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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for CD164 |
 Gene summary |
| Gene information | Gene symbol | CD164 | Gene ID | 8763 |
| Gene name | CD164 molecule | |
| Synonyms | DFNA66|MGC-24|MGC-24v|MUC-24|endolyn | |
| Cytomap | 6q21 | |
| Type of gene | protein-coding | |
| Description | sialomucin core protein 24CD164 antigen, sialomucinmulti-glycosylated core protein 24 | |
| Modification date | 20200313 | |
| UniProtAcc | Q04900, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| CD164 | GO:0007155 | cell adhesion | 10491205 |
| CD164 | GO:0007157 | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules | 10491205 |
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RNA A-to-I events for CD164 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_1223629(109371347, -), ADediting_1223630(109371348, -), ADediting_1223631(109371362, -), ADediting_1223632(109371388, -), ADediting_1223633(109371415, -), ADediting_1223634(109371451, -), ADediting_1223635(109371468, -), ADediting_1223636(109371482, -), ADediting_1223637(109371492, -), ADediting_1223638(109371500, -), ADediting_1223639(109371516, -), ADediting_1223640(109371521, -), ADediting_1223641(109371524, -), ADediting_1223642(109371534, -), ADediting_1223643(109372550, -), ADediting_1223644(109372557, -), ADediting_1223645(109372618, -), ADediting_1223646(109372619, -), ADediting_1223647(109372639, -), ADediting_1223648(109372673, -), ADediting_1223649(109372697, -), ADediting_1223650(109375231, -), ADediting_1223651(109375298, -), ADediting_1223652(109375307, -), ADediting_1223653(109375358, -), ADediting_1223654(109375360, -), ADediting_1223655(109375372, -), ADediting_1223656(109375373, -), ADediting_1223657(109375382, -), ADediting_1223658(109375412, -), ADediting_1223659(109375425, -), ADediting_1223660(109375432, -), ADediting_1223661(109375454, -), ADediting_1223662(109375495, -), ADediting_1223663(109375534, -), ADediting_1223664(109375535, -), ADediting_1223665(109375540, -), ADediting_1223666(109375554, -), ADediting_1223667(109375573, -), ADediting_1582225(109371315, -), ADediting_1582226(109371359, -), ADediting_1582227(109371389, -), ADediting_1582228(109371397, -), ADediting_1582229(109371443, -), ADediting_1582230(109371522, -), ADediting_1582231(109372540, -), ADediting_1582232(109372629, -), ADediting_1582233(109372638, -), ADediting_1582234(109372674, -), ADediting_1582235(109372679, -), ADediting_1582236(109372691, -), ADediting_1582237(109372692, -), ADediting_1582238(109375351, -), ADediting_1582239(109375413, -), ADediting_1582240(109375437, -), ADediting_1582241(109375469, -), ADediting_1582242(109375541, -), ADediting_1658844(109371469, -), ADediting_1658845(109375517, -), |
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RNA editing positional annotations for CD164 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1223629 | chr6_109371347_- | intronic |
| ADediting_1223630 | chr6_109371348_- | intronic |
| ADediting_1223631 | chr6_109371362_- | intronic |
| ADediting_1223632 | chr6_109371388_- | intronic |
| ADediting_1223633 | chr6_109371415_- | intronic |
| ADediting_1223634 | chr6_109371451_- | intronic |
| ADediting_1223635 | chr6_109371468_- | intronic |
| ADediting_1223636 | chr6_109371482_- | intronic |
| ADediting_1223637 | chr6_109371492_- | intronic |
| ADediting_1223638 | chr6_109371500_- | intronic |
| ADediting_1223639 | chr6_109371516_- | intronic |
| ADediting_1223640 | chr6_109371521_- | intronic |
| ADediting_1223641 | chr6_109371524_- | intronic |
| ADediting_1223642 | chr6_109371534_- | intronic |
| ADediting_1223643 | chr6_109372550_- | intronic |
| ADediting_1223644 | chr6_109372557_- | intronic |
| ADediting_1223645 | chr6_109372618_- | intronic |
| ADediting_1223646 | chr6_109372619_- | intronic |
| ADediting_1223647 | chr6_109372639_- | intronic |
| ADediting_1223648 | chr6_109372673_- | intronic |
| ADediting_1223649 | chr6_109372697_- | intronic |
| ADediting_1223650 | chr6_109375231_- | intronic |
| ADediting_1223651 | chr6_109375298_- | intronic |
| ADediting_1223652 | chr6_109375307_- | intronic |
| ADediting_1223653 | chr6_109375358_- | intronic |
| ADediting_1223654 | chr6_109375360_- | intronic |
| ADediting_1223655 | chr6_109375372_- | intronic |
| ADediting_1223656 | chr6_109375373_- | intronic |
| ADediting_1223657 | chr6_109375382_- | intronic |
| ADediting_1223658 | chr6_109375412_- | intronic |
| ADediting_1223659 | chr6_109375425_- | intronic |
| ADediting_1223660 | chr6_109375432_- | intronic |
| ADediting_1223661 | chr6_109375454_- | intronic |
| ADediting_1223662 | chr6_109375495_- | intronic |
| ADediting_1223663 | chr6_109375534_- | intronic |
| ADediting_1223664 | chr6_109375535_- | intronic |
| ADediting_1223665 | chr6_109375540_- | intronic |
| ADediting_1223666 | chr6_109375554_- | intronic |
| ADediting_1223667 | chr6_109375573_- | intronic |
| ADediting_1582225 | chr6_109371315_- | intronic |
| ADediting_1582226 | chr6_109371359_- | intronic |
| ADediting_1582227 | chr6_109371389_- | intronic |
| ADediting_1582228 | chr6_109371397_- | intronic |
| ADediting_1582229 | chr6_109371443_- | intronic |
| ADediting_1582230 | chr6_109371522_- | intronic |
| ADediting_1582231 | chr6_109372540_- | intronic |
| ADediting_1582232 | chr6_109372629_- | intronic |
| ADediting_1582233 | chr6_109372638_- | intronic |
| ADediting_1582234 | chr6_109372674_- | intronic |
| ADediting_1582235 | chr6_109372679_- | intronic |
| ADediting_1582236 | chr6_109372691_- | intronic |
| ADediting_1582237 | chr6_109372692_- | intronic |
| ADediting_1582238 | chr6_109375351_- | intronic |
| ADediting_1582239 | chr6_109375413_- | intronic |
| ADediting_1582240 | chr6_109375437_- | intronic |
| ADediting_1582241 | chr6_109375469_- | intronic |
| ADediting_1582242 | chr6_109375541_- | intronic |
| ADediting_1658844 | chr6_109371469_- | intronic |
| ADediting_1658845 | chr6_109375517_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1223629 | chr6_109371347_- | SINE | Alu | Name=AluSz |
| ADediting_1223630 | chr6_109371348_- | SINE | Alu | Name=AluSz |
| ADediting_1223631 | chr6_109371362_- | SINE | Alu | Name=AluSz |
| ADediting_1223632 | chr6_109371388_- | SINE | Alu | Name=AluSz |
| ADediting_1223633 | chr6_109371415_- | SINE | Alu | Name=AluSz |
| ADediting_1223634 | chr6_109371451_- | SINE | Alu | Name=AluSz |
| ADediting_1223635 | chr6_109371468_- | SINE | Alu | Name=AluSz |
| ADediting_1223636 | chr6_109371482_- | SINE | Alu | Name=AluSz |
| ADediting_1223637 | chr6_109371492_- | SINE | Alu | Name=AluSz |
| ADediting_1223638 | chr6_109371500_- | SINE | Alu | Name=AluSz |
| ADediting_1223639 | chr6_109371516_- | SINE | Alu | Name=AluSz |
| ADediting_1223640 | chr6_109371521_- | SINE | Alu | Name=AluSz |
| ADediting_1223641 | chr6_109371524_- | SINE | Alu | Name=AluSz |
| ADediting_1223642 | chr6_109371534_- | SINE | Alu | Name=AluSz |
| ADediting_1223650 | chr6_109375231_- | LINE | L1 | Name=L1M5 |
| ADediting_1223653 | chr6_109375358_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223654 | chr6_109375360_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223655 | chr6_109375372_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223656 | chr6_109375373_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223657 | chr6_109375382_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223658 | chr6_109375412_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223659 | chr6_109375425_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223660 | chr6_109375432_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223661 | chr6_109375454_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223662 | chr6_109375495_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223663 | chr6_109375534_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223664 | chr6_109375535_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223665 | chr6_109375540_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223666 | chr6_109375554_- | SINE | Alu | Name=AluSx1 |
| ADediting_1223667 | chr6_109375573_- | SINE | Alu | Name=AluSx1 |
| ADediting_1582225 | chr6_109371315_- | SINE | Alu | Name=AluSz |
| ADediting_1582226 | chr6_109371359_- | SINE | Alu | Name=AluSz |
| ADediting_1582227 | chr6_109371389_- | SINE | Alu | Name=AluSz |
| ADediting_1582228 | chr6_109371397_- | SINE | Alu | Name=AluSz |
| ADediting_1582229 | chr6_109371443_- | SINE | Alu | Name=AluSz |
| ADediting_1582230 | chr6_109371522_- | SINE | Alu | Name=AluSz |
| ADediting_1582238 | chr6_109375351_- | SINE | Alu | Name=AluSx1 |
| ADediting_1582239 | chr6_109375413_- | SINE | Alu | Name=AluSx1 |
| ADediting_1582240 | chr6_109375437_- | SINE | Alu | Name=AluSx1 |
| ADediting_1582241 | chr6_109375469_- | SINE | Alu | Name=AluSx1 |
| ADediting_1582242 | chr6_109375541_- | SINE | Alu | Name=AluSx1 |
| ADediting_1658844 | chr6_109371469_- | SINE | Alu | Name=AluSz |
| ADediting_1658845 | chr6_109375517_- | SINE | Alu | Name=AluSx1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for CD164 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for CD164 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for CD164 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for CD164 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000275080.11 | CD164-201 | hsa-miR-4775 | chr6 | 109368684 | 109368691 | 8mer-1a | 109368684 | 109368706 | 164 | -16.61 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000310786.10 | CD164-202 | hsa-miR-4775 | chr6 | 109368684 | 109368691 | 8mer-1a | 109368684 | 109368706 | 164 | -16.61 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000324953.9 | CD164-203 | hsa-miR-4775 | chr6 | 109368684 | 109368691 | 8mer-1a | 109368684 | 109368706 | 164 | -16.61 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000504373.2 | CD164-207 | hsa-miR-4775 | chr6 | 109368684 | 109368691 | 8mer-1a | 109368684 | 109368706 | 164 | -16.61 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000135535.17 | ENST00000275080.11 | CD164-201 | hsa-miR-4477b | chr6 | 109368579 | 109368585 | 7mer-m8 | 109368578 | 109368599 | 142 | -8.28 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000135535.17 | ENST00000310786.10 | CD164-202 | hsa-miR-4477b | chr6 | 109368579 | 109368585 | 7mer-m8 | 109368578 | 109368599 | 142 | -8.28 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000135535.17 | ENST00000324953.9 | CD164-203 | hsa-miR-4477b | chr6 | 109368579 | 109368585 | 7mer-m8 | 109368578 | 109368599 | 142 | -8.28 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000135535.17 | ENST00000504373.2 | CD164-207 | hsa-miR-4477b | chr6 | 109368579 | 109368585 | 7mer-m8 | 109368578 | 109368599 | 142 | -8.28 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000135535.17 | ENST00000275080.11 | CD164-201 | hsa-miR-4477b | chr6 | 109368579 | 109368585 | 7mer-m8 | 109368578 | 109368599 | 142 | -8.28 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000135535.17 | ENST00000310786.10 | CD164-202 | hsa-miR-4477b | chr6 | 109368579 | 109368585 | 7mer-m8 | 109368578 | 109368599 | 142 | -8.28 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000135535.17 | ENST00000324953.9 | CD164-203 | hsa-miR-4477b | chr6 | 109368579 | 109368585 | 7mer-m8 | 109368578 | 109368599 | 142 | -8.28 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000135535.17 | ENST00000504373.2 | CD164-207 | hsa-miR-4477b | chr6 | 109368579 | 109368585 | 7mer-m8 | 109368578 | 109368599 | 142 | -8.28 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000135535.17 | ENST00000275080.11 | CD164-201 | hsa-miR-337-3p | chr6 | 109368718 | 109368724 | 7mer-m8 | 109368717 | 109368739 | 155 | -14.96 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000135535.17 | ENST00000310786.10 | CD164-202 | hsa-miR-337-3p | chr6 | 109368718 | 109368724 | 7mer-m8 | 109368717 | 109368739 | 155 | -14.96 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000135535.17 | ENST00000324953.9 | CD164-203 | hsa-miR-337-3p | chr6 | 109368718 | 109368724 | 7mer-m8 | 109368717 | 109368739 | 155 | -14.96 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000135535.17 | ENST00000504373.2 | CD164-207 | hsa-miR-337-3p | chr6 | 109368718 | 109368724 | 7mer-m8 | 109368717 | 109368739 | 155 | -14.96 |
| ADediting_286380 | chr11_79422188_- | ENSG00000135535.17 | ENST00000275080.11 | CD164-201 | hsa-miR-5579-3p | chr6 | 109368017 | 109368024 | 8mer-1a | 109368017 | 109368038 | 150 | -16.21 |
| ADediting_286380 | chr11_79422188_- | ENSG00000135535.17 | ENST00000310786.10 | CD164-202 | hsa-miR-5579-3p | chr6 | 109368017 | 109368024 | 8mer-1a | 109368017 | 109368038 | 150 | -16.21 |
| ADediting_286380 | chr11_79422188_- | ENSG00000135535.17 | ENST00000324953.9 | CD164-203 | hsa-miR-5579-3p | chr6 | 109368017 | 109368024 | 8mer-1a | 109368017 | 109368038 | 150 | -16.21 |
| ADediting_286380 | chr11_79422188_- | ENSG00000135535.17 | ENST00000413644.6 | CD164-204 | hsa-miR-5579-3p | chr6 | 109368017 | 109368024 | 8mer-1a | 109368017 | 109368038 | 150 | -16.21 |
| ADediting_286380 | chr11_79422188_- | ENSG00000135535.17 | ENST00000504373.2 | CD164-207 | hsa-miR-5579-3p | chr6 | 109368017 | 109368024 | 8mer-1a | 109368017 | 109368038 | 150 | -16.21 |
| ADediting_286380 | chr11_79422188_- | ENSG00000135535.17 | ENST00000512821.5 | CD164-210 | hsa-miR-5579-3p | chr6 | 109368017 | 109368024 | 8mer-1a | 109368017 | 109368038 | 150 | -16.21 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000275080.11 | CD164-201 | hsa-miR-4775 | chr6 | 109366850 | 109366856 | 7mer-m8 | 109366849 | 109366870 | 154 | -6.8 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000275080.11 | CD164-201 | hsa-miR-4775 | chr6 | 109366999 | 109367005 | 7mer-m8 | 109366998 | 109367021 | 148 | -9.71 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000310786.10 | CD164-202 | hsa-miR-4775 | chr6 | 109366850 | 109366856 | 7mer-m8 | 109366849 | 109366870 | 154 | -6.8 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000310786.10 | CD164-202 | hsa-miR-4775 | chr6 | 109366999 | 109367005 | 7mer-m8 | 109366998 | 109367021 | 148 | -9.71 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000324953.9 | CD164-203 | hsa-miR-4775 | chr6 | 109366850 | 109366856 | 7mer-m8 | 109366849 | 109366870 | 154 | -6.8 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000324953.9 | CD164-203 | hsa-miR-4775 | chr6 | 109366999 | 109367005 | 7mer-m8 | 109366998 | 109367021 | 148 | -9.71 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000413644.6 | CD164-204 | hsa-miR-4775 | chr6 | 109366850 | 109366856 | 7mer-m8 | 109366849 | 109366870 | 154 | -6.8 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000413644.6 | CD164-204 | hsa-miR-4775 | chr6 | 109366999 | 109367005 | 7mer-m8 | 109366998 | 109367021 | 148 | -9.71 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000504373.2 | CD164-207 | hsa-miR-4775 | chr6 | 109366850 | 109366856 | 7mer-m8 | 109366849 | 109366870 | 154 | -6.8 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000135535.17 | ENST00000504373.2 | CD164-207 | hsa-miR-4775 | chr6 | 109366999 | 109367005 | 7mer-m8 | 109366998 | 109367021 | 148 | -9.71 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for CD164 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for CD164 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1223630 | chr6_109371348_- | 4.62472784307139e-05 | 0.326209756241518 | 0.00890565692701111 | 0.212894176527065 | 0.619046758263295 | -0.0409216730950657 |
| CER | ADediting_1223633 | chr6_109371415_- | 5.21715935639575e-06 | 0.36229812980901 | 0.000441367817139578 | 0.28338498249291 | 0.581240414492315 | 0.0453923130328649 |
| CER | ADediting_1223639 | chr6_109371516_- | 7.25316685851307e-05 | 0.3181730400878 | 0.000707369380898178 | 0.273519121917765 | 0.633910317821941 | -0.0391969927450226 |
| CER | ADediting_1223643 | chr6_109372550_- | 6.43511467281317e-10 | 0.477565387709979 | 2.16396847728378e-07 | 0.408157238370971 | 0.321985188818818 | 0.0814114502636533 |
| CER | ADediting_1223644 | chr6_109372557_- | 4.35734634400023e-15 | 0.583996594360141 | 6.36292945053946e-10 | 0.477685955807979 | 0.155663054787793 | 0.116506438175406 |
| TCX | ADediting_1223644 | chr6_109372557_- | 0.0242365027269772 | 0.183951890480146 | 0.199110944087832 | -0.105434919235546 | 8.22251372394113e-08 | 0.420835171526141 |
| CER | ADediting_1223645 | chr6_109372618_- | 1.48325868602136e-18 | 0.638566306533994 | 9.23521295184887e-13 | 0.540643825483263 | 0.221946517262057 | 0.100311730585143 |
| TCX | ADediting_1223645 | chr6_109372618_- | 0.00167026358101318 | 0.254541732455274 | 0.695073923911006 | -0.0322665179208277 | 2.00402123809236e-05 | 0.340572272831771 |
| CER | ADediting_1223646 | chr6_109372619_- | 1.68850925992714e-09 | 0.467078090277566 | 2.86341959376742e-07 | 0.404387993238538 | 0.75827412360901 | -0.0253354238243652 |
| CER | ADediting_1223647 | chr6_109372639_- | 0.000116777625268192 | 0.309412450001148 | 0.00593207261844562 | 0.223677465950524 | 0.534543052282585 | -0.0511058277144227 |
| CER | ADediting_1223648 | chr6_109372673_- | 1.86607754977635e-13 | 0.554258454848724 | 5.98245493648847e-10 | 0.478344124037903 | 0.136693914311886 | 0.122078612986657 |
| TCX | ADediting_1223648 | chr6_109372673_- | 1.17295887331729e-05 | 0.34941221579379 | 0.901236686969851 | 0.0102178748417578 | 3.29661763744536e-06 | 0.369358879214783 |
| CER | ADediting_1223649 | chr6_109372697_- | 4.51929260733254e-09 | 0.455997077549577 | 0.000156855145260534 | 0.303844658577436 | 0.493100819982319 | 0.0563886429036239 |
| TCX | ADediting_1223649 | chr6_109372697_- | 0.000123781996447915 | 0.30832197588393 | 0.905584451181269 | 0.00976592049420161 | 3.45377508158786e-06 | 0.368650131943388 |
| CER | ADediting_1223650 | chr6_109375231_- | 6.90345577849674e-08 | 0.42307141015901 | 3.47333297780449e-06 | 0.368564081072109 | 0.913703528718472 | -0.00892270306784828 |
| CER | ADediting_1223651 | chr6_109375298_- | 9.95610519982294e-08 | 0.418369750640796 | 1.65372625968454e-06 | 0.379666263799044 | 0.961440346706363 | -0.00398073471840853 |
| CER | ADediting_1223652 | chr6_109375307_- | 1.0017699126844e-08 | 0.44673956353386 | 6.98822357859471e-07 | 0.39206106202545 | 0.129832373813877 | 0.124239524672845 |
| TCX | ADediting_1223652 | chr6_109375307_- | 0.217097777369707 | 0.101366893546357 | 0.0235358648900893 | -0.184855481363894 | 4.74677267432805e-11 | 0.504250844669515 |
| CER | ADediting_1223653 | chr6_109375358_- | 0.00090560888640873 | 0.268201797352695 | 0.000120291629185362 | 0.308857964750844 | 0.743866904564505 | 0.0268981416360976 |
| CER | ADediting_1223654 | chr6_109375360_- | 9.90681524414563e-06 | 0.352145255174123 | 0.000334472250187372 | 0.28902127355788 | 0.61206686501756 | -0.041737716429012 |
| CER | ADediting_1223657 | chr6_109375382_- | 5.19205912689328e-06 | 0.362373183713194 | 4.13875416188453e-05 | 0.328158203242398 | 0.562011430040728 | 0.0477172756445942 |
| CER | ADediting_1223658 | chr6_109375412_- | 2.76430295136046e-09 | 0.461579234505961 | 1.2693674255747e-07 | 0.415210555005866 | 0.420473664018085 | 0.0662589061224897 |
| CER | ADediting_1223659 | chr6_109375425_- | 0.000153348747575981 | 0.304275235898618 | 0.000272683481647781 | 0.29309883706542 | 0.647194169501169 | 0.0376699317139164 |
| CER | ADediting_1223660 | chr6_109375432_- | 2.61246353299302e-08 | 0.435212447831747 | 3.75840908833414e-07 | 0.400682726335536 | 0.402829349714724 | 0.0688009387464296 |
| TCX | ADediting_1223660 | chr6_109375432_- | 0.531865276134543 | 0.0514407112022227 | 0.0859770369217721 | -0.140672210197591 | 2.47341780378151e-05 | 0.337024499967884 |
| CER | ADediting_1223661 | chr6_109375454_- | 1.16609725004972e-07 | 0.416317814686703 | 2.69015860172794e-06 | 0.372433297307026 | 0.315067103739096 | 0.0825796568022333 |
| TCX | ADediting_1223661 | chr6_109375454_- | 0.279153201302829 | 0.0889319265171099 | 0.583193861212562 | -0.0451581499877407 | 0.000174339425292326 | 0.301823033542016 |
| CER | ADediting_1223662 | chr6_109375495_- | 3.79185831904373e-05 | 0.329685240178684 | 7.54741798630302e-06 | 0.356494539993601 | 0.749529400621006 | 0.0262828294690985 |
| CER | ADediting_1223665 | chr6_109375540_- | 0.00023171201264166 | 0.296306427722744 | 4.99497368980412e-05 | 0.324850330071438 | 0.778021102950581 | -0.0232079862181872 |
| CER | ADediting_1223666 | chr6_109375554_- | 0.00127686833578858 | 0.26062375905867 | 0.000120341196698209 | 0.308850252007162 | 0.785424993678197 | -0.0224143428251033 |
| CER | ADediting_1582231 | chr6_109372540_- | 5.45517789681046e-07 | 0.395533031626433 | 5.57426963749525e-06 | 0.361265836745681 | 0.233314932373991 | 0.0979002326279151 |
| CER | ADediting_1582232 | chr6_109372629_- | 1.98555362141344e-06 | 0.376968255348902 | 0.000109563170537861 | 0.31060141654154 | 0.795833135652625 | -0.0213021248097437 |
| CER | ADediting_1582233 | chr6_109372638_- | 2.55812836182897e-09 | 0.462450374215397 | 1.02659983517935e-06 | 0.386589337701789 | 0.960818265866047 | -0.00404500645683379 |
| CER | ADediting_1582235 | chr6_109372679_- | 1.65757997223338e-06 | 0.379632073604807 | 0.000459843216572537 | 0.28254150834256 | 0.639226333662641 | -0.0385843080756059 |
| CER | ADediting_1582236 | chr6_109372691_- | 7.68964003385384e-10 | 0.475655592933703 | 1.97793726745074e-06 | 0.377025207935767 | 0.142746788161235 | 0.120240136431655 |
| TCX | ADediting_1582236 | chr6_109372691_- | 1.44436493246814e-05 | 0.346008713835327 | 0.838334041026689 | 0.0167979103108261 | 8.03990490783729e-06 | 0.355489541980877 |
| CER | ADediting_1582237 | chr6_109372692_- | 3.08025049925661e-08 | 0.433187678431458 | 1.75978023387794e-05 | 0.342741914114225 | 0.674448077194975 | 0.0345760197209833 |
| TCX | ADediting_1582237 | chr6_109372692_- | 5.82216489337364e-05 | 0.322126037198302 | 0.73901844117749 | 0.0274261811156291 | 0.00178323968944294 | 0.253037491465634 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 4.44779157972943e-30 | 0.586859402995644 | 2.02101862479226e-20 | 0.493352972336432 | 0.1104880500631 | 0.0908263658977341 |
| AC | 1.06171924109648e-61 | 0.818759670039379 | 5.16436475595441e-33 | 0.662877412346119 | 1.02535647836266e-19 | 0.532566510925733 |
| PCC | 2.12819604559947e-16 | 0.548539586171074 | 1.52392027051136e-15 | 0.535126228197921 | 0.000130720437367448 | 0.273281051263829 |
| CER | 1.11747342459822e-21 | 0.679829175952912 | 1.44979648820807e-16 | 0.608548148213743 | 6.91305304941864e-07 | 0.392213507945063 |
| TCX | 1.04756003561443e-14 | 0.577316437083272 | 0.512309007597864 | 0.0539127352902215 | 9.15485407214995e-20 | 0.655323491640284 |
| FP | 3.78483465721368e-11 | 0.469582708968807 | 2.64644232770233e-16 | 0.563486564606074 | 0.00136387654599079 | 0.238227438234286 |
| IFG | 0.00982260562986776 | 0.506223467200168 | 0.074292835820231 | 0.363250756548764 | 0.0194302638382763 | 0.46413080849426 |
| PG | 7.45403360030766e-40 | 0.783378919286499 | 6.17134196143222e-17 | 0.562875017911841 | 0.12648011848124 | 0.112450344376193 |
| STG | 2.04643731439125e-08 | 0.565771795072352 | 4.59489880051225e-06 | 0.476561283543864 | 0.223123307441018 | 0.134332993591108 |
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Relation with AD stages for CD164 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 2.35513357426847e-05 | 0.39480251119489 |
| TCX | 6.46032621636175e-10 | 0.555372115711907 |
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RelatedDrugs for CD164 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CD164 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| CD164 | C0000786 | Spontaneous abortion | 1 | CTD_human |
| CD164 | C0000822 | Abortion, Tubal | 1 | CTD_human |
| CD164 | C0452138 | Sensorineural hearing loss, bilateral | 1 | CLINGEN |
| CD164 | C1852282 | DEAFNESS, AUTOSOMAL DOMINANT 1 (disorder) | 1 | CLINGEN |
| CD164 | C4283893 | DEAFNESS, AUTOSOMAL DOMINANT 66 | 1 | CLINGEN;CTD_human |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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