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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for PTCH2

check button Gene summary
Gene informationGene symbol

PTCH2

Gene ID

8643

Gene namepatched 2
SynonymsPTC2
Cytomap

1p34.1

Type of geneprotein-coding
Descriptionprotein patched homolog 2patched homolog 2
Modification date20200313
UniProtAcc

Q9Y6C5,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for PTCH2

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_116850(44823709, -), ADediting_116851(44823722, -), ADediting_116852(44823728, -), ADediting_116853(44823734, -), ADediting_116854(44823747, -), ADediting_116855(44823767, -), ADediting_116856(44823773, -), ADediting_116857(44823809, -), ADediting_116858(44823815, -), ADediting_116859(44823817, -), ADediting_116860(44823827, -), ADediting_116861(44823830, -), ADediting_116862(44823831, -), ADediting_116863(44823839, -), ADediting_116864(44823844, -), ADediting_116865(44823869, -), ADediting_116866(44823875, -), ADediting_116867(44823891, -), ADediting_116868(44823897, -), ADediting_116869(44823924, -), ADediting_116870(44823932, -), ADediting_116871(44823934, -), ADediting_116872(44823935, -), ADediting_116873(44824555, -), ADediting_116874(44824560, -), ADediting_116875(44824600, -), ADediting_116876(44824622, -), ADediting_116877(44824626, -), ADediting_116878(44824636, -), ADediting_116879(44824797, -), ADediting_116880(44824866, -), ADediting_116881(44824923, -), ADediting_116882(44825240, -), ADediting_116883(44825249, -), ADediting_116884(44825259, -), ADediting_116885(44825266, -), ADediting_116886(44825275, -), ADediting_116887(44825284, -), ADediting_116888(44825365, -), ADediting_116889(44825605, -), ADediting_116890(44825638, -), ADediting_116891(44825664, -), ADediting_116892(44825665, -), ADediting_116893(44825751, -), ADediting_116894(44825754, -), ADediting_116895(44825758, -), ADediting_116896(44825773, -), ADediting_116897(44825982, -), ADediting_116898(44825983, -), ADediting_116899(44826005, -), ADediting_116900(44826063, -), ADediting_116901(44826132, -), ADediting_116902(44833499, -), ADediting_116903(44833515, -), ADediting_116904(44833529, -), ADediting_116905(44833597, -), ADediting_116906(44833601, -), ADediting_116907(44833734, -), ADediting_116908(44833735, -), ADediting_116909(44833745, -), ADediting_116910(44833761, -), ADediting_116911(44833817, -), ADediting_116912(44833897, -), ADediting_116913(44833917, -), ADediting_116914(44834196, -), ADediting_116915(44834251, -), ADediting_116916(44834257, -), ADediting_116917(44834268, -), ADediting_116918(44834274, -), ADediting_116919(44834280, -), ADediting_116920(44834284, -), ADediting_116921(44834302, -), ADediting_116922(44834305, -), ADediting_116923(44834341, -), ADediting_116924(44834365, -), ADediting_116925(44834395, -), ADediting_116926(44834402, -), ADediting_116927(44835105, -), ADediting_116928(44835131, -), ADediting_116929(44835167, -), ADediting_116930(44835195, -), ADediting_116931(44835203, -), ADediting_116932(44835205, -), ADediting_116933(44835213, -), ADediting_116934(44835221, -), ADediting_116935(44835227, -), ADediting_116936(44835230, -), ADediting_116937(44835256, -), ADediting_116938(44835258, -), ADediting_116939(44835270, -), ADediting_116940(44835294, -), ADediting_116941(44835307, -), ADediting_116942(44835313, -), ADediting_116943(44835324, -), ADediting_116944(44835346, -), ADediting_116945(44836394, -), ADediting_116946(44836407, -), ADediting_116947(44836447, -), ADediting_116948(44836465, -), ADediting_116949(44836505, -), ADediting_116950(44836511, -), ADediting_116951(44836515, -), ADediting_116952(44836528, -), ADediting_116953(44836536, -), ADediting_116954(44836540, -), ADediting_116955(44836541, -), ADediting_116956(44836545, -), ADediting_116957(44836559, -), ADediting_116958(44836560, -), ADediting_116959(44836583, -), ADediting_116960(44836605, -), ADediting_116961(44836622, -), ADediting_116962(44836642, -), ADediting_116963(44836697, -), ADediting_116964(44836699, -), ADediting_116965(44836759, -), ADediting_116966(44836773, -), ADediting_116967(44836830, -), ADediting_116968(44836840, -), ADediting_116969(44836876, -), ADediting_116970(44836902, -), ADediting_116971(44836905, -), ADediting_116972(44836906, -), ADediting_116973(44836938, -), ADediting_116974(44837351, -), ADediting_116975(44837382, -), ADediting_116976(44837391, -), ADediting_116977(44837392, -), ADediting_116978(44837398, -), ADediting_116979(44837402, -), ADediting_116980(44837407, -), ADediting_116981(44837447, -), ADediting_116982(44837449, -), ADediting_116983(44837450, -), ADediting_116984(44837457, -), ADediting_116985(44837458, -), ADediting_116986(44837481, -), ADediting_116987(44837486, -), ADediting_116988(44837623, -), ADediting_116989(44837672, -), ADediting_116990(44837673, -), ADediting_116991(44837695, -), ADediting_116992(44837822, -), ADediting_116993(44837834, -), ADediting_116994(44837835, -), ADediting_116995(44837889, -), ADediting_116996(44837960, -), ADediting_116997(44837970, -), ADediting_116998(44838013, -), ADediting_116999(44838019, -), ADediting_117000(44838020, -), ADediting_117001(44838025, -), ADediting_117002(44838030, -), ADediting_117003(44838044, -), ADediting_117004(44838318, -), ADediting_117005(44838327, -), ADediting_117006(44838338, -), ADediting_117007(44838339, -), ADediting_117008(44838353, -), ADediting_117009(44838379, -), ADediting_117010(44838402, -), ADediting_117011(44838423, -), ADediting_117012(44838442, -), ADediting_117013(44838467, -), ADediting_117014(44838513, -), ADediting_117015(44838777, -), ADediting_117016(44838787, -), ADediting_117017(44838788, -), ADediting_117018(44838805, -), ADediting_117019(44838812, -), ADediting_117020(44838825, -), ADediting_117021(44838843, -), ADediting_117022(44838848, -), ADediting_117023(44838858, -), ADediting_117024(44838879, -), ADediting_117025(44838880, -), ADediting_117026(44838884, -), ADediting_117027(44838889, -), ADediting_117028(44838897, -), ADediting_117029(44838902, -), ADediting_117030(44838908, -), ADediting_117031(44838914, -), ADediting_117032(44838985, -), ADediting_117033(44839131, -), ADediting_117034(44839132, -), ADediting_117035(44839190, -), ADediting_117036(44839201, -), ADediting_117037(44839204, -), ADediting_117038(44839207, -), ADediting_117039(44839210, -), ADediting_117040(44839216, -), ADediting_117041(44839263, -), ADediting_117042(44839299, -), ADediting_117043(44839300, -), ADediting_117044(44839315, -), ADediting_117045(44839316, -), ADediting_117046(44839320, -), ADediting_117047(44839910, -), ADediting_117048(44840170, -), ADediting_117049(44840171, -), ADediting_117050(44840192, -), ADediting_117051(44840199, -), ADediting_117052(44840200, -), ADediting_117053(44840208, -), ADediting_117054(44840214, -), ADediting_117055(44840223, -), ADediting_117056(44840231, -), ADediting_117057(44840241, -), ADediting_117058(44840282, -), ADediting_117059(44840302, -), ADediting_117060(44840322, -), ADediting_117061(44840372, -), ADediting_117062(44840373, -), ADediting_117063(44840454, -), ADediting_117064(44840481, -), ADediting_117065(44840528, -), ADediting_117066(44840531, -), ADediting_117067(44840538, -), ADediting_117068(44840545, -), ADediting_117069(44840548, -), ADediting_117070(44840551, -), ADediting_117071(44840562, -), ADediting_117072(44840563, -), ADediting_117073(44840589, -), ADediting_117074(44840594, -), ADediting_117075(44840599, -), ADediting_117076(44840603, -), ADediting_117077(44840611, -), ADediting_117078(44840627, -), ADediting_117079(44840684, -), ADediting_117080(44840699, -), ADediting_117081(44840782, -), ADediting_117082(44840794, -), ADediting_117083(44840811, -), ADediting_117084(44840818, -), ADediting_117085(44840825, -), ADediting_117086(44840942, -), ADediting_117087(44840952, -), ADediting_117088(44840955, -), ADediting_117089(44840964, -), ADediting_117090(44841031, -), ADediting_117091(44841039, -), ADediting_117092(44841049, -), ADediting_117093(44841070, -), ADediting_117094(44841087, -), ADediting_117095(44841088, -), ADediting_117096(44841106, -), ADediting_117097(44841107, -), ADediting_117098(44841109, -), ADediting_117099(44842292, -), ADediting_117100(44842342, -), ADediting_117101(44842411, -), ADediting_117102(44842418, -), ADediting_117103(44842441, -), ADediting_117104(44842444, -), ADediting_117105(44842458, -), ADediting_117106(44842461, -), ADediting_117107(44842480, -), ADediting_117108(44842483, -), ADediting_117109(44842511, -), ADediting_117110(44842516, -), ADediting_117111(44842521, -), ADediting_117112(44842543, -), ADediting_1520174(44824730, -), ADediting_1520175(44824746, -), ADediting_1520176(44824758, -), ADediting_1520177(44825956, -), ADediting_1520178(44836910, -), ADediting_1520179(44839002, -), ADediting_1520180(44842337, -), ADediting_1520181(44842454, -), ADediting_1520182(44842457, -), ADediting_1520183(44842492, -),

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RNA editing positional annotations for PTCH2 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_116850chr1_44823709_-intronic
ADediting_116851chr1_44823722_-intronic
ADediting_116852chr1_44823728_-intronic
ADediting_116853chr1_44823734_-intronic
ADediting_116854chr1_44823747_-intronic
ADediting_116855chr1_44823767_-intronic
ADediting_116856chr1_44823773_-intronic
ADediting_116857chr1_44823809_-intronic
ADediting_116858chr1_44823815_-intronic
ADediting_116859chr1_44823817_-intronic
ADediting_116860chr1_44823827_-intronic
ADediting_116861chr1_44823830_-intronic
ADediting_116862chr1_44823831_-intronic
ADediting_116863chr1_44823839_-intronic
ADediting_116864chr1_44823844_-intronic
ADediting_116865chr1_44823869_-intronic
ADediting_116866chr1_44823875_-intronic
ADediting_116867chr1_44823891_-intronic
ADediting_116868chr1_44823897_-intronic
ADediting_116869chr1_44823924_-intronic
ADediting_116870chr1_44823932_-intronic
ADediting_116871chr1_44823934_-intronic
ADediting_116872chr1_44823935_-intronic
ADediting_116873chr1_44824555_-intronic
ADediting_116874chr1_44824560_-intronic
ADediting_116875chr1_44824600_-intronic
ADediting_116876chr1_44824622_-intronic
ADediting_116877chr1_44824626_-intronic
ADediting_116878chr1_44824636_-intronic
ADediting_116879chr1_44824797_-intronic
ADediting_116880chr1_44824866_-intronic
ADediting_116881chr1_44824923_-intronic
ADediting_116882chr1_44825240_-intronic
ADediting_116883chr1_44825249_-intronic
ADediting_116884chr1_44825259_-intronic
ADediting_116885chr1_44825266_-intronic
ADediting_116886chr1_44825275_-intronic
ADediting_116887chr1_44825284_-intronic
ADediting_116888chr1_44825365_-intronic
ADediting_116889chr1_44825605_-intronic
ADediting_116890chr1_44825638_-intronic
ADediting_116891chr1_44825664_-intronic
ADediting_116892chr1_44825665_-intronic
ADediting_116893chr1_44825751_-intronic
ADediting_116894chr1_44825754_-intronic
ADediting_116895chr1_44825758_-intronic
ADediting_116896chr1_44825773_-intronic
ADediting_116897chr1_44825982_-intronic
ADediting_116898chr1_44825983_-intronic
ADediting_116899chr1_44826005_-intronic
ADediting_116900chr1_44826063_-intronic
ADediting_116901chr1_44826132_-intronic
ADediting_116902chr1_44833499_-intronic
ADediting_116903chr1_44833515_-intronic
ADediting_116904chr1_44833529_-intronic
ADediting_116905chr1_44833597_-intronic
ADediting_116906chr1_44833601_-intronic
ADediting_116907chr1_44833734_-intronic
ADediting_116908chr1_44833735_-intronic
ADediting_116909chr1_44833745_-intronic
ADediting_116910chr1_44833761_-intronic
ADediting_116911chr1_44833817_-intronic
ADediting_116912chr1_44833897_-intronic
ADediting_116913chr1_44833917_-intronic
ADediting_116914chr1_44834196_-intronic
ADediting_116915chr1_44834251_-intronic
ADediting_116916chr1_44834257_-intronic
ADediting_116917chr1_44834268_-intronic
ADediting_116918chr1_44834274_-intronic
ADediting_116919chr1_44834280_-intronic
ADediting_116920chr1_44834284_-intronic
ADediting_116921chr1_44834302_-intronic
ADediting_116922chr1_44834305_-intronic
ADediting_116923chr1_44834341_-intronic
ADediting_116924chr1_44834365_-intronic
ADediting_116925chr1_44834395_-intronic
ADediting_116926chr1_44834402_-intronic
ADediting_116927chr1_44835105_-intronic
ADediting_116928chr1_44835131_-intronic
ADediting_116929chr1_44835167_-intronic
ADediting_116930chr1_44835195_-intronic
ADediting_116931chr1_44835203_-intronic
ADediting_116932chr1_44835205_-intronic
ADediting_116933chr1_44835213_-intronic
ADediting_116934chr1_44835221_-intronic
ADediting_116935chr1_44835227_-intronic
ADediting_116936chr1_44835230_-intronic
ADediting_116937chr1_44835256_-intronic
ADediting_116938chr1_44835258_-intronic
ADediting_116939chr1_44835270_-intronic
ADediting_116940chr1_44835294_-intronic
ADediting_116941chr1_44835307_-intronic
ADediting_116942chr1_44835313_-intronic
ADediting_116943chr1_44835324_-intronic
ADediting_116944chr1_44835346_-intronic
ADediting_116945chr1_44836394_-intronic
ADediting_116946chr1_44836407_-intronic
ADediting_116947chr1_44836447_-intronic
ADediting_116948chr1_44836465_-intronic
ADediting_116949chr1_44836505_-intronic
ADediting_116950chr1_44836511_-intronic
ADediting_116951chr1_44836515_-intronic
ADediting_116952chr1_44836528_-intronic
ADediting_116953chr1_44836536_-intronic
ADediting_116954chr1_44836540_-intronic
ADediting_116955chr1_44836541_-intronic
ADediting_116956chr1_44836545_-intronic
ADediting_116957chr1_44836559_-intronic
ADediting_116958chr1_44836560_-intronic
ADediting_116959chr1_44836583_-intronic
ADediting_116960chr1_44836605_-intronic
ADediting_116961chr1_44836622_-intronic
ADediting_116962chr1_44836642_-intronic
ADediting_116963chr1_44836697_-intronic
ADediting_116964chr1_44836699_-intronic
ADediting_116965chr1_44836759_-intronic
ADediting_116966chr1_44836773_-intronic
ADediting_116967chr1_44836830_-intronic
ADediting_116968chr1_44836840_-intronic
ADediting_116969chr1_44836876_-intronic
ADediting_116970chr1_44836902_-intronic
ADediting_116971chr1_44836905_-intronic
ADediting_116972chr1_44836906_-intronic
ADediting_116973chr1_44836938_-intronic
ADediting_116974chr1_44837351_-intronic
ADediting_116975chr1_44837382_-intronic
ADediting_116976chr1_44837391_-intronic
ADediting_116977chr1_44837392_-intronic
ADediting_116978chr1_44837398_-intronic
ADediting_116979chr1_44837402_-intronic
ADediting_116980chr1_44837407_-intronic
ADediting_116981chr1_44837447_-intronic
ADediting_116982chr1_44837449_-intronic
ADediting_116983chr1_44837450_-intronic
ADediting_116984chr1_44837457_-intronic
ADediting_116985chr1_44837458_-intronic
ADediting_116986chr1_44837481_-intronic
ADediting_116987chr1_44837486_-intronic
ADediting_116988chr1_44837623_-intronic
ADediting_116989chr1_44837672_-intronic
ADediting_116990chr1_44837673_-intronic
ADediting_116991chr1_44837695_-intronic
ADediting_116992chr1_44837822_-intronic
ADediting_116993chr1_44837834_-intronic
ADediting_116994chr1_44837835_-intronic
ADediting_116995chr1_44837889_-intronic
ADediting_116996chr1_44837960_-intronic
ADediting_116997chr1_44837970_-intronic
ADediting_116998chr1_44838013_-intronic
ADediting_116999chr1_44838019_-intronic
ADediting_117000chr1_44838020_-intronic
ADediting_117001chr1_44838025_-intronic
ADediting_117002chr1_44838030_-intronic
ADediting_117003chr1_44838044_-intronic
ADediting_117004chr1_44838318_-intronic
ADediting_117005chr1_44838327_-intronic
ADediting_117006chr1_44838338_-intronic
ADediting_117007chr1_44838339_-intronic
ADediting_117008chr1_44838353_-intronic
ADediting_117009chr1_44838379_-intronic
ADediting_117010chr1_44838402_-intronic
ADediting_117011chr1_44838423_-intronic
ADediting_117012chr1_44838442_-intronic
ADediting_117013chr1_44838467_-intronic
ADediting_117014chr1_44838513_-intronic
ADediting_117015chr1_44838777_-intronic
ADediting_117016chr1_44838787_-intronic
ADediting_117017chr1_44838788_-intronic
ADediting_117018chr1_44838805_-intronic
ADediting_117019chr1_44838812_-intronic
ADediting_117020chr1_44838825_-intronic
ADediting_117021chr1_44838843_-intronic
ADediting_117022chr1_44838848_-intronic
ADediting_117023chr1_44838858_-intronic
ADediting_117024chr1_44838879_-intronic
ADediting_117025chr1_44838880_-intronic
ADediting_117026chr1_44838884_-intronic
ADediting_117027chr1_44838889_-intronic
ADediting_117028chr1_44838897_-intronic
ADediting_117029chr1_44838902_-intronic
ADediting_117030chr1_44838908_-intronic
ADediting_117031chr1_44838914_-intronic
ADediting_117032chr1_44838985_-intronic
ADediting_117033chr1_44839131_-intronic
ADediting_117034chr1_44839132_-intronic
ADediting_117035chr1_44839190_-intronic
ADediting_117036chr1_44839201_-intronic
ADediting_117037chr1_44839204_-intronic
ADediting_117038chr1_44839207_-intronic
ADediting_117039chr1_44839210_-intronic
ADediting_117040chr1_44839216_-intronic
ADediting_117041chr1_44839263_-intronic
ADediting_117042chr1_44839299_-intronic
ADediting_117043chr1_44839300_-intronic
ADediting_117044chr1_44839315_-intronic
ADediting_117045chr1_44839316_-intronic
ADediting_117046chr1_44839320_-intronic
ADediting_117047chr1_44839910_-intronic
ADediting_117048chr1_44840170_-intronic
ADediting_117049chr1_44840171_-intronic
ADediting_117050chr1_44840192_-intronic
ADediting_117051chr1_44840199_-intronic
ADediting_117052chr1_44840200_-intronic
ADediting_117053chr1_44840208_-intronic
ADediting_117054chr1_44840214_-intronic
ADediting_117055chr1_44840223_-intronic
ADediting_117056chr1_44840231_-intronic
ADediting_117057chr1_44840241_-intronic
ADediting_117058chr1_44840282_-intronic
ADediting_117059chr1_44840302_-intronic
ADediting_117060chr1_44840322_-intronic
ADediting_117061chr1_44840372_-intronic
ADediting_117062chr1_44840373_-intronic
ADediting_117063chr1_44840454_-intronic
ADediting_117064chr1_44840481_-intronic
ADediting_117065chr1_44840528_-intronic
ADediting_117066chr1_44840531_-intronic
ADediting_117067chr1_44840538_-intronic
ADediting_117068chr1_44840545_-intronic
ADediting_117069chr1_44840548_-intronic
ADediting_117070chr1_44840551_-intronic
ADediting_117071chr1_44840562_-intronic
ADediting_117072chr1_44840563_-intronic
ADediting_117073chr1_44840589_-intronic
ADediting_117074chr1_44840594_-intronic
ADediting_117075chr1_44840599_-intronic
ADediting_117076chr1_44840603_-intronic
ADediting_117077chr1_44840611_-intronic
ADediting_117078chr1_44840627_-intronic
ADediting_117079chr1_44840684_-intronic
ADediting_117080chr1_44840699_-intronic
ADediting_117081chr1_44840782_-intronic
ADediting_117082chr1_44840794_-intronic
ADediting_117083chr1_44840811_-intronic
ADediting_117084chr1_44840818_-intronic
ADediting_117085chr1_44840825_-intronic
ADediting_117086chr1_44840942_-intronic
ADediting_117087chr1_44840952_-intronic
ADediting_117088chr1_44840955_-intronic
ADediting_117089chr1_44840964_-intronic
ADediting_117090chr1_44841031_-intronic
ADediting_117091chr1_44841039_-intronic
ADediting_117092chr1_44841049_-intronic
ADediting_117093chr1_44841070_-intronic
ADediting_117094chr1_44841087_-intronic
ADediting_117095chr1_44841088_-intronic
ADediting_117096chr1_44841106_-intronic
ADediting_117097chr1_44841107_-intronic
ADediting_117098chr1_44841109_-intronic
ADediting_117099chr1_44842292_-intronic
ADediting_117100chr1_44842342_-intronic
ADediting_117101chr1_44842411_-intronic
ADediting_117102chr1_44842418_-intronic
ADediting_117103chr1_44842441_-intronic
ADediting_117104chr1_44842444_-intronic
ADediting_117105chr1_44842458_-intronic
ADediting_117106chr1_44842461_-intronic
ADediting_117107chr1_44842480_-intronic
ADediting_117108chr1_44842483_-intronic
ADediting_117109chr1_44842511_-intronic
ADediting_117110chr1_44842516_-intronic
ADediting_117111chr1_44842521_-intronic
ADediting_117112chr1_44842543_-intronic
ADediting_1520174chr1_44824730_-intronic
ADediting_1520175chr1_44824746_-intronic
ADediting_1520176chr1_44824758_-intronic
ADediting_1520177chr1_44825956_-intronic
ADediting_1520178chr1_44836910_-intronic
ADediting_1520179chr1_44839002_-intronic
ADediting_1520180chr1_44842337_-intronic
ADediting_1520181chr1_44842454_-intronic
ADediting_1520182chr1_44842457_-intronic
ADediting_1520183chr1_44842492_-intronic

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_116850chr1_44823709_-SINEAluName=AluJb
ADediting_116851chr1_44823722_-SINEAluName=AluJb
ADediting_116852chr1_44823728_-SINEAluName=AluJb
ADediting_116853chr1_44823734_-SINEAluName=AluJb
ADediting_116854chr1_44823747_-SINEAluName=AluJb
ADediting_116855chr1_44823767_-SINEAluName=AluJb
ADediting_116856chr1_44823773_-SINEAluName=AluJb
ADediting_116857chr1_44823809_-SINEAluName=AluJb
ADediting_116858chr1_44823815_-SINEAluName=AluJb
ADediting_116859chr1_44823817_-SINEAluName=AluJb
ADediting_116860chr1_44823827_-SINEAluName=AluJb
ADediting_116861chr1_44823830_-SINEAluName=AluJb
ADediting_116862chr1_44823831_-SINEAluName=AluJb
ADediting_116863chr1_44823839_-SINEAluName=AluJb
ADediting_116864chr1_44823844_-SINEAluName=AluJb
ADediting_116865chr1_44823869_-SINEAluName=AluJb
ADediting_116866chr1_44823875_-SINEAluName=AluJb
ADediting_116867chr1_44823891_-SINEAluName=AluJb
ADediting_116868chr1_44823897_-SINEAluName=AluJb
ADediting_116869chr1_44823924_-SINEAluName=AluJb
ADediting_116870chr1_44823932_-SINEAluName=AluJb
ADediting_116871chr1_44823934_-SINEAluName=AluJb
ADediting_116872chr1_44823935_-SINEAluName=AluJb
ADediting_116873chr1_44824555_-SINEAluName=AluJr
ADediting_116874chr1_44824560_-SINEAluName=AluJr
ADediting_116875chr1_44824600_-SINEAluName=AluJr
ADediting_116876chr1_44824622_-SINEAluName=AluJr
ADediting_116877chr1_44824626_-SINEAluName=AluJr
ADediting_116878chr1_44824636_-SINEAluName=AluJr
ADediting_116879chr1_44824797_-SINEAluName=AluSx1
ADediting_116880chr1_44824866_-SINEAluName=AluSx1
ADediting_116881chr1_44824923_-SINEAluName=AluSx1
ADediting_116882chr1_44825240_-SINEAluName=AluSz
ADediting_116883chr1_44825249_-SINEAluName=AluSz
ADediting_116884chr1_44825259_-SINEAluName=AluSz
ADediting_116885chr1_44825266_-SINEAluName=AluSz
ADediting_116886chr1_44825275_-SINEAluName=AluSz
ADediting_116887chr1_44825284_-SINEAluName=AluSz
ADediting_116888chr1_44825365_-SINEAluName=AluSz
ADediting_116889chr1_44825605_-SINEAluName=AluSx
ADediting_116890chr1_44825638_-SINEAluName=AluSx
ADediting_116891chr1_44825664_-SINEAluName=AluSx
ADediting_116892chr1_44825665_-SINEAluName=AluSx
ADediting_116893chr1_44825751_-SINEAluName=AluSx
ADediting_116894chr1_44825754_-SINEAluName=AluSx
ADediting_116895chr1_44825758_-SINEAluName=AluSx
ADediting_116896chr1_44825773_-SINEAluName=AluSx
ADediting_116897chr1_44825982_-SINEAluName=AluSq2
ADediting_116898chr1_44825983_-SINEAluName=AluSq2
ADediting_116899chr1_44826005_-SINEAluName=AluSq2
ADediting_116900chr1_44826063_-SINEAluName=AluSq2
ADediting_116901chr1_44826132_-SINEAluName=AluSq2
ADediting_116902chr1_44833499_-SINEAluName=AluJr
ADediting_116903chr1_44833515_-SINEAluName=AluJr
ADediting_116904chr1_44833529_-SINEAluName=AluJr
ADediting_116905chr1_44833597_-SINEAluName=AluJr
ADediting_116906chr1_44833601_-SINEAluName=AluJr
ADediting_116907chr1_44833734_-SINEAluName=AluJr
ADediting_116908chr1_44833735_-SINEAluName=AluJr
ADediting_116909chr1_44833745_-SINEAluName=AluJr
ADediting_116911chr1_44833817_-SINEAluName=Alu
ADediting_116912chr1_44833897_-SINEAluName=AluJo
ADediting_116913chr1_44833917_-SINEAluName=AluJo
ADediting_116914chr1_44834196_-SINEAluName=AluSq2
ADediting_116915chr1_44834251_-SINEAluName=AluSq2
ADediting_116916chr1_44834257_-SINEAluName=AluSq2
ADediting_116917chr1_44834268_-SINEAluName=AluSq2
ADediting_116918chr1_44834274_-SINEAluName=AluSq2
ADediting_116919chr1_44834280_-SINEAluName=AluSq2
ADediting_116920chr1_44834284_-SINEAluName=AluSq2
ADediting_116921chr1_44834302_-SINEAluName=AluSq2
ADediting_116922chr1_44834305_-SINEAluName=AluSq2
ADediting_116923chr1_44834341_-SINEAluName=AluSq2
ADediting_116924chr1_44834365_-SINEAluName=AluSq2
ADediting_116925chr1_44834395_-SINEAluName=AluSq2
ADediting_116926chr1_44834402_-SINEAluName=AluSq2
ADediting_116927chr1_44835105_-SINEAluName=AluJb
ADediting_116928chr1_44835131_-SINEAluName=AluJb
ADediting_116929chr1_44835167_-SINEAluName=AluJb
ADediting_116930chr1_44835195_-SINEAluName=AluJb
ADediting_116931chr1_44835203_-SINEAluName=AluJb
ADediting_116932chr1_44835205_-SINEAluName=AluJb
ADediting_116933chr1_44835213_-SINEAluName=AluJb
ADediting_116934chr1_44835221_-SINEAluName=AluJb
ADediting_116935chr1_44835227_-SINEAluName=AluJb
ADediting_116936chr1_44835230_-SINEAluName=AluJb
ADediting_116937chr1_44835256_-SINEAluName=AluJb
ADediting_116938chr1_44835258_-SINEAluName=AluJb
ADediting_116939chr1_44835270_-SINEAluName=AluJb
ADediting_116940chr1_44835294_-SINEAluName=AluJb
ADediting_116941chr1_44835307_-SINEAluName=AluJb
ADediting_116942chr1_44835313_-SINEAluName=AluJb
ADediting_116943chr1_44835324_-SINEAluName=AluJb
ADediting_116944chr1_44835346_-SINEAluName=AluJb
ADediting_116945chr1_44836394_-SINEAluName=AluJo
ADediting_116946chr1_44836407_-SINEAluName=AluJo
ADediting_116947chr1_44836447_-SINEAluName=AluSg
ADediting_116948chr1_44836465_-SINEAluName=AluSg
ADediting_116949chr1_44836505_-SINEAluName=AluSg
ADediting_116950chr1_44836511_-SINEAluName=AluSg
ADediting_116951chr1_44836515_-SINEAluName=AluSg
ADediting_116952chr1_44836528_-SINEAluName=AluSg
ADediting_116953chr1_44836536_-SINEAluName=AluSg
ADediting_116954chr1_44836540_-SINEAluName=AluSg
ADediting_116955chr1_44836541_-SINEAluName=AluSg
ADediting_116956chr1_44836545_-SINEAluName=AluSg
ADediting_116957chr1_44836559_-SINEAluName=AluSg
ADediting_116958chr1_44836560_-SINEAluName=AluSg
ADediting_116959chr1_44836583_-SINEAluName=AluSg
ADediting_116960chr1_44836605_-SINEAluName=AluSg
ADediting_116961chr1_44836622_-SINEAluName=AluSg
ADediting_116962chr1_44836642_-SINEAluName=AluSg
ADediting_116963chr1_44836697_-SINEAluName=AluSg
ADediting_116964chr1_44836699_-SINEAluName=AluSg
ADediting_116965chr1_44836759_-SINEAluName=AluJo
ADediting_116966chr1_44836773_-SINEAluName=AluJo
ADediting_116967chr1_44836830_-SINEAluName=AluJo
ADediting_116968chr1_44836840_-SINEAluName=AluJo
ADediting_116969chr1_44836876_-SINEAluName=AluJo
ADediting_116970chr1_44836902_-SINEAluName=AluJo
ADediting_116971chr1_44836905_-SINEAluName=AluJo
ADediting_116972chr1_44836906_-SINEAluName=AluJo
ADediting_116973chr1_44836938_-SINEAluName=AluJo
ADediting_116974chr1_44837351_-SINEAluName=AluSx
ADediting_116975chr1_44837382_-SINEAluName=AluSx
ADediting_116976chr1_44837391_-SINEAluName=AluSx
ADediting_116977chr1_44837392_-SINEAluName=AluSx
ADediting_116978chr1_44837398_-SINEAluName=AluSx
ADediting_116979chr1_44837402_-SINEAluName=AluSx
ADediting_116980chr1_44837407_-SINEAluName=AluSx
ADediting_116981chr1_44837447_-SINEAluName=AluSx
ADediting_116982chr1_44837449_-SINEAluName=AluSx
ADediting_116983chr1_44837450_-SINEAluName=AluSx
ADediting_116984chr1_44837457_-SINEAluName=AluSx
ADediting_116985chr1_44837458_-SINEAluName=AluSx
ADediting_116986chr1_44837481_-SINEAluName=AluSx
ADediting_116987chr1_44837486_-SINEAluName=AluSx
ADediting_116988chr1_44837623_-SINEAluName=AluJo
ADediting_116989chr1_44837672_-SINEAluName=AluJo
ADediting_116990chr1_44837673_-SINEAluName=AluJo
ADediting_116991chr1_44837695_-SINEAluName=AluJo
ADediting_116992chr1_44837822_-SINEAluName=AluYm1
ADediting_116993chr1_44837834_-SINEAluName=AluYm1
ADediting_116994chr1_44837835_-SINEAluName=AluYm1
ADediting_116995chr1_44837889_-SINEAluName=AluYm1
ADediting_116996chr1_44837960_-SINEAluName=AluYm1
ADediting_116997chr1_44837970_-SINEAluName=AluYm1
ADediting_116998chr1_44838013_-SINEAluName=AluYm1
ADediting_116999chr1_44838019_-SINEAluName=AluYm1
ADediting_117000chr1_44838020_-SINEAluName=AluYm1
ADediting_117001chr1_44838025_-SINEAluName=AluYm1
ADediting_117002chr1_44838030_-SINEAluName=AluYm1
ADediting_117003chr1_44838044_-SINEAluName=AluYm1
ADediting_117004chr1_44838318_-SINEAluName=AluSq2
ADediting_117005chr1_44838327_-SINEAluName=AluSq2
ADediting_117006chr1_44838338_-SINEAluName=AluSq2
ADediting_117007chr1_44838339_-SINEAluName=AluSq2
ADediting_117008chr1_44838353_-SINEAluName=AluSq2
ADediting_117009chr1_44838379_-SINEAluName=AluSq2
ADediting_117010chr1_44838402_-SINEAluName=AluSq2
ADediting_117011chr1_44838423_-SINEAluName=AluSq2
ADediting_117012chr1_44838442_-SINEAluName=AluSq2
ADediting_117013chr1_44838467_-SINEAluName=AluSq2
ADediting_117014chr1_44838513_-SINEAluName=AluSq2
ADediting_117015chr1_44838777_-SINEAluName=AluSx
ADediting_117016chr1_44838787_-SINEAluName=AluSx
ADediting_117017chr1_44838788_-SINEAluName=AluSx
ADediting_117018chr1_44838805_-SINEAluName=AluSx
ADediting_117019chr1_44838812_-SINEAluName=AluSx
ADediting_117020chr1_44838825_-SINEAluName=AluSx
ADediting_117021chr1_44838843_-SINEAluName=AluSx
ADediting_117022chr1_44838848_-SINEAluName=AluSx
ADediting_117023chr1_44838858_-SINEAluName=AluSx
ADediting_117024chr1_44838879_-SINEAluName=AluSx
ADediting_117025chr1_44838880_-SINEAluName=AluSx
ADediting_117026chr1_44838884_-SINEAluName=AluSx
ADediting_117027chr1_44838889_-SINEAluName=AluSx
ADediting_117028chr1_44838897_-SINEAluName=AluSx
ADediting_117029chr1_44838902_-SINEAluName=AluSx
ADediting_117030chr1_44838908_-SINEAluName=AluSx
ADediting_117031chr1_44838914_-SINEAluName=AluSx
ADediting_117032chr1_44838985_-SINEAluName=AluSx
ADediting_117033chr1_44839131_-SINEAluName=AluSx3
ADediting_117034chr1_44839132_-SINEAluName=AluSx3
ADediting_117035chr1_44839190_-SINEAluName=AluSx3
ADediting_117036chr1_44839201_-SINEAluName=AluSx3
ADediting_117037chr1_44839204_-SINEAluName=AluSx3
ADediting_117038chr1_44839207_-SINEAluName=AluSx3
ADediting_117039chr1_44839210_-SINEAluName=AluSx3
ADediting_117040chr1_44839216_-SINEAluName=AluSx3
ADediting_117041chr1_44839263_-SINEAluName=AluSx3
ADediting_117042chr1_44839299_-SINEAluName=AluSx3
ADediting_117043chr1_44839300_-SINEAluName=AluSx3
ADediting_117044chr1_44839315_-SINEAluName=AluSx3
ADediting_117045chr1_44839316_-SINEAluName=AluSx3
ADediting_117046chr1_44839320_-SINEAluName=AluSx3
ADediting_117048chr1_44840170_-SINEAluName=AluSx1
ADediting_117049chr1_44840171_-SINEAluName=AluSx1
ADediting_117050chr1_44840192_-SINEAluName=AluSx1
ADediting_117051chr1_44840199_-SINEAluName=AluSx1
ADediting_117052chr1_44840200_-SINEAluName=AluSx1
ADediting_117053chr1_44840208_-SINEAluName=AluSx1
ADediting_117054chr1_44840214_-SINEAluName=AluSx1
ADediting_117055chr1_44840223_-SINEAluName=AluSx1
ADediting_117056chr1_44840231_-SINEAluName=AluSx1
ADediting_117057chr1_44840241_-SINEAluName=AluSx1
ADediting_117058chr1_44840282_-SINEAluName=AluSx1
ADediting_117059chr1_44840302_-SINEAluName=AluSx1
ADediting_117060chr1_44840322_-SINEAluName=AluSx1
ADediting_117061chr1_44840372_-SINEAluName=AluSx1
ADediting_117062chr1_44840373_-SINEAluName=AluSx1
ADediting_117063chr1_44840454_-SINEAluName=AluSz
ADediting_117064chr1_44840481_-SINEAluName=AluSz
ADediting_117065chr1_44840528_-SINEAluName=AluSz
ADediting_117066chr1_44840531_-SINEAluName=AluSz
ADediting_117067chr1_44840538_-SINEAluName=AluSz
ADediting_117068chr1_44840545_-SINEAluName=AluSz
ADediting_117069chr1_44840548_-SINEAluName=AluSz
ADediting_117070chr1_44840551_-SINEAluName=AluSz
ADediting_117071chr1_44840562_-SINEAluName=AluSz
ADediting_117072chr1_44840563_-SINEAluName=AluSz
ADediting_117073chr1_44840589_-SINEAluName=AluSz
ADediting_117074chr1_44840594_-SINEAluName=AluSz
ADediting_117075chr1_44840599_-SINEAluName=AluSz
ADediting_117076chr1_44840603_-SINEAluName=AluSz
ADediting_117077chr1_44840611_-SINEAluName=AluSz
ADediting_117078chr1_44840627_-SINEAluName=AluSz
ADediting_117079chr1_44840684_-SINEAluName=AluSz
ADediting_117080chr1_44840699_-SINEAluName=AluSz
ADediting_117081chr1_44840782_-SINEAluName=AluSz6
ADediting_117082chr1_44840794_-SINEAluName=AluSz6
ADediting_117083chr1_44840811_-SINEAluName=AluSz6
ADediting_117084chr1_44840818_-SINEAluName=AluSz6
ADediting_117085chr1_44840825_-SINEAluName=AluSz6
ADediting_117086chr1_44840942_-SINEAluName=AluSz6
ADediting_117087chr1_44840952_-SINEAluName=AluSz6
ADediting_117088chr1_44840955_-SINEAluName=AluSz6
ADediting_117089chr1_44840964_-SINEAluName=AluSz6
ADediting_117090chr1_44841031_-SINEAluName=AluSz6
ADediting_117091chr1_44841039_-SINEAluName=AluSz6
ADediting_117092chr1_44841049_-SINEAluName=AluSz6
ADediting_117093chr1_44841070_-SINEAluName=AluSz6
ADediting_117094chr1_44841087_-SINEAluName=AluSz6
ADediting_117095chr1_44841088_-SINEAluName=AluSz6
ADediting_117096chr1_44841106_-SINEAluName=AluSz6
ADediting_117097chr1_44841107_-SINEAluName=AluSz6
ADediting_117098chr1_44841109_-SINEAluName=AluSz6
ADediting_117099chr1_44842292_-SINEAluName=AluSx1
ADediting_117100chr1_44842342_-SINEAluName=AluSx1
ADediting_117101chr1_44842411_-SINEAluName=AluSx1
ADediting_117102chr1_44842418_-SINEAluName=AluSx1
ADediting_117103chr1_44842441_-SINEAluName=AluSx1
ADediting_117104chr1_44842444_-SINEAluName=AluSx1
ADediting_117105chr1_44842458_-SINEAluName=AluSx1
ADediting_117106chr1_44842461_-SINEAluName=AluSx1
ADediting_117107chr1_44842480_-SINEAluName=AluSx1
ADediting_117108chr1_44842483_-SINEAluName=AluSx1
ADediting_117109chr1_44842511_-SINEAluName=AluSx1
ADediting_117110chr1_44842516_-SINEAluName=AluSx1
ADediting_117111chr1_44842521_-SINEAluName=AluSx1
ADediting_117112chr1_44842543_-SINEAluName=AluSx1
ADediting_1520174chr1_44824730_-SINEAluName=AluSx1
ADediting_1520175chr1_44824746_-SINEAluName=AluSx1
ADediting_1520176chr1_44824758_-SINEAluName=AluSx1
ADediting_1520177chr1_44825956_-SINEAluName=AluSq2
ADediting_1520178chr1_44836910_-SINEAluName=AluJo
ADediting_1520179chr1_44839002_-SINEAluName=AluSx
ADediting_1520180chr1_44842337_-SINEAluName=AluSx1
ADediting_1520181chr1_44842454_-SINEAluName=AluSx1
ADediting_1520182chr1_44842457_-SINEAluName=AluSx1
ADediting_1520183chr1_44842492_-SINEAluName=AluSx1

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RNA A-to-I editing events in the alternative splicing sites for PTCH2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PTCH2

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
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check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
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check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for PTCH2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for PTCH2


check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1471004chr9_63819627_+ENSG00000117425.14ENST00000438067.5PTCH2-202hsa-miR-4477bchr144820604448206107mer-m84482060344820623146-17.75
ADediting_1471004chr9_63819627_+ENSG00000117425.14ENST00000447098.6PTCH2-203hsa-miR-4477bchr144820604448206107mer-m84482060344820623146-17.75
ADediting_1535954chr14_101045974_+ENSG00000117425.14ENST00000372192.4PTCH2-201hsa-miR-381-3pchr144822213448222197mer-m84482221244822233147-15.76

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PTCH2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for PTCH2

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFCADediting_116850chr1_44823709_-0.4258662308124330.04538600388000810.405674549001234-0.04739261539181531.92362489261176e-110.369143132104686
DLPFCADediting_116851chr1_44823722_-0.413412292335430.04661685775435390.365899717888064-0.05152803677822765.03487075514154e-090.324323782766158
DLPFCADediting_116852chr1_44823728_-0.2178756693438140.07018125468889660.564603506428587-0.03283942063533034.22670647261257e-090.325846965832907
DLPFCADediting_116857chr1_44823809_-0.690878216989533-0.02267446654174750.0268253379358652-0.1257579906649213.93775624865504e-120.380726970236825
DLPFCADediting_116859chr1_44823817_-0.3311906456405790.05537123273250960.147461699074276-0.08246538535923132.41441819183626e-180.468808182044532
DLPFCADediting_116860chr1_44823827_-0.366408832107172-0.0514734074823460.0155505992905732-0.1373100116771442.4533281240849e-110.36732531362409
DLPFCADediting_116861chr1_44823830_-0.7353606932066610.01927337441123760.392325617980945-0.04875192910796891.18322414562263e-090.33668513499244
DLPFCADediting_116862chr1_44823831_-0.800394168664993-0.01441767452923420.219288603461224-0.0699667967380934.67058301230861e-090.324978645765185
DLPFCADediting_116864chr1_44823844_-0.2273385688533870.06876339659878770.9491159047875950.003639254396399681.45638661503488e-100.353653175287235
DLPFCADediting_116866chr1_44823875_-0.3390833069538420.05447564735399550.839654225218878-0.01153812912732176.34901685241801e-090.322291725861258
DLPFCADediting_116868chr1_44823897_-0.2473359213846260.06589912244805260.781971027604799-0.0157811946084971.86889996983002e-100.351685651463873
DLPFCADediting_116870chr1_44823932_-0.01470429458061250.1384502891857490.1936807919316280.07401952913381136.8075023832664e-110.359570831443722
DLPFCADediting_116871chr1_44823934_-0.02254763363711130.1295299043026110.2795780002878650.06160240140737727.24860927371754e-110.359086902256613
DLPFCADediting_116872chr1_44823935_-0.01742465095744470.1349666819665680.3263077931444810.05593218272749711.17695911103023e-140.419671912211409
CERADediting_116881chr1_44824923_-0.1392014225559380.1213096134047574.11522079717133e-050.3282579228523340.01013922530184610.209344764219992
DLPFCADediting_116886chr1_44825275_-0.5061895684096930.03789664094057460.673113455408334-0.02405481603396283.04295160065788e-120.382566945124727
DLPFCADediting_116887chr1_44825284_-0.76379703486888-0.0171351295099070.214760198600442-0.07065766829970492.11529589491042e-080.311496284598007
DLPFCADediting_116897chr1_44825982_-0.3625157331482080.05189235368063190.388538366345237-0.0491426339233188.51713403921843e-130.391490581786361
DLPFCADediting_116901chr1_44826132_-0.9478668579569290.003728712083420660.0600590655366161-0.1069228531612325.56268312458515e-150.424343268083061
DLPFCADediting_116905chr1_44833597_-0.169039500110601-0.07830795020172050.00270443771852619-0.169805947085846.47241932918972e-090.322122374765307
DLPFCADediting_116919chr1_44834280_-0.07856587950155920.1000617195181860.5659626611408490.03272490807875381.19962207000661e-090.336570200776139
DLPFCADediting_116937chr1_44835256_-0.01490680847478040.1381722931906160.2690526052381780.06296586587221986.70247098297747e-090.321814844302772
CERADediting_116947chr1_44836447_-0.397607249850030.06956585950267270.01237803355720530.2037776178451082.35957002369746e-050.3378226647703
CERADediting_116948chr1_44836465_-0.895515052899220.01081311127793050.1031073747845740.1336069751325882.99348290848987e-060.370821549126089
DLPFCADediting_116953chr1_44836536_-0.6984171474433720.0220927004778890.450211897866057-0.04303861953044231.3675199537755e-090.335473957924588
DLPFCADediting_116955chr1_44836541_-0.615206470900920.0286588262892730.581853520859394-0.03139560316278413.37466647394598e-090.327794524900022
DLPFCADediting_116958chr1_44836560_-0.04573039519032460.1135630140453610.8821521136298530.00845355619112533.3590411086163e-100.347005785115184
CERADediting_116968chr1_44836840_-0.04927142590196010.1608411256350610.006012647501054930.2233271355905897.9054266538919e-050.316609007391956
CERADediting_116969chr1_44836876_-0.0127393769081410.2029634679333760.0001632376620377740.3030834177280590.00939464404329380.21143817793197
CERADediting_116971chr1_44836905_-0.001735799512391240.2536582664030557.48377436565303e-060.3566289172137170.01782758766499490.193232374750644
DLPFCADediting_116982chr1_44837449_-0.6322771196015190.02728350960114810.356996168383407-0.05249116453538591.16597516172946e-130.404909833836064
DLPFCADediting_116983chr1_44837450_-0.982121758943370.001277903468961180.216256504732539-0.07042824162106871.01285708131483e-100.356494397618636
DLPFCADediting_116984chr1_44837457_-0.4800280644402840.04025909774305820.507595051736416-0.03777157340296125.38417984614667e-130.394639694313404
DLPFCADediting_116985chr1_44837458_-0.7018611447916570.02182769669410910.375287510906627-0.05052815955273944.85914459021092e-110.36215577327652
CERADediting_116990chr1_44837673_-0.0003003744785169210.2911755048953656.79231303251529e-060.3581629567012350.06140641938717270.153109427003435
DLPFCADediting_116995chr1_44837889_-0.001359586467231510.181148036700670.2614665905197380.0639713058705516.64641786223501e-200.487425875071334
DLPFCADediting_116996chr1_44837960_-0.6961433206023130.02226792398859310.272377433167371-0.06253130550524014.10016363770702e-120.380437445663519
DLPFCADediting_117006chr1_44838338_-0.03517059269040350.1196879868762780.4236899199512720.04559956343157163.04717362689487e-120.382557079394631
DLPFCADediting_117011chr1_44838423_-0.2776573245687490.06184857431823570.159228543443463-0.0801454406910683.63121922897989e-180.466619592255985
DLPFCADediting_117059chr1_44840302_-0.840254994275494-0.01149431061075670.0193162808310319-0.1328147013035331.70250817693534e-170.458188338998384
DLPFCADediting_117060chr1_44840322_-0.128308399655452-0.08656349357260140.000864783079064599-0.1882643312585541.60297411119502e-110.370498503053225
DLPFCADediting_117065chr1_44840528_-0.565237806222019-0.03278596272890540.0342349947918488-0.1203030793785529.40741107040812e-120.374423946907018
DLPFCADediting_117066chr1_44840531_-0.8795987476818850.008638101590508150.0692120870319964-0.1033415350980335.02115236891143e-180.464870327624773
DLPFCADediting_117067chr1_44840538_-0.251034703238302-0.06538727992808820.00418592573359272-0.1622294477174981.05188645524865e-120.39002977749415
CERADediting_117101chr1_44842411_-0.0367154217460180.1707330373972988.202040855319e-060.3551713973036710.05026877409181690.160149533015196

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC8.5115936924612e-180.462000083989112.88694830617163e-360.6340675593406733.62052173907511e-090.327187651924118
AC2.79941418264109e-310.6489674907507861.5815329697423e-290.6341346647704831.86097783015773e-140.459405066697226
PCC3.59333180870129e-160.5450284694692169.26531278229201e-160.5385734088680292.43158360746111e-070.36312682201616
CER0.003292172952284960.2384949995602922.91772760177174e-120.5304573060240081.17592426251482e-070.416208488214088
TCX7.44121121625032e-050.3177090520522713.34788334162751e-120.5292164080225140.5430734142551360.0500445508560179
FP1.01616317338385e-100.4603050414488072.62415228169765e-060.3437770425801561.4954617100012e-130.516962151835741
IFG0.0001579296063678670.6850551064265031.58557434653549e-050.7499827870448860.01176546607133930.495572867002365
STG0.08234532718579660.1906619848832330.3678537064200040.09949948601138242.19272953060709e-050.445292841403979

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Relation with AD stages for PTCH2

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.
CERADediting_116967chr1_44836830_-0.001243089511406480.306735855794449
CERADediting_116969chr1_44836876_-0.0005040173915271110.329180377254981
CERADediting_116971chr1_44836905_-0.0006234289699611390.324047013576819
CERADediting_117084chr1_44840818_-0.0001083400982487440.363878424975914
CERADediting_117102chr1_44842418_-0.0006633811507775360.322530309933258

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.
CER3.64109521875217e-060.428867893764904
TCX0.0003638335844056220.339924862393588

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RelatedDrugs for PTCH2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for PTCH2

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource
PTCH2C0020255Hydrocephalus3GENOMICS_ENGLAND
PTCH2C0238198Gastrointestinal Stromal Tumors1CTD_human
PTCH2C3179349Gastrointestinal Stromal Sarcoma1CTD_human