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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for CNOT9 |
 Gene summary |
| Gene information | Gene symbol | CNOT9 | Gene ID | 9125 |
| Gene name | CCR4-NOT transcription complex subunit 9 | |
| Synonyms | CAF40|CT129|RCD-1|RCD1|RQCD1 | |
| Cytomap | 2q35 | |
| Type of gene | protein-coding | |
| Description | CCR4-NOT transcription complex subunit 9RCD1 required for cell differentiation1 homologcancer/testis antigen 129cell differentiation protein RCD1 homologcell differentiation protein RQCD1 homologprotein involved in sexual development | |
| Modification date | 20200313 | |
| UniProtAcc | Q92600, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| CNOT9 | GO:2000327 | positive regulation of nuclear receptor transcription coactivator activity | 18180299 |
Top |
RNA A-to-I events for CNOT9 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_847409(218571294, +), ADediting_847410(218571296, +), ADediting_847411(218571318, +), ADediting_847412(218571319, +), ADediting_847413(218571341, +), ADediting_847414(218571355, +), ADediting_847415(218571414, +), ADediting_847416(218571594, +), ADediting_847417(218571628, +), ADediting_847418(218571630, +), ADediting_847419(218571641, +), ADediting_847420(218571672, +), ADediting_847421(218571675, +), ADediting_847422(218571676, +), ADediting_847423(218571689, +), ADediting_847424(218571690, +), ADediting_847425(218571697, +), ADediting_847426(218571698, +), ADediting_847427(218571701, +), ADediting_847428(218571711, +), ADediting_847429(218571713, +), ADediting_847430(218571765, +), ADediting_847431(218571807, +), ADediting_847432(218571819, +), ADediting_847433(218571837, +), ADediting_847434(218571845, +), ADediting_847435(218571846, +), ADediting_847436(218571858, +), ADediting_847437(218572029, +), ADediting_847438(218572065, +), ADediting_847439(218572066, +), ADediting_847440(218572087, +), ADediting_847441(218572088, +), ADediting_847442(218572101, +), ADediting_847443(218572112, +), ADediting_847444(218572125, +), ADediting_847445(218572134, +), ADediting_847446(218572135, +), ADediting_847447(218572144, +), ADediting_847448(218572145, +), ADediting_847449(218572200, +), ADediting_847450(218572201, +), ADediting_847451(218572214, +), ADediting_847452(218572236, +), ADediting_847453(218572242, +), ADediting_847454(218572262, +), ADediting_847455(218572270, +), ADediting_847456(218572271, +), ADediting_847457(218572272, +), ADediting_847458(218572281, +), ADediting_847459(218572304, +), ADediting_847460(218572309, +), ADediting_847461(218572310, +), ADediting_847462(218572448, +), ADediting_847463(218572451, +), ADediting_847464(218572472, +), ADediting_847465(218572473, +), ADediting_847466(218572477, +), ADediting_847467(218572486, +), ADediting_847468(218572504, +), ADediting_847469(218572524, +), ADediting_847470(218572606, +), ADediting_847471(218573064, +), ADediting_847472(218573065, +), ADediting_847473(218573073, +), ADediting_847474(218573087, +), ADediting_847475(218573091, +), ADediting_847476(218573102, +), ADediting_847477(218573103, +), ADediting_847478(218573108, +), ADediting_847479(218573136, +), ADediting_847480(218573141, +), ADediting_847481(218573142, +), ADediting_847482(218573156, +), ADediting_847483(218573157, +), ADediting_847484(218573158, +), ADediting_847485(218573159, +), ADediting_847486(218573160, +), ADediting_847487(218573162, +), ADediting_847488(218573167, +), ADediting_847489(218573168, +), ADediting_847490(218573171, +), ADediting_847491(218573182, +), ADediting_847492(218573187, +), ADediting_847493(218573197, +), ADediting_847494(218573198, +), ADediting_847495(218573203, +), ADediting_847496(218573207, +), ADediting_847497(218573224, +), ADediting_847498(218573239, +), ADediting_847499(218573257, +), ADediting_847500(218573278, +), ADediting_847501(218573993, +), ADediting_847502(218574009, +), ADediting_847503(218574025, +), ADediting_847504(218574034, +), ADediting_847505(218574044, +), ADediting_847506(218574050, +), ADediting_847507(218574069, +), ADediting_847508(218574082, +), ADediting_847509(218574087, +), ADediting_847510(218574099, +), ADediting_847511(218574109, +), ADediting_847512(218574111, +), ADediting_847513(218574115, +), ADediting_847514(218574127, +), ADediting_847515(218574135, +), ADediting_847516(218574136, +), ADediting_847517(218574150, +), ADediting_847518(218574159, +), ADediting_847519(218574199, +), ADediting_847520(218574202, +), ADediting_847521(218574208, +), ADediting_847522(218574217, +), ADediting_847523(218574218, +), ADediting_847524(218574230, +), ADediting_847525(218575459, +), ADediting_847526(218575469, +), ADediting_847527(218575470, +), ADediting_847528(218575480, +), ADediting_847529(218575486, +), ADediting_847530(218575520, +), ADediting_847531(218575529, +), ADediting_847532(218575532, +), ADediting_847533(218575542, +), ADediting_847534(218575560, +), ADediting_847535(218575568, +), ADediting_847536(218575569, +), ADediting_847537(218575579, +), ADediting_847538(218575585, +), ADediting_847539(218575602, +), ADediting_847540(218575610, +), ADediting_847541(218575614, +), ADediting_847542(218575650, +), ADediting_847543(218575665, +), ADediting_847544(218575677, +), ADediting_847545(218576696, +), ADediting_847546(218576706, +), ADediting_847547(218576712, +), ADediting_847548(218576713, +), ADediting_847549(218576730, +), ADediting_847550(218576734, +), ADediting_847551(218576735, +), ADediting_847552(218576739, +), ADediting_847553(218576743, +), ADediting_847554(218576753, +), ADediting_847555(218576758, +), ADediting_847556(218576781, +), ADediting_847557(218576782, +), ADediting_847558(218576789, +), ADediting_847559(218576790, +), ADediting_847560(218576797, +), ADediting_847561(218576807, +), ADediting_847562(218576808, +), ADediting_847563(218576809, +), ADediting_847564(218576817, +), ADediting_847565(218576821, +), ADediting_847566(218576829, +), ADediting_847567(218576838, +), ADediting_847568(218576846, +), ADediting_847569(218576852, +), ADediting_847570(218576856, +), ADediting_847571(218576873, +), ADediting_847572(218576888, +), ADediting_847573(218576908, +), ADediting_847574(218576911, +), ADediting_847575(218576912, +), ADediting_847576(218576919, +), ADediting_847577(218576922, +), ADediting_847578(218579694, +), ADediting_847579(218579893, +), ADediting_847580(218581233, +), ADediting_847581(218581286, +), ADediting_847582(218581413, +), ADediting_847583(218581433, +), ADediting_847584(218581853, +), ADediting_847585(218581962, +), ADediting_847586(218581979, +), ADediting_847587(218581985, +), ADediting_847588(218582002, +), ADediting_847589(218582007, +), ADediting_847590(218582466, +), ADediting_847591(218582503, +), ADediting_847592(218582569, +), ADediting_847593(218582575, +), ADediting_847594(218582639, +), ADediting_847595(218582640, +), ADediting_847596(218591488, +), ADediting_847597(218591489, +), ADediting_847598(218591552, +), ADediting_847599(218591584, +), ADediting_847600(218591600, +), ADediting_847601(218591622, +), ADediting_847602(218591623, +), ADediting_847603(218591663, +), ADediting_1562323(218571331, +), ADediting_1562324(218574013, +), ADediting_1562325(218574125, +), ADediting_1562326(218574130, +), ADediting_1562327(218575592, +), ADediting_1562328(218575605, +), ADediting_1562329(218576772, +), ADediting_1562330(218581369, +), ADediting_1562331(218581381, +), ADediting_1562332(218581387, +), ADediting_1562333(218587176, +), ADediting_1635922(218572106, +), ADediting_1635923(218572111, +), ADediting_1635924(218572120, +), ADediting_1635925(218572174, +), ADediting_1635926(218572273, +), ADediting_1635927(218572527, +), ADediting_1635928(218573166, +), ADediting_1635929(218575406, +), ADediting_1635930(218576816, +), ADediting_1635931(218576818, +), ADediting_1635932(218580191, +), |
Top |
RNA editing positional annotations for CNOT9 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| ADediting_1562324 | chr2_218574013_+ | nonsynonymous SNV | ENST00000433439.1 | c.A43G | p.R15G | . | . | . |
| ADediting_847502 | chr2_218574009_+ | synonymous SNV | ENST00000433439.1 | c.A39G | p.L13L | . | . | . |
| ADediting_847503 | chr2_218574025_+ | nonsynonymous SNV | ENST00000433439.1 | c.A55G | p.S19G | . | . | . |
| ADediting_847504 | chr2_218574034_+ | nonsynonymous SNV | ENST00000433439.1 | c.A64G | p.I22V | . | . | . |
| ADediting_847505 | chr2_218574044_+ | nonsynonymous SNV | ENST00000433439.1 | c.A74G | p.H25R | . | . | . |
| ADediting_847506 | chr2_218574050_+ | nonsynonymous SNV | ENST00000433439.1 | c.A80G | p.N27S | . | . | . |
| ADediting_847507 | chr2_218574069_+ | synonymous SNV | ENST00000433439.1 | c.A99G | p.S33S | . | . | . |
| ADediting_847508 | chr2_218574082_+ | nonsynonymous SNV | ENST00000433439.1 | c.A112G | p.T38A | . | . | . |
| ADediting_847509 | chr2_218574087_+ | synonymous SNV | ENST00000433439.1 | c.A117G | p.S39S | . | . | . |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_847409 | chr2_218571294_+ | intronic |
| ADediting_847410 | chr2_218571296_+ | intronic |
| ADediting_847411 | chr2_218571318_+ | intronic |
| ADediting_847412 | chr2_218571319_+ | intronic |
| ADediting_847413 | chr2_218571341_+ | intronic |
| ADediting_847414 | chr2_218571355_+ | intronic |
| ADediting_847415 | chr2_218571414_+ | intronic |
| ADediting_847416 | chr2_218571594_+ | intronic |
| ADediting_847417 | chr2_218571628_+ | intronic |
| ADediting_847418 | chr2_218571630_+ | intronic |
| ADediting_847419 | chr2_218571641_+ | intronic |
| ADediting_847420 | chr2_218571672_+ | intronic |
| ADediting_847421 | chr2_218571675_+ | intronic |
| ADediting_847422 | chr2_218571676_+ | intronic |
| ADediting_847423 | chr2_218571689_+ | intronic |
| ADediting_847424 | chr2_218571690_+ | intronic |
| ADediting_847425 | chr2_218571697_+ | intronic |
| ADediting_847426 | chr2_218571698_+ | intronic |
| ADediting_847427 | chr2_218571701_+ | intronic |
| ADediting_847428 | chr2_218571711_+ | intronic |
| ADediting_847429 | chr2_218571713_+ | intronic |
| ADediting_847430 | chr2_218571765_+ | intronic |
| ADediting_847431 | chr2_218571807_+ | intronic |
| ADediting_847432 | chr2_218571819_+ | intronic |
| ADediting_847433 | chr2_218571837_+ | intronic |
| ADediting_847434 | chr2_218571845_+ | intronic |
| ADediting_847435 | chr2_218571846_+ | intronic |
| ADediting_847436 | chr2_218571858_+ | intronic |
| ADediting_847437 | chr2_218572029_+ | intronic |
| ADediting_847438 | chr2_218572065_+ | intronic |
| ADediting_847439 | chr2_218572066_+ | intronic |
| ADediting_847440 | chr2_218572087_+ | intronic |
| ADediting_847441 | chr2_218572088_+ | intronic |
| ADediting_847442 | chr2_218572101_+ | intronic |
| ADediting_847443 | chr2_218572112_+ | intronic |
| ADediting_847444 | chr2_218572125_+ | intronic |
| ADediting_847445 | chr2_218572134_+ | intronic |
| ADediting_847446 | chr2_218572135_+ | intronic |
| ADediting_847447 | chr2_218572144_+ | intronic |
| ADediting_847448 | chr2_218572145_+ | intronic |
| ADediting_847449 | chr2_218572200_+ | intronic |
| ADediting_847450 | chr2_218572201_+ | intronic |
| ADediting_847451 | chr2_218572214_+ | intronic |
| ADediting_847452 | chr2_218572236_+ | intronic |
| ADediting_847453 | chr2_218572242_+ | intronic |
| ADediting_847454 | chr2_218572262_+ | intronic |
| ADediting_847455 | chr2_218572270_+ | intronic |
| ADediting_847456 | chr2_218572271_+ | intronic |
| ADediting_847457 | chr2_218572272_+ | intronic |
| ADediting_847458 | chr2_218572281_+ | intronic |
| ADediting_847459 | chr2_218572304_+ | intronic |
| ADediting_847460 | chr2_218572309_+ | intronic |
| ADediting_847461 | chr2_218572310_+ | intronic |
| ADediting_847462 | chr2_218572448_+ | intronic |
| ADediting_847463 | chr2_218572451_+ | intronic |
| ADediting_847464 | chr2_218572472_+ | intronic |
| ADediting_847465 | chr2_218572473_+ | intronic |
| ADediting_847466 | chr2_218572477_+ | intronic |
| ADediting_847467 | chr2_218572486_+ | intronic |
| ADediting_847468 | chr2_218572504_+ | intronic |
| ADediting_847469 | chr2_218572524_+ | intronic |
| ADediting_847470 | chr2_218572606_+ | intronic |
| ADediting_847471 | chr2_218573064_+ | intronic |
| ADediting_847472 | chr2_218573065_+ | intronic |
| ADediting_847473 | chr2_218573073_+ | intronic |
| ADediting_847474 | chr2_218573087_+ | intronic |
| ADediting_847475 | chr2_218573091_+ | intronic |
| ADediting_847476 | chr2_218573102_+ | intronic |
| ADediting_847477 | chr2_218573103_+ | intronic |
| ADediting_847478 | chr2_218573108_+ | intronic |
| ADediting_847479 | chr2_218573136_+ | intronic |
| ADediting_847480 | chr2_218573141_+ | intronic |
| ADediting_847481 | chr2_218573142_+ | intronic |
| ADediting_847482 | chr2_218573156_+ | intronic |
| ADediting_847483 | chr2_218573157_+ | intronic |
| ADediting_847484 | chr2_218573158_+ | intronic |
| ADediting_847485 | chr2_218573159_+ | intronic |
| ADediting_847486 | chr2_218573160_+ | intronic |
| ADediting_847487 | chr2_218573162_+ | intronic |
| ADediting_847488 | chr2_218573167_+ | intronic |
| ADediting_847489 | chr2_218573168_+ | intronic |
| ADediting_847490 | chr2_218573171_+ | intronic |
| ADediting_847491 | chr2_218573182_+ | intronic |
| ADediting_847492 | chr2_218573187_+ | intronic |
| ADediting_847493 | chr2_218573197_+ | intronic |
| ADediting_847494 | chr2_218573198_+ | intronic |
| ADediting_847495 | chr2_218573203_+ | intronic |
| ADediting_847496 | chr2_218573207_+ | intronic |
| ADediting_847497 | chr2_218573224_+ | intronic |
| ADediting_847498 | chr2_218573239_+ | intronic |
| ADediting_847499 | chr2_218573257_+ | intronic |
| ADediting_847500 | chr2_218573278_+ | intronic |
| ADediting_847501 | chr2_218573993_+ | splicing |
| ADediting_847502 | chr2_218574009_+ | exonic |
| ADediting_847503 | chr2_218574025_+ | exonic |
| ADediting_847504 | chr2_218574034_+ | exonic |
| ADediting_847505 | chr2_218574044_+ | exonic |
| ADediting_847506 | chr2_218574050_+ | exonic |
| ADediting_847507 | chr2_218574069_+ | exonic |
| ADediting_847508 | chr2_218574082_+ | exonic |
| ADediting_847509 | chr2_218574087_+ | exonic |
| ADediting_847510 | chr2_218574099_+ | UTR3 |
| ADediting_847511 | chr2_218574109_+ | UTR3 |
| ADediting_847512 | chr2_218574111_+ | UTR3 |
| ADediting_847513 | chr2_218574115_+ | UTR3 |
| ADediting_847514 | chr2_218574127_+ | UTR3 |
| ADediting_847515 | chr2_218574135_+ | UTR3 |
| ADediting_847516 | chr2_218574136_+ | UTR3 |
| ADediting_847517 | chr2_218574150_+ | UTR3 |
| ADediting_847518 | chr2_218574159_+ | UTR3 |
| ADediting_847519 | chr2_218574199_+ | UTR3 |
| ADediting_847520 | chr2_218574202_+ | UTR3 |
| ADediting_847521 | chr2_218574208_+ | UTR3 |
| ADediting_847522 | chr2_218574217_+ | UTR3 |
| ADediting_847523 | chr2_218574218_+ | UTR3 |
| ADediting_847524 | chr2_218574230_+ | UTR3 |
| ADediting_847525 | chr2_218575459_+ | intronic |
| ADediting_847526 | chr2_218575469_+ | intronic |
| ADediting_847527 | chr2_218575470_+ | intronic |
| ADediting_847528 | chr2_218575480_+ | intronic |
| ADediting_847529 | chr2_218575486_+ | intronic |
| ADediting_847530 | chr2_218575520_+ | intronic |
| ADediting_847531 | chr2_218575529_+ | intronic |
| ADediting_847532 | chr2_218575532_+ | intronic |
| ADediting_847533 | chr2_218575542_+ | intronic |
| ADediting_847534 | chr2_218575560_+ | intronic |
| ADediting_847535 | chr2_218575568_+ | intronic |
| ADediting_847536 | chr2_218575569_+ | intronic |
| ADediting_847537 | chr2_218575579_+ | intronic |
| ADediting_847538 | chr2_218575585_+ | intronic |
| ADediting_847539 | chr2_218575602_+ | intronic |
| ADediting_847540 | chr2_218575610_+ | intronic |
| ADediting_847541 | chr2_218575614_+ | intronic |
| ADediting_847542 | chr2_218575650_+ | intronic |
| ADediting_847543 | chr2_218575665_+ | intronic |
| ADediting_847544 | chr2_218575677_+ | intronic |
| ADediting_847545 | chr2_218576696_+ | intronic |
| ADediting_847546 | chr2_218576706_+ | intronic |
| ADediting_847547 | chr2_218576712_+ | intronic |
| ADediting_847548 | chr2_218576713_+ | intronic |
| ADediting_847549 | chr2_218576730_+ | intronic |
| ADediting_847550 | chr2_218576734_+ | intronic |
| ADediting_847551 | chr2_218576735_+ | intronic |
| ADediting_847552 | chr2_218576739_+ | intronic |
| ADediting_847553 | chr2_218576743_+ | intronic |
| ADediting_847554 | chr2_218576753_+ | intronic |
| ADediting_847555 | chr2_218576758_+ | intronic |
| ADediting_847556 | chr2_218576781_+ | intronic |
| ADediting_847557 | chr2_218576782_+ | intronic |
| ADediting_847558 | chr2_218576789_+ | intronic |
| ADediting_847559 | chr2_218576790_+ | intronic |
| ADediting_847560 | chr2_218576797_+ | intronic |
| ADediting_847561 | chr2_218576807_+ | intronic |
| ADediting_847562 | chr2_218576808_+ | intronic |
| ADediting_847563 | chr2_218576809_+ | intronic |
| ADediting_847564 | chr2_218576817_+ | intronic |
| ADediting_847565 | chr2_218576821_+ | intronic |
| ADediting_847566 | chr2_218576829_+ | intronic |
| ADediting_847567 | chr2_218576838_+ | intronic |
| ADediting_847568 | chr2_218576846_+ | intronic |
| ADediting_847569 | chr2_218576852_+ | intronic |
| ADediting_847570 | chr2_218576856_+ | intronic |
| ADediting_847571 | chr2_218576873_+ | intronic |
| ADediting_847572 | chr2_218576888_+ | intronic |
| ADediting_847573 | chr2_218576908_+ | intronic |
| ADediting_847574 | chr2_218576911_+ | intronic |
| ADediting_847575 | chr2_218576912_+ | intronic |
| ADediting_847576 | chr2_218576919_+ | intronic |
| ADediting_847577 | chr2_218576922_+ | intronic |
| ADediting_847578 | chr2_218579694_+ | intronic |
| ADediting_847579 | chr2_218579893_+ | intronic |
| ADediting_847580 | chr2_218581233_+ | intronic |
| ADediting_847581 | chr2_218581286_+ | intronic |
| ADediting_847582 | chr2_218581413_+ | intronic |
| ADediting_847583 | chr2_218581433_+ | intronic |
| ADediting_847584 | chr2_218581853_+ | intronic |
| ADediting_847585 | chr2_218581962_+ | intronic |
| ADediting_847586 | chr2_218581979_+ | intronic |
| ADediting_847587 | chr2_218581985_+ | intronic |
| ADediting_847588 | chr2_218582002_+ | intronic |
| ADediting_847589 | chr2_218582007_+ | intronic |
| ADediting_847590 | chr2_218582466_+ | intronic |
| ADediting_847591 | chr2_218582503_+ | intronic |
| ADediting_847592 | chr2_218582569_+ | intronic |
| ADediting_847593 | chr2_218582575_+ | intronic |
| ADediting_847594 | chr2_218582639_+ | intronic |
| ADediting_847595 | chr2_218582640_+ | intronic |
| ADediting_847596 | chr2_218591488_+ | intronic |
| ADediting_847597 | chr2_218591489_+ | intronic |
| ADediting_847598 | chr2_218591552_+ | intronic |
| ADediting_847599 | chr2_218591584_+ | intronic |
| ADediting_847600 | chr2_218591600_+ | intronic |
| ADediting_847601 | chr2_218591622_+ | intronic |
| ADediting_847602 | chr2_218591623_+ | intronic |
| ADediting_847603 | chr2_218591663_+ | intronic |
| ADediting_1562323 | chr2_218571331_+ | intronic |
| ADediting_1562324 | chr2_218574013_+ | exonic |
| ADediting_1562325 | chr2_218574125_+ | UTR3 |
| ADediting_1562326 | chr2_218574130_+ | UTR3 |
| ADediting_1562327 | chr2_218575592_+ | intronic |
| ADediting_1562328 | chr2_218575605_+ | intronic |
| ADediting_1562329 | chr2_218576772_+ | intronic |
| ADediting_1562330 | chr2_218581369_+ | intronic |
| ADediting_1562331 | chr2_218581381_+ | intronic |
| ADediting_1562332 | chr2_218581387_+ | intronic |
| ADediting_1562333 | chr2_218587176_+ | intronic |
| ADediting_1635922 | chr2_218572106_+ | intronic |
| ADediting_1635923 | chr2_218572111_+ | intronic |
| ADediting_1635924 | chr2_218572120_+ | intronic |
| ADediting_1635925 | chr2_218572174_+ | intronic |
| ADediting_1635926 | chr2_218572273_+ | intronic |
| ADediting_1635927 | chr2_218572527_+ | intronic |
| ADediting_1635928 | chr2_218573166_+ | intronic |
| ADediting_1635929 | chr2_218575406_+ | intronic |
| ADediting_1635930 | chr2_218576816_+ | intronic |
| ADediting_1635931 | chr2_218576818_+ | intronic |
| ADediting_1635932 | chr2_218580191_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_847409 | chr2_218571294_+ | SINE | Alu | Name=FAM |
| ADediting_847410 | chr2_218571296_+ | SINE | Alu | Name=FAM |
| ADediting_847411 | chr2_218571318_+ | SINE | Alu | Name=FAM |
| ADediting_847412 | chr2_218571319_+ | SINE | Alu | Name=FAM |
| ADediting_847413 | chr2_218571341_+ | SINE | Alu | Name=FAM |
| ADediting_847414 | chr2_218571355_+ | SINE | Alu | Name=FAM |
| ADediting_847415 | chr2_218571414_+ | SINE | Alu | Name=FAM |
| ADediting_847416 | chr2_218571594_+ | SINE | Alu | Name=AluSp |
| ADediting_847417 | chr2_218571628_+ | SINE | Alu | Name=AluSp |
| ADediting_847418 | chr2_218571630_+ | SINE | Alu | Name=AluSp |
| ADediting_847419 | chr2_218571641_+ | SINE | Alu | Name=AluSp |
| ADediting_847420 | chr2_218571672_+ | SINE | Alu | Name=AluSp |
| ADediting_847421 | chr2_218571675_+ | SINE | Alu | Name=AluSp |
| ADediting_847422 | chr2_218571676_+ | SINE | Alu | Name=AluSp |
| ADediting_847423 | chr2_218571689_+ | SINE | Alu | Name=AluSp |
| ADediting_847424 | chr2_218571690_+ | SINE | Alu | Name=AluSp |
| ADediting_847425 | chr2_218571697_+ | SINE | Alu | Name=AluSp |
| ADediting_847426 | chr2_218571698_+ | SINE | Alu | Name=AluSp |
| ADediting_847427 | chr2_218571701_+ | SINE | Alu | Name=AluSp |
| ADediting_847428 | chr2_218571711_+ | SINE | Alu | Name=AluSp |
| ADediting_847429 | chr2_218571713_+ | SINE | Alu | Name=AluSp |
| ADediting_847430 | chr2_218571765_+ | SINE | Alu | Name=AluSp |
| ADediting_847431 | chr2_218571807_+ | SINE | Alu | Name=AluSp |
| ADediting_847432 | chr2_218571819_+ | SINE | Alu | Name=AluSp |
| ADediting_847433 | chr2_218571837_+ | SINE | Alu | Name=AluSp |
| ADediting_847434 | chr2_218571845_+ | SINE | Alu | Name=AluSp |
| ADediting_847435 | chr2_218571846_+ | SINE | Alu | Name=AluSp |
| ADediting_847436 | chr2_218571858_+ | SINE | Alu | Name=AluSp |
| ADediting_847438 | chr2_218572065_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847439 | chr2_218572066_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847440 | chr2_218572087_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847441 | chr2_218572088_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847442 | chr2_218572101_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847443 | chr2_218572112_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847444 | chr2_218572125_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847445 | chr2_218572134_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847446 | chr2_218572135_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847447 | chr2_218572144_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847448 | chr2_218572145_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847449 | chr2_218572200_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847450 | chr2_218572201_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847451 | chr2_218572214_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847452 | chr2_218572236_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847453 | chr2_218572242_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847454 | chr2_218572262_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847455 | chr2_218572270_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847456 | chr2_218572271_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847457 | chr2_218572272_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847458 | chr2_218572281_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847459 | chr2_218572304_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847460 | chr2_218572309_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847461 | chr2_218572310_+ | SINE | Alu | Name=AluSq10 |
| ADediting_847462 | chr2_218572448_+ | SINE | Alu | Name=AluJb |
| ADediting_847463 | chr2_218572451_+ | SINE | Alu | Name=AluJb |
| ADediting_847464 | chr2_218572472_+ | SINE | Alu | Name=AluJb |
| ADediting_847465 | chr2_218572473_+ | SINE | Alu | Name=AluJb |
| ADediting_847466 | chr2_218572477_+ | SINE | Alu | Name=AluJb |
| ADediting_847467 | chr2_218572486_+ | SINE | Alu | Name=AluJb |
| ADediting_847468 | chr2_218572504_+ | SINE | Alu | Name=AluJb |
| ADediting_847469 | chr2_218572524_+ | SINE | Alu | Name=AluJb |
| ADediting_847470 | chr2_218572606_+ | SINE | Alu | Name=AluJb |
| ADediting_847471 | chr2_218573064_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847472 | chr2_218573065_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847473 | chr2_218573073_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847474 | chr2_218573087_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847475 | chr2_218573091_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847476 | chr2_218573102_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847477 | chr2_218573103_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847478 | chr2_218573108_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847479 | chr2_218573136_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847480 | chr2_218573141_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847481 | chr2_218573142_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847482 | chr2_218573156_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847483 | chr2_218573157_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847484 | chr2_218573158_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847485 | chr2_218573159_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847486 | chr2_218573160_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847487 | chr2_218573162_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847488 | chr2_218573167_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847489 | chr2_218573168_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847490 | chr2_218573171_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847491 | chr2_218573182_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847492 | chr2_218573187_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847493 | chr2_218573197_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847494 | chr2_218573198_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847495 | chr2_218573203_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847496 | chr2_218573207_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847497 | chr2_218573224_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847498 | chr2_218573239_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847499 | chr2_218573257_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847500 | chr2_218573278_+ | SINE | Alu | Name=AluSq2 |
| ADediting_847501 | chr2_218573993_+ | SINE | Alu | Name=AluSz |
| ADediting_847502 | chr2_218574009_+ | SINE | Alu | Name=AluSz |
| ADediting_847503 | chr2_218574025_+ | SINE | Alu | Name=AluSz |
| ADediting_847504 | chr2_218574034_+ | SINE | Alu | Name=AluSz |
| ADediting_847505 | chr2_218574044_+ | SINE | Alu | Name=AluSz |
| ADediting_847506 | chr2_218574050_+ | SINE | Alu | Name=AluSz |
| ADediting_847507 | chr2_218574069_+ | SINE | Alu | Name=AluSz |
| ADediting_847508 | chr2_218574082_+ | SINE | Alu | Name=AluSz |
| ADediting_847509 | chr2_218574087_+ | SINE | Alu | Name=AluSz |
| ADediting_847510 | chr2_218574099_+ | SINE | Alu | Name=AluSz |
| ADediting_847511 | chr2_218574109_+ | SINE | Alu | Name=AluSz |
| ADediting_847512 | chr2_218574111_+ | SINE | Alu | Name=AluSz |
| ADediting_847513 | chr2_218574115_+ | SINE | Alu | Name=AluSz |
| ADediting_847514 | chr2_218574127_+ | SINE | Alu | Name=AluSz |
| ADediting_847515 | chr2_218574135_+ | SINE | Alu | Name=AluSz |
| ADediting_847516 | chr2_218574136_+ | SINE | Alu | Name=AluSz |
| ADediting_847517 | chr2_218574150_+ | SINE | Alu | Name=AluSz |
| ADediting_847518 | chr2_218574159_+ | SINE | Alu | Name=AluSz |
| ADediting_847519 | chr2_218574199_+ | SINE | Alu | Name=AluSz |
| ADediting_847520 | chr2_218574202_+ | SINE | Alu | Name=AluSz |
| ADediting_847521 | chr2_218574208_+ | SINE | Alu | Name=AluSz |
| ADediting_847522 | chr2_218574217_+ | SINE | Alu | Name=AluSz |
| ADediting_847523 | chr2_218574218_+ | SINE | Alu | Name=AluSz |
| ADediting_847524 | chr2_218574230_+ | SINE | Alu | Name=AluSz |
| ADediting_847525 | chr2_218575459_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847526 | chr2_218575469_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847527 | chr2_218575470_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847528 | chr2_218575480_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847529 | chr2_218575486_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847530 | chr2_218575520_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847531 | chr2_218575529_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847532 | chr2_218575532_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847533 | chr2_218575542_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847534 | chr2_218575560_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847535 | chr2_218575568_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847536 | chr2_218575569_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847537 | chr2_218575579_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847538 | chr2_218575585_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847539 | chr2_218575602_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847540 | chr2_218575610_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847541 | chr2_218575614_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847542 | chr2_218575650_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847543 | chr2_218575665_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847544 | chr2_218575677_+ | SINE | Alu | Name=AluYb9 |
| ADediting_847545 | chr2_218576696_+ | SINE | Alu | Name=AluSz |
| ADediting_847546 | chr2_218576706_+ | SINE | Alu | Name=AluSz |
| ADediting_847547 | chr2_218576712_+ | SINE | Alu | Name=AluSz |
| ADediting_847548 | chr2_218576713_+ | SINE | Alu | Name=AluSz |
| ADediting_847549 | chr2_218576730_+ | SINE | Alu | Name=AluSz |
| ADediting_847550 | chr2_218576734_+ | SINE | Alu | Name=AluSz |
| ADediting_847551 | chr2_218576735_+ | SINE | Alu | Name=AluSz |
| ADediting_847552 | chr2_218576739_+ | SINE | Alu | Name=AluSz |
| ADediting_847553 | chr2_218576743_+ | SINE | Alu | Name=AluSz |
| ADediting_847554 | chr2_218576753_+ | SINE | Alu | Name=AluSz |
| ADediting_847555 | chr2_218576758_+ | SINE | Alu | Name=AluSz |
| ADediting_847556 | chr2_218576781_+ | SINE | Alu | Name=AluSz |
| ADediting_847557 | chr2_218576782_+ | SINE | Alu | Name=AluSz |
| ADediting_847558 | chr2_218576789_+ | SINE | Alu | Name=AluSz |
| ADediting_847559 | chr2_218576790_+ | SINE | Alu | Name=AluSz |
| ADediting_847560 | chr2_218576797_+ | SINE | Alu | Name=AluSz |
| ADediting_847561 | chr2_218576807_+ | SINE | Alu | Name=AluSz |
| ADediting_847562 | chr2_218576808_+ | SINE | Alu | Name=AluSz |
| ADediting_847563 | chr2_218576809_+ | SINE | Alu | Name=AluSz |
| ADediting_847564 | chr2_218576817_+ | SINE | Alu | Name=AluSz |
| ADediting_847565 | chr2_218576821_+ | SINE | Alu | Name=AluSz |
| ADediting_847566 | chr2_218576829_+ | SINE | Alu | Name=AluSz |
| ADediting_847567 | chr2_218576838_+ | SINE | Alu | Name=AluSz |
| ADediting_847568 | chr2_218576846_+ | SINE | Alu | Name=AluSz |
| ADediting_847569 | chr2_218576852_+ | SINE | Alu | Name=AluSz |
| ADediting_847570 | chr2_218576856_+ | SINE | Alu | Name=AluSz |
| ADediting_847571 | chr2_218576873_+ | SINE | Alu | Name=AluSz |
| ADediting_847572 | chr2_218576888_+ | SINE | Alu | Name=AluSz |
| ADediting_847573 | chr2_218576908_+ | SINE | Alu | Name=AluSz |
| ADediting_847574 | chr2_218576911_+ | SINE | Alu | Name=AluSz |
| ADediting_847575 | chr2_218576912_+ | SINE | Alu | Name=AluSz |
| ADediting_847576 | chr2_218576919_+ | SINE | Alu | Name=AluSz |
| ADediting_847577 | chr2_218576922_+ | SINE | Alu | Name=AluSz |
| ADediting_847578 | chr2_218579694_+ | SINE | Alu | Name=AluY |
| ADediting_847579 | chr2_218579893_+ | SINE | Alu | Name=AluSz6 |
| ADediting_847580 | chr2_218581233_+ | SINE | Alu | Name=AluSx3 |
| ADediting_847581 | chr2_218581286_+ | SINE | Alu | Name=AluSx3 |
| ADediting_847582 | chr2_218581413_+ | SINE | Alu | Name=AluSx3 |
| ADediting_847583 | chr2_218581433_+ | SINE | Alu | Name=AluSx3 |
| ADediting_847584 | chr2_218581853_+ | SINE | Alu | Name=AluJb |
| ADediting_847585 | chr2_218581962_+ | SINE | Alu | Name=AluJb |
| ADediting_847586 | chr2_218581979_+ | SINE | Alu | Name=AluJb |
| ADediting_847587 | chr2_218581985_+ | SINE | Alu | Name=AluJb |
| ADediting_847588 | chr2_218582002_+ | SINE | Alu | Name=AluJb |
| ADediting_847589 | chr2_218582007_+ | SINE | Alu | Name=AluJb |
| ADediting_847590 | chr2_218582466_+ | SINE | Alu | Name=AluY |
| ADediting_847591 | chr2_218582503_+ | SINE | Alu | Name=AluY |
| ADediting_847592 | chr2_218582569_+ | SINE | Alu | Name=AluY |
| ADediting_847593 | chr2_218582575_+ | SINE | Alu | Name=AluY |
| ADediting_847594 | chr2_218582639_+ | SINE | Alu | Name=AluY |
| ADediting_847595 | chr2_218582640_+ | SINE | Alu | Name=AluY |
| ADediting_847596 | chr2_218591488_+ | SINE | Alu | Name=AluSg4 |
| ADediting_847597 | chr2_218591489_+ | SINE | Alu | Name=AluSg4 |
| ADediting_847598 | chr2_218591552_+ | SINE | Alu | Name=AluSg4 |
| ADediting_847599 | chr2_218591584_+ | SINE | Alu | Name=AluSg4 |
| ADediting_847600 | chr2_218591600_+ | SINE | Alu | Name=AluSg4 |
| ADediting_847601 | chr2_218591622_+ | SINE | Alu | Name=AluSg4 |
| ADediting_847602 | chr2_218591623_+ | SINE | Alu | Name=AluSg4 |
| ADediting_847603 | chr2_218591663_+ | SINE | Alu | Name=AluSg4 |
| ADediting_1562323 | chr2_218571331_+ | SINE | Alu | Name=FAM |
| ADediting_1562324 | chr2_218574013_+ | SINE | Alu | Name=AluSz |
| ADediting_1562325 | chr2_218574125_+ | SINE | Alu | Name=AluSz |
| ADediting_1562326 | chr2_218574130_+ | SINE | Alu | Name=AluSz |
| ADediting_1562327 | chr2_218575592_+ | SINE | Alu | Name=AluYb9 |
| ADediting_1562328 | chr2_218575605_+ | SINE | Alu | Name=AluYb9 |
| ADediting_1562329 | chr2_218576772_+ | SINE | Alu | Name=AluSz |
| ADediting_1562330 | chr2_218581369_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1562331 | chr2_218581381_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1562332 | chr2_218581387_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1562333 | chr2_218587176_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1635922 | chr2_218572106_+ | SINE | Alu | Name=AluSq10 |
| ADediting_1635923 | chr2_218572111_+ | SINE | Alu | Name=AluSq10 |
| ADediting_1635924 | chr2_218572120_+ | SINE | Alu | Name=AluSq10 |
| ADediting_1635925 | chr2_218572174_+ | SINE | Alu | Name=AluSq10 |
| ADediting_1635926 | chr2_218572273_+ | SINE | Alu | Name=AluSq10 |
| ADediting_1635927 | chr2_218572527_+ | SINE | Alu | Name=AluJb |
| ADediting_1635928 | chr2_218573166_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1635929 | chr2_218575406_+ | SINE | Alu | Name=AluYb9 |
| ADediting_1635930 | chr2_218576816_+ | SINE | Alu | Name=AluSz |
| ADediting_1635931 | chr2_218576818_+ | SINE | Alu | Name=AluSz |
| ADediting_1635932 | chr2_218580191_+ | SINE | Alu | Name=AluSx1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for CNOT9 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| ES | ADediting_847501 | chr2_218573993_+ | 218573975:218573997 | 3ss | 2i | ATTTTATGTTTTTGAGACAGGAT | 3.35 | ATTTTATGTTTTTGAGACGGGAT | -4.60 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for CNOT9 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for CNOT9 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for CNOT9 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1562324 | chr2_218574013_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-3940-3p | chr2 | 218574011 | 218574017 | 7mer-m8 | 218573997 | 218574018 | 147 | -21.34 |
| ADediting_1562325 | chr2_218574125_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-4466 | chr2 | 218574123 | 218574130 | 8mer-1a | 218574112 | 218574130 | 143 | -19.8 |
| ADediting_1562325 | chr2_218574125_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-675-5p | chr2 | 218574123 | 218574130 | 8mer-1a | 218574108 | 218574130 | 142 | -21.73 |
| ADediting_1562326 | chr2_218574130_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-3940-3p | chr2 | 218574128 | 218574135 | 8mer-1a | 218574114 | 218574135 | 140 | -15.4 |
| ADediting_1562326 | chr2_218574130_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-4783-3p | chr2 | 218574126 | 218574132 | 7mer-m8 | 218574111 | 218574133 | 156 | -28.72 |
| ADediting_847502 | chr2_218574009_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-196a-3p | chr2 | 218574005 | 218574011 | 7mer-m8 | 218573791 | 218574012 | 151 | -19.44 |
| ADediting_847502 | chr2_218574009_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-3065-5p | chr2 | 218574003 | 218574009 | 7mer-m8 | 218573791 | 218574010 | 154 | -13.95 |
| ADediting_847502 | chr2_218574009_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-3187-5p | chr2 | 218574008 | 218574014 | 7mer-m8 | 218573993 | 218574015 | 147 | -27.89 |
| ADediting_847502 | chr2_218574009_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-5189-5p | chr2 | 218574008 | 218574014 | 7mer-m8 | 218573790 | 218574015 | 154 | -25.85 |
| ADediting_847502 | chr2_218574009_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-612 | chr2 | 218574008 | 218574014 | 7mer-m8 | 218573992 | 218574015 | 153 | -25.89 |
| ADediting_847502 | chr2_218574009_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-6860 | chr2 | 218574008 | 218574014 | 7mer-m8 | 218573995 | 218574015 | 146 | -22.73 |
| ADediting_847505 | chr2_218574044_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-4285 | chr2 | 218574041 | 218574047 | 7mer-m8 | 218574031 | 218574048 | 148 | -24.23 |
| ADediting_847506 | chr2_218574050_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-485-5p | chr2 | 218574048 | 218574054 | 7mer-m8 | 218574035 | 218574055 | 153 | -17.59 |
| ADediting_847506 | chr2_218574050_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-604 | chr2 | 218574046 | 218574052 | 7mer-m8 | 218574034 | 218574053 | 152 | -25.85 |
| ADediting_847506 | chr2_218574050_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-6884-5p | chr2 | 218574048 | 218574054 | 7mer-m8 | 218574037 | 218574055 | 145 | -22.44 |
| ADediting_847507 | chr2_218574069_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-1307-5p | chr2 | 218574068 | 218574074 | 7mer-1a | 218574054 | 218574074 | 147 | -27.41 |
| ADediting_847508 | chr2_218574082_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-6746-5p | chr2 | 218574076 | 218574082 | 7mer-m8 | 218574062 | 218574083 | 148 | -20.92 |
| ADediting_847508 | chr2_218574082_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-6765-5p | chr2 | 218574081 | 218574087 | 7mer-m8 | 218574065 | 218574088 | 152 | -25.93 |
| ADediting_847510 | chr2_218574099_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-4691-3p | chr2 | 218574097 | 218574103 | 7mer-m8 | 218574078 | 218574104 | 152 | -28.97 |
| ADediting_847515 | chr2_218574135_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-34a-3p | chr2 | 218574132 | 218574138 | 7mer-m8 | 218574117 | 218574139 | 143 | -8.92 |
| ADediting_847516 | chr2_218574136_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-548ae-3p | chr2 | 218574135 | 218574141 | 7mer-m8 | 218574122 | 218574142 | 141 | -10.65 |
| ADediting_847516 | chr2_218574136_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-548ah-3p | chr2 | 218574135 | 218574141 | 7mer-m8 | 218574121 | 218574142 | 141 | -11.25 |
| ADediting_847516 | chr2_218574136_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-548aj-3p | chr2 | 218574135 | 218574141 | 7mer-m8 | 218574122 | 218574142 | 141 | -8.54 |
| ADediting_847516 | chr2_218574136_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-548am-3p | chr2 | 218574135 | 218574141 | 7mer-m8 | 218574121 | 218574142 | 141 | -10.65 |
| ADediting_847516 | chr2_218574136_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-548aq-3p | chr2 | 218574135 | 218574141 | 7mer-m8 | 218574121 | 218574142 | 141 | -10.68 |
| ADediting_847516 | chr2_218574136_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-548j-3p | chr2 | 218574135 | 218574141 | 7mer-m8 | 218574121 | 218574142 | 143 | -10.93 |
| ADediting_847516 | chr2_218574136_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-548x-3p | chr2 | 218574135 | 218574141 | 7mer-m8 | 218574123 | 218574142 | 141 | -8.54 |
| ADediting_847516 | chr2_218574136_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-7844-5p | chr2 | 218574133 | 218574139 | 7mer-m8 | 218574119 | 218574140 | 169 | -28 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1562324 | chr2_218574013_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-661 | chr2 | 218574010 | 218574016 | 7mer-m8 | 218573994 | 218574017 | 145 | -20.85 |
| ADediting_1562324 | chr2_218574013_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-6742-3p | chr2 | 218574009 | 218574015 | 7mer-m8 | 218573997 | 218574016 | 140 | -13.62 |
| ADediting_1562324 | chr2_218574013_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-6861-5p | chr2 | 218574008 | 218574014 | 7mer-m8 | 218573995 | 218574015 | 146 | -19.6 |
| ADediting_1562326 | chr2_218574130_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-7978 | chr2 | 218574125 | 218574131 | 7mer-m8 | 218574110 | 218574132 | 149 | -20.67 |
| ADediting_847502 | chr2_218574009_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-6861-5p | chr2 | 218574008 | 218574014 | 7mer-m8 | 218573995 | 218574015 | 146 | -19.6 |
| ADediting_847503 | chr2_218574025_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-324-3p | chr2 | 218574023 | 218574029 | 7mer-m8 | 218574008 | 218574030 | 148 | -24.11 |
| ADediting_847503 | chr2_218574025_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-4793-3p | chr2 | 218574020 | 218574026 | 7mer-m8 | 218574005 | 218574027 | 153 | -20.45 |
| ADediting_847505 | chr2_218574044_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-6807-5p | chr2 | 218574038 | 218574044 | 7mer-m8 | 218574024 | 218574045 | 141 | -16.23 |
| ADediting_847506 | chr2_218574050_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-377-5p | chr2 | 218574048 | 218574054 | 7mer-m8 | 218574034 | 218574055 | 155 | -19.65 |
| ADediting_847506 | chr2_218574050_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-6086 | chr2 | 218574048 | 218574054 | 7mer-m8 | 218574036 | 218574055 | 152 | -19.82 |
| ADediting_847508 | chr2_218574082_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-1233-5p | chr2 | 218574077 | 218574083 | 7mer-m8 | 218574059 | 218574084 | 143 | -20.36 |
| ADediting_847508 | chr2_218574082_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-30c-1-3p | chr2 | 218574076 | 218574082 | 7mer-m8 | 218574060 | 218574083 | 145 | -20.53 |
| ADediting_847508 | chr2_218574082_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-30c-2-3p | chr2 | 218574076 | 218574082 | 7mer-m8 | 218574060 | 218574083 | 153 | -22.72 |
| ADediting_847508 | chr2_218574082_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-6778-5p | chr2 | 218574077 | 218574083 | 7mer-m8 | 218574059 | 218574084 | 151 | -21.77 |
| ADediting_847508 | chr2_218574082_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-6788-5p | chr2 | 218574076 | 218574082 | 7mer-m8 | 218574064 | 218574083 | 153 | -18.96 |
| ADediting_847509 | chr2_218574087_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-4478 | chr2 | 218574085 | 218574091 | 7mer-m8 | 218574076 | 218574092 | 155 | -27.56 |
| ADediting_847509 | chr2_218574087_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-485-5p | chr2 | 218574086 | 218574092 | 7mer-m8 | 218574072 | 218574093 | 153 | -21.28 |
| ADediting_847509 | chr2_218574087_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-6884-5p | chr2 | 218574086 | 218574092 | 7mer-m8 | 218574073 | 218574093 | 155 | -22.96 |
| ADediting_847509 | chr2_218574087_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-7160-5p | chr2 | 218574083 | 218574089 | 7mer-m8 | 218574070 | 218574090 | 150 | -18.77 |
| ADediting_847509 | chr2_218574087_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-7162-3p | chr2 | 218574082 | 218574088 | 7mer-m8 | 218574071 | 218574089 | 155 | -18.02 |
| ADediting_847510 | chr2_218574099_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-5690 | chr2 | 218574097 | 218574103 | 7mer-m8 | 218574084 | 218574104 | 145 | -16.75 |
| ADediting_847513 | chr2_218574115_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-1282 | chr2 | 218574113 | 218574120 | 8mer-1a | 218574101 | 218574120 | 152 | -17.94 |
| ADediting_847514 | chr2_218574127_+ | ENSG00000144580.13 | ENST00000489687.1 | CNOT9-207 | hsa-miR-7978 | chr2 | 218574125 | 218574131 | 7mer-m8 | 218574110 | 218574132 | 149 | -20.67 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1391023 | chr8_140732605_- | ENSG00000144580.13 | ENST00000273064.10 | CNOT9-201 | hsa-miR-151a-3p | chr2 | 218595262 | 218595268 | 7mer-m8 | 218595251 | 218595269 | 152 | -18.7 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000144580.13 | ENST00000542068.5 | CNOT9-208 | hsa-miR-151a-3p | chr2 | 218595262 | 218595268 | 7mer-m8 | 218595251 | 218595269 | 152 | -18.7 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000144580.13 | ENST00000273064.10 | CNOT9-201 | hsa-miR-4477b | chr2 | 218596805 | 218596811 | 7mer-m8 | 218596791 | 218596812 | 147 | -9.78 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000144580.13 | ENST00000273064.10 | CNOT9-201 | hsa-miR-641 | chr2 | 218594713 | 218594719 | 7mer-m8 | 218594698 | 218594720 | 157 | -21.54 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000144580.13 | ENST00000418808.1 | CNOT9-203 | hsa-miR-641 | chr2 | 218594713 | 218594719 | 7mer-m8 | 218594698 | 218594720 | 157 | -21.54 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000144580.13 | ENST00000542068.5 | CNOT9-208 | hsa-miR-641 | chr2 | 218594713 | 218594719 | 7mer-m8 | 218594698 | 218594720 | 157 | -21.54 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000144580.13 | ENST00000273064.10 | CNOT9-201 | hsa-miR-337-3p | chr2 | 218595889 | 218595896 | 8mer-1a | 218595874 | 218595896 | 153 | -13.8 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000144580.13 | ENST00000542068.5 | CNOT9-208 | hsa-miR-337-3p | chr2 | 218595889 | 218595896 | 8mer-1a | 218595874 | 218595896 | 153 | -13.8 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000144580.13 | ENST00000273064.10 | CNOT9-201 | hsa-miR-641 | chr2 | 218595124 | 218595131 | 8mer-1a | 218595107 | 218595131 | 145 | -11.19 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000144580.13 | ENST00000542068.5 | CNOT9-208 | hsa-miR-641 | chr2 | 218595124 | 218595131 | 8mer-1a | 218595107 | 218595131 | 145 | -11.19 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000144580.13 | ENST00000273064.10 | CNOT9-201 | hsa-miR-641 | chr2 | 218595124 | 218595131 | 8mer-1a | 218595107 | 218595131 | 145 | -11.19 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000144580.13 | ENST00000542068.5 | CNOT9-208 | hsa-miR-641 | chr2 | 218595124 | 218595131 | 8mer-1a | 218595107 | 218595131 | 145 | -11.19 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000144580.13 | ENST00000273064.10 | CNOT9-201 | hsa-miR-5585-3p | chr2 | 218596034 | 218596040 | 7mer-m8 | 218596020 | 218596041 | 140 | -12.75 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000144580.13 | ENST00000542068.5 | CNOT9-208 | hsa-miR-5585-3p | chr2 | 218596034 | 218596040 | 7mer-m8 | 218596020 | 218596041 | 140 | -12.75 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000144580.13 | ENST00000273064.10 | CNOT9-201 | hsa-miR-5585-3p | chr2 | 218596034 | 218596040 | 7mer-m8 | 218596020 | 218596041 | 140 | -12.75 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000144580.13 | ENST00000542068.5 | CNOT9-208 | hsa-miR-5585-3p | chr2 | 218596034 | 218596040 | 7mer-m8 | 218596020 | 218596041 | 140 | -12.75 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for CNOT9 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000489687.1 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_847501 | ENST00000489687.1 | chr2_218573993_+ | 122 | -81.10 | -81.80 | -114.10 |
| ADediting_847502 | ENST00000489687.1 | chr2_218574009_+ | 138 | -85.80 | -81.80 | -114.10 |
| ADediting_1562324 | ENST00000489687.1 | chr2_218574013_+ | 142 | -81.10 | -81.80 | -114.10 |
| ADediting_847503 | ENST00000489687.1 | chr2_218574025_+ | 154 | -82.20 | -81.80 | -114.10 |
| ADediting_847504 | ENST00000489687.1 | chr2_218574034_+ | 163 | -82.10 | -81.80 | -114.10 |
| ADediting_847505 | ENST00000489687.1 | chr2_218574044_+ | 173 | -87.20 | -81.80 | -114.10 |
| ADediting_847506 | ENST00000489687.1 | chr2_218574050_+ | 179 | -85.30 | -81.80 | -114.10 |
| ADediting_847507 | ENST00000489687.1 | chr2_218574069_+ | 198 | -83.70 | -81.80 | -114.10 |
| ADediting_847508 | ENST00000489687.1 | chr2_218574082_+ | 211 | -81.80 | -81.80 | -114.10 |
| ADediting_847509 | ENST00000489687.1 | chr2_218574087_+ | 216 | -81.10 | -81.80 | -114.10 |
| ADediting_847510 | ENST00000489687.1 | chr2_218574099_+ | 228 | -86.10 | -81.80 | -114.10 |
| ADediting_847511 | ENST00000489687.1 | chr2_218574109_+ | 238 | -82.50 | -81.80 | -114.10 |
| ADediting_847512 | ENST00000489687.1 | chr2_218574111_+ | 240 | -85.40 | -81.80 | -114.10 |
| ADediting_847513 | ENST00000489687.1 | chr2_218574115_+ | 244 | -85.70 | -81.80 | -114.10 |
| ADediting_1562325 | ENST00000489687.1 | chr2_218574125_+ | 254 | -83.20 | -81.80 | -114.10 |
| ADediting_847514 | ENST00000489687.1 | chr2_218574127_+ | 256 | -82.70 | -81.80 | -114.10 |
| ADediting_1562326 | ENST00000489687.1 | chr2_218574130_+ | 259 | -81.10 | -81.80 | -114.10 |
| ADediting_847515 | ENST00000489687.1 | chr2_218574135_+ | 264 | -81.90 | -81.80 | -114.10 |
| ADediting_847516 | ENST00000489687.1 | chr2_218574136_+ | 265 | -83.30 | -81.80 | -114.10 |
| ADediting_847517 | ENST00000489687.1 | chr2_218574150_+ | 279 | -83.30 | -81.80 | -114.10 |
| ADediting_847518 | ENST00000489687.1 | chr2_218574159_+ | 288 | -81.80 | -81.80 | -114.10 |
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Relation with ADAR for CNOT9 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_847411 | chr2_218571318_+ | 1.5333582723266e-05 | 0.345023672736903 | 0.0113235340617385 | 0.206278799679272 | 0.466184964506572 | 0.0599460767120409 |
| DLPFC | ADediting_847435 | chr2_218571846_+ | 0.0613845769311487 | 0.106377555018901 | 0.533613288524741 | -0.0354878353892815 | 1.60845550780573e-15 | 0.431921975869763 |
| DLPFC | ADediting_847436 | chr2_218571858_+ | 0.0211992320058449 | 0.130847511874986 | 0.642319786707536 | -0.0264817834780041 | 1.85422651031547e-14 | 0.416803046185718 |
| DLPFC | ADediting_847440 | chr2_218572087_+ | 0.876719477761399 | -0.0088463099650148 | 0.0489704288429922 | -0.11192367343015 | 8.31950096518835e-12 | 0.37532168137121 |
| DLPFC | ADediting_847455 | chr2_218572270_+ | 0.204261620485037 | 0.0723006216206091 | 0.266581997190247 | -0.0632911592976078 | 2.22873179748626e-21 | 0.504034500321278 |
| CER | ADediting_847466 | chr2_218572477_+ | 4.20001637728963e-06 | 0.365654555330054 | 0.00801635777396797 | 0.215733635319835 | 0.248546897727738 | 0.0947950754621197 |
| CER | ADediting_847470 | chr2_218572606_+ | 1.78546988060148e-05 | 0.34250077371118 | 0.0669809330013806 | 0.149973531802216 | 0.684590686255234 | -0.0334370824396079 |
| STG | ADediting_847502 | chr2_218574009_+ | 0.000327141254687386 | 0.38270591040343 | 0.229243349025496 | 0.132589410254873 | 0.0280840344818896 | 0.239702022486593 |
| CER | ADediting_847507 | chr2_218574069_+ | 7.15272121260843e-05 | 0.318425518290755 | 0.00658025234087202 | 0.220971480032527 | 0.673005375949828 | -0.0347385528794752 |
| TCX | ADediting_847507 | chr2_218574069_+ | 7.09914688723075e-05 | 0.318561542300465 | 0.26998486036304 | 0.0906402373284702 | 0.00501388195528091 | 0.228001911124418 |
| CER | ADediting_847508 | chr2_218574082_+ | 4.72040772680315e-05 | 0.325848923416526 | 0.00414803505997005 | 0.232786348549606 | 0.707341334127449 | -0.0309048702687237 |
| STG | ADediting_847508 | chr2_218574082_+ | 0.00447630217963343 | 0.307206592531086 | 0.118719315645852 | 0.171534559188508 | 0.0625002874174065 | 0.20415332110428 |
| CER | ADediting_847509 | chr2_218574087_+ | 2.62047218220947e-07 | 0.405586237495702 | 0.000179627105035684 | 0.301248787987216 | 0.602395509408401 | 0.0428752061927894 |
| STG | ADediting_847509 | chr2_218574087_+ | 0.00216478846349948 | 0.330111239742225 | 0.148106963955307 | 0.159175914758312 | 0.172034091481877 | 0.150414264790111 |
| DLPFC | ADediting_847510 | chr2_218574099_+ | 0.0213657224402167 | 0.130680960150243 | 0.698707417796797 | 0.0220703469104935 | 2.34146265435427e-09 | 0.330927666503034 |
| CER | ADediting_847511 | chr2_218574109_+ | 0.000166942362063155 | 0.302654179350245 | 0.00557613910190764 | 0.225277705825015 | 0.876368085275724 | -0.0128092746524132 |
| TCX | ADediting_847511 | chr2_218574109_+ | 0.302363733309868 | 0.0847690865821255 | 0.18125641122053 | -0.10974519784845 | 3.19020572931752e-05 | 0.332675527253502 |
| DLPFC | ADediting_847513 | chr2_218574115_+ | 0.583992234886227 | 0.0312180012325232 | 0.272291065720924 | -0.0625425479887857 | 1.14000088504659e-08 | 0.31709491291358 |
| DLPFC | ADediting_847514 | chr2_218574127_+ | 0.3571578686136 | 0.0524735398310172 | 0.32680886926708 | -0.0558743698312331 | 7.52343390298828e-20 | 0.48680211359882 |
| CER | ADediting_847514 | chr2_218574127_+ | 0.000260863751406796 | 0.293975559502899 | 0.000158219347229147 | 0.303679556890559 | 0.926420628022133 | -0.00760377801027877 |
| DLPFC | ADediting_847517 | chr2_218574150_+ | 0.251900798264637 | 0.0652681868832855 | 0.601933336527164 | -0.0297397428832319 | 2.95011500169726e-09 | 0.328951143241966 |
| CER | ADediting_847517 | chr2_218574150_+ | 0.000140255507710675 | 0.305968545064788 | 0.00602413139607643 | 0.223277546261895 | 0.759005114771112 | -0.0252563800202556 |
| CER | ADediting_847521 | chr2_218574208_+ | 2.46468345503306e-08 | 0.435925081779511 | 1.54931357575875e-05 | 0.344852792862684 | 0.11207443948817 | 0.13027252354031 |
| CER | ADediting_847522 | chr2_218574217_+ | 4.7226434034768e-05 | 0.32584057445863 | 0.00645118409190595 | 0.221490765775944 | 0.414745760854731 | -0.0670771509123427 |
| CER | ADediting_847523 | chr2_218574218_+ | 5.50688333350589e-08 | 0.425938262753595 | 6.08266349902674e-05 | 0.321343089590489 | 0.276145255763407 | 0.0894881534052104 |
| DLPFC | ADediting_847525 | chr2_218575459_+ | 0.0484480469044982 | 0.11218172260917 | 0.377256742998553 | -0.0503203823210715 | 1.09893760619379e-20 | 0.496342330436124 |
| DLPFC | ADediting_847526 | chr2_218575469_+ | 0.178194011531627 | 0.0766639008831757 | 0.132061416118855 | -0.0857251071132546 | 3.48391198083278e-18 | 0.466842394463018 |
| DLPFC | ADediting_847527 | chr2_218575470_+ | 0.363896466578313 | 0.0517434506379071 | 0.0344241998924121 | -0.120177547027669 | 3.19526254160333e-17 | 0.454685022453993 |
| DLPFC | ADediting_847528 | chr2_218575480_+ | 0.150955279392004 | 0.0817623873297117 | 0.164695387371256 | -0.0791114192540529 | 1.46638003142818e-15 | 0.432479289317396 |
| DLPFC | ADediting_847544 | chr2_218575677_+ | 0.0110235846042867 | 0.144200289522037 | 0.264525739497449 | 0.0635634744658414 | 2.18834693351886e-08 | 0.311185401003153 |
| DLPFC | ADediting_847568 | chr2_218576846_+ | 0.330668964834054 | 0.0554309087872172 | 0.297448651178366 | -0.0593647080347918 | 1.69765446091549e-09 | 0.333654742868754 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.44502793881729e-87 | 0.849025322881296 | 1.02497626613479e-68 | 0.794590042695829 | 1.65495128168434e-10 | 0.3526465163916 |
| AC | 2.42672021715117e-103 | 0.920721001158655 | 3.66523905016186e-67 | 0.837917316105676 | 7.30234067840265e-15 | 0.465724600128695 |
| PCC | 8.98073883445909e-45 | 0.805255665136808 | 2.77321927711453e-42 | 0.791527885395932 | 0.000227970308324927 | 0.263691456040788 |
| CER | 6.42813802208823e-53 | 0.892079689868037 | 1.38040377997857e-25 | 0.723437942248683 | 0.0444317365015848 | 0.164372423377534 |
| TCX | 4.23207235962113e-45 | 0.860053769144943 | 7.89009513682906e-11 | 0.499226589315194 | 2.84754714011917e-07 | 0.404463254167315 |
| FP | 3.16371736522558e-41 | 0.801917642519631 | 1.28541933897269e-27 | 0.700833442340839 | 2.96671288608609e-05 | 0.307551266489955 |
| IFG | 2.06013148263921e-07 | 0.835227968753181 | 1.58063740195714e-05 | 0.750059600098104 | 0.130298203471355 | 0.310946288369392 |
| PG | 1.26490575023918e-56 | 0.863618928745024 | 2.05309498435286e-32 | 0.731405424601595 | 0.403350382299923 | 0.0616302146463813 |
| STG | 2.91428270891906e-23 | 0.837821677314912 | 1.95314848449809e-08 | 0.566438692397992 | 0.00180878749344208 | 0.335516995815712 |
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Relation with AD stages for CNOT9 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| TCX | 6.11565184387621e-05 | 0.379174767324918 |
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RelatedDrugs for CNOT9 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CNOT9 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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