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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for ATG12 |
 Gene summary |
| Gene information | Gene symbol | ATG12 | Gene ID | 9140 |
| Gene name | autophagy related 12 | |
| Synonyms | APG12|APG12L|FBR93|HAPG12 | |
| Cytomap | 5q22.3 | |
| Type of gene | protein-coding | |
| Description | ubiquitin-like protein ATG12APG12 autophagy 12-likeATG12 autophagy related 12 homologApg12 (autophagy, yeast) homolog | |
| Modification date | 20200313 | |
| UniProtAcc | O94817, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for ATG12 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_1159845(115829854, -), ADediting_1159846(115829866, -), ADediting_1159847(115829867, -), ADediting_1159848(115829894, -), ADediting_1159849(115829935, -), ADediting_1159850(115829968, -), ADediting_1159851(115830005, -), ADediting_1159852(115830034, -), ADediting_1159853(115830070, -), ADediting_1159854(115830073, -), ADediting_1159855(115830078, -), ADediting_1159856(115830603, -), ADediting_1159857(115830635, -), ADediting_1159858(115830653, -), ADediting_1159859(115830712, -), ADediting_1159860(115830713, -), ADediting_1159861(115830789, -), ADediting_1159862(115838832, -), ADediting_1159863(115838844, -), ADediting_1159864(115838845, -), ADediting_1159865(115838854, -), ADediting_1159866(115838867, -), ADediting_1159867(115838871, -), ADediting_1159868(115838942, -), ADediting_1159869(115838952, -), ADediting_1159870(115838954, -), ADediting_1159871(115838956, -), ADediting_1159872(115838959, -), ADediting_1159873(115838991, -), ADediting_1159874(115839001, -), ADediting_1159875(115839006, -), ADediting_1159876(115839011, -), ADediting_1159877(115839014, -), ADediting_1159878(115839015, -), ADediting_1159879(115839023, -), ADediting_1159880(115839036, -), ADediting_1159881(115839040, -), ADediting_1159882(115839041, -), ADediting_1159883(115839060, -), ADediting_1159884(115839077, -), ADediting_1159885(115839109, -), ADediting_1159886(115840325, -), ADediting_1159887(115840374, -), ADediting_1159888(115840394, -), ADediting_1159889(115840395, -), ADediting_1159890(115840406, -), ADediting_1159891(115840419, -), ADediting_1159892(115840426, -), ADediting_1159893(115840430, -), ADediting_1159894(115840435, -), ADediting_1159895(115840436, -), ADediting_1159896(115840466, -), ADediting_1159897(115840468, -), ADediting_1159898(115840471, -), ADediting_1159899(115840476, -), ADediting_1159900(115840477, -), ADediting_1159901(115840493, -), ADediting_1159902(115840494, -), ADediting_1159903(115840501, -), ADediting_1159904(115840502, -), ADediting_1159905(115840524, -), ADediting_1159906(115840548, -), ADediting_1159907(115840554, -), ADediting_1159908(115840570, -), ADediting_1159909(115840571, -), ADediting_1578746(115830773, -), ADediting_1578747(115830796, -), ADediting_1578748(115838872, -), ADediting_1578749(115838974, -), ADediting_1578750(115838988, -), ADediting_1578751(115838995, -), ADediting_1578752(115840403, -), ADediting_1578753(115840462, -), ADediting_1578754(115840474, -), ADediting_1654209(115829943, -), ADediting_1654210(115830585, -), ADediting_1654211(115830621, -), ADediting_1654212(115830658, -), ADediting_1654213(115830748, -), ADediting_1654214(115830798, -), |
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RNA editing positional annotations for ATG12 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| ADediting_1159906 | chr5_115840548_- | stoploss | ENST00000379594.7 | c.A228G | p.X76W | . | . | . |
| ADediting_1159907 | chr5_115840554_- | synonymous SNV | ENST00000379594.7 | c.A222G | p.V74V | . | . | . |
| ADediting_1159908 | chr5_115840570_- | nonsynonymous SNV | ENST00000379594.7 | c.A206G | p.N69S | . | . | . |
| ADediting_1159909 | chr5_115840571_- | nonsynonymous SNV | ENST00000379594.7 | c.A205G | p.N69D | . | . | . |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1159845 | chr5_115829854_- | UTR3 |
| ADediting_1159846 | chr5_115829866_- | UTR3 |
| ADediting_1159847 | chr5_115829867_- | UTR3 |
| ADediting_1159848 | chr5_115829894_- | UTR3 |
| ADediting_1159849 | chr5_115829935_- | UTR3 |
| ADediting_1159850 | chr5_115829968_- | UTR3 |
| ADediting_1159851 | chr5_115830005_- | UTR3 |
| ADediting_1159852 | chr5_115830034_- | UTR3 |
| ADediting_1159853 | chr5_115830070_- | UTR3 |
| ADediting_1159854 | chr5_115830073_- | UTR3 |
| ADediting_1159855 | chr5_115830078_- | UTR3 |
| ADediting_1159856 | chr5_115830603_- | UTR3 |
| ADediting_1159857 | chr5_115830635_- | UTR3 |
| ADediting_1159858 | chr5_115830653_- | UTR3 |
| ADediting_1159859 | chr5_115830712_- | UTR3 |
| ADediting_1159860 | chr5_115830713_- | UTR3 |
| ADediting_1159861 | chr5_115830789_- | UTR3 |
| ADediting_1159862 | chr5_115838832_- | intronic |
| ADediting_1159863 | chr5_115838844_- | intronic |
| ADediting_1159864 | chr5_115838845_- | intronic |
| ADediting_1159865 | chr5_115838854_- | intronic |
| ADediting_1159866 | chr5_115838867_- | intronic |
| ADediting_1159867 | chr5_115838871_- | intronic |
| ADediting_1159868 | chr5_115838942_- | intronic |
| ADediting_1159869 | chr5_115838952_- | intronic |
| ADediting_1159870 | chr5_115838954_- | intronic |
| ADediting_1159871 | chr5_115838956_- | intronic |
| ADediting_1159872 | chr5_115838959_- | intronic |
| ADediting_1159873 | chr5_115838991_- | intronic |
| ADediting_1159874 | chr5_115839001_- | intronic |
| ADediting_1159875 | chr5_115839006_- | intronic |
| ADediting_1159876 | chr5_115839011_- | intronic |
| ADediting_1159877 | chr5_115839014_- | intronic |
| ADediting_1159878 | chr5_115839015_- | intronic |
| ADediting_1159879 | chr5_115839023_- | intronic |
| ADediting_1159880 | chr5_115839036_- | intronic |
| ADediting_1159881 | chr5_115839040_- | intronic |
| ADediting_1159882 | chr5_115839041_- | intronic |
| ADediting_1159883 | chr5_115839060_- | intronic |
| ADediting_1159884 | chr5_115839077_- | intronic |
| ADediting_1159885 | chr5_115839109_- | intronic |
| ADediting_1159886 | chr5_115840325_- | intronic |
| ADediting_1159887 | chr5_115840374_- | intronic |
| ADediting_1159888 | chr5_115840394_- | intronic |
| ADediting_1159889 | chr5_115840395_- | intronic |
| ADediting_1159890 | chr5_115840406_- | intronic |
| ADediting_1159891 | chr5_115840419_- | intronic |
| ADediting_1159892 | chr5_115840426_- | intronic |
| ADediting_1159893 | chr5_115840430_- | intronic |
| ADediting_1159894 | chr5_115840435_- | intronic |
| ADediting_1159895 | chr5_115840436_- | intronic |
| ADediting_1159896 | chr5_115840466_- | intronic |
| ADediting_1159897 | chr5_115840468_- | intronic |
| ADediting_1159898 | chr5_115840471_- | intronic |
| ADediting_1159899 | chr5_115840476_- | intronic |
| ADediting_1159900 | chr5_115840477_- | intronic |
| ADediting_1159901 | chr5_115840493_- | intronic |
| ADediting_1159902 | chr5_115840494_- | intronic |
| ADediting_1159903 | chr5_115840501_- | UTR3 |
| ADediting_1159904 | chr5_115840502_- | UTR3 |
| ADediting_1159905 | chr5_115840524_- | UTR3 |
| ADediting_1159906 | chr5_115840548_- | exonic |
| ADediting_1159907 | chr5_115840554_- | exonic |
| ADediting_1159908 | chr5_115840570_- | exonic |
| ADediting_1159909 | chr5_115840571_- | exonic |
| ADediting_1578746 | chr5_115830773_- | UTR3 |
| ADediting_1578747 | chr5_115830796_- | UTR3 |
| ADediting_1578748 | chr5_115838872_- | intronic |
| ADediting_1578749 | chr5_115838974_- | intronic |
| ADediting_1578750 | chr5_115838988_- | intronic |
| ADediting_1578751 | chr5_115838995_- | intronic |
| ADediting_1578752 | chr5_115840403_- | intronic |
| ADediting_1578753 | chr5_115840462_- | intronic |
| ADediting_1578754 | chr5_115840474_- | intronic |
| ADediting_1654209 | chr5_115829943_- | UTR3 |
| ADediting_1654210 | chr5_115830585_- | UTR3 |
| ADediting_1654211 | chr5_115830621_- | UTR3 |
| ADediting_1654212 | chr5_115830658_- | UTR3 |
| ADediting_1654213 | chr5_115830748_- | UTR3 |
| ADediting_1654214 | chr5_115830798_- | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1159845 | chr5_115829854_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159846 | chr5_115829866_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159847 | chr5_115829867_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159848 | chr5_115829894_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159849 | chr5_115829935_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159850 | chr5_115829968_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159851 | chr5_115830005_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159852 | chr5_115830034_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159853 | chr5_115830070_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159854 | chr5_115830073_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159855 | chr5_115830078_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159856 | chr5_115830603_- | SINE | Alu | Name=AluJr4 |
| ADediting_1159857 | chr5_115830635_- | SINE | Alu | Name=AluJr4 |
| ADediting_1159858 | chr5_115830653_- | SINE | Alu | Name=AluJr4 |
| ADediting_1159859 | chr5_115830712_- | SINE | Alu | Name=AluJr4 |
| ADediting_1159860 | chr5_115830713_- | SINE | Alu | Name=AluJr4 |
| ADediting_1159861 | chr5_115830789_- | SINE | Alu | Name=AluJr4 |
| ADediting_1159862 | chr5_115838832_- | SINE | Alu | Name=AluSz |
| ADediting_1159863 | chr5_115838844_- | SINE | Alu | Name=AluSz |
| ADediting_1159864 | chr5_115838845_- | SINE | Alu | Name=AluSz |
| ADediting_1159865 | chr5_115838854_- | SINE | Alu | Name=AluSz |
| ADediting_1159866 | chr5_115838867_- | SINE | Alu | Name=AluSz |
| ADediting_1159867 | chr5_115838871_- | SINE | Alu | Name=AluSz |
| ADediting_1159868 | chr5_115838942_- | SINE | Alu | Name=AluSz |
| ADediting_1159869 | chr5_115838952_- | SINE | Alu | Name=AluSz |
| ADediting_1159870 | chr5_115838954_- | SINE | Alu | Name=AluSz |
| ADediting_1159871 | chr5_115838956_- | SINE | Alu | Name=AluSz |
| ADediting_1159872 | chr5_115838959_- | SINE | Alu | Name=AluSz |
| ADediting_1159873 | chr5_115838991_- | SINE | Alu | Name=AluSz |
| ADediting_1159874 | chr5_115839001_- | SINE | Alu | Name=AluSz |
| ADediting_1159875 | chr5_115839006_- | SINE | Alu | Name=AluSz |
| ADediting_1159876 | chr5_115839011_- | SINE | Alu | Name=AluSz |
| ADediting_1159877 | chr5_115839014_- | SINE | Alu | Name=AluSz |
| ADediting_1159878 | chr5_115839015_- | SINE | Alu | Name=AluSz |
| ADediting_1159879 | chr5_115839023_- | SINE | Alu | Name=AluSz |
| ADediting_1159880 | chr5_115839036_- | SINE | Alu | Name=AluSz |
| ADediting_1159881 | chr5_115839040_- | SINE | Alu | Name=AluSz |
| ADediting_1159882 | chr5_115839041_- | SINE | Alu | Name=AluSz |
| ADediting_1159883 | chr5_115839060_- | SINE | Alu | Name=AluSz |
| ADediting_1159884 | chr5_115839077_- | SINE | Alu | Name=AluSz |
| ADediting_1159885 | chr5_115839109_- | SINE | Alu | Name=AluSz |
| ADediting_1159886 | chr5_115840325_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159887 | chr5_115840374_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159888 | chr5_115840394_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159889 | chr5_115840395_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159890 | chr5_115840406_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159891 | chr5_115840419_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159892 | chr5_115840426_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159893 | chr5_115840430_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159894 | chr5_115840435_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159895 | chr5_115840436_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159896 | chr5_115840466_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159897 | chr5_115840468_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159898 | chr5_115840471_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159899 | chr5_115840476_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159900 | chr5_115840477_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159901 | chr5_115840493_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159902 | chr5_115840494_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159903 | chr5_115840501_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159904 | chr5_115840502_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159905 | chr5_115840524_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159906 | chr5_115840548_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159907 | chr5_115840554_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159908 | chr5_115840570_- | SINE | Alu | Name=AluSq2 |
| ADediting_1159909 | chr5_115840571_- | SINE | Alu | Name=AluSq2 |
| ADediting_1578746 | chr5_115830773_- | SINE | Alu | Name=AluJr4 |
| ADediting_1578747 | chr5_115830796_- | SINE | Alu | Name=AluJr4 |
| ADediting_1578748 | chr5_115838872_- | SINE | Alu | Name=AluSz |
| ADediting_1578749 | chr5_115838974_- | SINE | Alu | Name=AluSz |
| ADediting_1578750 | chr5_115838988_- | SINE | Alu | Name=AluSz |
| ADediting_1578751 | chr5_115838995_- | SINE | Alu | Name=AluSz |
| ADediting_1578752 | chr5_115840403_- | SINE | Alu | Name=AluSq2 |
| ADediting_1578753 | chr5_115840462_- | SINE | Alu | Name=AluSq2 |
| ADediting_1578754 | chr5_115840474_- | SINE | Alu | Name=AluSq2 |
| ADediting_1654209 | chr5_115829943_- | SINE | Alu | Name=AluSq2 |
| ADediting_1654210 | chr5_115830585_- | SINE | Alu | Name=AluJr4 |
| ADediting_1654211 | chr5_115830621_- | SINE | Alu | Name=AluJr4 |
| ADediting_1654212 | chr5_115830658_- | SINE | Alu | Name=AluJr4 |
| ADediting_1654213 | chr5_115830748_- | SINE | Alu | Name=AluJr4 |
| ADediting_1654214 | chr5_115830798_- | SINE | Alu | Name=AluJr4 |
Top |
RNA A-to-I editing events in the alternative splicing sites for ATG12 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| ES | ADediting_1159901 | chr5_115840493_- | 115840491:115840499 | 5ss | 4i | ATGGTAAGA | 9.48 | ATGGTAGGA | 6.66 |
| ES | ADediting_1159901 | chr5_115840493_- | 115840491:115840499 | 5ss | 4i | ATGGTAAGA | 9.48 | ATGGTAGGA | 6.66 |
| ES | ADediting_1159901 | chr5_115840493_- | 115840491:115840499 | 5ss | 4i | ATGGTAAGA | 9.48 | ATGGTAGGA | 6.66 |
| ES | ADediting_1159901 | chr5_115840493_- | 115840491:115840499 | 5ss | 4i | ATGGTAAGA | 9.48 | ATGGTAGGA | 6.66 |
| ES | ADediting_1159901 | chr5_115840493_- | 115840491:115840499 | 5ss | 4i | ATGGTAAGA | 9.48 | ATGGTAGGA | 6.66 |
| ES | ADediting_1159902 | chr5_115840494_- | 115840491:115840499 | 5ss | 3i | ATGGTAAGA | 9.48 | ATGGTGAGA | 7.23 |
| ES | ADediting_1159902 | chr5_115840494_- | 115840491:115840499 | 5ss | 3i | ATGGTAAGA | 9.48 | ATGGTGAGA | 7.23 |
| ES | ADediting_1159902 | chr5_115840494_- | 115840491:115840499 | 5ss | 3i | ATGGTAAGA | 9.48 | ATGGTGAGA | 7.23 |
| ES | ADediting_1159902 | chr5_115840494_- | 115840491:115840499 | 5ss | 3i | ATGGTAAGA | 9.48 | ATGGTGAGA | 7.23 |
| ES | ADediting_1159902 | chr5_115840494_- | 115840491:115840499 | 5ss | 3i | ATGGTAAGA | 9.48 | ATGGTGAGA | 7.23 |
| ME1 | ADediting_1159901 | chr5_115840493_- | 115840491:115840499 | 5ss | 4i | ATGGTAAGA | 9.48 | ATGGTAGGA | 6.66 |
| ME1 | ADediting_1159901 | chr5_115840493_- | 115840491:115840499 | 5ss | 4i | ATGGTAAGA | 9.48 | ATGGTAGGA | 6.66 |
| ME1 | ADediting_1159901 | chr5_115840493_- | 115840491:115840499 | 5ss | 4i | ATGGTAAGA | 9.48 | ATGGTAGGA | 6.66 |
| ME1 | ADediting_1159901 | chr5_115840493_- | 115840491:115840499 | 5ss | 4i | ATGGTAAGA | 9.48 | ATGGTAGGA | 6.66 |
| ME1 | ADediting_1159901 | chr5_115840493_- | 115840491:115840499 | 5ss | 4i | ATGGTAAGA | 9.48 | ATGGTAGGA | 6.66 |
| ME1 | ADediting_1159902 | chr5_115840494_- | 115840491:115840499 | 5ss | 3i | ATGGTAAGA | 9.48 | ATGGTGAGA | 7.23 |
| ME1 | ADediting_1159902 | chr5_115840494_- | 115840491:115840499 | 5ss | 3i | ATGGTAAGA | 9.48 | ATGGTGAGA | 7.23 |
| ME1 | ADediting_1159902 | chr5_115840494_- | 115840491:115840499 | 5ss | 3i | ATGGTAAGA | 9.48 | ATGGTGAGA | 7.23 |
| ME1 | ADediting_1159902 | chr5_115840494_- | 115840491:115840499 | 5ss | 3i | ATGGTAAGA | 9.48 | ATGGTGAGA | 7.23 |
| ME1 | ADediting_1159902 | chr5_115840494_- | 115840491:115840499 | 5ss | 3i | ATGGTAAGA | 9.48 | ATGGTGAGA | 7.23 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATG12 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for ATG12 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
 |
Top |
The effects of the RNA editing to the miRNA binding sites for ATG12 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1159846 | chr5_115829866_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-3189-3p | chr5 | 115829865 | 115829871 | 7mer-m8 | 115829864 | 115829887 | 149 | -20.43 |
| ADediting_1159846 | chr5_115829866_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-6813-3p | chr5 | 115829864 | 115829870 | 7mer-m8 | 115829863 | 115829883 | 140 | -15.63 |
| ADediting_1159847 | chr5_115829867_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-326 | chr5 | 115829865 | 115829871 | 7mer-m8 | 115829864 | 115829883 | 140 | -14.14 |
| ADediting_1159847 | chr5_115829867_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-330-5p | chr5 | 115829865 | 115829871 | 7mer-m8 | 115829864 | 115829885 | 140 | -22.24 |
| ADediting_1159847 | chr5_115829867_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-4314 | chr5 | 115829866 | 115829872 | 7mer-m8 | 115829865 | 115829882 | 140 | -18.79 |
| ADediting_1159847 | chr5_115829867_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-514a-5p | chr5 | 115829864 | 115829870 | 7mer-m8 | 115829863 | 115829883 | 154 | -19.8 |
| ADediting_1159849 | chr5_115829935_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-5197-5p | chr5 | 115829930 | 115829936 | 7mer-m8 | 115829929 | 115829950 | 167 | -16.64 |
| ADediting_1159850 | chr5_115829968_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-548ae-3p | chr5 | 115829963 | 115829969 | 7mer-m8 | 115829962 | 115829982 | 141 | -4.46 |
| ADediting_1159850 | chr5_115829968_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-548ah-3p | chr5 | 115829963 | 115829969 | 7mer-m8 | 115829962 | 115829983 | 141 | -5.26 |
| ADediting_1159850 | chr5_115829968_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-548aj-3p | chr5 | 115829963 | 115829969 | 7mer-m8 | 115829962 | 115829982 | 141 | -5.36 |
| ADediting_1159850 | chr5_115829968_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-548am-3p | chr5 | 115829963 | 115829969 | 7mer-m8 | 115829962 | 115829983 | 141 | -4.53 |
| ADediting_1159850 | chr5_115829968_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-548aq-3p | chr5 | 115829963 | 115829969 | 7mer-m8 | 115829962 | 115829983 | 141 | -4.69 |
| ADediting_1159850 | chr5_115829968_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-548j-3p | chr5 | 115829963 | 115829969 | 7mer-m8 | 115829962 | 115829982 | 141 | -4.46 |
| ADediting_1159850 | chr5_115829968_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-548x-3p | chr5 | 115829963 | 115829969 | 7mer-m8 | 115829962 | 115829981 | 141 | -5.36 |
| ADediting_1159851 | chr5_115830005_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-4691-3p | chr5 | 115830001 | 115830007 | 7mer-m8 | 115830000 | 115830027 | 150 | -26.36 |
| ADediting_1159852 | chr5_115830034_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-3622a-3p | chr5 | 115830030 | 115830037 | 8mer-1a | 115830030 | 115830051 | 148 | -19.42 |
| ADediting_1159852 | chr5_115830034_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-3622b-3p | chr5 | 115830030 | 115830037 | 8mer-1a | 115830030 | 115830050 | 153 | -23.04 |
| ADediting_1159853 | chr5_115830070_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-6529-3p | chr5 | 115830070 | 115830076 | 7mer-m8 | 115830069 | 115830091 | 152 | -15.23 |
| ADediting_1159853 | chr5_115830070_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-6889-3p | chr5 | 115830070 | 115830076 | 7mer-m8 | 115830069 | 115830089 | 152 | -24.43 |
| ADediting_1159855 | chr5_115830078_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-139-5p | chr5 | 115830078 | 115830084 | 7mer-m8 | 115830077 | 115830100 | 150 | -16.81 |
| ADediting_1159855 | chr5_115830078_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-4252 | chr5 | 115830073 | 115830079 | 7mer-1a | 115830073 | 115830093 | 141 | -21.23 |
| ADediting_1159856 | chr5_115830603_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-891a-3p | chr5 | 115830599 | 115830605 | 7mer-m8 | 115830598 | 115830619 | 145 | -18.51 |
| ADediting_1159858 | chr5_115830653_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-1976 | chr5 | 115830650 | 115830656 | 7mer-m8 | 115830649 | 115830669 | 149 | -24.6 |
| ADediting_1159858 | chr5_115830653_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-660-3p | chr5 | 115830648 | 115830655 | 8mer-1a | 115830648 | 115830670 | 149 | -18.51 |
| ADediting_1159858 | chr5_115830653_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-6747-3p | chr5 | 115830651 | 115830658 | 8mer-1a | 115830651 | 115830667 | 146 | -24.72 |
| ADediting_1159859 | chr5_115830712_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-6747-3p | chr5 | 115830710 | 115830717 | 8mer-1a | 115830710 | 115830730 | 153 | -25.41 |
| ADediting_1159859 | chr5_115830712_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-6747-3p | chr5 | 115830710 | 115830717 | 8mer-1a | 115830710 | 115830730 | 153 | -25.41 |
| ADediting_1159861 | chr5_115830789_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-3199 | chr5 | 115830784 | 115830790 | 7mer-1a | 115830784 | 115830803 | 141 | -18.98 |
| ADediting_1159861 | chr5_115830789_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-3199 | chr5 | 115830784 | 115830790 | 7mer-1a | 115830784 | 115830803 | 141 | -18.98 |
| ADediting_1578746 | chr5_115830773_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-4290 | chr5 | 115830770 | 115830776 | 7mer-m8 | 115830769 | 115830787 | 140 | -14.16 |
| ADediting_1578746 | chr5_115830773_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-4687-5p | chr5 | 115830769 | 115830775 | 7mer-m8 | 115830768 | 115830789 | 145 | -21.58 |
| ADediting_1578746 | chr5_115830773_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-519d-5p | chr5 | 115830773 | 115830779 | 7mer-m8 | 115830772 | 115830796 | 159 | -19.69 |
| ADediting_1578746 | chr5_115830773_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-4290 | chr5 | 115830770 | 115830776 | 7mer-m8 | 115830769 | 115830787 | 140 | -14.16 |
| ADediting_1578746 | chr5_115830773_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-4687-5p | chr5 | 115830769 | 115830775 | 7mer-m8 | 115830768 | 115830789 | 145 | -21.58 |
| ADediting_1578746 | chr5_115830773_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-519d-5p | chr5 | 115830773 | 115830779 | 7mer-m8 | 115830772 | 115830796 | 159 | -19.69 |
| ADediting_1654209 | chr5_115829943_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-340-3p | chr5 | 115829942 | 115829948 | 7mer-m8 | 115829941 | 115829962 | 149 | -20.18 |
| ADediting_1654209 | chr5_115829943_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-6827-3p | chr5 | 115829942 | 115829948 | 7mer-m8 | 115829941 | 115829961 | 149 | -16.56 |
| ADediting_1654210 | chr5_115830585_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-4530 | chr5 | 115830585 | 115830591 | 7mer-m8 | 115830584 | 115830601 | 156 | -26.31 |
| ADediting_1654212 | chr5_115830658_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-210-5p | chr5 | 115830654 | 115830661 | 8mer-1a | 115830654 | 115830675 | 145 | -18.7 |
| ADediting_1654212 | chr5_115830658_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-6801-3p | chr5 | 115830656 | 115830662 | 7mer-m8 | 115830655 | 115830674 | 146 | -17.49 |
| ADediting_1654212 | chr5_115830658_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-6810-3p | chr5 | 115830656 | 115830662 | 7mer-m8 | 115830655 | 115830677 | 152 | -20.23 |
| ADediting_1654213 | chr5_115830748_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-6878-3p | chr5 | 115830744 | 115830750 | 7mer-m8 | 115830743 | 115830764 | 149 | -20.04 |
| ADediting_1654213 | chr5_115830748_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-6878-3p | chr5 | 115830744 | 115830750 | 7mer-m8 | 115830743 | 115830764 | 149 | -20.04 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1159847 | chr5_115829867_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-887-5p | chr5 | 115829866 | 115829873 | 8mer-1a | 115829866 | 115829886 | 147 | -13.95 |
| ADediting_1159848 | chr5_115829894_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-3622a-3p | chr5 | 115829889 | 115829896 | 8mer-1a | 115829889 | 115829910 | 144 | -13.55 |
| ADediting_1159848 | chr5_115829894_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-3622b-3p | chr5 | 115829889 | 115829896 | 8mer-1a | 115829889 | 115829909 | 152 | -18.18 |
| ADediting_1159848 | chr5_115829894_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-544b | chr5 | 115829892 | 115829898 | 7mer-m8 | 115829891 | 115829912 | 151 | -18.75 |
| ADediting_1159848 | chr5_115829894_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-7162-3p | chr5 | 115829893 | 115829899 | 7mer-m8 | 115829892 | 115829910 | 149 | -20.65 |
| ADediting_1159851 | chr5_115830005_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-5690 | chr5 | 115830001 | 115830007 | 7mer-m8 | 115830000 | 115830020 | 145 | -17.72 |
| ADediting_1159852 | chr5_115830034_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-3614-5p | chr5 | 115830030 | 115830036 | 7mer-1a | 115830030 | 115830052 | 144 | -22.44 |
| ADediting_1159855 | chr5_115830078_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-10399-5p | chr5 | 115830077 | 115830083 | 7mer-m8 | 115830076 | 115830097 | 146 | -11.69 |
| ADediting_1159856 | chr5_115830603_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-150-3p | chr5 | 115830600 | 115830606 | 7mer-m8 | 115830599 | 115830620 | 148 | -14.12 |
| ADediting_1159857 | chr5_115830635_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-10400-3p | chr5 | 115830635 | 115830641 | 7mer-m8 | 115830634 | 115830655 | 144 | -22.71 |
| ADediting_1159857 | chr5_115830635_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-4674 | chr5 | 115830635 | 115830641 | 7mer-m8 | 115830634 | 115830654 | 151 | -25.37 |
| ADediting_1159858 | chr5_115830653_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-6881-3p | chr5 | 115830648 | 115830654 | 7mer-m8 | 115830647 | 115830668 | 149 | -15.33 |
| ADediting_1159861 | chr5_115830789_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-10399-5p | chr5 | 115830788 | 115830794 | 7mer-m8 | 115830787 | 115830808 | 144 | -9.71 |
| ADediting_1159861 | chr5_115830789_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-5089-5p | chr5 | 115830784 | 115830790 | 7mer-m8 | 115830783 | 115830804 | 148 | -13.62 |
| ADediting_1159861 | chr5_115830789_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-6504-3p | chr5 | 115830788 | 115830794 | 7mer-m8 | 115830787 | 115830808 | 145 | -14.48 |
| ADediting_1159861 | chr5_115830789_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-10399-5p | chr5 | 115830788 | 115830794 | 7mer-m8 | 115830787 | 115830808 | 144 | -9.71 |
| ADediting_1159861 | chr5_115830789_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-5089-5p | chr5 | 115830784 | 115830790 | 7mer-m8 | 115830783 | 115830804 | 148 | -13.62 |
| ADediting_1159861 | chr5_115830789_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-6504-3p | chr5 | 115830788 | 115830794 | 7mer-m8 | 115830787 | 115830808 | 145 | -14.48 |
| ADediting_1578746 | chr5_115830773_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-4297 | chr5 | 115830770 | 115830776 | 7mer-m8 | 115830769 | 115830784 | 142 | -15.84 |
| ADediting_1578746 | chr5_115830773_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-5581-5p | chr5 | 115830770 | 115830776 | 7mer-m8 | 115830769 | 115830789 | 153 | -23.46 |
| ADediting_1578746 | chr5_115830773_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-4297 | chr5 | 115830770 | 115830776 | 7mer-m8 | 115830769 | 115830784 | 142 | -15.84 |
| ADediting_1578746 | chr5_115830773_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-5581-5p | chr5 | 115830770 | 115830776 | 7mer-m8 | 115830769 | 115830789 | 153 | -23.46 |
| ADediting_1578747 | chr5_115830796_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-3934-5p | chr5 | 115830792 | 115830798 | 7mer-m8 | 115830791 | 115830813 | 147 | -18.32 |
| ADediting_1578747 | chr5_115830796_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-552-3p | chr5 | 115830790 | 115830797 | 8mer-1a | 115830790 | 115830810 | 140 | -15.03 |
| ADediting_1578747 | chr5_115830796_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-3934-5p | chr5 | 115830792 | 115830798 | 7mer-m8 | 115830791 | 115830813 | 147 | -18.32 |
| ADediting_1578747 | chr5_115830796_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-552-3p | chr5 | 115830790 | 115830797 | 8mer-1a | 115830790 | 115830810 | 140 | -15.03 |
| ADediting_1654209 | chr5_115829943_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-10a-5p | chr5 | 115829939 | 115829945 | 7mer-m8 | 115829938 | 115829960 | 141 | -19.05 |
| ADediting_1654209 | chr5_115829943_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-10b-5p | chr5 | 115829939 | 115829945 | 7mer-m8 | 115829938 | 115829960 | 140 | -16.12 |
| ADediting_1654209 | chr5_115829943_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-339-5p | chr5 | 115829940 | 115829946 | 7mer-m8 | 115829939 | 115829960 | 151 | -20.51 |
| ADediting_1654209 | chr5_115829943_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-4421 | chr5 | 115829941 | 115829947 | 7mer-m8 | 115829940 | 115829963 | 151 | -15.12 |
| ADediting_1654209 | chr5_115829943_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-5699-3p | chr5 | 115829941 | 115829947 | 7mer-m8 | 115829940 | 115829961 | 149 | -16.8 |
| ADediting_1654209 | chr5_115829943_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-6732-3p | chr5 | 115829938 | 115829944 | 7mer-m8 | 115829937 | 115829959 | 155 | -19.9 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1159863 | chr5_115838844_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-1228-3p | chr5 | 115838839 | 115838845 | 7mer-m8 | 115838838 | 115838857 | 140 | -14.15 |
| ADediting_1159863 | chr5_115838844_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-3189-3p | chr5 | 115838843 | 115838849 | 7mer-m8 | 115838842 | 115838861 | 149 | -25.49 |
| ADediting_1159863 | chr5_115838844_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-6813-3p | chr5 | 115838842 | 115838848 | 7mer-m8 | 115838841 | 115838861 | 140 | -11.59 |
| ADediting_1159864 | chr5_115838845_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-326 | chr5 | 115838843 | 115838849 | 7mer-m8 | 115838842 | 115838861 | 140 | -13.96 |
| ADediting_1159864 | chr5_115838845_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-330-5p | chr5 | 115838843 | 115838849 | 7mer-m8 | 115838842 | 115838865 | 143 | -22.06 |
| ADediting_1159864 | chr5_115838845_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4314 | chr5 | 115838844 | 115838850 | 7mer-m8 | 115838843 | 115838861 | 143 | -24.03 |
| ADediting_1159864 | chr5_115838845_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-514a-5p | chr5 | 115838842 | 115838848 | 7mer-m8 | 115838841 | 115838864 | 150 | -18.62 |
| ADediting_1159865 | chr5_115838854_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-6089 | chr5 | 115838849 | 115838855 | 7mer-m8 | 115838848 | 115838870 | 168 | -39.94 |
| ADediting_1159866 | chr5_115838867_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-1255b-2-3p | chr5 | 115838866 | 115838872 | 7mer-m8 | 115838865 | 115838886 | 140 | -8.7 |
| ADediting_1159866 | chr5_115838867_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4751 | chr5 | 115838862 | 115838868 | 7mer-m8 | 115838861 | 115838884 | 150 | -17.81 |
| ADediting_1159867 | chr5_115838871_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-3622a-3p | chr5 | 115838867 | 115838874 | 8mer-1a | 115838867 | 115838888 | 144 | -13.55 |
| ADediting_1159867 | chr5_115838871_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-3622b-3p | chr5 | 115838867 | 115838874 | 8mer-1a | 115838867 | 115838887 | 153 | -19.33 |
| ADediting_1159867 | chr5_115838871_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-544b | chr5 | 115838870 | 115838876 | 7mer-m8 | 115838869 | 115838889 | 157 | -19.04 |
| ADediting_1159867 | chr5_115838871_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-7162-3p | chr5 | 115838871 | 115838877 | 7mer-m8 | 115838870 | 115838890 | 142 | -17.47 |
| ADediting_1159869 | chr5_115838952_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-1224-3p | chr5 | 115838948 | 115838954 | 7mer-m8 | 115838947 | 115838967 | 149 | -22.51 |
| ADediting_1159875 | chr5_115839006_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-7977 | chr5 | 115839004 | 115839010 | 7mer-m8 | 115839003 | 115839020 | 142 | -12.93 |
| ADediting_1159876 | chr5_115839011_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-3157-5p | chr5 | 115839006 | 115839012 | 7mer-m8 | 115839005 | 115839023 | 142 | -16.32 |
| ADediting_1159876 | chr5_115839011_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-3614-5p | chr5 | 115839011 | 115839017 | 7mer-m8 | 115839010 | 115839033 | 148 | -24.19 |
| ADediting_1159876 | chr5_115839011_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4691-3p | chr5 | 115839006 | 115839013 | 8mer-1a | 115839006 | 115839033 | 155 | -22.97 |
| ADediting_1159878 | chr5_115839015_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-6771-5p | chr5 | 115839014 | 115839020 | 7mer-m8 | 115839013 | 115839032 | 160 | -33.86 |
| ADediting_1159879 | chr5_115839023_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-6089 | chr5 | 115839018 | 115839024 | 7mer-m8 | 115839017 | 115839041 | 165 | -37.52 |
| ADediting_1159881 | chr5_115839040_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4293 | chr5 | 115839036 | 115839043 | 8mer-1a | 115839036 | 115839054 | 146 | -14.91 |
| ADediting_1159883 | chr5_115839060_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-17-3p | chr5 | 115839060 | 115839066 | 7mer-m8 | 115839059 | 115839080 | 155 | -17.18 |
| ADediting_1159883 | chr5_115839060_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-485-5p | chr5 | 115839056 | 115839062 | 7mer-m8 | 115839055 | 115839075 | 153 | -18 |
| ADediting_1159883 | chr5_115839060_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-6884-5p | chr5 | 115839056 | 115839062 | 7mer-m8 | 115839055 | 115839078 | 146 | -21.26 |
| ADediting_1159885 | chr5_115839109_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4523 | chr5 | 115839107 | 115839113 | 7mer-m8 | 115839106 | 115839126 | 155 | -23.8 |
| ADediting_1159908 | chr5_115840570_- | ENSG00000145782.13 | ENST00000514775.1 | ATG12-213 | hsa-miR-3199 | chr5 | 115840565 | 115840571 | 7mer-1a | 115840565 | 115840584 | 141 | -22.83 |
| ADediting_1159909 | chr5_115840571_- | ENSG00000145782.13 | ENST00000514775.1 | ATG12-213 | hsa-miR-513a-5p | chr5 | 115840570 | 115840576 | 7mer-m8 | 115840569 | 115840586 | 148 | -20.07 |
| ADediting_1159909 | chr5_115840571_- | ENSG00000145782.13 | ENST00000514775.1 | ATG12-213 | hsa-miR-638 | chr5 | 115840565 | 115840571 | 7mer-1a | 115840565 | 115840589 | 151 | -32.12 |
| ADediting_1578750 | chr5_115838988_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4746-3p | chr5 | 115838987 | 115838993 | 7mer-m8 | 115838986 | 115839008 | 144 | -21.09 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1159863 | chr5_115838844_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-216b-3p | chr5 | 115838839 | 115838845 | 7mer-m8 | 115838838 | 115838861 | 140 | -10.86 |
| ADediting_1159864 | chr5_115838845_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-887-5p | chr5 | 115838844 | 115838851 | 8mer-1a | 115838844 | 115838863 | 143 | -15.14 |
| ADediting_1159865 | chr5_115838854_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4478 | chr5 | 115838850 | 115838856 | 7mer-m8 | 115838849 | 115838867 | 150 | -25.92 |
| ADediting_1159865 | chr5_115838854_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4649-3p | chr5 | 115838853 | 115838859 | 7mer-m8 | 115838852 | 115838872 | 140 | -14.11 |
| ADediting_1159865 | chr5_115838854_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-485-5p | chr5 | 115838849 | 115838855 | 7mer-m8 | 115838848 | 115838870 | 153 | -16.98 |
| ADediting_1159865 | chr5_115838854_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-7160-5p | chr5 | 115838852 | 115838858 | 7mer-m8 | 115838851 | 115838871 | 146 | -17.63 |
| ADediting_1159869 | chr5_115838952_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-3675-3p | chr5 | 115838951 | 115838957 | 7mer-m8 | 115838950 | 115838971 | 145 | -12.58 |
| ADediting_1159870 | chr5_115838954_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-3675-3p | chr5 | 115838951 | 115838957 | 7mer-m8 | 115838950 | 115838971 | 145 | -12.58 |
| ADediting_1159871 | chr5_115838956_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-3675-3p | chr5 | 115838951 | 115838957 | 7mer-m8 | 115838950 | 115838971 | 145 | -12.58 |
| ADediting_1159875 | chr5_115839006_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-6787-3p | chr5 | 115839004 | 115839011 | 8mer-1a | 115839004 | 115839025 | 151 | -18.78 |
| ADediting_1159876 | chr5_115839011_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-5690 | chr5 | 115839006 | 115839013 | 8mer-1a | 115839006 | 115839026 | 145 | -17.08 |
| ADediting_1159877 | chr5_115839014_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-12126 | chr5 | 115839011 | 115839018 | 8mer-1a | 115839011 | 115839034 | 147 | -16.24 |
| ADediting_1159877 | chr5_115839014_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-887-5p | chr5 | 115839014 | 115839020 | 7mer-m8 | 115839013 | 115839030 | 150 | -21.51 |
| ADediting_1159878 | chr5_115839015_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-12126 | chr5 | 115839011 | 115839018 | 8mer-1a | 115839011 | 115839034 | 147 | -16.24 |
| ADediting_1159878 | chr5_115839015_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-1273h-5p | chr5 | 115839014 | 115839021 | 8mer-1a | 115839014 | 115839034 | 153 | -19.47 |
| ADediting_1159878 | chr5_115839015_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-30b-3p | chr5 | 115839014 | 115839021 | 8mer-1a | 115839014 | 115839035 | 148 | -16.41 |
| ADediting_1159878 | chr5_115839015_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-3689a-3p | chr5 | 115839014 | 115839021 | 8mer-1a | 115839014 | 115839034 | 154 | -20.38 |
| ADediting_1159878 | chr5_115839015_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-3689b-3p | chr5 | 115839014 | 115839021 | 8mer-1a | 115839014 | 115839034 | 154 | -20.03 |
| ADediting_1159878 | chr5_115839015_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-3689c | chr5 | 115839014 | 115839021 | 8mer-1a | 115839014 | 115839034 | 154 | -20.03 |
| ADediting_1159878 | chr5_115839015_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-6779-5p | chr5 | 115839014 | 115839021 | 8mer-1a | 115839014 | 115839032 | 148 | -22.74 |
| ADediting_1159878 | chr5_115839015_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-887-5p | chr5 | 115839014 | 115839020 | 7mer-m8 | 115839013 | 115839030 | 150 | -21.51 |
| ADediting_1159879 | chr5_115839023_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-3929 | chr5 | 115839019 | 115839025 | 7mer-m8 | 115839018 | 115839044 | 144 | -20.32 |
| ADediting_1159879 | chr5_115839023_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4329 | chr5 | 115839022 | 115839028 | 7mer-m8 | 115839021 | 115839039 | 140 | -10.08 |
| ADediting_1159879 | chr5_115839023_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4478 | chr5 | 115839019 | 115839025 | 7mer-m8 | 115839018 | 115839034 | 151 | -21.59 |
| ADediting_1159879 | chr5_115839023_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-485-5p | chr5 | 115839018 | 115839024 | 7mer-m8 | 115839017 | 115839038 | 149 | -17.05 |
| ADediting_1159883 | chr5_115839060_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-377-5p | chr5 | 115839056 | 115839062 | 7mer-m8 | 115839055 | 115839072 | 151 | -19.67 |
| ADediting_1159883 | chr5_115839060_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-6086 | chr5 | 115839056 | 115839062 | 7mer-m8 | 115839055 | 115839074 | 146 | -22.04 |
| ADediting_1159885 | chr5_115839109_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4329 | chr5 | 115839108 | 115839114 | 7mer-m8 | 115839107 | 115839127 | 142 | -13.54 |
| ADediting_1159885 | chr5_115839109_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4494 | chr5 | 115839104 | 115839110 | 7mer-m8 | 115839103 | 115839124 | 148 | -17.49 |
| ADediting_1159885 | chr5_115839109_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-4499 | chr5 | 115839105 | 115839111 | 7mer-m8 | 115839104 | 115839120 | 150 | -14.54 |
| ADediting_1159885 | chr5_115839109_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-6857-3p | chr5 | 115839106 | 115839112 | 7mer-m8 | 115839105 | 115839126 | 153 | -17.56 |
| ADediting_1159908 | chr5_115840570_- | ENSG00000145782.13 | ENST00000514775.1 | ATG12-213 | hsa-miR-10399-5p | chr5 | 115840569 | 115840575 | 7mer-m8 | 115840568 | 115840589 | 148 | -11.2 |
| ADediting_1159908 | chr5_115840570_- | ENSG00000145782.13 | ENST00000514775.1 | ATG12-213 | hsa-miR-6504-3p | chr5 | 115840569 | 115840575 | 7mer-m8 | 115840568 | 115840589 | 153 | -14.35 |
| ADediting_1159909 | chr5_115840571_- | ENSG00000145782.13 | ENST00000514775.1 | ATG12-213 | hsa-miR-10399-5p | chr5 | 115840569 | 115840575 | 7mer-m8 | 115840568 | 115840589 | 148 | -11.2 |
| ADediting_1159909 | chr5_115840571_- | ENSG00000145782.13 | ENST00000514775.1 | ATG12-213 | hsa-miR-6504-3p | chr5 | 115840569 | 115840575 | 7mer-m8 | 115840568 | 115840589 | 153 | -14.35 |
| ADediting_1578749 | chr5_115838974_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-374c-3p | chr5 | 115838972 | 115838978 | 7mer-m8 | 115838971 | 115838992 | 151 | -14.31 |
| ADediting_1578749 | chr5_115838974_- | ENSG00000145782.13 | ENST00000509598.5 | ATG12-207 | hsa-miR-5582-3p | chr5 | 115838969 | 115838975 | 7mer-m8 | 115838968 | 115838992 | 147 | -12.45 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1391023 | chr8_140732605_- | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-151a-3p | chr5 | 115831335 | 115831341 | 7mer-m8 | 115831334 | 115831355 | 146 | -17.42 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-151a-3p | chr5 | 115831335 | 115831341 | 7mer-m8 | 115831334 | 115831355 | 146 | -17.42 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-556-3p | chr5 | 115828321 | 115828327 | 7mer-m8 | 115828320 | 115828341 | 153 | -18.03 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-641 | chr5 | 115828239 | 115828246 | 8mer-1a | 115828239 | 115828262 | 160 | -19.23 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000145782.13 | ENST00000500945.2 | ATG12-202 | hsa-miR-4775 | chr5 | 115831787 | 115831794 | 8mer-1a | 115831787 | 115831808 | 164 | -12.74 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-5688 | chr5 | 115828282 | 115828288 | 7mer-m8 | 115828281 | 115828302 | 140 | -9.03 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-5585-3p | chr5 | 115829141 | 115829147 | 7mer-m8 | 115829140 | 115829161 | 150 | -12.99 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000145782.13 | ENST00000509910.2 | ATG12-208 | hsa-miR-5585-3p | chr5 | 115829141 | 115829147 | 7mer-m8 | 115829140 | 115829161 | 150 | -12.99 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for ATG12 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000509910.2 | protein_coding |  |  |
| ENST00000500945.2 | protein_coding |  |  |
| ENST00000509598.5 | lncRNA |  |  |
| ENST00000514775.1 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1159845 | ENST00000509910.2 | chr5_115829854_- | 2386 | -1080.62 | -1083.62 | -1138.92 |
| ADediting_1159846 | ENST00000509910.2 | chr5_115829866_- | 2374 | -1083.32 | -1083.62 | -1138.92 |
| ADediting_1159847 | ENST00000509910.2 | chr5_115829867_- | 2373 | -1083.72 | -1083.62 | -1138.92 |
| ADediting_1159848 | ENST00000509910.2 | chr5_115829894_- | 2346 | -1082.92 | -1083.62 | -1138.92 |
| ADediting_1159849 | ENST00000509910.2 | chr5_115829935_- | 2305 | -1090.32 | -1083.62 | -1138.92 |
| ADediting_1654209 | ENST00000509910.2 | chr5_115829943_- | 2297 | -1087.82 | -1083.62 | -1138.92 |
| ADediting_1159850 | ENST00000509910.2 | chr5_115829968_- | 2272 | -1083.62 | -1083.62 | -1138.92 |
| ADediting_1159851 | ENST00000509910.2 | chr5_115830005_- | 2235 | -1087.02 | -1083.62 | -1138.92 |
| ADediting_1159852 | ENST00000509910.2 | chr5_115830034_- | 2206 | -1090.22 | -1083.62 | -1138.92 |
| ADediting_1159853 | ENST00000509910.2 | chr5_115830070_- | 2170 | -1083.62 | -1083.62 | -1138.92 |
| ADediting_1159854 | ENST00000509910.2 | chr5_115830073_- | 2167 | -1083.92 | -1083.62 | -1138.92 |
| ADediting_1159855 | ENST00000509910.2 | chr5_115830078_- | 2162 | -1089.82 | -1083.62 | -1138.92 |
| ADediting_1654210 | ENST00000509910.2 | chr5_115830585_- | 1655 | -1090.52 | -1083.62 | -1138.92 |
| ADediting_1159856 | ENST00000509910.2 | chr5_115830603_- | 1637 | -1090.32 | -1083.62 | -1138.92 |
| ADediting_1654211 | ENST00000509910.2 | chr5_115830621_- | 1619 | -1088.72 | -1083.62 | -1138.92 |
| ADediting_1159857 | ENST00000509910.2 | chr5_115830635_- | 1605 | -1089.82 | -1083.62 | -1138.92 |
| ADediting_1159858 | ENST00000509910.2 | chr5_115830653_- | 1587 | -1090.22 | -1083.62 | -1138.92 |
| ADediting_1654212 | ENST00000509910.2 | chr5_115830658_- | 1582 | -1082.72 | -1083.62 | -1138.92 |
| ADediting_1159859 | ENST00000509910.2 | chr5_115830712_- | 1528 | -1083.22 | -1083.62 | -1138.92 |
| ADediting_1159860 | ENST00000509910.2 | chr5_115830713_- | 1527 | -1084.02 | -1083.62 | -1138.92 |
| ADediting_1654213 | ENST00000509910.2 | chr5_115830748_- | 1492 | -1088.62 | -1083.62 | -1138.92 |
| ADediting_1578746 | ENST00000509910.2 | chr5_115830773_- | 1467 | -1083.62 | -1083.62 | -1138.92 |
| ADediting_1159861 | ENST00000509910.2 | chr5_115830789_- | 1451 | -1083.62 | -1083.62 | -1138.92 |
| ADediting_1578747 | ENST00000509910.2 | chr5_115830796_- | 1444 | -1083.22 | -1083.62 | -1138.92 |
| ADediting_1654214 | ENST00000509910.2 | chr5_115830798_- | 1442 | -1082.62 | -1083.62 | -1138.92 |
| ADediting_1159859 | ENST00000500945.2 | chr5_115830712_- | 1391 | -376.10 | -375.40 | -377.30 |
| ADediting_1159860 | ENST00000500945.2 | chr5_115830713_- | 1390 | -376.80 | -375.40 | -377.30 |
| ADediting_1654213 | ENST00000500945.2 | chr5_115830748_- | 1355 | -375.10 | -375.40 | -377.30 |
| ADediting_1578746 | ENST00000500945.2 | chr5_115830773_- | 1330 | -375.40 | -375.40 | -377.30 |
| ADediting_1159861 | ENST00000500945.2 | chr5_115830789_- | 1314 | -375.40 | -375.40 | -377.30 |
| ADediting_1578747 | ENST00000500945.2 | chr5_115830796_- | 1307 | -375.00 | -375.40 | -377.30 |
| ADediting_1654214 | ENST00000500945.2 | chr5_115830798_- | 1305 | -375.40 | -375.40 | -377.30 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1159862 | ENST00000509598.5 | chr5_115838832_- | 663 | -533.30 | -530.70 | -556.20 |
| ADediting_1159863 | ENST00000509598.5 | chr5_115838844_- | 651 | -534.40 | -530.70 | -556.20 |
| ADediting_1159864 | ENST00000509598.5 | chr5_115838845_- | 650 | -534.00 | -530.70 | -556.20 |
| ADediting_1159865 | ENST00000509598.5 | chr5_115838854_- | 641 | -531.90 | -530.70 | -556.20 |
| ADediting_1159866 | ENST00000509598.5 | chr5_115838867_- | 628 | -533.10 | -530.70 | -556.20 |
| ADediting_1159867 | ENST00000509598.5 | chr5_115838871_- | 624 | -532.50 | -530.70 | -556.20 |
| ADediting_1578748 | ENST00000509598.5 | chr5_115838872_- | 623 | -530.80 | -530.70 | -556.20 |
| ADediting_1159868 | ENST00000509598.5 | chr5_115838942_- | 553 | -531.00 | -530.70 | -556.20 |
| ADediting_1159869 | ENST00000509598.5 | chr5_115838952_- | 543 | -532.00 | -530.70 | -556.20 |
| ADediting_1159870 | ENST00000509598.5 | chr5_115838954_- | 541 | -530.60 | -530.70 | -556.20 |
| ADediting_1159871 | ENST00000509598.5 | chr5_115838956_- | 539 | -530.80 | -530.70 | -556.20 |
| ADediting_1159872 | ENST00000509598.5 | chr5_115838959_- | 536 | -534.10 | -530.70 | -556.20 |
| ADediting_1578749 | ENST00000509598.5 | chr5_115838974_- | 521 | -531.80 | -530.70 | -556.20 |
| ADediting_1578750 | ENST00000509598.5 | chr5_115838988_- | 507 | -530.50 | -530.70 | -556.20 |
| ADediting_1159873 | ENST00000509598.5 | chr5_115838991_- | 504 | -531.40 | -530.70 | -556.20 |
| ADediting_1578751 | ENST00000509598.5 | chr5_115838995_- | 500 | -533.80 | -530.70 | -556.20 |
| ADediting_1159874 | ENST00000509598.5 | chr5_115839001_- | 494 | -531.10 | -530.70 | -556.20 |
| ADediting_1159875 | ENST00000509598.5 | chr5_115839006_- | 489 | -529.80 | -530.70 | -556.20 |
| ADediting_1159876 | ENST00000509598.5 | chr5_115839011_- | 484 | -535.00 | -530.70 | -556.20 |
| ADediting_1159877 | ENST00000509598.5 | chr5_115839014_- | 481 | -531.90 | -530.70 | -556.20 |
| ADediting_1159878 | ENST00000509598.5 | chr5_115839015_- | 480 | -530.70 | -530.70 | -556.20 |
| ADediting_1159879 | ENST00000509598.5 | chr5_115839023_- | 472 | -530.00 | -530.70 | -556.20 |
| ADediting_1159880 | ENST00000509598.5 | chr5_115839036_- | 459 | -530.00 | -530.70 | -556.20 |
| ADediting_1159881 | ENST00000509598.5 | chr5_115839040_- | 455 | -531.70 | -530.70 | -556.20 |
| ADediting_1159882 | ENST00000509598.5 | chr5_115839041_- | 454 | -532.40 | -530.70 | -556.20 |
| ADediting_1159883 | ENST00000509598.5 | chr5_115839060_- | 435 | -530.70 | -530.70 | -556.20 |
| ADediting_1159884 | ENST00000509598.5 | chr5_115839077_- | 418 | -531.40 | -530.70 | -556.20 |
| ADediting_1159885 | ENST00000509598.5 | chr5_115839109_- | 386 | -530.00 | -530.70 | -556.20 |
| ADediting_1159907 | ENST00000514775.1 | chr5_115840554_- | 551 | -154.90 | -152.10 | -157.90 |
| ADediting_1159908 | ENST00000514775.1 | chr5_115840570_- | 535 | -152.20 | -152.10 | -157.90 |
| ADediting_1159909 | ENST00000514775.1 | chr5_115840571_- | 534 | -154.20 | -152.10 | -157.90 |
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Relation with ADAR for ATG12 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1159855 | chr5_115830078_- | 4.47978701160694e-06 | 0.257210560302402 | 1.58538921173088e-09 | 0.334231599004771 | 0.645113422889295 | 0.0262596921702051 |
| CER | ADediting_1159855 | chr5_115830078_- | 9.19573496034701e-05 | 0.313841867800266 | 1.22548960748935e-10 | 0.494805920385257 | 0.202101973694 | 0.104740621331782 |
| TCX | ADediting_1159855 | chr5_115830078_- | 0.535436688846212 | 0.0509942559813514 | 3.28931375049999e-05 | 0.332148273089669 | 0.0104466282645019 | -0.208519830642335 |
| STG | ADediting_1159855 | chr5_115830078_- | 6.90157898336852e-05 | 0.420228991716491 | 0.00131730042304077 | 0.344829061724498 | 0.431458950718168 | -0.0869761358809634 |
| CER | ADediting_1159858 | chr5_115830653_- | 1.93408568270491e-08 | 0.438874480266914 | 1.50347118726013e-12 | 0.536370033318207 | 0.0894459464458275 | 0.139156460272218 |
| DLPFC | ADediting_1159862 | chr5_115838832_- | 0.113725543552527 | 0.0900138516547256 | 0.528855412231312 | -0.03590113475713 | 4.48376033611744e-15 | 0.425673958471595 |
| CER | ADediting_1159862 | chr5_115838832_- | 6.78572963637383e-13 | 0.543315885299762 | 1.46199130640765e-10 | 0.493016438468223 | 0.229525787922718 | 0.0986946048079586 |
| CER | ADediting_1159863 | chr5_115838844_- | 1.69457345914732e-05 | 0.343369225094863 | 2.07004858235134e-05 | 0.340028596136273 | 0.960325885663823 | 0.00409587959798888 |
| CER | ADediting_1159865 | chr5_115838854_- | 3.83661079808926e-09 | 0.457867941487677 | 1.76900870511605e-08 | 0.439952851954011 | 0.475393334357387 | 0.0587168058651969 |
| DLPFC | ADediting_1159867 | chr5_115838871_- | 0.0939877605389681 | 0.0952865103992151 | 0.493479677554156 | -0.0390360369107697 | 7.69080824669246e-11 | 0.35862972640782 |
| CER | ADediting_1159867 | chr5_115838871_- | 1.11833851336209e-11 | 0.518112174832826 | 2.51288075149748e-08 | 0.435688253499858 | 0.374565293565122 | 0.0730151442087644 |
| DLPFC | ADediting_1159868 | chr5_115838942_- | 0.000709715362291364 | 0.191294330703679 | 0.390442616621707 | 0.0489458989952769 | 1.36836823664961e-17 | 0.459394776078219 |
| CER | ADediting_1159868 | chr5_115838942_- | 1.0039922663372e-08 | 0.446713402504226 | 2.83196728718049e-07 | 0.404537518661605 | 0.361925675064396 | 0.0749624371393048 |
| DLPFC | ADediting_1159871 | chr5_115838956_- | 0.0263011640933922 | 0.126191054511661 | 0.706031918426591 | -0.0215073964584833 | 1.81787455388868e-17 | 0.45782536256641 |
| CER | ADediting_1159871 | chr5_115838956_- | 2.82217183383575e-10 | 0.486253996948105 | 4.28990240225563e-06 | 0.365328480003066 | 0.627242657027078 | 0.0399685163459008 |
| CER | ADediting_1159872 | chr5_115838959_- | 1.42566460564473e-09 | 0.468943420825468 | 1.16569889736912e-05 | 0.34951313673113 | 0.976677039520254 | -0.00240717458244642 |
| CER | ADediting_1159873 | chr5_115838991_- | 2.05389362353489e-05 | 0.340160091424711 | 0.000205409567512667 | 0.298656308114945 | 0.99077373515903 | 0.000952134228494268 |
| DLPFC | ADediting_1159874 | chr5_115839001_- | 0.358790180342623 | 0.0522959033519419 | 0.204238111570044 | -0.0723043682678062 | 3.66603683814935e-08 | 0.306416060207699 |
| CER | ADediting_1159874 | chr5_115839001_- | 2.19704229096079e-05 | 0.3390273565093 | 0.000110364833893482 | 0.310465747394133 | 0.907879006799302 | -0.00952751741690247 |
| DLPFC | ADediting_1159875 | chr5_115839006_- | 0.263285591806324 | 0.0637284126648548 | 0.166400630285316 | -0.0787941560160305 | 9.39195498113115e-14 | 0.406333633133381 |
| CER | ADediting_1159875 | chr5_115839006_- | 5.26259434348104e-06 | 0.362163137750308 | 0.000111162239794153 | 0.310331708557663 | 0.903860639305518 | -0.00994507682943004 |
| DLPFC | ADediting_1159876 | chr5_115839011_- | 0.29738452656053 | 0.0593725744569068 | 0.371265402923863 | -0.0509546331770201 | 4.12243031313693e-13 | 0.39645793030461 |
| DLPFC | ADediting_1159877 | chr5_115839014_- | 0.0969088612183215 | 0.094453919530828 | 0.472768184397332 | -0.0409269016859234 | 3.36017908772235e-15 | 0.427445119882579 |
| DLPFC | ADediting_1159878 | chr5_115839015_- | 0.718479359283381 | 0.0205554360151873 | 0.125614702299971 | -0.0871770061758733 | 2.53494036658028e-09 | 0.330250129392287 |
| DLPFC | ADediting_1159879 | chr5_115839023_- | 0.00123289822269311 | 0.182708369574991 | 0.452743413858217 | 0.0427987212886069 | 6.03772794217597e-12 | 0.377650523917643 |
| CER | ADediting_1159879 | chr5_115839023_- | 0.000238232304719346 | 0.295762354929898 | 6.40668887534325e-05 | 0.320411930320331 | 0.854501484295022 | 0.0150981961714423 |
| CER | ADediting_1159881 | chr5_115839040_- | 5.76611471149766e-05 | 0.322298785945653 | 0.00132545558861826 | 0.259786557629042 | 0.107405881017857 | 0.131981330323417 |
| CER | ADediting_1159883 | chr5_115839060_- | 1.56805524717099e-05 | 0.344654179356847 | 4.95372950045194e-05 | 0.324996996693916 | 0.290895865954395 | 0.0867982079524718 |
| CER | ADediting_1159884 | chr5_115839077_- | 0.00015213182626712 | 0.304426817349245 | 0.000196300858740864 | 0.299535748385023 | 0.332490865585159 | 0.0796680122081602 |
| CER | ADediting_1159885 | chr5_115839109_- | 8.65793157882584e-06 | 0.354307729386303 | 6.0536529848237e-05 | 0.321428710891267 | 0.342803671692528 | 0.0779905137299268 |
| DLPFC | ADediting_1159888 | chr5_115840394_- | 0.921301682079517 | -0.0056338477731612 | 0.0367065966356342 | -0.1187076618963 | 5.13931105036798e-09 | 0.324144490761842 |
| CER | ADediting_1159888 | chr5_115840394_- | 4.43396524844017e-05 | 0.326950577110923 | 4.02724842028792e-07 | 0.399734327059492 | 0.36999801450655 | 0.0737140540677838 |
| CER | ADediting_1159890 | chr5_115840406_- | 1.16507391269316e-05 | 0.349521852382371 | 4.53156736590725e-06 | 0.364482914371879 | 0.130320465337463 | 0.124082953504975 |
| DLPFC | ADediting_1159892 | chr5_115840426_- | 0.896651048297587 | 0.00740725142377308 | 0.065315309415121 | -0.104815607821798 | 7.32500802598683e-09 | 0.321031229744618 |
| CER | ADediting_1159892 | chr5_115840426_- | 0.000102593351597033 | 0.311821645836947 | 0.000118970955737987 | 0.309064562553183 | 0.607933770653448 | 0.0422228487722074 |
| CER | ADediting_1159893 | chr5_115840430_- | 0.000276271169630625 | 0.292839693273257 | 4.08745483875586e-05 | 0.328376268561507 | 0.830180602343879 | -0.0176577476378141 |
| DLPFC | ADediting_1159894 | chr5_115840435_- | 0.144994569805279 | -0.0829695035558925 | 0.000889600072074975 | -0.187826741917314 | 5.90077824609905e-10 | 0.342434444528622 |
| CER | ADediting_1159894 | chr5_115840435_- | 0.000125709224110297 | 0.308032039641228 | 1.05786726142299e-05 | 0.351086438416329 | 0.704203706034435 | 0.031252327192305 |
| CER | ADediting_1159895 | chr5_115840436_- | 1.26738587382612e-05 | 0.348150738230977 | 2.45999142563953e-06 | 0.373775995979954 | 0.716671921877951 | 0.0298747992781835 |
| DLPFC | ADediting_1159896 | chr5_115840466_- | 0.65822540550187 | 0.0252225150668478 | 0.110544380616287 | -0.0908120697891199 | 3.47513648060805e-11 | 0.364703091477002 |
| CER | ADediting_1159896 | chr5_115840466_- | 3.82862663962746e-06 | 0.367076030236605 | 2.47876115217129e-06 | 0.373662123165784 | 0.392613375403483 | 0.0703029780341696 |
| DLPFC | ADediting_1159901 | chr5_115840493_- | 0.27175189398458 | 0.0626127871511202 | 0.30569580646619 | -0.058362232732821 | 2.30579653807683e-10 | 0.350017683522514 |
| CER | ADediting_1159901 | chr5_115840493_- | 1.79443305949677e-05 | 0.342417408625049 | 8.55361604908909e-05 | 0.315170075821605 | 0.631693735776576 | 0.0394530946071702 |
| DLPFC | ADediting_1159902 | chr5_115840494_- | 0.778240641377738 | 0.0160583566233276 | 0.0872934937593975 | -0.0972755279718994 | 1.41226261476202e-08 | 0.315168346668729 |
| CER | ADediting_1159902 | chr5_115840494_- | 2.30996895529782e-06 | 0.37471701721329 | 2.54444186879945e-06 | 0.373269997707174 | 0.724196067055036 | 0.0290475226649441 |
| CER | ADediting_1159905 | chr5_115840524_- | 1.87838430159307e-05 | 0.341655110259499 | 0.00224627829303345 | 0.247660049904706 | 0.692554513577841 | -0.0325472386316399 |
| CER | ADediting_1159906 | chr5_115840548_- | 4.56050482128819e-05 | 0.326455908408508 | 0.000183567083886943 | 0.300831043144785 | 0.000780708071886626 | 0.271408739961141 |
| CER | ADediting_1159907 | chr5_115840554_- | 1.67421194800221e-07 | 0.411570412789493 | 1.53947966459222e-06 | 0.380715910036737 | 0.141927156725976 | 0.120485571139681 |
| CER | ADediting_1159909 | chr5_115840571_- | 8.05460664333433e-08 | 0.421099880423225 | 9.56731557051618e-06 | 0.352706388757402 | 0.0199631817725922 | 0.18985866224706 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.37319217851977e-71 | 0.803486661580734 | 2.83937109509806e-52 | 0.727257924951147 | 1.70327620682315e-06 | 0.267911102333608 |
| AC | 5.09115336011684e-91 | 0.89922974922277 | 1.52091066833648e-58 | 0.806544116275665 | 3.40700099725074e-15 | 0.470779937225674 |
| PCC | 3.20135729341228e-43 | 0.796823199793553 | 2.76836744441108e-41 | 0.78571037464894 | 0.00253905061077314 | 0.217233322512113 |
| CER | 1.09575951201443e-54 | 0.898176396696572 | 5.23184889350322e-32 | 0.780573451850874 | 0.00317788147088371 | 0.239356351889041 |
| TCX | 2.46974469217263e-44 | 0.856403984241325 | 5.84679063349522e-09 | 0.453031989005602 | 4.86042027808793e-07 | 0.397137971612246 |
| FP | 1.41123851701401e-31 | 0.735525704413447 | 1.10878844118755e-33 | 0.751987912290487 | 0.0297564880099522 | 0.162954623872582 |
| IFG | 7.13640817561952e-05 | 0.709519847475287 | 0.00250742848900551 | 0.577430235055745 | 0.86615901284788 | -0.0355155790353452 |
| PG | 2.73827497439201e-56 | 0.862379817183928 | 1.24830413007414e-31 | 0.725109210150853 | 0.954470929351058 | -0.00421467259364404 |
| STG | 4.99677739774374e-18 | 0.775128598806567 | 6.91466442590517e-16 | 0.741811073936952 | 0.629738907196001 | 0.0533628865405825 |
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Relation with AD stages for ATG12 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1159858 | chr5_115830653_- | 0.00114909379522154 | 0.308761080980656 |
| IFG | ADediting_1159903 | chr5_115840501_- | 0.0354713369979928 | 0.422303326441651 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 5.57231292749849e-05 | 0.377735015875191 |
| TCX | 0.000225649906814387 | 0.350947510910095 |
| IFG | 0.0225381962808968 | -0.454265833494718 |
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RelatedDrugs for ATG12 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ATG12 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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