ADeditome Logo

Home

Download

Statistics

Landscape

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for CTBP1-DT

check button Gene summary
Gene informationGene symbol

CTBP1-DT

Gene ID

92070

Gene nameCTBP1 divergent transcript
SynonymsC4orf42|CTBP1-AS1|CTBP1-AS2
Cytomap

4p16.3

Type of genencRNA
DescriptionCTBP1 antisense RNA 1 (head to head)CTBP1 antisense RNA 1 (non-protein coding)CTBP1 antisense RNA 2 (head to head)
Modification date20200313
UniProtAcc

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

Top

RNA A-to-I events for CTBP1-DT

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_1104868(1252178, +), ADediting_1104869(1252209, +), ADediting_1104870(1252212, +), ADediting_1104871(1252213, +), ADediting_1104872(1252362, +), ADediting_1104873(1263540, +), ADediting_1104874(1263616, +), ADediting_1104875(1263668, +), ADediting_1104876(1263688, +), ADediting_1104877(1263760, +), ADediting_1104878(1263855, +), ADediting_1104879(1263872, +), ADediting_1104880(1263911, +), ADediting_1104881(1263919, +), ADediting_1104882(1263974, +), ADediting_1104883(1263991, +), ADediting_1104884(1264029, +), ADediting_1104885(1264255, +), ADediting_1104886(1264300, +), ADediting_1104887(1264301, +), ADediting_1104888(1264304, +), ADediting_1104889(1264355, +), ADediting_1104890(1264358, +), ADediting_1104891(1264375, +), ADediting_1104892(1264436, +), ADediting_1104893(1264449, +), ADediting_1104894(1264455, +), ADediting_1104895(1264616, +), ADediting_1104896(1264620, +), ADediting_1104897(1264632, +), ADediting_1104898(1264638, +), ADediting_1104899(1264639, +), ADediting_1104900(1264644, +), ADediting_1104901(1264647, +), ADediting_1104902(1264653, +), ADediting_1104903(1264660, +), ADediting_1104904(1264661, +), ADediting_1104905(1264662, +), ADediting_1104906(1264674, +), ADediting_1104907(1264700, +), ADediting_1104908(1264702, +), ADediting_1104909(1264704, +), ADediting_1104910(1264708, +), ADediting_1104911(1264715, +), ADediting_1104912(1264734, +), ADediting_1104913(1264735, +), ADediting_1104914(1264736, +), ADediting_1104915(1264739, +), ADediting_1104916(1264755, +), ADediting_1104917(1264775, +), ADediting_1104918(1264779, +), ADediting_1104919(1264811, +), ADediting_1104920(1264835, +), ADediting_1104921(1264855, +), ADediting_1104922(1264868, +), ADediting_1104923(1265203, +), ADediting_1104924(1265215, +), ADediting_1104925(1265223, +), ADediting_1104926(1266061, +), ADediting_1104927(1266066, +), ADediting_1104928(1266075, +), ADediting_1104929(1266101, +), ADediting_1104930(1266109, +), ADediting_1104931(1266122, +), ADediting_1104932(1266128, +), ADediting_1104933(1266147, +), ADediting_1104934(1266148, +), ADediting_1104935(1266170, +), ADediting_1104936(1266185, +), ADediting_1104937(1266195, +), ADediting_1104938(1266208, +), ADediting_1104939(1266210, +), ADediting_1104940(1266220, +), ADediting_1104941(1266223, +), ADediting_1104942(1266233, +), ADediting_1104943(1266237, +), ADediting_1104944(1266256, +), ADediting_1104945(1266270, +), ADediting_1104946(1266272, +), ADediting_1104947(1266280, +), ADediting_1104948(1266296, +), ADediting_1104949(1270123, +), ADediting_1104950(1270139, +), ADediting_1104951(1270158, +), ADediting_1104952(1270172, +), ADediting_1104953(1270173, +), ADediting_1104954(1270176, +), ADediting_1104955(1270280, +), ADediting_1104956(1275528, +), ADediting_1104957(1275550, +), ADediting_1104958(1275555, +), ADediting_1104959(1275567, +), ADediting_1104960(1275663, +), ADediting_1104961(1275704, +), ADediting_1104962(1275705, +), ADediting_1104963(1276486, +), ADediting_1104964(1276523, +), ADediting_1104965(1276571, +), ADediting_1104971(1276616, +), ADediting_1104972(1276657, +), ADediting_1104973(1276658, +), ADediting_1107130(1287655, +), ADediting_1107131(1287720, +), ADediting_1576240(1252310, +), ADediting_1576241(1257813, +), ADediting_1576242(1263530, +), ADediting_1576243(1263567, +), ADediting_1576244(1263636, +), ADediting_1576245(1263671, +), ADediting_1576246(1263803, +), ADediting_1576247(1263810, +), ADediting_1576248(1263860, +), ADediting_1576249(1263886, +), ADediting_1576250(1263959, +), ADediting_1576251(1263980, +), ADediting_1576252(1264030, +), ADediting_1576253(1264052, +), ADediting_1576254(1264065, +), ADediting_1576255(1264236, +), ADediting_1576256(1264275, +), ADediting_1576257(1264665, +), ADediting_1576258(1264721, +), ADediting_1576259(1264744, +), ADediting_1576260(1264795, +), ADediting_1576261(1264814, +), ADediting_1576262(1266119, +), ADediting_1576263(1266133, +), ADediting_1576264(1266181, +), ADediting_1576265(1266182, +), ADediting_1576266(1266216, +), ADediting_1576267(1266240, +), ADediting_1576268(1266318, +), ADediting_1576269(1266319, +), ADediting_1576270(1270125, +), ADediting_1576271(1270253, +), ADediting_1576272(1271515, +), ADediting_1576273(1272002, +), ADediting_1576274(1272028, +), ADediting_1576275(1277243, +), ADediting_1576276(1277269, +), ADediting_1576277(1277270, +), ADediting_1576278(1277271, +), ADediting_1576279(1277295, +), ADediting_1576280(1277297, +), ADediting_1576281(1277298, +), ADediting_1576282(1277303, +), ADediting_1576283(1277310, +), ADediting_1576284(1277313, +), ADediting_1576287(1278162, +), ADediting_1576288(1278241, +), ADediting_1650018(1252280, +),

Top

RNA editing positional annotations for CTBP1-DT using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_1104868chr4_1252178_+ncRNA_exonic
ADediting_1104869chr4_1252209_+ncRNA_exonic
ADediting_1104870chr4_1252212_+ncRNA_exonic
ADediting_1104871chr4_1252213_+ncRNA_exonic
ADediting_1104872chr4_1252362_+ncRNA_exonic
ADediting_1104873chr4_1263540_+ncRNA_intronic
ADediting_1104874chr4_1263616_+ncRNA_intronic
ADediting_1104875chr4_1263668_+ncRNA_intronic
ADediting_1104876chr4_1263688_+ncRNA_intronic
ADediting_1104877chr4_1263760_+ncRNA_intronic
ADediting_1104878chr4_1263855_+ncRNA_intronic
ADediting_1104879chr4_1263872_+ncRNA_intronic
ADediting_1104880chr4_1263911_+ncRNA_intronic
ADediting_1104881chr4_1263919_+ncRNA_intronic
ADediting_1104882chr4_1263974_+ncRNA_intronic
ADediting_1104883chr4_1263991_+ncRNA_intronic
ADediting_1104884chr4_1264029_+ncRNA_intronic
ADediting_1104885chr4_1264255_+ncRNA_intronic
ADediting_1104886chr4_1264300_+ncRNA_intronic
ADediting_1104887chr4_1264301_+ncRNA_intronic
ADediting_1104888chr4_1264304_+ncRNA_intronic
ADediting_1104889chr4_1264355_+ncRNA_intronic
ADediting_1104890chr4_1264358_+ncRNA_intronic
ADediting_1104891chr4_1264375_+ncRNA_intronic
ADediting_1104892chr4_1264436_+ncRNA_intronic
ADediting_1104893chr4_1264449_+ncRNA_intronic
ADediting_1104894chr4_1264455_+ncRNA_intronic
ADediting_1104895chr4_1264616_+ncRNA_intronic
ADediting_1104896chr4_1264620_+ncRNA_intronic
ADediting_1104897chr4_1264632_+ncRNA_intronic
ADediting_1104898chr4_1264638_+ncRNA_intronic
ADediting_1104899chr4_1264639_+ncRNA_intronic
ADediting_1104900chr4_1264644_+ncRNA_intronic
ADediting_1104901chr4_1264647_+ncRNA_intronic
ADediting_1104902chr4_1264653_+ncRNA_intronic
ADediting_1104903chr4_1264660_+ncRNA_intronic
ADediting_1104904chr4_1264661_+ncRNA_intronic
ADediting_1104905chr4_1264662_+ncRNA_intronic
ADediting_1104906chr4_1264674_+ncRNA_intronic
ADediting_1104907chr4_1264700_+ncRNA_intronic
ADediting_1104908chr4_1264702_+ncRNA_intronic
ADediting_1104909chr4_1264704_+ncRNA_intronic
ADediting_1104910chr4_1264708_+ncRNA_intronic
ADediting_1104911chr4_1264715_+ncRNA_intronic
ADediting_1104912chr4_1264734_+ncRNA_intronic
ADediting_1104913chr4_1264735_+ncRNA_intronic
ADediting_1104914chr4_1264736_+ncRNA_intronic
ADediting_1104915chr4_1264739_+ncRNA_intronic
ADediting_1104916chr4_1264755_+ncRNA_intronic
ADediting_1104917chr4_1264775_+ncRNA_intronic
ADediting_1104918chr4_1264779_+ncRNA_intronic
ADediting_1104919chr4_1264811_+ncRNA_intronic
ADediting_1104920chr4_1264835_+ncRNA_intronic
ADediting_1104921chr4_1264855_+ncRNA_intronic
ADediting_1104922chr4_1264868_+ncRNA_intronic
ADediting_1104923chr4_1265203_+ncRNA_intronic
ADediting_1104924chr4_1265215_+ncRNA_intronic
ADediting_1104925chr4_1265223_+ncRNA_intronic
ADediting_1104926chr4_1266061_+ncRNA_exonic
ADediting_1104927chr4_1266066_+ncRNA_exonic
ADediting_1104928chr4_1266075_+ncRNA_exonic
ADediting_1104929chr4_1266101_+ncRNA_exonic
ADediting_1104930chr4_1266109_+ncRNA_exonic
ADediting_1104931chr4_1266122_+ncRNA_exonic
ADediting_1104932chr4_1266128_+ncRNA_exonic
ADediting_1104933chr4_1266147_+ncRNA_exonic
ADediting_1104934chr4_1266148_+ncRNA_exonic
ADediting_1104935chr4_1266170_+ncRNA_intronic
ADediting_1104936chr4_1266185_+ncRNA_intronic
ADediting_1104937chr4_1266195_+ncRNA_intronic
ADediting_1104938chr4_1266208_+ncRNA_intronic
ADediting_1104939chr4_1266210_+ncRNA_intronic
ADediting_1104940chr4_1266220_+ncRNA_intronic
ADediting_1104941chr4_1266223_+ncRNA_intronic
ADediting_1104942chr4_1266233_+ncRNA_intronic
ADediting_1104943chr4_1266237_+ncRNA_intronic
ADediting_1104944chr4_1266256_+ncRNA_intronic
ADediting_1104945chr4_1266270_+ncRNA_intronic
ADediting_1104946chr4_1266272_+ncRNA_intronic
ADediting_1104947chr4_1266280_+ncRNA_intronic
ADediting_1104948chr4_1266296_+ncRNA_intronic
ADediting_1104949chr4_1270123_+ncRNA_intronic
ADediting_1104950chr4_1270139_+ncRNA_intronic
ADediting_1104951chr4_1270158_+ncRNA_intronic
ADediting_1104952chr4_1270172_+ncRNA_intronic
ADediting_1104953chr4_1270173_+ncRNA_intronic
ADediting_1104954chr4_1270176_+ncRNA_intronic
ADediting_1104955chr4_1270280_+ncRNA_intronic
ADediting_1104956chr4_1275528_+ncRNA_intronic
ADediting_1104957chr4_1275550_+ncRNA_intronic
ADediting_1104958chr4_1275555_+ncRNA_intronic
ADediting_1104959chr4_1275567_+ncRNA_intronic
ADediting_1104960chr4_1275663_+ncRNA_intronic
ADediting_1104961chr4_1275704_+ncRNA_intronic
ADediting_1104962chr4_1275705_+ncRNA_intronic
ADediting_1104963chr4_1276486_+ncRNA_intronic
ADediting_1104964chr4_1276523_+ncRNA_intronic
ADediting_1104965chr4_1276571_+ncRNA_intronic
ADediting_1104971chr4_1276616_+ncRNA_intronic
ADediting_1104972chr4_1276657_+ncRNA_intronic
ADediting_1104973chr4_1276658_+ncRNA_intronic
ADediting_1107130chr4_1287655_+ncRNA_exonic
ADediting_1107131chr4_1287720_+ncRNA_exonic
ADediting_1576240chr4_1252310_+ncRNA_exonic
ADediting_1576241chr4_1257813_+ncRNA_intronic
ADediting_1576242chr4_1263530_+ncRNA_intronic
ADediting_1576243chr4_1263567_+ncRNA_intronic
ADediting_1576244chr4_1263636_+ncRNA_intronic
ADediting_1576245chr4_1263671_+ncRNA_intronic
ADediting_1576246chr4_1263803_+ncRNA_intronic
ADediting_1576247chr4_1263810_+ncRNA_intronic
ADediting_1576248chr4_1263860_+ncRNA_intronic
ADediting_1576249chr4_1263886_+ncRNA_intronic
ADediting_1576250chr4_1263959_+ncRNA_intronic
ADediting_1576251chr4_1263980_+ncRNA_intronic
ADediting_1576252chr4_1264030_+ncRNA_intronic
ADediting_1576253chr4_1264052_+ncRNA_intronic
ADediting_1576254chr4_1264065_+ncRNA_intronic
ADediting_1576255chr4_1264236_+ncRNA_intronic
ADediting_1576256chr4_1264275_+ncRNA_intronic
ADediting_1576257chr4_1264665_+ncRNA_intronic
ADediting_1576258chr4_1264721_+ncRNA_intronic
ADediting_1576259chr4_1264744_+ncRNA_intronic
ADediting_1576260chr4_1264795_+ncRNA_intronic
ADediting_1576261chr4_1264814_+ncRNA_intronic
ADediting_1576262chr4_1266119_+ncRNA_exonic
ADediting_1576263chr4_1266133_+ncRNA_exonic
ADediting_1576264chr4_1266181_+ncRNA_intronic
ADediting_1576265chr4_1266182_+ncRNA_intronic
ADediting_1576266chr4_1266216_+ncRNA_intronic
ADediting_1576267chr4_1266240_+ncRNA_intronic
ADediting_1576268chr4_1266318_+ncRNA_intronic
ADediting_1576269chr4_1266319_+ncRNA_intronic
ADediting_1576270chr4_1270125_+ncRNA_intronic
ADediting_1576271chr4_1270253_+ncRNA_intronic
ADediting_1576272chr4_1271515_+ncRNA_intronic
ADediting_1576273chr4_1272002_+ncRNA_intronic
ADediting_1576274chr4_1272028_+ncRNA_intronic
ADediting_1576275chr4_1277243_+ncRNA_intronic
ADediting_1576276chr4_1277269_+ncRNA_intronic
ADediting_1576277chr4_1277270_+ncRNA_intronic
ADediting_1576278chr4_1277271_+ncRNA_intronic
ADediting_1576279chr4_1277295_+ncRNA_intronic
ADediting_1576280chr4_1277297_+ncRNA_intronic
ADediting_1576281chr4_1277298_+ncRNA_intronic
ADediting_1576282chr4_1277303_+ncRNA_intronic
ADediting_1576283chr4_1277310_+ncRNA_intronic
ADediting_1576284chr4_1277313_+ncRNA_intronic
ADediting_1576287chr4_1278162_+ncRNA_intronic
ADediting_1576288chr4_1278241_+ncRNA_intronic
ADediting_1650018chr4_1252280_+ncRNA_exonic

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_1104868chr4_1252178_+SINEAluName=AluSq2
ADediting_1104869chr4_1252209_+SINEAluName=AluSq2
ADediting_1104870chr4_1252212_+SINEAluName=AluSq2
ADediting_1104871chr4_1252213_+SINEAluName=AluSq2
ADediting_1104872chr4_1252362_+SINEAluName=AluSq2
ADediting_1104873chr4_1263540_+SINEAluName=AluSc
ADediting_1104874chr4_1263616_+SINEAluName=AluSc
ADediting_1104875chr4_1263668_+SINEAluName=AluSc
ADediting_1104876chr4_1263688_+SINEAluName=AluSc
ADediting_1104877chr4_1263760_+SINEAluName=AluSc
ADediting_1104878chr4_1263855_+SINEAluName=AluJr
ADediting_1104879chr4_1263872_+SINEAluName=AluJr
ADediting_1104880chr4_1263911_+SINEAluName=AluJr
ADediting_1104881chr4_1263919_+SINEAluName=AluJr
ADediting_1104882chr4_1263974_+SINEAluName=AluJr
ADediting_1104883chr4_1263991_+SINEAluName=AluJr
ADediting_1104884chr4_1264029_+SINEAluName=AluJr
ADediting_1104885chr4_1264255_+SINEAluName=AluSq2
ADediting_1104886chr4_1264300_+SINEAluName=AluSq2
ADediting_1104887chr4_1264301_+SINEAluName=AluSq2
ADediting_1104888chr4_1264304_+SINEAluName=AluSq2
ADediting_1104889chr4_1264355_+SINEAluName=AluSq2
ADediting_1104890chr4_1264358_+SINEAluName=AluSq2
ADediting_1104891chr4_1264375_+SINEAluName=AluSq2
ADediting_1104892chr4_1264436_+SINEAluName=AluSq2
ADediting_1104893chr4_1264449_+SINEAluName=AluSq2
ADediting_1104894chr4_1264455_+SINEAluName=AluSq2
ADediting_1104895chr4_1264616_+SINEAluName=AluJo
ADediting_1104896chr4_1264620_+SINEAluName=AluJo
ADediting_1104897chr4_1264632_+SINEAluName=AluJo
ADediting_1104898chr4_1264638_+SINEAluName=AluJo
ADediting_1104899chr4_1264639_+SINEAluName=AluJo
ADediting_1104900chr4_1264644_+SINEAluName=AluJo
ADediting_1104901chr4_1264647_+SINEAluName=AluJo
ADediting_1104902chr4_1264653_+SINEAluName=AluJo
ADediting_1104903chr4_1264660_+SINEAluName=AluJo
ADediting_1104904chr4_1264661_+SINEAluName=AluJo
ADediting_1104905chr4_1264662_+SINEAluName=AluJo
ADediting_1104906chr4_1264674_+SINEAluName=AluJo
ADediting_1104907chr4_1264700_+SINEAluName=AluJo
ADediting_1104908chr4_1264702_+SINEAluName=AluJo
ADediting_1104909chr4_1264704_+SINEAluName=AluJo
ADediting_1104910chr4_1264708_+SINEAluName=AluJo
ADediting_1104911chr4_1264715_+SINEAluName=AluJo
ADediting_1104912chr4_1264734_+SINEAluName=AluJo
ADediting_1104913chr4_1264735_+SINEAluName=AluJo
ADediting_1104914chr4_1264736_+SINEAluName=AluJo
ADediting_1104915chr4_1264739_+SINEAluName=AluJo
ADediting_1104916chr4_1264755_+SINEAluName=AluJo
ADediting_1104917chr4_1264775_+SINEAluName=AluJo
ADediting_1104918chr4_1264779_+SINEAluName=AluJo
ADediting_1104919chr4_1264811_+SINEAluName=AluJo
ADediting_1104920chr4_1264835_+SINEAluName=AluJo
ADediting_1104921chr4_1264855_+SINEAluName=AluJo
ADediting_1104922chr4_1264868_+SINEAluName=AluJo
ADediting_1104923chr4_1265203_+SINEAluName=FLAM_A
ADediting_1104924chr4_1265215_+SINEAluName=FLAM_A
ADediting_1104925chr4_1265223_+SINEAluName=FLAM_A
ADediting_1104926chr4_1266061_+SINEAluName=AluJr4
ADediting_1104927chr4_1266066_+SINEAluName=AluJr4
ADediting_1104928chr4_1266075_+SINEAluName=AluJr4
ADediting_1104929chr4_1266101_+SINEAluName=AluJr4
ADediting_1104930chr4_1266109_+SINEAluName=AluJr4
ADediting_1104931chr4_1266122_+SINEAluName=AluJr4
ADediting_1104932chr4_1266128_+SINEAluName=AluJr4
ADediting_1104933chr4_1266147_+SINEAluName=AluJr4
ADediting_1104934chr4_1266148_+SINEAluName=AluJr4
ADediting_1104935chr4_1266170_+SINEAluName=AluJr4
ADediting_1104936chr4_1266185_+SINEAluName=AluJr4
ADediting_1104937chr4_1266195_+SINEAluName=AluJr4
ADediting_1104938chr4_1266208_+SINEAluName=AluJr4
ADediting_1104939chr4_1266210_+SINEAluName=AluJr4
ADediting_1104940chr4_1266220_+SINEAluName=AluJr4
ADediting_1104941chr4_1266223_+SINEAluName=AluJr4
ADediting_1104942chr4_1266233_+SINEAluName=AluJr4
ADediting_1104943chr4_1266237_+SINEAluName=AluJr4
ADediting_1104944chr4_1266256_+SINEAluName=AluJr4
ADediting_1104945chr4_1266270_+SINEAluName=AluJr4
ADediting_1104946chr4_1266272_+SINEAluName=AluJr4
ADediting_1104947chr4_1266280_+SINEAluName=AluJr4
ADediting_1104948chr4_1266296_+SINEAluName=AluJr4
ADediting_1104949chr4_1270123_+SINEAluName=AluJb
ADediting_1104950chr4_1270139_+SINEAluName=AluJb
ADediting_1104951chr4_1270158_+SINEAluName=AluJb
ADediting_1104952chr4_1270172_+SINEAluName=AluJb
ADediting_1104953chr4_1270173_+SINEAluName=AluJb
ADediting_1104954chr4_1270176_+SINEAluName=AluJb
ADediting_1104955chr4_1270280_+SINEAluName=AluJb
ADediting_1104956chr4_1275528_+SINEAluName=AluY
ADediting_1104957chr4_1275550_+SINEAluName=AluY
ADediting_1104958chr4_1275555_+SINEAluName=AluY
ADediting_1104959chr4_1275567_+SINEAluName=AluY
ADediting_1104960chr4_1275663_+SINEAluName=AluY
ADediting_1104961chr4_1275704_+SINEAluName=AluY
ADediting_1104962chr4_1275705_+SINEAluName=AluY
ADediting_1104963chr4_1276486_+SINEAluName=AluSz
ADediting_1104964chr4_1276523_+SINEAluName=AluSz
ADediting_1104965chr4_1276571_+SINEAluName=AluSz
ADediting_1104971chr4_1276616_+SINEAluName=AluSz
ADediting_1104972chr4_1276657_+SINEAluName=AluSz
ADediting_1104973chr4_1276658_+SINEAluName=AluSz
ADediting_1107130chr4_1287655_+SINEAluName=AluSc
ADediting_1107131chr4_1287720_+SINEAluName=AluSc
ADediting_1576240chr4_1252310_+SINEAluName=AluSq2
ADediting_1576241chr4_1257813_+LINEL1Name=L1MB2
ADediting_1576242chr4_1263530_+SINEAluName=AluSc
ADediting_1576243chr4_1263567_+SINEAluName=AluSc
ADediting_1576244chr4_1263636_+SINEAluName=AluSc
ADediting_1576245chr4_1263671_+SINEAluName=AluSc
ADediting_1576246chr4_1263803_+SINEAluName=AluJr
ADediting_1576247chr4_1263810_+SINEAluName=AluJr
ADediting_1576248chr4_1263860_+SINEAluName=AluJr
ADediting_1576249chr4_1263886_+SINEAluName=AluJr
ADediting_1576250chr4_1263959_+SINEAluName=AluJr
ADediting_1576251chr4_1263980_+SINEAluName=AluJr
ADediting_1576252chr4_1264030_+SINEAluName=AluJr
ADediting_1576253chr4_1264052_+SINEAluName=AluJr
ADediting_1576254chr4_1264065_+SINEAluName=AluJr
ADediting_1576255chr4_1264236_+SINEAluName=AluSq2
ADediting_1576256chr4_1264275_+SINEAluName=AluSq2
ADediting_1576257chr4_1264665_+SINEAluName=AluJo
ADediting_1576258chr4_1264721_+SINEAluName=AluJo
ADediting_1576259chr4_1264744_+SINEAluName=AluJo
ADediting_1576260chr4_1264795_+SINEAluName=AluJo
ADediting_1576261chr4_1264814_+SINEAluName=AluJo
ADediting_1576262chr4_1266119_+SINEAluName=AluJr4
ADediting_1576263chr4_1266133_+SINEAluName=AluJr4
ADediting_1576264chr4_1266181_+SINEAluName=AluJr4
ADediting_1576265chr4_1266182_+SINEAluName=AluJr4
ADediting_1576266chr4_1266216_+SINEAluName=AluJr4
ADediting_1576267chr4_1266240_+SINEAluName=AluJr4
ADediting_1576268chr4_1266318_+SINEAluName=AluJr4
ADediting_1576269chr4_1266319_+SINEAluName=AluJr4
ADediting_1576270chr4_1270125_+SINEAluName=AluJb
ADediting_1576271chr4_1270253_+SINEAluName=AluJb
ADediting_1576272chr4_1271515_+LINEL1Name=L1M4c
ADediting_1576273chr4_1272002_+LINEL1Name=L1M4c
ADediting_1576274chr4_1272028_+LINEL1Name=L1M4c
ADediting_1576275chr4_1277243_+LINEL1Name=L1M4
ADediting_1576276chr4_1277269_+LINEL1Name=L1M4
ADediting_1576277chr4_1277270_+LINEL1Name=L1M4
ADediting_1576278chr4_1277271_+LINEL1Name=L1M4
ADediting_1576279chr4_1277295_+LINEL1Name=L1M4
ADediting_1576280chr4_1277297_+LINEL1Name=L1M4
ADediting_1576281chr4_1277298_+LINEL1Name=L1M4
ADediting_1576282chr4_1277303_+LINEL1Name=L1M4
ADediting_1576283chr4_1277310_+LINEL1Name=L1M4
ADediting_1576284chr4_1277313_+LINEL1Name=L1M4
ADediting_1576287chr4_1278162_+LINEL1Name=L1MB5
ADediting_1576288chr4_1278241_+LINEL1Name=L1MB5
ADediting_1650018chr4_1252280_+SINEAluName=AluSq2

Top

RNA A-to-I editing events in the alternative splicing sites for CTBP1-DT

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for CTBP1-DT

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
boxplot
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
Soverview
Soverview
Soverview

check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
ADeditome IDChrPositoingSkipped exonENSGENSTs

Top

Protein coding region RNA A-to-I editings for CTBP1-DT

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for CTBP1-DT

check buttonRNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
all structure

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1104868chr4_1252178_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-4537chr4125217612521838mer-1a12521601252183146-21.75
ADediting_1104869chr4_1252209_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-3140-5pchr4125220412522107mer-m812521911252211141-10.83
ADediting_1104869chr4_1252209_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-5187-3pchr4125220312522097mer-m812521901252210145-13.21
ADediting_1104871chr4_1252213_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-146a-5pchr4125221212522187mer-m812521971252219149-21.12
ADediting_1104871chr4_1252213_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-146b-5pchr4125221212522187mer-m812521931252219148-18.2
ADediting_1104871chr4_1252213_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-7153-5pchr4125221212522187mer-m812521961252219150-19.4
ADediting_1104926chr4_1266061_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-6807-5pchr4126606012660667mer-m812660451266067144-19.23
ADediting_1104927chr4_1266066_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-3622a-5pchr4126606512660717mer-m812660531266072157-25.83
ADediting_1104929chr4_1266101_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-4691-5pchr4126610012661067mer-m812660851266107141-18.83
ADediting_1104929chr4_1266101_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-6792-3pchr4126610012661067mer-m812660831266107151-23.21
ADediting_1104931chr4_1266122_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-331-3pchr4126611712661237mer-m812661051266124146-21.93
ADediting_1104931chr4_1266122_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-6846-3pchr4126611912661257mer-m812661081266126145-20.19
ADediting_1104932chr4_1266128_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-3690chr4126612312661308mer-1a12661061266130144-19.73
ADediting_1104932chr4_1266128_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-378a-3pchr4126612212661287mer-m812661081266129152-19.41
ADediting_1104932chr4_1266128_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-378bchr4126612212661287mer-m812661091266129144-17.72
ADediting_1104932chr4_1266128_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-378cchr4126612212661287mer-m812661031266129156-23.42
ADediting_1104932chr4_1266128_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-378dchr4126612212661287mer-m812661081266129152-19.41
ADediting_1104932chr4_1266128_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-378echr4126612212661287mer-m812661091266129152-23.25
ADediting_1104932chr4_1266128_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-378fchr4126612212661287mer-m812661101266129147-18.95
ADediting_1104932chr4_1266128_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-378hchr4126612212661287mer-m812661071266129158-24.24
ADediting_1104932chr4_1266128_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-378ichr4126612212661287mer-m812661071266129144-19.18
ADediting_1107131chr4_1287720_+ENSG00000196810.5ENST00000578730.1CTBP1-DT-205hsa-miR-17-3pchr4128771712880268mer-1a12877021288026162-22.38
ADediting_1576240chr4_1252310_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-433-5pchr4125230512523117mer-m812522891252312159-23.87

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1104868chr4_1252178_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-3160-3pchr4125217612521838mer-1a12521621252183148-15.37
ADediting_1104870chr4_1252212_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-219b-3pchr4125221012522167mer-m812521971252217148-13.87
ADediting_1104870chr4_1252212_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-302fchr4125220912522157mer-m812522001252216149-7.49
ADediting_1104871chr4_1252213_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-219b-3pchr4125221012522167mer-m812521971252217148-13.87
ADediting_1104871chr4_1252213_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-302fchr4125220912522157mer-m812522001252216149-7.49
ADediting_1104872chr4_1252362_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-4293chr4125236012523667mer-m812523511252367145-15.63
ADediting_1104927chr4_1266066_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-556-5pchr4126606112660677mer-m812660481266068144-10.65
ADediting_1104928chr4_1266075_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-10399-5pchr4126607012660767mer-m812660551266077146-10.11
ADediting_1104928chr4_1266075_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-6504-3pchr4126607012660767mer-m812660561266077151-9.54
ADediting_1104930chr4_1266109_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-1245achr4126610512661117mer-m812660921266112141-13.44
ADediting_1104930chr4_1266109_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-8079chr4126610512661117mer-m812660941266112155-14.83
ADediting_1104932chr4_1266128_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-4529-3pchr4126612212661287mer-m812661091266129152-20.6
ADediting_1576262chr4_1266119_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-3176chr4126611412661207mer-m812661031266121140-16.05
ADediting_1576262chr4_1266119_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-6878-3pchr4126611312661197mer-m812660981266120144-22.31
ADediting_1576263chr4_1266133_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-3663-5pchr4126612812661347mer-m812661191266135145-22.42
ADediting_1576263chr4_1266133_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-6131chr4126612912661357mer-m812661181266136140-20.67
ADediting_1650018chr4_1252280_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-3163chr4125227512522817mer-m812522591252282148-12.73

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1391023chr8_140732605_-ENSG00000196810.5ENST00000357591.2CTBP1-DT-201hsa-miR-151a-3pchr4125092112509277mer-m812509091250928156-24.26
ADediting_1391023chr8_140732605_-ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-151a-3pchr4125431112543177mer-m812542971254318150-22.77
ADediting_1391023chr8_140732605_-ENSG00000196810.5ENST00000514984.1CTBP1-DT-204hsa-miR-151a-3pchr4125092112509277mer-m812509091250928156-24.26
ADediting_1391023chr8_140732605_-ENSG00000196810.5ENST00000578730.1CTBP1-DT-205hsa-miR-151a-3pchr4125092112509277mer-m812509091250928156-24.26
ADediting_1391023chr8_140732605_-ENSG00000196810.5ENST00000578730.1CTBP1-DT-205hsa-miR-151a-3pchr4125165712516637mer-m812516431251664146-18.85
ADediting_1391023chr8_140732605_-ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-151a-3pchr4125092112509277mer-m812509091250928156-24.26
ADediting_1391023chr8_140732605_-ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-151a-3pchr4125165712516637mer-m812516431251664146-18.85
ADediting_1391023chr8_140732605_-ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-151a-3pchr4125431112543177mer-m812542971254318150-22.77
ADediting_1391023chr8_140732605_-ENSG00000196810.5ENST00000670838.1CTBP1-DT-207hsa-miR-151a-3pchr4125092112509277mer-m812509091250928156-24.26
ADediting_1391023chr8_140732605_-ENSG00000196810.5ENST00000670838.1CTBP1-DT-207hsa-miR-151a-3pchr4125165712516637mer-m812516431251664146-18.85
ADediting_1535951chr14_100874558_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-337-3pchr4125464512546528mer-1a12546291254652147-13.18
ADediting_1535954chr14_101045974_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-381-3pchr4125585912558657mer-1a12558441255865140-13.86
ADediting_1631458chr19_40282624_-ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-641chr4125267612526838mer-1a12526581252683147-14.58
ADediting_496066chr15_66496985_-ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-4512chr4125194212519487mer-m812519271251949149-25.78
ADediting_843620chr2_207754818_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-4775chr4125441812544247mer-m812544061254425161-16.21
ADediting_843620chr2_207754818_+ENSG00000196810.5ENST00000578730.1CTBP1-DT-205hsa-miR-4775chr4128818412881918mer-1a12881681288191149-11.73
ADediting_843620chr2_207754818_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-4775chr4125441812544247mer-m812544061254425161-16.21
ADediting_98289chr1_32086992_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-5585-3pchr4125350112535077mer-m812534861253508160-23.42
ADediting_98289chr1_32086992_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-5585-3pchr4125350112535077mer-m812534861253508160-23.42

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_107020chr1_37500952_-ENSG00000196810.5ENST00000357591.2CTBP1-DT-201hsa-miR-5581-3pchr4125062912506357mer-m812506141250636145-13.14
ADediting_107020chr1_37500952_-ENSG00000196810.5ENST00000507044.1CTBP1-DT-203hsa-miR-5581-3pchr4125011912501257mer-m812496971250126145-15
ADediting_107020chr1_37500952_-ENSG00000196810.5ENST00000578730.1CTBP1-DT-205hsa-miR-5581-3pchr4125011912501257mer-m812501011250126149-18.34
ADediting_107020chr1_37500952_-ENSG00000196810.5ENST00000578730.1CTBP1-DT-205hsa-miR-5581-3pchr4125062912506357mer-m812506141250636145-13.14
ADediting_107020chr1_37500952_-ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-5581-3pchr4125062912506357mer-m812506141250636145-13.14
ADediting_107020chr1_37500952_-ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-5581-3pchr4125188812518947mer-m812518741251895145-19.06
ADediting_107020chr1_37500952_-ENSG00000196810.5ENST00000670838.1CTBP1-DT-207hsa-miR-5581-3pchr4125011912501257mer-m812501011250126149-18.34
ADediting_107020chr1_37500952_-ENSG00000196810.5ENST00000670838.1CTBP1-DT-207hsa-miR-5581-3pchr4125062912506357mer-m812506141250636145-13.14
ADediting_1471003chr9_63819626_+ENSG00000196810.5ENST00000578730.1CTBP1-DT-205hsa-miR-4477bchr4128817012881778mer-1a12881551288177155-8.81
ADediting_1471003chr9_63819626_+ENSG00000196810.5ENST00000578730.1CTBP1-DT-205hsa-miR-4477bchr4128825712882637mer-m812882391288264148-13.33
ADediting_1471004chr9_63819627_+ENSG00000196810.5ENST00000578730.1CTBP1-DT-205hsa-miR-4477bchr4128817012881778mer-1a12881551288177155-8.81
ADediting_1471004chr9_63819627_+ENSG00000196810.5ENST00000578730.1CTBP1-DT-205hsa-miR-4477bchr4128825712882637mer-m812882391288264148-13.33
ADediting_1535951chr14_100874558_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-337-3pchr4126544012654467mer-m812654281265447147-12.16
ADediting_1535951chr14_100874558_+ENSG00000196810.5ENST00000670838.1CTBP1-DT-207hsa-miR-337-3pchr4126544012654467mer-m812654281265447147-12.16
ADediting_1535953chr14_101045971_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-381-3pchr4125301312530208mer-1a12529991253020140-12.69
ADediting_1535953chr14_101045971_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-381-3pchr4125252312525308mer-1a12525091252530140-9.41
ADediting_1535953chr14_101045971_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-381-3pchr4125301312530208mer-1a12529991253020140-12.69
ADediting_1535954chr14_101045974_+ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-381-3pchr4125301312530208mer-1a12529991253020140-12.69
ADediting_1535954chr14_101045974_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-381-3pchr4125252312525308mer-1a12525091252530140-9.41
ADediting_1535954chr14_101045974_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-381-3pchr4125301312530208mer-1a12529991253020140-12.69
ADediting_1556067chr19_40282625_-ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-641chr4125325612532627mer-m812532391253263146-9.92
ADediting_1556067chr19_40282625_-ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-641chr4125325612532627mer-m812532391253263146-9.92
ADediting_1631458chr19_40282624_-ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-641chr4125325612532627mer-m812532391253263146-9.92
ADediting_1631458chr19_40282624_-ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-641chr4125325612532627mer-m812532391253263146-9.92
ADediting_496066chr15_66496985_-ENSG00000196810.5ENST00000505364.1CTBP1-DT-202hsa-miR-4512chr4125431712543248mer-1a12543021254324155-21.32
ADediting_496066chr15_66496985_-ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-4512chr4125431712543248mer-1a12543021254324155-21.32
ADediting_527135chr16_24203190_+ENSG00000196810.5ENST00000357591.2CTBP1-DT-201hsa-miR-1273h-3pchr4125110412511107mer-m812510921251111141-12.34
ADediting_527135chr16_24203190_+ENSG00000196810.5ENST00000514984.1CTBP1-DT-204hsa-miR-1273h-3pchr4125110412511107mer-m812510921251111141-12.34
ADediting_527135chr16_24203190_+ENSG00000196810.5ENST00000578730.1CTBP1-DT-205hsa-miR-1273h-3pchr4125110412511107mer-m812510921251111141-12.34
ADediting_527135chr16_24203190_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-1273h-3pchr4125110412511107mer-m812510921251111141-12.34
ADediting_527135chr16_24203190_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-1273h-3pchr4125543912554457mer-m812554271255446149-23.46
ADediting_527135chr16_24203190_+ENSG00000196810.5ENST00000670838.1CTBP1-DT-207hsa-miR-1273h-3pchr4125110412511107mer-m812510921251111141-12.34
ADediting_843620chr2_207754818_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-4775chr4125475712547648mer-1a12547431254764140-5.96
ADediting_843620chr2_207754818_+ENSG00000196810.5ENST00000581398.1CTBP1-DT-206hsa-miR-4775chr4125577612557827mer-m812557621255783149-5.17

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for CTBP1-DT

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000581398.1lncRNASoverviewSoverview
ENST00000578730.1lncRNASoverviewSoverview
ENST00000505364.1lncRNASoverviewSoverview

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
ADediting_1104868ENST00000581398.1chr4_1252178_+1920-1777.88-1778.58-1782.68
ADediting_1104869ENST00000581398.1chr4_1252209_+1951-1780.98-1778.58-1782.68
ADediting_1104870ENST00000581398.1chr4_1252212_+1954-1780.68-1778.58-1782.68
ADediting_1104871ENST00000581398.1chr4_1252213_+1955-1779.58-1778.58-1782.68
ADediting_1650018ENST00000581398.1chr4_1252280_+2022-1777.48-1778.58-1782.68
ADediting_1576240ENST00000581398.1chr4_1252310_+2052-1778.58-1778.58-1782.68
ADediting_1104872ENST00000581398.1chr4_1252362_+2104-1779.58-1778.58-1782.68
ADediting_1107130ENST00000578730.1chr4_1287655_+2423-1105.90-1106.70-1108.90
ADediting_1107131ENST00000578730.1chr4_1287720_+2488-1107.90-1106.70-1108.90
ADediting_1104926ENST00000505364.1chr4_1266061_+2321-881.40-881.70-886.00
ADediting_1104927ENST00000505364.1chr4_1266066_+2326-881.30-881.70-886.00
ADediting_1104928ENST00000505364.1chr4_1266075_+2335-881.70-881.70-886.00
ADediting_1104929ENST00000505364.1chr4_1266101_+2361-884.30-881.70-886.00
ADediting_1104930ENST00000505364.1chr4_1266109_+2369-881.30-881.70-886.00
ADediting_1576262ENST00000505364.1chr4_1266119_+2379-881.00-881.70-886.00
ADediting_1104931ENST00000505364.1chr4_1266122_+2382-880.80-881.70-886.00
ADediting_1104932ENST00000505364.1chr4_1266128_+2388-881.40-881.70-886.00
ADediting_1576263ENST00000505364.1chr4_1266133_+2393-881.00-881.70-886.00
ADediting_1104933ENST00000505364.1chr4_1266147_+2407-880.40-881.70-886.00
ADediting_1104934ENST00000505364.1chr4_1266148_+2408-888.40-881.70-886.00

Top

Relation with ADAR for CTBP1-DT

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
CERADediting_1104929chr4_1266101_+0.016286478319570.1958920528120150.0001055668612309170.3112918746302970.002308558300063430.24701535522073
DLPFCADediting_1104947chr4_1266280_+5.83368569687148e-080.3020480097489995.45556781496323e-050.2270998825755157.0850168669102e-110.359262945485638
CERADediting_1104947chr4_1266280_+0.0007211845704428150.273106658783641.75606877496566e-050.3427770264978360.813519248619970.0194208572818403
CERADediting_1104951chr4_1270158_+0.01303879585534460.202304027685025.28526948813785e-060.3620961801649691.04929211519267e-050.351217980429128
CERADediting_1104954chr4_1270176_+0.371607792855960.07346711600780770.01656499709742350.1953956345601052.07447293952815e-050.339992752222885
DLPFCADediting_1107130chr4_1287655_+0.05633622355015770.1085093987526170.7507464135748510.01811330235562814.91449034536319e-100.343926491831938

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC1.80341662522081e-590.7595055549002077.6628360210282e-310.5931307210767573.28337651620175e-320.604031890767609
AC3.64289255980564e-750.8620807088716391.14804135467594e-510.7765451700326319.52723136937854e-160.479047966451089
PCC1.62949277451337e-360.7552197933473751.03705287183496e-310.7192021021449392.54676853870873e-080.38955582996935
CER2.51373143149137e-310.7752132915760212.17734961621667e-200.6635687412647960.0005598891316579110.27845519493057
TCX1.74361094973445e-290.75995945775425.20683477054862e-060.3623289605367041.769129864884e-120.534929613753655
FP3.06698085480694e-140.5292814008339731.51008211879051e-050.3181137735041711.69952732295525e-140.533747186026508
IFG1.51653581149584e-050.7510767581700280.0002128421596982690.6752295006072630.001199706374319580.610189459930786
PG1.9317653912926e-080.39751033879490.001648931539803040.2292221700720027.60670271489605e-090.407778707010541
STG2.79942746164064e-100.6215715535414680.001301756054772590.3451722352124411.25791650006765e-080.572655972630486

Top

Relation with AD stages for CTBP1-DT

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.
CERADediting_1104951chr4_1270158_+0.0003453435459286140.338093620814941

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.
CER0.0003185257590157550.339965189745791
TCX7.93058612036284e-060.41873233633751

Top

RelatedDrugs for CTBP1-DT

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for CTBP1-DT

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource