144 | -18.02 |
| ADediting_1515912 | chr1_160026954_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6718-5p | chr1 | 160026952 | 160026958 | 7mer-m8 | 160026951 | 160026971 | 141 | -14.39 |
| ADediting_1515913 | chr1_160027043_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6748-3p | chr1 | 160027040 | 160027047 | 8mer-1a | 160027040 | 160027063 | 145 | -24.09 |
| ADediting_1515914 | chr1_160027053_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-1245a | chr1 | 160027051 | 160027057 | 7mer-m8 | 160027050 | 160027070 | 149 | -18.4 |
| ADediting_1515915 | chr1_160027066_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6787-3p | chr1 | 160027065 | 160027071 | 7mer-m8 | 160027064 | 160027085 | 143 | -19.58 |
| ADediting_36569 | chr1_160026582_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-3116 | chr1 | 160026579 | 160026585 | 7mer-m8 | 160026578 | 160026600 | 151 | -19.7 |
| ADediting_36569 | chr1_160026582_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6128 | chr1 | 160026581 | 160026587 | 7mer-m8 | 160026580 | 160026598 | 142 | -11.44 |
| ADediting_36571 | chr1_160026664_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4684-5p | chr1 | 160026660 | 160026666 | 7mer-m8 | 160026659 | 160026680 | 143 | -8.1 |
| ADediting_36571 | chr1_160026664_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-519a-2-5p | chr1 | 160026660 | 160026667 | 8mer-1a | 160026660 | 160026680 | 153 | -13.81 |
| ADediting_36571 | chr1_160026664_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-520b-5p | chr1 | 160026660 | 160026667 | 8mer-1a | 160026660 | 160026680 | 153 | -13.81 |
| ADediting_36574 | chr1_160026719_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-12126 | chr1 | 160026716 | 160026723 | 8mer-1a | 160026716 | 160026739 | 147 | -12.83 |
| ADediting_36574 | chr1_160026719_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-887-5p | chr1 | 160026719 | 160026725 | 7mer-m8 | 160026718 | 160026737 | 143 | -18.54 |
| ADediting_36575 | chr1_160026728_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-3929 | chr1 | 160026724 | 160026730 | 7mer-m8 | 160026723 | 160026745 | 153 | -23.25 |
| ADediting_36575 | chr1_160026728_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4478 | chr1 | 160026724 | 160026730 | 7mer-m8 | 160026723 | 160026737 | 152 | -25.68 |
| ADediting_36575 | chr1_160026728_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4689 | chr1 | 160026728 | 160026734 | 7mer-m8 | 160026727 | 160026748 | 147 | -17.42 |
| ADediting_36575 | chr1_160026728_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-485-5p | chr1 | 160026723 | 160026729 | 7mer-m8 | 160026722 | 160026743 | 152 | -14.58 |
| ADediting_36575 | chr1_160026728_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6858-5p | chr1 | 160026728 | 160026734 | 7mer-m8 | 160026727 | 160026748 | 149 | -19.95 |
| ADediting_36575 | chr1_160026728_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-7160-5p | chr1 | 160026726 | 160026732 | 7mer-m8 | 160026725 | 160026745 | 140 | -15.71 |
| ADediting_36583 | chr1_160026800_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-1262 | chr1 | 160026800 | 160026806 | 7mer-m8 | 160026799 | 160026820 | 142 | -15.16 |
| ADediting_36583 | chr1_160026800_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4701-3p | chr1 | 160026800 | 160026806 | 7mer-m8 | 160026799 | 160026818 | 144 | -16.02 |
| ADediting_36583 | chr1_160026800_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-661 | chr1 | 160026797 | 160026803 | 7mer-m8 | 160026796 | 160026819 | 149 | -21.72 |
| ADediting_36583 | chr1_160026800_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6736-5p | chr1 | 160026800 | 160026806 | 7mer-m8 | 160026799 | 160026821 | 146 | -21.58 |
| ADediting_36583 | chr1_160026800_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6742-3p | chr1 | 160026798 | 160026804 | 7mer-m8 | 160026797 | 160026816 | 140 | -13.49 |
| ADediting_36583 | chr1_160026800_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6776-5p | chr1 | 160026799 | 160026805 | 7mer-m8 | 160026798 | 160026817 | 144 | -18.02 |
| ADediting_36586 | chr1_160026884_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-5691 | chr1 | 160026878 | 160026885 | 8mer-1a | 160026878 | 160026898 | 147 | -19.02 |
| ADediting_36586 | chr1_160026884_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6773-3p | chr1 | 160026882 | 160026889 | 8mer-1a | 160026882 | 160026903 | 142 | -15.63 |
| ADediting_36586 | chr1_160026884_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6805-3p | chr1 | 160026878 | 160026885 | 8mer-1a | 160026878 | 160026900 | 154 | -21.46 |
| ADediting_36587 | chr1_160026896_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-3652 | chr1 | 160026893 | 160026899 | 7mer-m8 | 160026892 | 160026911 | 148 | -20.61 |
| ADediting_36588 | chr1_160026901_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-143-5p | chr1 | 160026900 | 160026906 | 7mer-m8 | 160026899 | 160026921 | 155 | -20.99 |
| ADediting_36589 | chr1_160026906_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-5693 | chr1 | 160026903 | 160026909 | 7mer-m8 | 160026902 | 160026923 | 145 | -16.4 |
| ADediting_36589 | chr1_160026906_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-891a-3p | chr1 | 160026905 | 160026911 | 7mer-m8 | 160026904 | 160026926 | 152 | -19.08 |
| ADediting_36594 | chr1_160026944_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-10400-3p | chr1 | 160026944 | 160026950 | 7mer-m8 | 160026943 | 160026964 | 140 | -22.16 |
| ADediting_36594 | chr1_160026944_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-1343-3p | chr1 | 160026940 | 160026947 | 8mer-1a | 160026940 | 160026961 | 140 | -16.15 |
| ADediting_36594 | chr1_160026944_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4674 | chr1 | 160026944 | 160026950 | 7mer-m8 | 160026943 | 160026963 | 147 | -23.95 |
| ADediting_36594 | chr1_160026944_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6783-3p | chr1 | 160026940 | 160026947 | 8mer-1a | 160026940 | 160026961 | 151 | -24.97 |
| ADediting_36594 | chr1_160026944_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-939-3p | chr1 | 160026941 | 160026948 | 8mer-1a | 160026941 | 160026963 | 148 | -23.24 |
| ADediting_36598 | chr1_160026980_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-562 | chr1 | 160026977 | 160026983 | 7mer-m8 | 160026976 | 160026995 | 142 | -7.36 |
| ADediting_36598 | chr1_160026980_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-5697 | chr1 | 160026976 | 160026982 | 7mer-m8 | 160026975 | 160026996 | 141 | -11.14 |
| ADediting_36605 | chr1_160027062_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-1976 | chr1 | 160027058 | 160027064 | 7mer-m8 | 160027057 | 160027077 | 153 | -25.79 |
| ADediting_36605 | chr1_160027062_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-660-3p | chr1 | 160027056 | 160027063 | 8mer-1a | 160027056 | 160027075 | 144 | -16.11 |
| ADediting_36605 | chr1_160027062_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-6747-3p | chr1 | 160027059 | 160027066 | 8mer-1a | 160027059 | 160027080 | 144 | -22.69 |
| ADediting_36607 | chr1_160027088_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-5089-5p | chr1 | 160027082 | 160027089 | 8mer-1a | 160027082 | 160027101 | 142 | -13.32 |
| ADediting_36610 | chr1_160029473_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-7151-3p | chr1 | 160029473 | 160029479 | 7mer-m8 | 160029472 | 160029492 | 145 | -21.21 |
| ADediting_36611 | chr1_160029538_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-7151-3p | chr1 | 160029538 | 160029544 | 7mer-m8 | 160029537 | 160029557 | 140 | -18.95 |
| ADediting_36612 | chr1_160029561_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4735-5p | chr1 | 160029560 | 160029566 | 7mer-m8 | 160029559 | 160029580 | 140 | -4.28 |
| ADediting_36616 | chr1_160030000_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-7151-3p | chr1 | 160030000 | 160030006 | 7mer-m8 | 160029999 | 160030015 | 145 | -22.91 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-589-3p | chr1 | 160025373 | 160025379 | 7mer-m8 | 160025372 | 160025394 | 152 | -15.81 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-589-5p | chr1 | 160027151 | 160027157 | 7mer-m8 | 160027150 | 160027171 | 147 | -15.46 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4477b | chr1 | 160026100 | 160026107 | 8mer-1a | 160026100 | 160026121 | 142 | -9.9 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4477b | chr1 | 160027169 | 160027176 | 8mer-1a | 160027169 | 160027190 | 156 | -14.62 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4477b | chr1 | 160028755 | 160028761 | 7mer-m8 | 160028754 | 160028775 | 144 | -11.07 |
| ADediting_286380 | chr11_79422188_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-5579-3p | chr1 | 160030141 | 160030147 | 7mer-m8 | 160030140 | 160030161 | 146 | -14.59 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4775 | chr1 | 160026380 | 160026386 | 7mer-m8 | 160026379 | 160026400 | 147 | -8.25 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4775 | chr1 | 160029005 | 160029012 | 8mer-1a | 160029005 | 160029026 | 163 | -8.6 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-5585-3p | chr1 | 160026532 | 160026538 | 7mer-m8 | 160026531 | 160026551 | 141 | -10.58 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-589-3p | chr1 | 160025110 | 160025116 | 7mer-m8 | 160025109 | 160025132 | 142 | -15.38 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-589-3p | chr1 | 160027545 | 160027552 | 8mer-1a | 160027545 | 160027568 | 150 | -15.67 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-381-3p | chr1 | 160030418 | 160030424 | 7mer-m8 | 160030417 | 160030437 | 149 | -12.46 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-381-3p | chr1 | 160030418 | 160030424 | 7mer-m8 | 160030417 | 160030437 | 149 | -12.46 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-641 | chr1 | 160030095 | 160030101 | 7mer-1a | 160030095 | 160030117 | 146 | -17.35 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-641 | chr1 | 160030107 | 160030113 | 7mer-1a | 160030095 | 160030117 | 146 | -17.35 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-641 | chr1 | 160030095 | 160030101 | 7mer-1a | 160030095 | 160030117 | 146 | -17.35 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-641 | chr1 | 160030107 | 160030113 | 7mer-1a | 160030095 | 160030117 | 146 | -17.35 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000143315.8 | ENST00000368090.5 | PIGM-201 | hsa-miR-4775 | chr1 | 160027189 | 160027195 | 7mer-m8 | 160027188 | 160027210 | 150 | -6.5 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for PIGM |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000368090.5 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_36569 | ENST00000368090.5 | chr1_160026582_- | 5409 | -1998.07 | -1998.77 | -2077.27 |
| ADediting_36570 | ENST00000368090.5 | chr1_160026596_- | 5395 | -1998.47 | -1998.77 | -2077.27 |
| ADediting_1515905 | ENST00000368090.5 | chr1_160026647_- | 5344 | -2002.97 | -1998.77 | -2077.27 |
| ADediting_1515906 | ENST00000368090.5 | chr1_160026657_- | 5334 | -2004.07 | -1998.77 | -2077.27 |
| ADediting_36571 | ENST00000368090.5 | chr1_160026664_- | 5327 | -1998.47 | -1998.77 | -2077.27 |
| ADediting_36572 | ENST00000368090.5 | chr1_160026673_- | 5318 | -2000.57 | -1998.77 | -2077.27 |
| ADediting_1515907 | ENST00000368090.5 | chr1_160026704_- | 5287 | -1998.07 | -1998.77 | -2077.27 |
| ADediting_36573 | ENST00000368090.5 | chr1_160026706_- | 5285 | -1999.07 | -1998.77 | -2077.27 |
| ADediting_36574 | ENST00000368090.5 | chr1_160026719_- | 5272 | -1999.37 | -1998.77 | -2077.27 |
| ADediting_36575 | ENST00000368090.5 | chr1_160026728_- | 5263 | -1998.07 | -1998.77 | -2077.27 |
| ADediting_36576 | ENST00000368090.5 | chr1_160026741_- | 5250 | -2005.47 | -1998.77 | -2077.27 |
| ADediting_36577 | ENST00000368090.5 | chr1_160026745_- | 5246 | -1998.47 | -1998.77 | -2077.27 |
| ADediting_36578 | ENST00000368090.5 | chr1_160026746_- | 5245 | -1998.47 | -1998.77 | -2077.27 |
| ADediting_36579 | ENST00000368090.5 | chr1_160026752_- | 5239 | -2002.67 | -1998.77 | -2077.27 |
| ADediting_36580 | ENST00000368090.5 | chr1_160026779_- | 5212 | -1997.77 | -1998.77 | -2077.27 |
| ADediting_36581 | ENST00000368090.5 | chr1_160026785_- | 5206 | -2005.37 | -1998.77 | -2077.27 |
| ADediting_36582 | ENST00000368090.5 | chr1_160026788_- | 5203 | -1998.07 | -1998.77 | -2077.27 |
| ADediting_1515908 | ENST00000368090.5 | chr1_160026793_- | 5198 | -1997.87 | -1998.77 | -2077.27 |
| ADediting_36583 | ENST00000368090.5 | chr1_160026800_- | 5191 | -1998.07 | -1998.77 | -2077.27 |
| ADediting_1515909 | ENST00000368090.5 | chr1_160026804_- | 5187 | -1998.37 | -1998.77 | -2077.27 |
| ADediting_36584 | ENST00000368090.5 | chr1_160026817_- | 5174 | -2005.47 | -1998.77 | -2077.27 |
| ADediting_36585 | ENST00000368090.5 | chr1_160026819_- | 5172 | -1998.47 | -1998.77 | -2077.27 |
| ADediting_1515910 | ENST00000368090.5 | chr1_160026878_- | 5113 | -1998.77 | -1998.77 | -2077.27 |
| ADediting_36586 | ENST00000368090.5 | chr1_160026884_- | 5107 | -1997.97 | -1998.77 | -2077.27 |
| ADediting_36587 | ENST00000368090.5 | chr1_160026896_- | 5095 | -1998.07 | -1998.77 | -2077.27 |
| ADediting_36588 | ENST00000368090.5 | chr1_160026901_- | 5090 | -1998.37 | -1998.77 | -2077.27 |
| ADediting_36589 | ENST00000368090.5 | chr1_160026906_- | 5085 | -1999.07 | -1998.77 | -2077.27 |
| ADediting_36590 | ENST00000368090.5 | chr1_160026914_- | 5077 | -1999.07 | -1998.77 | -2077.27 |
| ADediting_36591 | ENST00000368090.5 | chr1_160026920_- | 5071 | -2005.47 | -1998.77 | -2077.27 |
| ADediting_36592 | ENST00000368090.5 | chr1_160026921_- | 5070 | -1997.87 | -1998.77 | -2077.27 |
| ADediting_1515911 | ENST00000368090.5 | chr1_160026927_- | 5064 | -2005.27 | -1998.77 | -2077.27 |
| ADediting_36593 | ENST00000368090.5 | chr1_160026940_- | 5051 | -2004.97 | -1998.77 | -2077.27 |
| ADediting_36594 | ENST00000368090.5 | chr1_160026944_- | 5047 | -2002.67 | -1998.77 | -2077.27 |
| ADediting_1515912 | ENST00000368090.5 | chr1_160026954_- | 5037 | -1998.37 | -1998.77 | -2077.27 |
| ADediting_36595 | ENST00000368090.5 | chr1_160026966_- | 5025 | -2000.77 | -1998.77 | -2077.27 |
| ADediting_36596 | ENST00000368090.5 | chr1_160026967_- | 5024 | -1998.77 | -1998.77 | -2077.27 |
| ADediting_36597 | ENST00000368090.5 | chr1_160026972_- | 5019 | -2002.37 | -1998.77 | -2077.27 |
| ADediting_36598 | ENST00000368090.5 | chr1_160026980_- | 5011 | -1998.77 | -1998.77 | -2077.27 |
| ADediting_36599 | ENST00000368090.5 | chr1_160026989_- | 5002 | -1998.77 | -1998.77 | -2077.27 |
| ADediting_36600 | ENST00000368090.5 | chr1_160026992_- | 4999 | -1998.77 | -1998.77 | -2077.27 |
| ADediting_36601 | ENST00000368090.5 | chr1_160026994_- | 4997 | -1998.77 | -1998.77 | -2077.27 |
| ADediting_36602 | ENST00000368090.5 | chr1_160027015_- | 4976 | -1999.77 | -1998.77 | -2077.27 |
| ADediting_36603 | ENST00000368090.5 | chr1_160027017_- | 4974 | -1998.37 | -1998.77 | -2077.27 |
| ADediting_36604 | ENST00000368090.5 | chr1_160027019_- | 4972 | -1998.77 | -1998.77 | -2077.27 |
| ADediting_1515913 | ENST00000368090.5 | chr1_160027043_- | 4948 | -2000.17 | -1998.77 | -2077.27 |
| ADediting_1515914 | ENST00000368090.5 | chr1_160027053_- | 4938 | -1998.57 | -1998.77 | -2077.27 |
| ADediting_36605 | ENST00000368090.5 | chr1_160027062_- | 4929 | -2002.17 | -1998.77 | -2077.27 |
| ADediting_1515915 | ENST00000368090.5 | chr1_160027066_- | 4925 | -2001.47 | -1998.77 | -2077.27 |
| ADediting_36606 | ENST00000368090.5 | chr1_160027071_- | 4920 | -2000.27 | -1998.77 | -2077.27 |
| ADediting_1515916 | ENST00000368090.5 | chr1_160027072_- | 4919 | -1998.37 | -1998.77 | -2077.27 |
| ADediting_36607 | ENST00000368090.5 | chr1_160027088_- | 4903 | -1999.77 | -1998.77 | -2077.27 |
| ADediting_36608 | ENST00000368090.5 | chr1_160027089_- | 4902 | -2001.17 | -1998.77 | -2077.27 |
| ADediting_36609 | ENST00000368090.5 | chr1_160027091_- | 4900 | -1998.97 | -1998.77 | -2077.27 |
| ADediting_1515917 | ENST00000368090.5 | chr1_160027097_- | 4894 | -1999.77 | -1998.77 | -2077.27 |
| ADediting_36610 | ENST00000368090.5 | chr1_160029473_- | 2518 | -1999.57 | -1998.77 | -2077.27 |
| ADediting_36611 | ENST00000368090.5 | chr1_160029538_- | 2453 | -2005.37 | -1998.77 | -2077.27 |
| ADediting_36612 | ENST00000368090.5 | chr1_160029561_- | 2430 | -1998.47 | -1998.77 | -2077.27 |
| ADediting_36613 | ENST00000368090.5 | chr1_160029864_- | 2127 | -1998.97 | -1998.77 | -2077.27 |
| ADediting_36614 | ENST00000368090.5 | chr1_160029898_- | 2093 | -1998.87 | -1998.77 | -2077.27 |
| ADediting_36615 | ENST00000368090.5 | chr1_160029899_- | 2092 | -1999.17 | -1998.77 | -2077.27 |
| ADediting_36616 | ENST00000368090.5 | chr1_160030000_- | 1991 | -1999.37 | -1998.77 | -2077.27 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for PIGM |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 3.51116896381565e-26 | 0.552568979093649 | 3.58349311131292e-27 | 0.56167603466757 | 1.60970188475765e-15 | 0.431917303490367 |
| AC | 3.45141915190915e-70 | 0.847559749624388 | 1.00360800185788e-38 | 0.703972110070562 | 1.4523581523925e-23 | 0.576733079234978 |
| PCC | 3.88621671885506e-33 | 0.7305235562508 | 5.78318809775859e-30 | 0.704538188624136 | 9.80036796627272e-05 | 0.278111675699368 |
| CER | 1.979847791016e-39 | 0.830427714916363 | 5.53181209542715e-21 | 0.671199372180429 | 0.0011879160930607 | 0.262234907586436 |
| TCX | 2.30195437920599e-15 | 0.588761921693861 | 0.244131642980991 | 0.0956811905749055 | 3.20097800337964e-20 | 0.66138171721451 |
| FP | 2.36395986729924e-22 | 0.645407556846902 | 5.08788733660755e-22 | 0.641472069164513 | 3.73418660305227e-17 | 0.576514536480075 |
| IFG | 2.16233422765925e-05 | 0.742203552147459 | 0.00148438341590444 | 0.601079040630196 | 0.000353335158297552 | 0.657667892361989 |
| PG | 1.60891323772289e-46 | 0.820294446144882 | 1.65849482507249e-22 | 0.636369334871065 | 0.0369306292094904 | 0.153120667938854 |
| STG | 4.81666056319752e-10 | 0.615081443152593 | 1.91604759455555e-06 | 0.492807410248749 | 2.34368936776617e-06 | 0.489138615632514 |
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Relation with AD stages for PIGM |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 0.000912366491311978 | 0.3146224377932 |
| TCX | 5.70945591854927e-09 | 0.52866476345718 |
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RelatedDrugs for PIGM |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PIGM |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| PIGM | C0282577 | Congenital Disorders of Glycosylation | 3 | GENOMICS_ENGLAND |
| PIGM | C0022333 | Jacksonian Seizure | 1 | CTD_human |
| PIGM | C0036572 | Seizures | 1 | CTD_human |
| PIGM | C0042487 | Venous Thrombosis | 1 | CTD_human |
| PIGM | C0149871 | Deep Vein Thrombosis | 1 | CTD_human |
| PIGM | C0149958 | Complex partial seizures | 1 | CTD_human |
| PIGM | C0234533 | Generalized seizures | 1 | CTD_human |
| PIGM | C0234535 | Seizures, Clonic | 1 | CTD_human |
| PIGM | C0270824 | Visual seizure | 1 | CTD_human |
| PIGM | C0270844 | Tonic Seizures | 1 | CTD_human |
| PIGM | C0270846 | Epileptic drop attack | 1 | CTD_human |
| PIGM | C0422850 | Seizures, Somatosensory | 1 | CTD_human |
| PIGM | C0422852 | Seizures, Auditory | 1 | CTD_human |
| PIGM | C0422853 | Olfactory seizure | 1 | CTD_human |
| PIGM | C0422854 | Gustatory seizure | 1 | CTD_human |
| PIGM | C0422855 | Vertiginous seizure | 1 | CTD_human |
| PIGM | C0494475 | Tonic - clonic seizures | 1 | CTD_human |
| PIGM | C0751056 | Non-epileptic convulsion | 1 | CTD_human |
| PIGM | C0751110 | Single Seizure | 1 | CTD_human |
| PIGM | C0751123 | Atonic Absence Seizures | 1 | CTD_human |
| PIGM | C0751494 | Convulsive Seizures | 1 | CTD_human |
| PIGM | C0751495 | Seizures, Focal | 1 | CTD_human |
| PIGM | C0751496 | Seizures, Sensory | 1 | CTD_human |
| PIGM | C3495874 | Nonepileptic Seizures | 1 | CTD_human |
| PIGM | C4048158 | Convulsions | 1 | CTD_human |
| PIGM | C4316903 | Absence Seizures | 1 | CTD_human |
| PIGM | C4317109 | Epileptic Seizures | 1 | CTD_human |
| PIGM | C4317123 | Myoclonic Seizures | 1 | CTD_human |
| PIGM | C4505436 | Generalized Absence Seizures | 1 | CTD_human |
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