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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for ST3GAL5 |
 Gene summary |
| Gene information | Gene symbol | ST3GAL5 | Gene ID | 8869 |
| Gene name | ST3 beta-galactoside alpha-2,3-sialyltransferase 5 | |
| Synonyms | SATI|SIAT9|SIATGM3S|SPDRS|ST3Gal V|ST3GalV | |
| Cytomap | 2p11.2 | |
| Type of gene | protein-coding | |
| Description | lactosylceramide alpha-2,3-sialyltransferaseCMP-NeuAc:lactosylceramide alpha-2,3-sialyltransferaseST3 beta-galactoside alpha-23-sialyltransferase 5alpha 2,3-sialyltransferase Vganglioside GM3 synthasesialyltransferase 9 (CMP-NeuAc:lactosylceramide al | |
| Modification date | 20200320 | |
| UniProtAcc | Q9UNP4, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for ST3GAL5 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_904693(85840689, -), ADediting_904694(85840716, -), ADediting_904695(85840741, -), ADediting_904696(85840759, -), ADediting_904697(85840761, -), ADediting_904698(85840772, -), ADediting_904699(85840822, -), ADediting_904700(85840832, -), ADediting_904701(85840861, -), ADediting_904702(85840911, -), ADediting_904703(85840918, -), ADediting_904704(85841454, -), ADediting_904705(85841458, -), ADediting_904706(85841462, -), ADediting_904707(85841472, -), ADediting_904708(85841490, -), ADediting_904709(85841507, -), ADediting_904710(85841523, -), ADediting_904711(85841528, -), ADediting_904712(85841530, -), ADediting_904713(85841536, -), ADediting_904714(85841585, -), ADediting_904715(85841586, -), ADediting_904716(85841590, -), ADediting_904717(85841599, -), ADediting_904718(85841601, -), ADediting_904719(85841602, -), ADediting_904720(85841607, -), ADediting_904721(85841608, -), ADediting_904722(85842898, -), ADediting_904723(85842899, -), ADediting_904724(85842959, -), ADediting_904725(85849119, -), ADediting_904726(85849181, -), ADediting_904727(85849328, -), ADediting_904728(85849426, -), ADediting_904729(85849447, -), ADediting_904730(85849465, -), ADediting_904731(85849515, -), ADediting_904732(85849571, -), ADediting_904733(85849613, -), ADediting_904734(85850982, -), ADediting_904735(85850983, -), ADediting_904736(85850993, -), ADediting_904737(85851006, -), ADediting_904738(85851013, -), ADediting_904739(85851022, -), ADediting_904740(85851028, -), ADediting_904741(85851041, -), ADediting_904742(85851045, -), ADediting_904743(85851049, -), ADediting_904744(85851054, -), ADediting_904745(85851055, -), ADediting_904746(85851090, -), ADediting_904747(85851110, -), ADediting_904748(85851187, -), ADediting_904749(85851190, -), ADediting_904750(85856632, -), ADediting_904751(85856635, -), ADediting_904752(85856636, -), ADediting_904753(85856638, -), ADediting_904754(85856642, -), ADediting_904755(85856646, -), ADediting_904756(85856648, -), ADediting_904757(85856659, -), ADediting_904758(85856662, -), ADediting_904759(85856672, -), ADediting_904760(85856678, -), ADediting_904761(85856681, -), ADediting_904762(85856685, -), ADediting_904763(85856686, -), ADediting_904764(85856693, -), ADediting_904765(85856698, -), ADediting_904766(85856748, -), ADediting_904767(85856749, -), ADediting_904768(85856765, -), ADediting_904769(85856783, -), ADediting_904770(85856802, -), ADediting_904771(85856843, -), ADediting_904772(85856844, -), ADediting_904773(85856846, -), ADediting_904774(85856963, -), ADediting_904775(85856975, -), ADediting_904776(85856985, -), ADediting_904777(85857032, -), ADediting_904778(85857037, -), ADediting_904779(85857145, -), ADediting_904780(85857150, -), ADediting_904781(85857158, -), ADediting_904782(85857159, -), ADediting_904783(85857162, -), ADediting_904784(85857169, -), ADediting_904785(85857183, -), ADediting_904786(85857195, -), ADediting_904787(85857286, -), ADediting_904788(85857345, -), ADediting_904789(85857437, -), ADediting_904790(85858338, -), ADediting_904791(85858379, -), ADediting_904792(85858448, -), ADediting_904793(85858449, -), ADediting_904794(85858504, -), ADediting_904795(85858527, -), ADediting_904796(85858581, -), ADediting_904797(85858582, -), ADediting_904798(85860662, -), ADediting_904799(85860690, -), ADediting_904800(85860751, -), ADediting_904801(85867073, -), ADediting_904802(85867086, -), ADediting_904803(85870744, -), ADediting_904804(85870745, -), ADediting_904805(85870787, -), ADediting_904806(85870814, -), ADediting_904807(85870815, -), ADediting_904808(85870821, -), ADediting_904809(85870841, -), ADediting_904810(85870850, -), ADediting_904811(85875138, -), ADediting_904812(85875152, -), ADediting_904813(85875168, -), ADediting_904814(85875198, -), ADediting_904815(85875247, -), ADediting_904816(85876531, -), ADediting_904817(85876571, -), ADediting_904818(85876591, -), ADediting_904819(85876595, -), ADediting_904820(85876600, -), ADediting_904821(85876603, -), ADediting_904822(85876656, -), ADediting_904823(85876663, -), ADediting_904824(85876666, -), ADediting_904825(85876676, -), ADediting_904826(85876705, -), ADediting_904827(85882582, -), ADediting_904828(85886218, -), ADediting_904829(85886313, -), ADediting_1564687(85851081, -), ADediting_1564688(85856708, -), ADediting_1564689(85856838, -), ADediting_1564690(85856976, -), ADediting_1564691(85857002, -), ADediting_1564692(85857049, -), ADediting_1564693(85857176, -), ADediting_1564694(85858538, -), ADediting_1639552(85841538, -), ADediting_1639553(85849493, -), |
Top |
RNA editing positional annotations for ST3GAL5 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_904693 | chr2_85840689_- | intronic |
| ADediting_904694 | chr2_85840716_- | intronic |
| ADediting_904695 | chr2_85840741_- | intronic |
| ADediting_904696 | chr2_85840759_- | intronic |
| ADediting_904697 | chr2_85840761_- | intronic |
| ADediting_904698 | chr2_85840772_- | intronic |
| ADediting_904699 | chr2_85840822_- | intronic |
| ADediting_904700 | chr2_85840832_- | intronic |
| ADediting_904701 | chr2_85840861_- | intronic |
| ADediting_904702 | chr2_85840911_- | intronic |
| ADediting_904703 | chr2_85840918_- | intronic |
| ADediting_904704 | chr2_85841454_- | intronic |
| ADediting_904705 | chr2_85841458_- | intronic |
| ADediting_904706 | chr2_85841462_- | intronic |
| ADediting_904707 | chr2_85841472_- | intronic |
| ADediting_904708 | chr2_85841490_- | intronic |
| ADediting_904709 | chr2_85841507_- | intronic |
| ADediting_904710 | chr2_85841523_- | intronic |
| ADediting_904711 | chr2_85841528_- | intronic |
| ADediting_904712 | chr2_85841530_- | intronic |
| ADediting_904713 | chr2_85841536_- | intronic |
| ADediting_904714 | chr2_85841585_- | intronic |
| ADediting_904715 | chr2_85841586_- | intronic |
| ADediting_904716 | chr2_85841590_- | intronic |
| ADediting_904717 | chr2_85841599_- | intronic |
| ADediting_904718 | chr2_85841601_- | intronic |
| ADediting_904719 | chr2_85841602_- | intronic |
| ADediting_904720 | chr2_85841607_- | intronic |
| ADediting_904721 | chr2_85841608_- | intronic |
| ADediting_904722 | chr2_85842898_- | intronic |
| ADediting_904723 | chr2_85842899_- | intronic |
| ADediting_904724 | chr2_85842959_- | intronic |
| ADediting_904725 | chr2_85849119_- | UTR3 |
| ADediting_904726 | chr2_85849181_- | UTR3 |
| ADediting_904727 | chr2_85849328_- | UTR3 |
| ADediting_904728 | chr2_85849426_- | UTR3 |
| ADediting_904729 | chr2_85849447_- | UTR3 |
| ADediting_904730 | chr2_85849465_- | UTR3 |
| ADediting_904731 | chr2_85849515_- | UTR3 |
| ADediting_904732 | chr2_85849571_- | UTR3 |
| ADediting_904733 | chr2_85849613_- | UTR3 |
| ADediting_904734 | chr2_85850982_- | intronic |
| ADediting_904735 | chr2_85850983_- | intronic |
| ADediting_904736 | chr2_85850993_- | intronic |
| ADediting_904737 | chr2_85851006_- | intronic |
| ADediting_904738 | chr2_85851013_- | intronic |
| ADediting_904739 | chr2_85851022_- | intronic |
| ADediting_904740 | chr2_85851028_- | intronic |
| ADediting_904741 | chr2_85851041_- | intronic |
| ADediting_904742 | chr2_85851045_- | intronic |
| ADediting_904743 | chr2_85851049_- | intronic |
| ADediting_904744 | chr2_85851054_- | intronic |
| ADediting_904745 | chr2_85851055_- | intronic |
| ADediting_904746 | chr2_85851090_- | intronic |
| ADediting_904747 | chr2_85851110_- | intronic |
| ADediting_904748 | chr2_85851187_- | intronic |
| ADediting_904749 | chr2_85851190_- | intronic |
| ADediting_904750 | chr2_85856632_- | intronic |
| ADediting_904751 | chr2_85856635_- | intronic |
| ADediting_904752 | chr2_85856636_- | intronic |
| ADediting_904753 | chr2_85856638_- | intronic |
| ADediting_904754 | chr2_85856642_- | intronic |
| ADediting_904755 | chr2_85856646_- | intronic |
| ADediting_904756 | chr2_85856648_- | intronic |
| ADediting_904757 | chr2_85856659_- | intronic |
| ADediting_904758 | chr2_85856662_- | intronic |
| ADediting_904759 | chr2_85856672_- | intronic |
| ADediting_904760 | chr2_85856678_- | intronic |
| ADediting_904761 | chr2_85856681_- | intronic |
| ADediting_904762 | chr2_85856685_- | intronic |
| ADediting_904763 | chr2_85856686_- | intronic |
| ADediting_904764 | chr2_85856693_- | intronic |
| ADediting_904765 | chr2_85856698_- | intronic |
| ADediting_904766 | chr2_85856748_- | intronic |
| ADediting_904767 | chr2_85856749_- | intronic |
| ADediting_904768 | chr2_85856765_- | intronic |
| ADediting_904769 | chr2_85856783_- | intronic |
| ADediting_904770 | chr2_85856802_- | intronic |
| ADediting_904771 | chr2_85856843_- | intronic |
| ADediting_904772 | chr2_85856844_- | intronic |
| ADediting_904773 | chr2_85856846_- | intronic |
| ADediting_904774 | chr2_85856963_- | intronic |
| ADediting_904775 | chr2_85856975_- | intronic |
| ADediting_904776 | chr2_85856985_- | intronic |
| ADediting_904777 | chr2_85857032_- | intronic |
| ADediting_904778 | chr2_85857037_- | intronic |
| ADediting_904779 | chr2_85857145_- | intronic |
| ADediting_904780 | chr2_85857150_- | intronic |
| ADediting_904781 | chr2_85857158_- | intronic |
| ADediting_904782 | chr2_85857159_- | intronic |
| ADediting_904783 | chr2_85857162_- | intronic |
| ADediting_904784 | chr2_85857169_- | intronic |
| ADediting_904785 | chr2_85857183_- | intronic |
| ADediting_904786 | chr2_85857195_- | intronic |
| ADediting_904787 | chr2_85857286_- | intronic |
| ADediting_904788 | chr2_85857345_- | intronic |
| ADediting_904789 | chr2_85857437_- | intronic |
| ADediting_904790 | chr2_85858338_- | intronic |
| ADediting_904791 | chr2_85858379_- | intronic |
| ADediting_904792 | chr2_85858448_- | intronic |
| ADediting_904793 | chr2_85858449_- | intronic |
| ADediting_904794 | chr2_85858504_- | intronic |
| ADediting_904795 | chr2_85858527_- | intronic |
| ADediting_904796 | chr2_85858581_- | intronic |
| ADediting_904797 | chr2_85858582_- | intronic |
| ADediting_904798 | chr2_85860662_- | intronic |
| ADediting_904799 | chr2_85860690_- | intronic |
| ADediting_904800 | chr2_85860751_- | intronic |
| ADediting_904801 | chr2_85867073_- | intronic |
| ADediting_904802 | chr2_85867086_- | intronic |
| ADediting_904803 | chr2_85870744_- | intronic |
| ADediting_904804 | chr2_85870745_- | intronic |
| ADediting_904805 | chr2_85870787_- | intronic |
| ADediting_904806 | chr2_85870814_- | intronic |
| ADediting_904807 | chr2_85870815_- | intronic |
| ADediting_904808 | chr2_85870821_- | intronic |
| ADediting_904809 | chr2_85870841_- | intronic |
| ADediting_904810 | chr2_85870850_- | intronic |
| ADediting_904811 | chr2_85875138_- | intronic |
| ADediting_904812 | chr2_85875152_- | intronic |
| ADediting_904813 | chr2_85875168_- | intronic |
| ADediting_904814 | chr2_85875198_- | intronic |
| ADediting_904815 | chr2_85875247_- | intronic |
| ADediting_904816 | chr2_85876531_- | intronic |
| ADediting_904817 | chr2_85876571_- | intronic |
| ADediting_904818 | chr2_85876591_- | intronic |
| ADediting_904819 | chr2_85876595_- | intronic |
| ADediting_904820 | chr2_85876600_- | intronic |
| ADediting_904821 | chr2_85876603_- | intronic |
| ADediting_904822 | chr2_85876656_- | intronic |
| ADediting_904823 | chr2_85876663_- | intronic |
| ADediting_904824 | chr2_85876666_- | intronic |
| ADediting_904825 | chr2_85876676_- | intronic |
| ADediting_904826 | chr2_85876705_- | intronic |
| ADediting_904827 | chr2_85882582_- | intronic |
| ADediting_904828 | chr2_85886218_- | intronic |
| ADediting_904829 | chr2_85886313_- | intronic |
| ADediting_1564687 | chr2_85851081_- | intronic |
| ADediting_1564688 | chr2_85856708_- | intronic |
| ADediting_1564689 | chr2_85856838_- | intronic |
| ADediting_1564690 | chr2_85856976_- | intronic |
| ADediting_1564691 | chr2_85857002_- | intronic |
| ADediting_1564692 | chr2_85857049_- | intronic |
| ADediting_1564693 | chr2_85857176_- | intronic |
| ADediting_1564694 | chr2_85858538_- | intronic |
| ADediting_1639552 | chr2_85841538_- | intronic |
| ADediting_1639553 | chr2_85849493_- | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_904693 | chr2_85840689_- | SINE | Alu | Name=AluSx4 |
| ADediting_904694 | chr2_85840716_- | SINE | Alu | Name=AluSx4 |
| ADediting_904695 | chr2_85840741_- | SINE | Alu | Name=AluSx4 |
| ADediting_904696 | chr2_85840759_- | SINE | Alu | Name=AluSx4 |
| ADediting_904697 | chr2_85840761_- | SINE | Alu | Name=AluSx4 |
| ADediting_904698 | chr2_85840772_- | SINE | Alu | Name=AluSx4 |
| ADediting_904699 | chr2_85840822_- | SINE | Alu | Name=AluSx4 |
| ADediting_904700 | chr2_85840832_- | SINE | Alu | Name=AluSx4 |
| ADediting_904701 | chr2_85840861_- | SINE | Alu | Name=AluSx4 |
| ADediting_904702 | chr2_85840911_- | SINE | Alu | Name=AluSx4 |
| ADediting_904703 | chr2_85840918_- | SINE | Alu | Name=AluSx4 |
| ADediting_904704 | chr2_85841454_- | SINE | Alu | Name=AluJb |
| ADediting_904705 | chr2_85841458_- | SINE | Alu | Name=AluJb |
| ADediting_904706 | chr2_85841462_- | SINE | Alu | Name=AluJb |
| ADediting_904707 | chr2_85841472_- | SINE | Alu | Name=AluJb |
| ADediting_904708 | chr2_85841490_- | SINE | Alu | Name=AluJb |
| ADediting_904709 | chr2_85841507_- | SINE | Alu | Name=AluJb |
| ADediting_904710 | chr2_85841523_- | SINE | Alu | Name=AluJb |
| ADediting_904711 | chr2_85841528_- | SINE | Alu | Name=AluJb |
| ADediting_904712 | chr2_85841530_- | SINE | Alu | Name=AluJb |
| ADediting_904713 | chr2_85841536_- | SINE | Alu | Name=AluJb |
| ADediting_904714 | chr2_85841585_- | SINE | Alu | Name=AluJb |
| ADediting_904715 | chr2_85841586_- | SINE | Alu | Name=AluJb |
| ADediting_904716 | chr2_85841590_- | SINE | Alu | Name=AluJb |
| ADediting_904717 | chr2_85841599_- | SINE | Alu | Name=AluJb |
| ADediting_904718 | chr2_85841601_- | SINE | Alu | Name=AluJb |
| ADediting_904719 | chr2_85841602_- | SINE | Alu | Name=AluJb |
| ADediting_904720 | chr2_85841607_- | SINE | Alu | Name=AluJb |
| ADediting_904721 | chr2_85841608_- | SINE | Alu | Name=AluJb |
| ADediting_904722 | chr2_85842898_- | SINE | Alu | Name=AluSp |
| ADediting_904723 | chr2_85842899_- | SINE | Alu | Name=AluSp |
| ADediting_904724 | chr2_85842959_- | SINE | Alu | Name=AluSp |
| ADediting_904725 | chr2_85849119_- | SINE | Alu | Name=AluJb |
| ADediting_904726 | chr2_85849181_- | SINE | Alu | Name=AluJb |
| ADediting_904727 | chr2_85849328_- | SINE | Alu | Name=AluJb |
| ADediting_904728 | chr2_85849426_- | SINE | Alu | Name=AluY |
| ADediting_904729 | chr2_85849447_- | SINE | Alu | Name=AluY |
| ADediting_904730 | chr2_85849465_- | SINE | Alu | Name=AluY |
| ADediting_904731 | chr2_85849515_- | SINE | Alu | Name=AluY |
| ADediting_904732 | chr2_85849571_- | SINE | Alu | Name=AluY |
| ADediting_904733 | chr2_85849613_- | SINE | Alu | Name=AluY |
| ADediting_904734 | chr2_85850982_- | SINE | Alu | Name=AluSg |
| ADediting_904735 | chr2_85850983_- | SINE | Alu | Name=AluSg |
| ADediting_904736 | chr2_85850993_- | SINE | Alu | Name=AluSg |
| ADediting_904737 | chr2_85851006_- | SINE | Alu | Name=AluSg |
| ADediting_904738 | chr2_85851013_- | SINE | Alu | Name=AluSg |
| ADediting_904739 | chr2_85851022_- | SINE | Alu | Name=AluSg |
| ADediting_904740 | chr2_85851028_- | SINE | Alu | Name=AluSg |
| ADediting_904741 | chr2_85851041_- | SINE | Alu | Name=AluSg |
| ADediting_904742 | chr2_85851045_- | SINE | Alu | Name=AluSg |
| ADediting_904743 | chr2_85851049_- | SINE | Alu | Name=AluSg |
| ADediting_904744 | chr2_85851054_- | SINE | Alu | Name=AluSg |
| ADediting_904745 | chr2_85851055_- | SINE | Alu | Name=AluSg |
| ADediting_904746 | chr2_85851090_- | SINE | Alu | Name=AluSg |
| ADediting_904747 | chr2_85851110_- | SINE | Alu | Name=AluSg |
| ADediting_904748 | chr2_85851187_- | SINE | Alu | Name=AluSg |
| ADediting_904749 | chr2_85851190_- | SINE | Alu | Name=AluSg |
| ADediting_904750 | chr2_85856632_- | SINE | Alu | Name=AluJr4 |
| ADediting_904751 | chr2_85856635_- | SINE | Alu | Name=AluJr4 |
| ADediting_904752 | chr2_85856636_- | SINE | Alu | Name=AluJr4 |
| ADediting_904753 | chr2_85856638_- | SINE | Alu | Name=AluJr4 |
| ADediting_904754 | chr2_85856642_- | SINE | Alu | Name=AluJr4 |
| ADediting_904755 | chr2_85856646_- | SINE | Alu | Name=AluJr4 |
| ADediting_904756 | chr2_85856648_- | SINE | Alu | Name=AluJr4 |
| ADediting_904757 | chr2_85856659_- | SINE | Alu | Name=AluJr4 |
| ADediting_904758 | chr2_85856662_- | SINE | Alu | Name=AluJr4 |
| ADediting_904759 | chr2_85856672_- | SINE | Alu | Name=AluJr4 |
| ADediting_904760 | chr2_85856678_- | SINE | Alu | Name=AluJr4 |
| ADediting_904761 | chr2_85856681_- | SINE | Alu | Name=AluJr4 |
| ADediting_904762 | chr2_85856685_- | SINE | Alu | Name=AluJr4 |
| ADediting_904763 | chr2_85856686_- | SINE | Alu | Name=AluJr4 |
| ADediting_904764 | chr2_85856693_- | SINE | Alu | Name=AluJr4 |
| ADediting_904765 | chr2_85856698_- | SINE | Alu | Name=AluJr4 |
| ADediting_904766 | chr2_85856748_- | SINE | Alu | Name=AluJr4 |
| ADediting_904767 | chr2_85856749_- | SINE | Alu | Name=AluJr4 |
| ADediting_904768 | chr2_85856765_- | SINE | Alu | Name=AluJr4 |
| ADediting_904769 | chr2_85856783_- | SINE | Alu | Name=AluJr4 |
| ADediting_904770 | chr2_85856802_- | SINE | Alu | Name=AluJr4 |
| ADediting_904771 | chr2_85856843_- | SINE | Alu | Name=AluJr4 |
| ADediting_904772 | chr2_85856844_- | SINE | Alu | Name=AluJr4 |
| ADediting_904773 | chr2_85856846_- | SINE | Alu | Name=AluJr4 |
| ADediting_904774 | chr2_85856963_- | SINE | Alu | Name=AluJb |
| ADediting_904775 | chr2_85856975_- | SINE | Alu | Name=AluJb |
| ADediting_904776 | chr2_85856985_- | SINE | Alu | Name=AluJb |
| ADediting_904777 | chr2_85857032_- | SINE | Alu | Name=AluJb |
| ADediting_904778 | chr2_85857037_- | SINE | Alu | Name=AluJb |
| ADediting_904779 | chr2_85857145_- | SINE | Alu | Name=AluJb |
| ADediting_904780 | chr2_85857150_- | SINE | Alu | Name=AluJb |
| ADediting_904781 | chr2_85857158_- | SINE | Alu | Name=AluJb |
| ADediting_904782 | chr2_85857159_- | SINE | Alu | Name=AluJb |
| ADediting_904783 | chr2_85857162_- | SINE | Alu | Name=AluJb |
| ADediting_904784 | chr2_85857169_- | SINE | Alu | Name=AluJb |
| ADediting_904785 | chr2_85857183_- | SINE | Alu | Name=AluJb |
| ADediting_904786 | chr2_85857195_- | SINE | Alu | Name=AluJb |
| ADediting_904787 | chr2_85857286_- | SINE | Alu | Name=AluSx |
| ADediting_904788 | chr2_85857345_- | SINE | Alu | Name=AluSx |
| ADediting_904789 | chr2_85857437_- | SINE | Alu | Name=AluSx |
| ADediting_904790 | chr2_85858338_- | SINE | Alu | Name=AluSq2 |
| ADediting_904791 | chr2_85858379_- | SINE | Alu | Name=AluSq2 |
| ADediting_904792 | chr2_85858448_- | SINE | Alu | Name=AluSq2 |
| ADediting_904793 | chr2_85858449_- | SINE | Alu | Name=AluSq2 |
| ADediting_904794 | chr2_85858504_- | SINE | Alu | Name=AluSq2 |
| ADediting_904795 | chr2_85858527_- | SINE | Alu | Name=AluSq2 |
| ADediting_904796 | chr2_85858581_- | SINE | Alu | Name=AluSq2 |
| ADediting_904797 | chr2_85858582_- | SINE | Alu | Name=AluSq2 |
| ADediting_904798 | chr2_85860662_- | SINE | Alu | Name=AluJo |
| ADediting_904799 | chr2_85860690_- | SINE | Alu | Name=AluJo |
| ADediting_904800 | chr2_85860751_- | SINE | Alu | Name=AluJo |
| ADediting_904801 | chr2_85867073_- | SINE | Alu | Name=AluJr |
| ADediting_904802 | chr2_85867086_- | SINE | Alu | Name=AluJr |
| ADediting_904803 | chr2_85870744_- | SINE | Alu | Name=AluSq2 |
| ADediting_904804 | chr2_85870745_- | SINE | Alu | Name=AluSq2 |
| ADediting_904805 | chr2_85870787_- | SINE | Alu | Name=AluSq2 |
| ADediting_904806 | chr2_85870814_- | SINE | Alu | Name=AluSq2 |
| ADediting_904807 | chr2_85870815_- | SINE | Alu | Name=AluSq2 |
| ADediting_904808 | chr2_85870821_- | SINE | Alu | Name=AluSq2 |
| ADediting_904809 | chr2_85870841_- | SINE | Alu | Name=AluSq2 |
| ADediting_904810 | chr2_85870850_- | SINE | Alu | Name=AluSq2 |
| ADediting_904811 | chr2_85875138_- | SINE | Alu | Name=AluJr4 |
| ADediting_904812 | chr2_85875152_- | SINE | Alu | Name=AluJr4 |
| ADediting_904813 | chr2_85875168_- | SINE | Alu | Name=AluJr4 |
| ADediting_904814 | chr2_85875198_- | SINE | Alu | Name=AluJr4 |
| ADediting_904815 | chr2_85875247_- | SINE | Alu | Name=AluJr4 |
| ADediting_904816 | chr2_85876531_- | SINE | Alu | Name=AluSz |
| ADediting_904817 | chr2_85876571_- | SINE | Alu | Name=AluSz |
| ADediting_904818 | chr2_85876591_- | SINE | Alu | Name=AluSz |
| ADediting_904819 | chr2_85876595_- | SINE | Alu | Name=AluSz |
| ADediting_904820 | chr2_85876600_- | SINE | Alu | Name=AluSz |
| ADediting_904821 | chr2_85876603_- | SINE | Alu | Name=AluSz |
| ADediting_904822 | chr2_85876656_- | SINE | Alu | Name=AluSz |
| ADediting_904823 | chr2_85876663_- | SINE | Alu | Name=AluSz |
| ADediting_904824 | chr2_85876666_- | SINE | Alu | Name=AluSz |
| ADediting_904825 | chr2_85876676_- | SINE | Alu | Name=AluSz |
| ADediting_904826 | chr2_85876705_- | SINE | Alu | Name=AluSz |
| ADediting_904827 | chr2_85882582_- | SINE | Alu | Name=AluSz |
| ADediting_904828 | chr2_85886218_- | SINE | Alu | Name=AluJr |
| ADediting_904829 | chr2_85886313_- | SINE | Alu | Name=AluJr |
| ADediting_1564687 | chr2_85851081_- | SINE | Alu | Name=AluSg |
| ADediting_1564688 | chr2_85856708_- | SINE | Alu | Name=AluJr4 |
| ADediting_1564689 | chr2_85856838_- | SINE | Alu | Name=AluJr4 |
| ADediting_1564690 | chr2_85856976_- | SINE | Alu | Name=AluJb |
| ADediting_1564691 | chr2_85857002_- | SINE | Alu | Name=AluJb |
| ADediting_1564692 | chr2_85857049_- | SINE | Alu | Name=AluJb |
| ADediting_1564693 | chr2_85857176_- | SINE | Alu | Name=AluJb |
| ADediting_1564694 | chr2_85858538_- | SINE | Alu | Name=AluSq2 |
| ADediting_1639552 | chr2_85841538_- | SINE | Alu | Name=AluJb |
| ADediting_1639553 | chr2_85849493_- | SINE | Alu | Name=AluY |
Top |
RNA A-to-I editing events in the alternative splicing sites for ST3GAL5 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for ST3GAL5 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for ST3GAL5 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for ST3GAL5 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1639553 | chr2_85849493_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-17-3p | chr2 | 85849490 | 85849496 | 7mer-m8 | 85849489 | 85849511 | 154 | -20.36 |
| ADediting_1639553 | chr2_85849493_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-17-3p | chr2 | 85849490 | 85849496 | 7mer-m8 | 85849489 | 85849511 | 154 | -20.36 |
| ADediting_904726 | chr2_85849181_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-3194-5p | chr2 | 85849179 | 85849185 | 7mer-m8 | 85849178 | 85849200 | 141 | -22.88 |
| ADediting_904726 | chr2_85849181_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-6849-3p | chr2 | 85849180 | 85849186 | 7mer-m8 | 85849179 | 85849199 | 152 | -16.59 |
| ADediting_904726 | chr2_85849181_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-3194-5p | chr2 | 85849179 | 85849185 | 7mer-m8 | 85849178 | 85849200 | 141 | -22.88 |
| ADediting_904726 | chr2_85849181_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-6849-3p | chr2 | 85849180 | 85849186 | 7mer-m8 | 85849179 | 85849199 | 152 | -16.59 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-17-3p | chr2 | 85849325 | 85849331 | 7mer-m8 | 85849324 | 85849346 | 151 | -18.74 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-4418 | chr2 | 85849324 | 85849330 | 7mer-m8 | 85849323 | 85849342 | 142 | -17.37 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-509-3-5p | chr2 | 85849324 | 85849330 | 7mer-m8 | 85849323 | 85849344 | 140 | -17.64 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-509-5p | chr2 | 85849324 | 85849330 | 7mer-m8 | 85849323 | 85849343 | 151 | -15.35 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-17-3p | chr2 | 85849325 | 85849331 | 7mer-m8 | 85849324 | 85849346 | 151 | -18.74 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-4418 | chr2 | 85849324 | 85849330 | 7mer-m8 | 85849323 | 85849342 | 142 | -17.37 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-509-3-5p | chr2 | 85849324 | 85849330 | 7mer-m8 | 85849323 | 85849344 | 140 | -17.64 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-509-5p | chr2 | 85849324 | 85849330 | 7mer-m8 | 85849323 | 85849343 | 151 | -15.35 |
| ADediting_904728 | chr2_85849426_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-3190-5p | chr2 | 85849421 | 85849427 | 7mer-m8 | 85849420 | 85849438 | 152 | -21.15 |
| ADediting_904728 | chr2_85849426_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-323b-3p | chr2 | 85849425 | 85849431 | 7mer-m8 | 85849424 | 85849443 | 157 | -14.82 |
| ADediting_904728 | chr2_85849426_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-548s | chr2 | 85849422 | 85849428 | 7mer-m8 | 85849421 | 85849445 | 153 | -13.2 |
| ADediting_904728 | chr2_85849426_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-3190-5p | chr2 | 85849421 | 85849427 | 7mer-m8 | 85849420 | 85849438 | 152 | -21.15 |
| ADediting_904728 | chr2_85849426_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-323b-3p | chr2 | 85849425 | 85849431 | 7mer-m8 | 85849424 | 85849443 | 157 | -14.82 |
| ADediting_904728 | chr2_85849426_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-548s | chr2 | 85849422 | 85849428 | 7mer-m8 | 85849421 | 85849445 | 153 | -13.2 |
| ADediting_904730 | chr2_85849465_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-34a-3p | chr2 | 85849462 | 85849468 | 7mer-m8 | 85849461 | 85849482 | 140 | -11.17 |
| ADediting_904730 | chr2_85849465_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-34a-3p | chr2 | 85849462 | 85849468 | 7mer-m8 | 85849461 | 85849482 | 140 | -11.17 |
| ADediting_904731 | chr2_85849515_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-6089 | chr2 | 85849510 | 85849516 | 7mer-m8 | 85849509 | 85849532 | 165 | -39.43 |
| ADediting_904731 | chr2_85849515_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-6089 | chr2 | 85849510 | 85849516 | 7mer-m8 | 85849509 | 85849532 | 165 | -39.43 |
| ADediting_904733 | chr2_85849613_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-4433b-5p | chr2 | 85849609 | 85849615 | 7mer-m8 | 85849608 | 85849628 | 140 | -10.81 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1639553 | chr2_85849493_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-20b-3p | chr2 | 85849490 | 85849496 | 7mer-m8 | 85849489 | 85849511 | 153 | -18.18 |
| ADediting_1639553 | chr2_85849493_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-20b-3p | chr2 | 85849490 | 85849496 | 7mer-m8 | 85849489 | 85849511 | 153 | -18.18 |
| ADediting_904726 | chr2_85849181_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-3975 | chr2 | 85849176 | 85849182 | 7mer-m8 | 85849175 | 85849198 | 142 | -14.53 |
| ADediting_904726 | chr2_85849181_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-3975 | chr2 | 85849176 | 85849182 | 7mer-m8 | 85849175 | 85849198 | 142 | -14.53 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-20b-3p | chr2 | 85849325 | 85849331 | 7mer-m8 | 85849324 | 85849343 | 143 | -15.57 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-6073 | chr2 | 85849326 | 85849333 | 8mer-1a | 85849326 | 85849345 | 155 | -15.35 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-921 | chr2 | 85849328 | 85849334 | 7mer-m8 | 85849327 | 85849354 | 141 | -15.83 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-20b-3p | chr2 | 85849325 | 85849331 | 7mer-m8 | 85849324 | 85849343 | 143 | -15.57 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-6073 | chr2 | 85849326 | 85849333 | 8mer-1a | 85849326 | 85849345 | 155 | -15.35 |
| ADediting_904727 | chr2_85849328_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-921 | chr2 | 85849328 | 85849334 | 7mer-m8 | 85849327 | 85849354 | 141 | -15.83 |
| ADediting_904728 | chr2_85849426_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-4794 | chr2 | 85849421 | 85849427 | 7mer-m8 | 85849420 | 85849442 | 151 | -19.1 |
| ADediting_904728 | chr2_85849426_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-664a-5p | chr2 | 85849421 | 85849427 | 7mer-m8 | 85849420 | 85849448 | 142 | -17.23 |
| ADediting_904728 | chr2_85849426_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-4794 | chr2 | 85849421 | 85849427 | 7mer-m8 | 85849420 | 85849442 | 151 | -19.1 |
| ADediting_904728 | chr2_85849426_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-664a-5p | chr2 | 85849421 | 85849427 | 7mer-m8 | 85849420 | 85849448 | 142 | -17.23 |
| ADediting_904731 | chr2_85849515_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-4478 | chr2 | 85849511 | 85849517 | 7mer-m8 | 85849510 | 85849525 | 149 | -25.05 |
| ADediting_904731 | chr2_85849515_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-4649-3p | chr2 | 85849514 | 85849520 | 7mer-m8 | 85849513 | 85849533 | 140 | -14.11 |
| ADediting_904731 | chr2_85849515_- | ENSG00000115525.18 | ENST00000461206.1 | ST3GAL5-208 | hsa-miR-7160-5p | chr2 | 85849513 | 85849519 | 7mer-m8 | 85849512 | 85849531 | 149 | -18.69 |
| ADediting_904731 | chr2_85849515_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-4478 | chr2 | 85849511 | 85849517 | 7mer-m8 | 85849510 | 85849525 | 149 | -25.05 |
| ADediting_904731 | chr2_85849515_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-4649-3p | chr2 | 85849514 | 85849520 | 7mer-m8 | 85849513 | 85849533 | 140 | -14.11 |
| ADediting_904731 | chr2_85849515_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-7160-5p | chr2 | 85849513 | 85849519 | 7mer-m8 | 85849512 | 85849531 | 149 | -18.69 |
| ADediting_904732 | chr2_85849571_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-1227-3p | chr2 | 85849570 | 85849576 | 7mer-m8 | 85849569 | 85849588 | 152 | -22.88 |
| ADediting_904733 | chr2_85849613_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-371b-5p | chr2 | 85849611 | 85849618 | 8mer-1a | 85849611 | 85849632 | 155 | -10.28 |
| ADediting_904733 | chr2_85849613_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-373-5p | chr2 | 85849611 | 85849618 | 8mer-1a | 85849611 | 85849632 | 140 | -9.37 |
| ADediting_904733 | chr2_85849613_- | ENSG00000115525.18 | ENST00000640453.1 | ST3GAL5-259 | hsa-miR-616-5p | chr2 | 85849611 | 85849618 | 8mer-1a | 85849611 | 85849632 | 140 | -7.65 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000377332.8 | ST3GAL5-202 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000393805.6 | ST3GAL5-203 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000393808.8 | ST3GAL5-204 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000638178.1 | ST3GAL5-214 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000638572.2 | ST3GAL5-222 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000638986.1 | ST3GAL5-229 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000639119.1 | ST3GAL5-231 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000639305.1 | ST3GAL5-235 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000639432.1 | ST3GAL5-238 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000640322.1 | ST3GAL5-254 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000640418.1 | ST3GAL5-257 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000640982.1 | ST3GAL5-268 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000115525.18 | ENST00000640992.1 | ST3GAL5-269 | hsa-miR-589-5p | chr2 | 85839738 | 85839744 | 7mer-m8 | 85839737 | 85839758 | 145 | -16.46 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000115525.18 | ENST00000638572.2 | ST3GAL5-222 | hsa-miR-381-3p | chr2 | 85838186 | 85838192 | 7mer-m8 | 85838185 | 85838204 | 143 | -13 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000377332.8 | ST3GAL5-202 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000393805.6 | ST3GAL5-203 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000393808.8 | ST3GAL5-204 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000638178.1 | ST3GAL5-214 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000638572.2 | ST3GAL5-222 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000638986.1 | ST3GAL5-229 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000639119.1 | ST3GAL5-231 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000639305.1 | ST3GAL5-235 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000639432.1 | ST3GAL5-238 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000640322.1 | ST3GAL5-254 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000640418.1 | ST3GAL5-257 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000640982.1 | ST3GAL5-268 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000115525.18 | ENST00000640992.1 | ST3GAL5-269 | hsa-miR-4775 | chr2 | 85839352 | 85839358 | 7mer-m8 | 85839351 | 85839373 | 159 | -17.54 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000377332.8 | ST3GAL5-202 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000393805.6 | ST3GAL5-203 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000393808.8 | ST3GAL5-204 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000638178.1 | ST3GAL5-214 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000638572.2 | ST3GAL5-222 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000638986.1 | ST3GAL5-229 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000639119.1 | ST3GAL5-231 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000639305.1 | ST3GAL5-235 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000639432.1 | ST3GAL5-238 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000640322.1 | ST3GAL5-254 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000640418.1 | ST3GAL5-257 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000640982.1 | ST3GAL5-268 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000115525.18 | ENST00000640992.1 | ST3GAL5-269 | hsa-miR-5688 | chr2 | 85839952 | 85839958 | 7mer-m8 | 85839951 | 85839974 | 153 | -13.1 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000115525.18 | ENST00000638572.2 | ST3GAL5-222 | hsa-miR-589-3p | chr2 | 85837785 | 85837791 | 7mer-m8 | 85837784 | 85837809 | 153 | -14.47 |
| ADediting_496066 | chr15_66496985_- | ENSG00000115525.18 | ENST00000638572.2 | ST3GAL5-222 | hsa-miR-4512 | chr2 | 85838194 | 85838200 | 7mer-m8 | 85838193 | 85838214 | 149 | -14.54 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for ST3GAL5 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000461206.1 | lncRNA |  |  |
| ENST00000640453.1 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_904725 | ENST00000461206.1 | chr2_85849119_- | 458 | -1011.40 | -1010.20 | -1020.40 |
| ADediting_904726 | ENST00000461206.1 | chr2_85849181_- | 396 | -1011.80 | -1010.20 | -1020.40 |
| ADediting_904727 | ENST00000461206.1 | chr2_85849328_- | 249 | -1013.00 | -1010.20 | -1020.40 |
| ADediting_904728 | ENST00000461206.1 | chr2_85849426_- | 151 | -1013.70 | -1010.20 | -1020.40 |
| ADediting_904729 | ENST00000461206.1 | chr2_85849447_- | 130 | -1012.80 | -1010.20 | -1020.40 |
| ADediting_904730 | ENST00000461206.1 | chr2_85849465_- | 112 | -1009.90 | -1010.20 | -1020.40 |
| ADediting_1639553 | ENST00000461206.1 | chr2_85849493_- | 84 | -1010.20 | -1010.20 | -1020.40 |
| ADediting_904731 | ENST00000461206.1 | chr2_85849515_- | 62 | -1010.10 | -1010.20 | -1020.40 |
| ADediting_904732 | ENST00000461206.1 | chr2_85849571_- | 6 | -1009.80 | -1010.20 | -1020.40 |
| ADediting_904725 | ENST00000640453.1 | chr2_85849119_- | 1080 | -1027.00 | -1025.90 | -1040.80 |
| ADediting_904726 | ENST00000640453.1 | chr2_85849181_- | 1018 | -1027.50 | -1025.90 | -1040.80 |
| ADediting_904727 | ENST00000640453.1 | chr2_85849328_- | 871 | -1030.10 | -1025.90 | -1040.80 |
| ADediting_904728 | ENST00000640453.1 | chr2_85849426_- | 773 | -1028.70 | -1025.90 | -1040.80 |
| ADediting_904729 | ENST00000640453.1 | chr2_85849447_- | 752 | -1028.10 | -1025.90 | -1040.80 |
| ADediting_904730 | ENST00000640453.1 | chr2_85849465_- | 734 | -1027.20 | -1025.90 | -1040.80 |
| ADediting_1639553 | ENST00000640453.1 | chr2_85849493_- | 706 | -1025.90 | -1025.90 | -1040.80 |
| ADediting_904731 | ENST00000640453.1 | chr2_85849515_- | 684 | -1028.80 | -1025.90 | -1040.80 |
| ADediting_904732 | ENST00000640453.1 | chr2_85849571_- | 628 | -1025.90 | -1025.90 | -1040.80 |
| ADediting_904733 | ENST00000640453.1 | chr2_85849613_- | 586 | -1026.20 | -1025.90 | -1040.80 |
Top |
Relation with ADAR for ST3GAL5 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_904718 | chr2_85841601_- | 4.16831656286317e-05 | 0.230536368550504 | 0.191042483393271 | 0.0744587617031322 | 1.22660802357962e-11 | 0.372476195339435 |
| CER | ADediting_904771 | chr2_85856843_- | 0.000506227010524297 | 0.280554421827222 | 9.97677832623374e-05 | 0.312338522120715 | 0.488255366681021 | 0.0570212045624227 |
| DLPFC | ADediting_904811 | chr2_85875138_- | 0.502664481293946 | -0.0382111251459857 | 0.0906062365256917 | -0.0962765327557175 | 1.73150565285172e-08 | 0.313322218153284 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 7.12254012420406e-90 | 0.855112314221606 | 1.84006193430264e-104 | 0.885348085396987 | 0.00283951278440426 | 0.168975805855117 |
| AC | 5.06180700933755e-92 | 0.901188510557659 | 1.22765314993465e-84 | 0.885753641257175 | 2.14139820044767e-08 | 0.344981921620756 |
| PCC | 4.12153569449361e-48 | 0.822089303831666 | 1.38663532133922e-53 | 0.846295909896489 | 0.0576922208954156 | 0.137585882537337 |
| CER | 3.55563375421789e-33 | 0.789417729481731 | 7.74524683233106e-20 | 0.656296823274317 | 0.000400288130853778 | 0.285383898784136 |
| TCX | 1.01270532593375e-37 | 0.82019088062316 | 3.42785362012151e-13 | 0.549153602401469 | 0.00797328111047344 | 0.215878143886585 |
| FP | 4.2563100755378e-24 | 0.665131632593398 | 4.5772775020194e-36 | 0.76919566203816 | 0.0451117902303072 | 0.150381322748874 |
| IFG | 2.45550459116091e-07 | 0.832485629796306 | 0.00093616908211951 | 0.620466964290752 | 0.542768559773106 | 0.12776697240804 |
| PG | 1.10751428500966e-70 | 0.906163049518432 | 4.53607240695761e-42 | 0.796528459153169 | 0.77826638520994 | 0.0207842524120747 |
| STG | 5.91647360494308e-21 | 0.812985540606835 | 3.92449584402795e-16 | 0.745919828812825 | 0.168349138680894 | 0.151702215193856 |
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Relation with AD stages for ST3GAL5 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 0.000531798927669589 | 0.327893409652292 |
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RelatedDrugs for ST3GAL5 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ST3GAL5 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| ST3GAL5 | C3714756 | Intellectual Disability | 4 | GENOMICS_ENGLAND |
| ST3GAL5 | C0282577 | Congenital Disorders of Glycosylation | 2 | GENOMICS_ENGLAND |
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