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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for TRIM5 |
 Gene summary |
| Gene information | Gene symbol | TRIM5 | Gene ID | 85363 |
| Gene name | tripartite motif containing 5 | |
| Synonyms | RNF88|TRIM5alpha | |
| Cytomap | 11p15.4 | |
| Type of gene | protein-coding | |
| Description | tripartite motif-containing protein 5RING-type E3 ubiquitin transferase TRIM5ring finger protein 88tripartite motif containing 5 transcript variant iotatripartite motif containing 5 transcript variant kappatripartite motif protein TRIM5 | |
| Modification date | 20200313 | |
| UniProtAcc | Q9C035, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| TRIM5 | GO:0002218 | activation of innate immune response | 21512573 |
| TRIM5 | GO:0006914 | autophagy | 25127057 |
| TRIM5 | GO:0043123 | positive regulation of I-kappaB kinase/NF-kappaB signaling | 23077300 |
| TRIM5 | GO:0045087 | innate immune response | 18248090 |
| TRIM5 | GO:0046597 | negative regulation of viral entry into host cell | 18248090 |
| TRIM5 | GO:0070534 | protein K63-linked ubiquitination | 21512573 |
| TRIM5 | GO:1902187 | negative regulation of viral release from host cell | 18248090 |
Top |
RNA A-to-I events for TRIM5 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_258419(5663943, -), ADediting_258420(5663945, -), ADediting_258421(5663957, -), ADediting_258422(5663958, -), ADediting_258423(5663985, -), ADediting_258424(5664000, -), ADediting_258425(5664036, -), ADediting_258426(5664039, -), ADediting_258427(5664079, -), ADediting_258428(5664089, -), ADediting_258429(5664093, -), ADediting_258430(5664101, -), ADediting_258431(5664114, -), ADediting_258432(5664115, -), ADediting_258433(5664118, -), ADediting_258434(5664119, -), ADediting_258435(5664125, -), ADediting_258436(5664132, -), ADediting_258437(5664138, -), ADediting_258438(5664157, -), ADediting_258439(5664162, -), ADediting_258440(5667269, -), ADediting_258441(5667344, -), ADediting_258442(5667474, -), ADediting_258443(5668223, -), ADediting_258444(5668488, -), ADediting_258445(5668517, -), ADediting_258446(5668526, -), ADediting_258447(5668546, -), ADediting_258448(5668558, -), ADediting_258449(5668561, -), ADediting_258450(5668578, -), ADediting_258451(5668582, -), ADediting_258452(5668587, -), ADediting_258453(5668588, -), ADediting_258454(5668632, -), ADediting_258455(5668653, -), ADediting_258456(5668668, -), ADediting_258457(5668669, -), ADediting_258458(5668696, -), ADediting_258459(5668700, -), ADediting_258460(5668701, -), ADediting_258461(5668722, -), ADediting_258462(5668723, -), ADediting_258463(5669185, -), ADediting_258464(5669186, -), ADediting_258465(5669191, -), ADediting_258466(5669204, -), ADediting_258467(5669217, -), ADediting_258468(5669218, -), ADediting_258469(5669298, -), ADediting_258470(5669312, -), ADediting_258471(5669352, -), ADediting_258472(5669353, -), ADediting_258473(5669741, -), ADediting_258474(5669763, -), ADediting_258475(5669768, -), ADediting_258476(5669780, -), ADediting_258477(5669781, -), ADediting_258478(5669793, -), ADediting_258479(5669806, -), ADediting_258480(5669813, -), ADediting_258481(5669815, -), ADediting_258482(5669863, -), ADediting_258483(5669875, -), ADediting_258484(5669888, -), ADediting_258485(5669889, -), ADediting_258486(5669891, -), ADediting_258487(5669892, -), ADediting_258488(5669893, -), ADediting_258489(5669912, -), ADediting_258490(5669913, -), ADediting_258491(5669918, -), ADediting_258492(5669928, -), ADediting_258493(5669968, -), ADediting_258494(5670283, -), ADediting_258495(5670284, -), ADediting_258496(5670289, -), ADediting_258497(5670291, -), ADediting_258498(5670292, -), ADediting_258499(5670316, -), ADediting_258500(5670342, -), ADediting_258501(5670380, -), ADediting_258502(5670425, -), ADediting_258503(5670441, -), ADediting_258504(5670442, -), ADediting_258505(5671009, -), ADediting_258506(5671023, -), ADediting_258507(5671043, -), ADediting_258508(5671060, -), ADediting_258509(5671104, -), ADediting_258510(5671195, -), ADediting_258511(5672483, -), ADediting_258512(5675089, -), ADediting_258513(5675097, -), ADediting_258514(5681963, -), ADediting_1527079(5663990, -), ADediting_1527080(5664045, -), ADediting_1527081(5667274, -), ADediting_1527082(5667275, -), ADediting_1527083(5667299, -), ADediting_1527084(5667335, -), ADediting_1527085(5667345, -), ADediting_1527086(5681931, -), ADediting_1610183(5669176, -), ADediting_1610184(5672484, -), |
Top |
RNA editing positional annotations for TRIM5 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| ADediting_258428 | chr11_5664089_- | stoploss | ENST00000380027.5 | c.A980G | p.X327W | . | . | . |
| ADediting_258429 | chr11_5664093_- | nonsynonymous SNV | ENST00000380027.5 | c.A976G | p.K326E | 0.043 | 0.801 | 0.15 |
| ADediting_258430 | chr11_5664101_- | nonsynonymous SNV | ENST00000380027.5 | c.A968G | p.Q323R | 0.037 | 0.002 | -0.43 |
| ADediting_258431 | chr11_5664114_- | nonsynonymous SNV | ENST00000380027.5 | c.A955G | p.I319V | 1.0 | 0.0 | 0.41 |
| ADediting_258432 | chr11_5664115_- | synonymous SNV | ENST00000380027.5 | c.A954G | p.A318A | . | . | . |
| ADediting_258433 | chr11_5664118_- | synonymous SNV | ENST00000380027.5 | c.A951G | p.Q317Q | . | . | . |
| ADediting_258434 | chr11_5664119_- | nonsynonymous SNV | ENST00000380027.5 | c.A950G | p.Q317R | 1.0 | 0.0 | 0.06 |
| ADediting_258435 | chr11_5664125_- | nonsynonymous SNV | ENST00000380027.5 | c.A944G | p.Q315R | 0.033 | 0.001 | -0.32 |
| ADediting_258436 | chr11_5664132_- | nonsynonymous SNV | ENST00000380027.5 | c.A937G | p.T313A | 0.196 | 0.003 | 0.08 |
| ADediting_258437 | chr11_5664138_- | nonsynonymous SNV | ENST00000380027.5 | c.A931G | p.T311A | 0.904 | 0.0 | 0.19 |
| ADediting_258438 | chr11_5664157_- | synonymous SNV | ENST00000380027.5 | c.A912G | p.A304A | . | . | . |
| ADediting_258439 | chr11_5664162_- | nonsynonymous SNV | ENST00000380027.5 | c.A907G | p.M303V | 0.605 | 0.0 | 0.02 |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_258419 | chr11_5663943_- | UTR3 |
| ADediting_258420 | chr11_5663945_- | UTR3 |
| ADediting_258421 | chr11_5663957_- | UTR3 |
| ADediting_258422 | chr11_5663958_- | UTR3 |
| ADediting_258423 | chr11_5663985_- | UTR3 |
| ADediting_258424 | chr11_5664000_- | UTR3 |
| ADediting_258425 | chr11_5664036_- | exonic |
| ADediting_258426 | chr11_5664039_- | exonic |
| ADediting_258427 | chr11_5664079_- | exonic |
| ADediting_258428 | chr11_5664089_- | exonic |
| ADediting_258429 | chr11_5664093_- | exonic |
| ADediting_258430 | chr11_5664101_- | exonic |
| ADediting_258431 | chr11_5664114_- | exonic |
| ADediting_258432 | chr11_5664115_- | exonic |
| ADediting_258433 | chr11_5664118_- | exonic |
| ADediting_258434 | chr11_5664119_- | exonic |
| ADediting_258435 | chr11_5664125_- | exonic |
| ADediting_258436 | chr11_5664132_- | exonic |
| ADediting_258437 | chr11_5664138_- | exonic |
| ADediting_258438 | chr11_5664157_- | exonic |
| ADediting_258439 | chr11_5664162_- | exonic |
| ADediting_258440 | chr11_5667269_- | intronic |
| ADediting_258441 | chr11_5667344_- | intronic |
| ADediting_258442 | chr11_5667474_- | intronic |
| ADediting_258443 | chr11_5668223_- | intronic |
| ADediting_258444 | chr11_5668488_- | intronic |
| ADediting_258445 | chr11_5668517_- | intronic |
| ADediting_258446 | chr11_5668526_- | intronic |
| ADediting_258447 | chr11_5668546_- | intronic |
| ADediting_258448 | chr11_5668558_- | intronic |
| ADediting_258449 | chr11_5668561_- | intronic |
| ADediting_258450 | chr11_5668578_- | intronic |
| ADediting_258451 | chr11_5668582_- | intronic |
| ADediting_258452 | chr11_5668587_- | intronic |
| ADediting_258453 | chr11_5668588_- | intronic |
| ADediting_258454 | chr11_5668632_- | intronic |
| ADediting_258455 | chr11_5668653_- | intronic |
| ADediting_258456 | chr11_5668668_- | intronic |
| ADediting_258457 | chr11_5668669_- | intronic |
| ADediting_258458 | chr11_5668696_- | intronic |
| ADediting_258459 | chr11_5668700_- | intronic |
| ADediting_258460 | chr11_5668701_- | intronic |
| ADediting_258461 | chr11_5668722_- | intronic |
| ADediting_258462 | chr11_5668723_- | intronic |
| ADediting_258463 | chr11_5669185_- | intronic |
| ADediting_258464 | chr11_5669186_- | intronic |
| ADediting_258465 | chr11_5669191_- | intronic |
| ADediting_258466 | chr11_5669204_- | intronic |
| ADediting_258467 | chr11_5669217_- | intronic |
| ADediting_258468 | chr11_5669218_- | intronic |
| ADediting_258469 | chr11_5669298_- | intronic |
| ADediting_258470 | chr11_5669312_- | intronic |
| ADediting_258471 | chr11_5669352_- | intronic |
| ADediting_258472 | chr11_5669353_- | intronic |
| ADediting_258473 | chr11_5669741_- | intronic |
| ADediting_258474 | chr11_5669763_- | intronic |
| ADediting_258475 | chr11_5669768_- | intronic |
| ADediting_258476 | chr11_5669780_- | intronic |
| ADediting_258477 | chr11_5669781_- | intronic |
| ADediting_258478 | chr11_5669793_- | intronic |
| ADediting_258479 | chr11_5669806_- | intronic |
| ADediting_258480 | chr11_5669813_- | intronic |
| ADediting_258481 | chr11_5669815_- | intronic |
| ADediting_258482 | chr11_5669863_- | intronic |
| ADediting_258483 | chr11_5669875_- | intronic |
| ADediting_258484 | chr11_5669888_- | intronic |
| ADediting_258485 | chr11_5669889_- | intronic |
| ADediting_258486 | chr11_5669891_- | intronic |
| ADediting_258487 | chr11_5669892_- | intronic |
| ADediting_258488 | chr11_5669893_- | intronic |
| ADediting_258489 | chr11_5669912_- | intronic |
| ADediting_258490 | chr11_5669913_- | intronic |
| ADediting_258491 | chr11_5669918_- | intronic |
| ADediting_258492 | chr11_5669928_- | intronic |
| ADediting_258493 | chr11_5669968_- | intronic |
| ADediting_258494 | chr11_5670283_- | intronic |
| ADediting_258495 | chr11_5670284_- | intronic |
| ADediting_258496 | chr11_5670289_- | intronic |
| ADediting_258497 | chr11_5670291_- | intronic |
| ADediting_258498 | chr11_5670292_- | intronic |
| ADediting_258499 | chr11_5670316_- | intronic |
| ADediting_258500 | chr11_5670342_- | intronic |
| ADediting_258501 | chr11_5670380_- | intronic |
| ADediting_258502 | chr11_5670425_- | intronic |
| ADediting_258503 | chr11_5670441_- | intronic |
| ADediting_258504 | chr11_5670442_- | intronic |
| ADediting_258505 | chr11_5671009_- | intronic |
| ADediting_258506 | chr11_5671023_- | intronic |
| ADediting_258507 | chr11_5671043_- | intronic |
| ADediting_258508 | chr11_5671060_- | intronic |
| ADediting_258509 | chr11_5671104_- | intronic |
| ADediting_258510 | chr11_5671195_- | intronic |
| ADediting_258511 | chr11_5672483_- | intronic |
| ADediting_258512 | chr11_5675089_- | intronic |
| ADediting_258513 | chr11_5675097_- | intronic |
| ADediting_258514 | chr11_5681963_- | intronic |
| ADediting_1527079 | chr11_5663990_- | UTR3 |
| ADediting_1527080 | chr11_5664045_- | exonic |
| ADediting_1527081 | chr11_5667274_- | intronic |
| ADediting_1527082 | chr11_5667275_- | intronic |
| ADediting_1527083 | chr11_5667299_- | intronic |
| ADediting_1527084 | chr11_5667335_- | intronic |
| ADediting_1527085 | chr11_5667345_- | intronic |
| ADediting_1527086 | chr11_5681931_- | intronic |
| ADediting_1610183 | chr11_5669176_- | intronic |
| ADediting_1610184 | chr11_5672484_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_258419 | chr11_5663943_- | SINE | Alu | Name=AluSq10 |
| ADediting_258420 | chr11_5663945_- | SINE | Alu | Name=AluSq10 |
| ADediting_258421 | chr11_5663957_- | SINE | Alu | Name=AluSq10 |
| ADediting_258422 | chr11_5663958_- | SINE | Alu | Name=AluSq10 |
| ADediting_258423 | chr11_5663985_- | SINE | Alu | Name=AluSq10 |
| ADediting_258424 | chr11_5664000_- | SINE | Alu | Name=AluSq10 |
| ADediting_258425 | chr11_5664036_- | SINE | Alu | Name=AluSq10 |
| ADediting_258426 | chr11_5664039_- | SINE | Alu | Name=AluSq10 |
| ADediting_258427 | chr11_5664079_- | SINE | Alu | Name=AluSq10 |
| ADediting_258428 | chr11_5664089_- | SINE | Alu | Name=AluSq10 |
| ADediting_258429 | chr11_5664093_- | SINE | Alu | Name=AluSq10 |
| ADediting_258430 | chr11_5664101_- | SINE | Alu | Name=AluSq10 |
| ADediting_258431 | chr11_5664114_- | SINE | Alu | Name=AluSq10 |
| ADediting_258432 | chr11_5664115_- | SINE | Alu | Name=AluSq10 |
| ADediting_258433 | chr11_5664118_- | SINE | Alu | Name=AluSq10 |
| ADediting_258434 | chr11_5664119_- | SINE | Alu | Name=AluSq10 |
| ADediting_258435 | chr11_5664125_- | SINE | Alu | Name=AluSq10 |
| ADediting_258436 | chr11_5664132_- | SINE | Alu | Name=AluSq10 |
| ADediting_258437 | chr11_5664138_- | SINE | Alu | Name=AluSq10 |
| ADediting_258438 | chr11_5664157_- | SINE | Alu | Name=AluSq10 |
| ADediting_258439 | chr11_5664162_- | SINE | Alu | Name=AluSq10 |
| ADediting_258440 | chr11_5667269_- | SINE | Alu | Name=AluSg |
| ADediting_258441 | chr11_5667344_- | SINE | Alu | Name=AluSg |
| ADediting_258442 | chr11_5667474_- | SINE | Alu | Name=AluSg |
| ADediting_258443 | chr11_5668223_- | SINE | Alu | Name=AluJr |
| ADediting_258444 | chr11_5668488_- | SINE | Alu | Name=AluSx1 |
| ADediting_258445 | chr11_5668517_- | SINE | Alu | Name=AluSx1 |
| ADediting_258446 | chr11_5668526_- | SINE | Alu | Name=AluSx1 |
| ADediting_258447 | chr11_5668546_- | SINE | Alu | Name=AluSx1 |
| ADediting_258448 | chr11_5668558_- | SINE | Alu | Name=AluSx1 |
| ADediting_258449 | chr11_5668561_- | SINE | Alu | Name=AluSx1 |
| ADediting_258450 | chr11_5668578_- | SINE | Alu | Name=AluSx1 |
| ADediting_258451 | chr11_5668582_- | SINE | Alu | Name=AluSx1 |
| ADediting_258452 | chr11_5668587_- | SINE | Alu | Name=AluSx1 |
| ADediting_258453 | chr11_5668588_- | SINE | Alu | Name=AluSx1 |
| ADediting_258454 | chr11_5668632_- | SINE | Alu | Name=AluSx1 |
| ADediting_258455 | chr11_5668653_- | SINE | Alu | Name=AluSx1 |
| ADediting_258456 | chr11_5668668_- | SINE | Alu | Name=AluSx1 |
| ADediting_258457 | chr11_5668669_- | SINE | Alu | Name=AluSx1 |
| ADediting_258458 | chr11_5668696_- | SINE | Alu | Name=AluSx1 |
| ADediting_258459 | chr11_5668700_- | SINE | Alu | Name=AluSx1 |
| ADediting_258460 | chr11_5668701_- | SINE | Alu | Name=AluSx1 |
| ADediting_258461 | chr11_5668722_- | SINE | Alu | Name=AluSx1 |
| ADediting_258462 | chr11_5668723_- | SINE | Alu | Name=AluSx1 |
| ADediting_258463 | chr11_5669185_- | SINE | Alu | Name=AluSp |
| ADediting_258464 | chr11_5669186_- | SINE | Alu | Name=AluSp |
| ADediting_258465 | chr11_5669191_- | SINE | Alu | Name=AluSp |
| ADediting_258466 | chr11_5669204_- | SINE | Alu | Name=AluSp |
| ADediting_258467 | chr11_5669217_- | SINE | Alu | Name=AluSp |
| ADediting_258468 | chr11_5669218_- | SINE | Alu | Name=AluSp |
| ADediting_258469 | chr11_5669298_- | SINE | Alu | Name=AluSp |
| ADediting_258470 | chr11_5669312_- | SINE | Alu | Name=AluSp |
| ADediting_258471 | chr11_5669352_- | SINE | Alu | Name=AluSp |
| ADediting_258472 | chr11_5669353_- | SINE | Alu | Name=AluSp |
| ADediting_258473 | chr11_5669741_- | SINE | Alu | Name=AluSz |
| ADediting_258474 | chr11_5669763_- | SINE | Alu | Name=AluSz |
| ADediting_258475 | chr11_5669768_- | SINE | Alu | Name=AluSz |
| ADediting_258476 | chr11_5669780_- | SINE | Alu | Name=AluSz |
| ADediting_258477 | chr11_5669781_- | SINE | Alu | Name=AluSz |
| ADediting_258478 | chr11_5669793_- | SINE | Alu | Name=AluSz |
| ADediting_258479 | chr11_5669806_- | SINE | Alu | Name=AluSz |
| ADediting_258480 | chr11_5669813_- | SINE | Alu | Name=AluSz |
| ADediting_258481 | chr11_5669815_- | SINE | Alu | Name=AluSz |
| ADediting_258482 | chr11_5669863_- | SINE | Alu | Name=AluSz |
| ADediting_258483 | chr11_5669875_- | SINE | Alu | Name=AluSz |
| ADediting_258484 | chr11_5669888_- | SINE | Alu | Name=AluSz |
| ADediting_258485 | chr11_5669889_- | SINE | Alu | Name=AluSz |
| ADediting_258486 | chr11_5669891_- | SINE | Alu | Name=AluSz |
| ADediting_258487 | chr11_5669892_- | SINE | Alu | Name=AluSz |
| ADediting_258488 | chr11_5669893_- | SINE | Alu | Name=AluSz |
| ADediting_258489 | chr11_5669912_- | SINE | Alu | Name=AluSz |
| ADediting_258490 | chr11_5669913_- | SINE | Alu | Name=AluSz |
| ADediting_258491 | chr11_5669918_- | SINE | Alu | Name=AluSz |
| ADediting_258492 | chr11_5669928_- | SINE | Alu | Name=AluSz |
| ADediting_258493 | chr11_5669968_- | SINE | Alu | Name=AluSz |
| ADediting_258494 | chr11_5670283_- | SINE | Alu | Name=AluY |
| ADediting_258495 | chr11_5670284_- | SINE | Alu | Name=AluY |
| ADediting_258496 | chr11_5670289_- | SINE | Alu | Name=AluY |
| ADediting_258497 | chr11_5670291_- | SINE | Alu | Name=AluY |
| ADediting_258498 | chr11_5670292_- | SINE | Alu | Name=AluY |
| ADediting_258499 | chr11_5670316_- | SINE | Alu | Name=AluY |
| ADediting_258500 | chr11_5670342_- | SINE | Alu | Name=AluY |
| ADediting_258501 | chr11_5670380_- | SINE | Alu | Name=AluY |
| ADediting_258502 | chr11_5670425_- | SINE | Alu | Name=AluY |
| ADediting_258503 | chr11_5670441_- | SINE | Alu | Name=AluY |
| ADediting_258504 | chr11_5670442_- | SINE | Alu | Name=AluY |
| ADediting_258505 | chr11_5671009_- | SINE | Alu | Name=AluJb |
| ADediting_258506 | chr11_5671023_- | SINE | Alu | Name=AluJb |
| ADediting_258507 | chr11_5671043_- | SINE | Alu | Name=AluJb |
| ADediting_258508 | chr11_5671060_- | SINE | Alu | Name=AluJb |
| ADediting_258509 | chr11_5671104_- | SINE | Alu | Name=AluJb |
| ADediting_258510 | chr11_5671195_- | SINE | Alu | Name=AluJb |
| ADediting_258511 | chr11_5672483_- | SINE | Alu | Name=AluSx |
| ADediting_258512 | chr11_5675089_- | SINE | Alu | Name=AluYh3 |
| ADediting_258513 | chr11_5675097_- | SINE | Alu | Name=AluYh3 |
| ADediting_258514 | chr11_5681963_- | SINE | Alu | Name=AluSx4 |
| ADediting_1527079 | chr11_5663990_- | SINE | Alu | Name=AluSq10 |
| ADediting_1527080 | chr11_5664045_- | SINE | Alu | Name=AluSq10 |
| ADediting_1527081 | chr11_5667274_- | SINE | Alu | Name=AluSg |
| ADediting_1527082 | chr11_5667275_- | SINE | Alu | Name=AluSg |
| ADediting_1527083 | chr11_5667299_- | SINE | Alu | Name=AluSg |
| ADediting_1527084 | chr11_5667335_- | SINE | Alu | Name=AluSg |
| ADediting_1527085 | chr11_5667345_- | SINE | Alu | Name=AluSg |
| ADediting_1527086 | chr11_5681931_- | SINE | Alu | Name=AluSx4 |
| ADediting_1610183 | chr11_5669176_- | SINE | Alu | Name=AluSp |
| ADediting_1610184 | chr11_5672484_- | SINE | Alu | Name=AluSx |
Top |
RNA A-to-I editing events in the alternative splicing sites for TRIM5 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for TRIM5 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
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| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for TRIM5 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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Top |
The effects of the RNA editing to the miRNA binding sites for TRIM5 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1527079 | chr11_5663990_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-6089 | chr11 | 5663985 | 5663991 | 7mer-1a | 5663985 | 5664011 | 144 | -34.96 |
| ADediting_1527079 | chr11_5663990_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6089 | chr11 | 5663985 | 5663991 | 7mer-1a | 5663985 | 5664011 | 144 | -34.96 |
| ADediting_1527079 | chr11_5663990_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6089 | chr11 | 5663985 | 5663991 | 7mer-1a | 5663985 | 5664011 | 144 | -34.96 |
| ADediting_1527079 | chr11_5663990_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-6089 | chr11 | 5663985 | 5663991 | 7mer-1a | 5663985 | 5664011 | 144 | -34.96 |
| ADediting_1527080 | chr11_5664045_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-4719 | chr11 | 5664045 | 5664051 | 7mer-m8 | 5664044 | 5664065 | 147 | -10.33 |
| ADediting_1527080 | chr11_5664045_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-570-3p | chr11 | 5664039 | 5664046 | 8mer-1a | 5664039 | 5664060 | 154 | -8.48 |
| ADediting_1527080 | chr11_5664045_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-4719 | chr11 | 5664045 | 5664051 | 7mer-m8 | 5664044 | 5664065 | 147 | -10.33 |
| ADediting_1527080 | chr11_5664045_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-570-3p | chr11 | 5664039 | 5664046 | 8mer-1a | 5664039 | 5664060 | 154 | -8.48 |
| ADediting_1527080 | chr11_5664045_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-4719 | chr11 | 5664045 | 5664051 | 7mer-m8 | 5664044 | 5664065 | 147 | -10.33 |
| ADediting_1527080 | chr11_5664045_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-570-3p | chr11 | 5664039 | 5664046 | 8mer-1a | 5664039 | 5664060 | 154 | -8.48 |
| ADediting_258421 | chr11_5663957_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-3189-3p | chr11 | 5663956 | 5663962 | 7mer-m8 | 5663955 | 5663978 | 153 | -24.71 |
| ADediting_258421 | chr11_5663957_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-6813-3p | chr11 | 5663955 | 5663961 | 7mer-m8 | 5663954 | 5663974 | 140 | -12.55 |
| ADediting_258421 | chr11_5663957_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-3189-3p | chr11 | 5663956 | 5663962 | 7mer-m8 | 5663955 | 5663978 | 153 | -24.71 |
| ADediting_258421 | chr11_5663957_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6813-3p | chr11 | 5663955 | 5663961 | 7mer-m8 | 5663954 | 5663974 | 140 | -12.55 |
| ADediting_258421 | chr11_5663957_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-3189-3p | chr11 | 5663956 | 5663962 | 7mer-m8 | 5663955 | 5663978 | 153 | -24.71 |
| ADediting_258421 | chr11_5663957_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6813-3p | chr11 | 5663955 | 5663961 | 7mer-m8 | 5663954 | 5663974 | 140 | -12.55 |
| ADediting_258421 | chr11_5663957_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-3189-3p | chr11 | 5663956 | 5663962 | 7mer-m8 | 5663955 | 5663978 | 153 | -24.71 |
| ADediting_258421 | chr11_5663957_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-6813-3p | chr11 | 5663955 | 5663961 | 7mer-m8 | 5663954 | 5663974 | 140 | -12.55 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-326 | chr11 | 5663956 | 5663962 | 7mer-m8 | 5663955 | 5663974 | 140 | -15.12 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-330-5p | chr11 | 5663956 | 5663962 | 7mer-m8 | 5663955 | 5663976 | 140 | -21.22 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-4314 | chr11 | 5663957 | 5663963 | 7mer-m8 | 5663956 | 5663973 | 140 | -21.17 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-514a-5p | chr11 | 5663955 | 5663961 | 7mer-m8 | 5663954 | 5663977 | 146 | -20.07 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-326 | chr11 | 5663956 | 5663962 | 7mer-m8 | 5663955 | 5663974 | 140 | -15.12 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-330-5p | chr11 | 5663956 | 5663962 | 7mer-m8 | 5663955 | 5663976 | 140 | -21.22 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-4314 | chr11 | 5663957 | 5663963 | 7mer-m8 | 5663956 | 5663973 | 140 | -21.17 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-514a-5p | chr11 | 5663955 | 5663961 | 7mer-m8 | 5663954 | 5663977 | 146 | -20.07 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-326 | chr11 | 5663956 | 5663962 | 7mer-m8 | 5663955 | 5663974 | 140 | -15.12 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-330-5p | chr11 | 5663956 | 5663962 | 7mer-m8 | 5663955 | 5663976 | 140 | -21.22 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-4314 | chr11 | 5663957 | 5663963 | 7mer-m8 | 5663956 | 5663973 | 140 | -21.17 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-514a-5p | chr11 | 5663955 | 5663961 | 7mer-m8 | 5663954 | 5663977 | 146 | -20.07 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-326 | chr11 | 5663956 | 5663962 | 7mer-m8 | 5663955 | 5663974 | 140 | -15.12 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-330-5p | chr11 | 5663956 | 5663962 | 7mer-m8 | 5663955 | 5663976 | 140 | -21.22 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-4314 | chr11 | 5663957 | 5663963 | 7mer-m8 | 5663956 | 5663973 | 140 | -21.17 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-514a-5p | chr11 | 5663955 | 5663961 | 7mer-m8 | 5663954 | 5663977 | 146 | -20.07 |
| ADediting_258424 | chr11_5664000_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-3180-5p | chr11 | 5663997 | 5664003 | 7mer-m8 | 5663996 | 5664021 | 166 | -24.25 |
| ADediting_258424 | chr11_5664000_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-3180-5p | chr11 | 5663997 | 5664003 | 7mer-m8 | 5663996 | 5664021 | 166 | -24.25 |
| ADediting_258424 | chr11_5664000_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-3180-5p | chr11 | 5663997 | 5664003 | 7mer-m8 | 5663996 | 5664021 | 166 | -24.25 |
| ADediting_258424 | chr11_5664000_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-3180-5p | chr11 | 5663997 | 5664003 | 7mer-m8 | 5663996 | 5664021 | 166 | -24.25 |
| ADediting_258425 | chr11_5664036_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-181a-2-3p | chr11 | 5664034 | 5664041 | 8mer-1a | 5664034 | 5664056 | 147 | -11.24 |
| ADediting_258425 | chr11_5664036_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-6509-3p | chr11 | 5664034 | 5664040 | 7mer-m8 | 5664033 | 5664053 | 154 | -14.47 |
| ADediting_258425 | chr11_5664036_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-181a-2-3p | chr11 | 5664034 | 5664041 | 8mer-1a | 5664034 | 5664056 | 147 | -11.24 |
| ADediting_258425 | chr11_5664036_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6509-3p | chr11 | 5664034 | 5664040 | 7mer-m8 | 5664033 | 5664053 | 154 | -14.47 |
| ADediting_258425 | chr11_5664036_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-181a-2-3p | chr11 | 5664034 | 5664041 | 8mer-1a | 5664034 | 5664056 | 147 | -11.24 |
| ADediting_258425 | chr11_5664036_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6509-3p | chr11 | 5664034 | 5664040 | 7mer-m8 | 5664033 | 5664053 | 154 | -14.47 |
| ADediting_258428 | chr11_5664089_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-3614-5p | chr11 | 5664089 | 5664095 | 7mer-m8 | 5664088 | 5664111 | 152 | -25.27 |
| ADediting_258428 | chr11_5664089_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-4691-3p | chr11 | 5664085 | 5664091 | 7mer-m8 | 5664084 | 5664111 | 150 | -26.36 |
| ADediting_258428 | chr11_5664089_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-3614-5p | chr11 | 5664089 | 5664095 | 7mer-m8 | 5664088 | 5664111 | 152 | -25.27 |
| ADediting_258428 | chr11_5664089_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-4691-3p | chr11 | 5664085 | 5664091 | 7mer-m8 | 5664084 | 5664111 | 150 | -26.36 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6771-5p | chr11 | 5664092 | 5664098 | 7mer-m8 | 5664091 | 5664110 | 160 | -34.33 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6771-5p | chr11 | 5664092 | 5664098 | 7mer-m8 | 5664091 | 5664110 | 160 | -34.33 |
| ADediting_258430 | chr11_5664101_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6089 | chr11 | 5664096 | 5664102 | 7mer-m8 | 5664095 | 5664118 | 164 | -37.08 |
| ADediting_258430 | chr11_5664101_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6089 | chr11 | 5664096 | 5664102 | 7mer-m8 | 5664095 | 5664118 | 164 | -37.08 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-146a-5p | chr11 | 5664109 | 5664115 | 7mer-m8 | 5664108 | 5664128 | 147 | -15.24 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-146b-5p | chr11 | 5664109 | 5664115 | 7mer-m8 | 5664108 | 5664134 | 151 | -15.39 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-7153-5p | chr11 | 5664109 | 5664115 | 7mer-m8 | 5664108 | 5664131 | 152 | -20.52 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-146a-5p | chr11 | 5664109 | 5664115 | 7mer-m8 | 5664108 | 5664128 | 147 | -15.24 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-146b-5p | chr11 | 5664109 | 5664115 | 7mer-m8 | 5664108 | 5664134 | 151 | -15.39 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-7153-5p | chr11 | 5664109 | 5664115 | 7mer-m8 | 5664108 | 5664131 | 152 | -20.52 |
| ADediting_258433 | chr11_5664118_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-3140-5p | chr11 | 5664117 | 5664123 | 7mer-m8 | 5664116 | 5664136 | 141 | -10.08 |
| ADediting_258433 | chr11_5664118_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-5187-3p | chr11 | 5664118 | 5664124 | 7mer-m8 | 5664117 | 5664137 | 140 | -8.85 |
| ADediting_258433 | chr11_5664118_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-3140-5p | chr11 | 5664117 | 5664123 | 7mer-m8 | 5664116 | 5664136 | 141 | -10.08 |
| ADediting_258433 | chr11_5664118_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-5187-3p | chr11 | 5664118 | 5664124 | 7mer-m8 | 5664117 | 5664137 | 140 | -8.85 |
| ADediting_258436 | chr11_5664132_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-25-5p | chr11 | 5664130 | 5664136 | 7mer-m8 | 5664129 | 5664148 | 143 | -18.5 |
| ADediting_258436 | chr11_5664132_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-658 | chr11 | 5664131 | 5664137 | 7mer-m8 | 5664130 | 5664155 | 153 | -31.71 |
| ADediting_258436 | chr11_5664132_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-25-5p | chr11 | 5664130 | 5664136 | 7mer-m8 | 5664129 | 5664148 | 143 | -18.5 |
| ADediting_258436 | chr11_5664132_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-658 | chr11 | 5664131 | 5664137 | 7mer-m8 | 5664130 | 5664155 | 153 | -31.71 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-17-3p | chr11 | 5664138 | 5664144 | 7mer-m8 | 5664137 | 5664159 | 157 | -18.6 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-485-5p | chr11 | 5664134 | 5664140 | 7mer-m8 | 5664133 | 5664153 | 153 | -18 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6884-5p | chr11 | 5664134 | 5664140 | 7mer-m8 | 5664133 | 5664156 | 146 | -21.26 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-17-3p | chr11 | 5664138 | 5664144 | 7mer-m8 | 5664137 | 5664159 | 157 | -18.6 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-485-5p | chr11 | 5664134 | 5664140 | 7mer-m8 | 5664133 | 5664153 | 153 | -18 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6884-5p | chr11 | 5664134 | 5664140 | 7mer-m8 | 5664133 | 5664156 | 146 | -21.26 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-324-3p | chr11 | 5664159 | 5664165 | 7mer-m8 | 5664158 | 5664180 | 148 | -24.73 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-4252 | chr11 | 5664157 | 5664164 | 8mer-1a | 5664157 | 5664177 | 149 | -22.82 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-4793-3p | chr11 | 5664162 | 5664168 | 7mer-m8 | 5664161 | 5664183 | 149 | -19.3 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-324-3p | chr11 | 5664159 | 5664165 | 7mer-m8 | 5664158 | 5664180 | 148 | -24.73 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-4252 | chr11 | 5664157 | 5664164 | 8mer-1a | 5664157 | 5664177 | 149 | -22.82 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-4793-3p | chr11 | 5664162 | 5664168 | 7mer-m8 | 5664161 | 5664183 | 149 | -19.3 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1527079 | chr11_5663990_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-10393-3p | chr11 | 5663988 | 5663994 | 7mer-m8 | 5663987 | 5664011 | 142 | -12.74 |
| ADediting_1527079 | chr11_5663990_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-6801-5p | chr11 | 5663988 | 5663994 | 7mer-m8 | 5663987 | 5664009 | 150 | -20.54 |
| ADediting_1527079 | chr11_5663990_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-10393-3p | chr11 | 5663988 | 5663994 | 7mer-m8 | 5663987 | 5664011 | 142 | -12.74 |
| ADediting_1527079 | chr11_5663990_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6801-5p | chr11 | 5663988 | 5663994 | 7mer-m8 | 5663987 | 5664009 | 150 | -20.54 |
| ADediting_1527079 | chr11_5663990_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-10393-3p | chr11 | 5663988 | 5663994 | 7mer-m8 | 5663987 | 5664011 | 142 | -12.74 |
| ADediting_1527079 | chr11_5663990_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6801-5p | chr11 | 5663988 | 5663994 | 7mer-m8 | 5663987 | 5664009 | 150 | -20.54 |
| ADediting_1527079 | chr11_5663990_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-10393-3p | chr11 | 5663988 | 5663994 | 7mer-m8 | 5663987 | 5664011 | 142 | -12.74 |
| ADediting_1527079 | chr11_5663990_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-6801-5p | chr11 | 5663988 | 5663994 | 7mer-m8 | 5663987 | 5664009 | 150 | -20.54 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-887-5p | chr11 | 5663957 | 5663964 | 8mer-1a | 5663957 | 5663977 | 147 | -13.82 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-887-5p | chr11 | 5663957 | 5663964 | 8mer-1a | 5663957 | 5663977 | 147 | -13.82 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-887-5p | chr11 | 5663957 | 5663964 | 8mer-1a | 5663957 | 5663977 | 147 | -13.82 |
| ADediting_258422 | chr11_5663958_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-887-5p | chr11 | 5663957 | 5663964 | 8mer-1a | 5663957 | 5663977 | 147 | -13.82 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-3622a-3p | chr11 | 5663980 | 5663987 | 8mer-1a | 5663980 | 5664001 | 145 | -13.55 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-3622b-3p | chr11 | 5663980 | 5663987 | 8mer-1a | 5663980 | 5664000 | 152 | -17.6 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-544b | chr11 | 5663983 | 5663989 | 7mer-m8 | 5663982 | 5664002 | 154 | -19.96 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000380027.5 | TRIM5-201 | hsa-miR-7162-3p | chr11 | 5663984 | 5663990 | 7mer-m8 | 5663983 | 5664002 | 142 | -16.12 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-3622a-3p | chr11 | 5663980 | 5663987 | 8mer-1a | 5663980 | 5664001 | 145 | -13.55 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-3622b-3p | chr11 | 5663980 | 5663987 | 8mer-1a | 5663980 | 5664000 | 152 | -17.6 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-544b | chr11 | 5663983 | 5663989 | 7mer-m8 | 5663982 | 5664002 | 154 | -19.96 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-7162-3p | chr11 | 5663984 | 5663990 | 7mer-m8 | 5663983 | 5664002 | 142 | -16.12 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-3622a-3p | chr11 | 5663980 | 5663987 | 8mer-1a | 5663980 | 5664001 | 145 | -13.55 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-3622b-3p | chr11 | 5663980 | 5663987 | 8mer-1a | 5663980 | 5664000 | 152 | -17.6 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-544b | chr11 | 5663983 | 5663989 | 7mer-m8 | 5663982 | 5664002 | 154 | -19.96 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-7162-3p | chr11 | 5663984 | 5663990 | 7mer-m8 | 5663983 | 5664002 | 142 | -16.12 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-3622a-3p | chr11 | 5663980 | 5663987 | 8mer-1a | 5663980 | 5664001 | 145 | -13.55 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-3622b-3p | chr11 | 5663980 | 5663987 | 8mer-1a | 5663980 | 5664000 | 152 | -17.6 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-544b | chr11 | 5663983 | 5663989 | 7mer-m8 | 5663982 | 5664002 | 154 | -19.96 |
| ADediting_258423 | chr11_5663985_- | ENSG00000132256.19 | ENST00000438025.5 | TRIM5-207 | hsa-miR-7162-3p | chr11 | 5663984 | 5663990 | 7mer-m8 | 5663983 | 5664002 | 142 | -16.12 |
| ADediting_258428 | chr11_5664089_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-5690 | chr11 | 5664085 | 5664091 | 7mer-m8 | 5664084 | 5664104 | 145 | -16.74 |
| ADediting_258428 | chr11_5664089_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-5690 | chr11 | 5664085 | 5664091 | 7mer-m8 | 5664084 | 5664104 | 145 | -16.74 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-12126 | chr11 | 5664089 | 5664096 | 8mer-1a | 5664089 | 5664112 | 147 | -13.23 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-30b-3p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664113 | 151 | -15.38 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-3689a-3p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664112 | 147 | -18.72 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-3689b-3p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664112 | 147 | -17.55 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-3689c | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664112 | 147 | -17.55 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6779-5p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664110 | 148 | -22.58 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6780a-5p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664115 | 152 | -25.37 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-887-5p | chr11 | 5664092 | 5664098 | 7mer-m8 | 5664091 | 5664110 | 143 | -19.73 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-12126 | chr11 | 5664089 | 5664096 | 8mer-1a | 5664089 | 5664112 | 147 | -13.23 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-30b-3p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664113 | 151 | -15.38 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-3689a-3p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664112 | 147 | -18.72 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-3689b-3p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664112 | 147 | -17.55 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-3689c | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664112 | 147 | -17.55 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6779-5p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664110 | 148 | -22.58 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6780a-5p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664115 | 152 | -25.37 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-887-5p | chr11 | 5664092 | 5664098 | 7mer-m8 | 5664091 | 5664110 | 143 | -19.73 |
| ADediting_258430 | chr11_5664101_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-4478 | chr11 | 5664097 | 5664103 | 7mer-m8 | 5664096 | 5664111 | 149 | -25.05 |
| ADediting_258430 | chr11_5664101_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-4649-3p | chr11 | 5664100 | 5664106 | 7mer-m8 | 5664099 | 5664119 | 140 | -14.11 |
| ADediting_258430 | chr11_5664101_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-7160-5p | chr11 | 5664099 | 5664105 | 7mer-m8 | 5664098 | 5664118 | 147 | -20.02 |
| ADediting_258430 | chr11_5664101_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-4478 | chr11 | 5664097 | 5664103 | 7mer-m8 | 5664096 | 5664111 | 149 | -25.05 |
| ADediting_258430 | chr11_5664101_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-4649-3p | chr11 | 5664100 | 5664106 | 7mer-m8 | 5664099 | 5664119 | 140 | -14.11 |
| ADediting_258430 | chr11_5664101_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-7160-5p | chr11 | 5664099 | 5664105 | 7mer-m8 | 5664098 | 5664118 | 147 | -20.02 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-219b-3p | chr11 | 5664111 | 5664117 | 7mer-m8 | 5664110 | 5664130 | 148 | -12.03 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-302f | chr11 | 5664112 | 5664118 | 7mer-m8 | 5664111 | 5664127 | 151 | -6.74 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-219b-3p | chr11 | 5664111 | 5664117 | 7mer-m8 | 5664110 | 5664130 | 148 | -12.03 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-302f | chr11 | 5664112 | 5664118 | 7mer-m8 | 5664111 | 5664127 | 151 | -6.74 |
| ADediting_258432 | chr11_5664115_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-219b-3p | chr11 | 5664111 | 5664117 | 7mer-m8 | 5664110 | 5664130 | 148 | -12.03 |
| ADediting_258432 | chr11_5664115_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-302f | chr11 | 5664112 | 5664118 | 7mer-m8 | 5664111 | 5664127 | 151 | -6.74 |
| ADediting_258432 | chr11_5664115_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-219b-3p | chr11 | 5664111 | 5664117 | 7mer-m8 | 5664110 | 5664130 | 148 | -12.03 |
| ADediting_258432 | chr11_5664115_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-302f | chr11 | 5664112 | 5664118 | 7mer-m8 | 5664111 | 5664127 | 151 | -6.74 |
| ADediting_258435 | chr11_5664125_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-3200-5p | chr11 | 5664122 | 5664128 | 7mer-m8 | 5664121 | 5664141 | 150 | -19.54 |
| ADediting_258435 | chr11_5664125_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6761-5p | chr11 | 5664123 | 5664130 | 8mer-1a | 5664123 | 5664141 | 141 | -16.91 |
| ADediting_258435 | chr11_5664125_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-3200-5p | chr11 | 5664122 | 5664128 | 7mer-m8 | 5664121 | 5664141 | 150 | -19.54 |
| ADediting_258435 | chr11_5664125_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6761-5p | chr11 | 5664123 | 5664130 | 8mer-1a | 5664123 | 5664141 | 141 | -16.91 |
| ADediting_258436 | chr11_5664132_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6880-5p | chr11 | 5664130 | 5664136 | 7mer-m8 | 5664129 | 5664150 | 152 | -22.51 |
| ADediting_258436 | chr11_5664132_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-7847-3p | chr11 | 5664131 | 5664137 | 7mer-m8 | 5664130 | 5664150 | 150 | -17.2 |
| ADediting_258436 | chr11_5664132_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6880-5p | chr11 | 5664130 | 5664136 | 7mer-m8 | 5664129 | 5664150 | 152 | -22.51 |
| ADediting_258436 | chr11_5664132_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-7847-3p | chr11 | 5664131 | 5664137 | 7mer-m8 | 5664130 | 5664150 | 150 | -17.2 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-377-5p | chr11 | 5664134 | 5664140 | 7mer-m8 | 5664133 | 5664150 | 151 | -19.67 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6086 | chr11 | 5664134 | 5664140 | 7mer-m8 | 5664133 | 5664152 | 146 | -22.04 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-6516-5p | chr11 | 5664138 | 5664144 | 7mer-m8 | 5664137 | 5664162 | 155 | -16.63 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-377-5p | chr11 | 5664134 | 5664140 | 7mer-m8 | 5664133 | 5664150 | 151 | -19.67 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6086 | chr11 | 5664134 | 5664140 | 7mer-m8 | 5664133 | 5664152 | 146 | -22.04 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-6516-5p | chr11 | 5664138 | 5664144 | 7mer-m8 | 5664137 | 5664162 | 155 | -16.63 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-32-5p | chr11 | 5664161 | 5664167 | 7mer-m8 | 5664160 | 5664181 | 144 | -12.53 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-363-3p | chr11 | 5664161 | 5664167 | 7mer-m8 | 5664160 | 5664181 | 147 | -16.12 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-92a-3p | chr11 | 5664161 | 5664167 | 7mer-m8 | 5664160 | 5664177 | 155 | -26.92 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-32-5p | chr11 | 5664161 | 5664167 | 7mer-m8 | 5664160 | 5664181 | 144 | -12.53 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-363-3p | chr11 | 5664161 | 5664167 | 7mer-m8 | 5664160 | 5664181 | 147 | -16.12 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-92a-3p | chr11 | 5664161 | 5664167 | 7mer-m8 | 5664160 | 5664177 | 155 | -26.92 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_258428 | chr11_5664089_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-3614-5p | chr11 | 5664089 | 5664095 | 7mer-m8 | 5664088 | 5664111 | 152 | -25.27 |
| ADediting_258428 | chr11_5664089_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-4691-3p | chr11 | 5664085 | 5664091 | 7mer-m8 | 5664084 | 5664111 | 150 | -26.36 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-6771-5p | chr11 | 5664092 | 5664098 | 7mer-m8 | 5664091 | 5664110 | 160 | -34.33 |
| ADediting_258430 | chr11_5664101_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-6089 | chr11 | 5664096 | 5664102 | 7mer-m8 | 5664095 | 5664118 | 164 | -37.08 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-146a-5p | chr11 | 5664109 | 5664115 | 7mer-m8 | 5664108 | 5664128 | 147 | -15.24 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-146b-5p | chr11 | 5664109 | 5664115 | 7mer-m8 | 5664108 | 5664134 | 151 | -15.39 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-7153-5p | chr11 | 5664109 | 5664115 | 7mer-m8 | 5664108 | 5664131 | 152 | -20.52 |
| ADediting_258433 | chr11_5664118_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-3140-5p | chr11 | 5664117 | 5664123 | 7mer-m8 | 5664116 | 5664136 | 141 | -10.08 |
| ADediting_258433 | chr11_5664118_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-5187-3p | chr11 | 5664118 | 5664124 | 7mer-m8 | 5664117 | 5664137 | 140 | -8.85 |
| ADediting_258436 | chr11_5664132_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-25-5p | chr11 | 5664130 | 5664136 | 7mer-m8 | 5664129 | 5664148 | 143 | -18.5 |
| ADediting_258436 | chr11_5664132_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-658 | chr11 | 5664131 | 5664137 | 7mer-m8 | 5664130 | 5664155 | 153 | -31.71 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-17-3p | chr11 | 5664138 | 5664144 | 7mer-m8 | 5664137 | 5664159 | 157 | -18.6 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-485-5p | chr11 | 5664134 | 5664140 | 7mer-m8 | 5664133 | 5664153 | 153 | -18 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-6884-5p | chr11 | 5664134 | 5664140 | 7mer-m8 | 5664133 | 5664156 | 146 | -21.26 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-324-3p | chr11 | 5664159 | 5664165 | 7mer-m8 | 5664158 | 5665177 | 149 | -24.73 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-4252 | chr11 | 5664157 | 5664164 | 8mer-1a | 5664157 | 5665172 | 151 | -26.15 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-4793-3p | chr11 | 5664162 | 5664168 | 7mer-m8 | 5664161 | 5665177 | 147 | -19.04 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_258428 | chr11_5664089_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-5690 | chr11 | 5664085 | 5664091 | 7mer-m8 | 5664084 | 5664104 | 145 | -16.74 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-12126 | chr11 | 5664089 | 5664096 | 8mer-1a | 5664089 | 5664112 | 147 | -13.23 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-30b-3p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664113 | 151 | -15.38 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-3689a-3p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664112 | 147 | -18.72 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-3689b-3p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664112 | 147 | -17.55 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-3689c | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664112 | 147 | -17.55 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-6779-5p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664110 | 148 | -22.58 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-6780a-5p | chr11 | 5664092 | 5664099 | 8mer-1a | 5664092 | 5664115 | 152 | -25.37 |
| ADediting_258429 | chr11_5664093_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-887-5p | chr11 | 5664092 | 5664098 | 7mer-m8 | 5664091 | 5664110 | 143 | -19.73 |
| ADediting_258430 | chr11_5664101_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-4478 | chr11 | 5664097 | 5664103 | 7mer-m8 | 5664096 | 5664111 | 149 | -25.05 |
| ADediting_258430 | chr11_5664101_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-4649-3p | chr11 | 5664100 | 5664106 | 7mer-m8 | 5664099 | 5664119 | 140 | -14.11 |
| ADediting_258430 | chr11_5664101_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-7160-5p | chr11 | 5664099 | 5664105 | 7mer-m8 | 5664098 | 5664118 | 147 | -20.02 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-219b-3p | chr11 | 5664111 | 5664117 | 7mer-m8 | 5664110 | 5664130 | 148 | -12.03 |
| ADediting_258431 | chr11_5664114_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-302f | chr11 | 5664112 | 5664118 | 7mer-m8 | 5664111 | 5664127 | 151 | -6.74 |
| ADediting_258432 | chr11_5664115_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-219b-3p | chr11 | 5664111 | 5664117 | 7mer-m8 | 5664110 | 5664130 | 148 | -12.03 |
| ADediting_258432 | chr11_5664115_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-302f | chr11 | 5664112 | 5664118 | 7mer-m8 | 5664111 | 5664127 | 151 | -6.74 |
| ADediting_258435 | chr11_5664125_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-3200-5p | chr11 | 5664122 | 5664128 | 7mer-m8 | 5664121 | 5664141 | 150 | -19.54 |
| ADediting_258435 | chr11_5664125_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-6761-5p | chr11 | 5664123 | 5664130 | 8mer-1a | 5664123 | 5664141 | 141 | -16.91 |
| ADediting_258436 | chr11_5664132_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-6880-5p | chr11 | 5664130 | 5664136 | 7mer-m8 | 5664129 | 5664150 | 152 | -22.51 |
| ADediting_258436 | chr11_5664132_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-7847-3p | chr11 | 5664131 | 5664137 | 7mer-m8 | 5664130 | 5664150 | 150 | -17.2 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-377-5p | chr11 | 5664134 | 5664140 | 7mer-m8 | 5664133 | 5664150 | 151 | -19.67 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-6086 | chr11 | 5664134 | 5664140 | 7mer-m8 | 5664133 | 5664152 | 146 | -22.04 |
| ADediting_258437 | chr11_5664138_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-6516-5p | chr11 | 5664138 | 5664144 | 7mer-m8 | 5664137 | 5664162 | 155 | -16.63 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-25-3p | chr11 | 5664161 | 5664167 | 7mer-m8 | 5664160 | 5665178 | 150 | -21.39 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-32-5p | chr11 | 5664161 | 5664167 | 7mer-m8 | 5664160 | 5665176 | 144 | -13.6 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-363-3p | chr11 | 5664161 | 5664167 | 7mer-m8 | 5664160 | 5665176 | 152 | -13.99 |
| ADediting_258439 | chr11_5664162_- | ENSG00000132256.19 | ENST00000483835.5 | TRIM5-209 | hsa-miR-92a-3p | chr11 | 5664161 | 5664167 | 7mer-m8 | 5664160 | 5665178 | 154 | -23.27 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000132256.19 | ENST00000396847.7 | TRIM5-203 | hsa-miR-381-3p | chr11 | 5664871 | 5664877 | 7mer-m8 | 5664870 | 5664893 | 141 | -10.38 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_843620 | chr2_207754818_+ | ENSG00000132256.19 | ENST00000380034.8 | TRIM5-202 | hsa-miR-4775 | chr11 | 5663254 | 5663260 | 7mer-m8 | 5663253 | 5663275 | 147 | -4.5 |
| Differentially expressed gene-miRNA network |
| Differentially expressed mRNA-miRNA network |
 |
Top |
The effects of the RNA editing to the stability of the RNA structures for TRIM5 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000380034.8 | protein_coding |  |  |
| ENST00000396847.7 | protein_coding |  |  |
| ENST00000438025.5 | protein_coding |  |  |
| ENST00000380027.5 | protein_coding |  |  |
| ENST00000483835.5 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_258419 | ENST00000380034.8 | chr11_5663943_- | 2616 | -934.70 | -932.10 | -968.50 |
| ADediting_258420 | ENST00000380034.8 | chr11_5663945_- | 2614 | -932.90 | -932.10 | -968.50 |
| ADediting_258421 | ENST00000380034.8 | chr11_5663957_- | 2602 | -933.70 | -932.10 | -968.50 |
| ADediting_258422 | ENST00000380034.8 | chr11_5663958_- | 2601 | -934.80 | -932.10 | -968.50 |
| ADediting_258423 | ENST00000380034.8 | chr11_5663985_- | 2574 | -934.30 | -932.10 | -968.50 |
| ADediting_1527079 | ENST00000380034.8 | chr11_5663990_- | 2569 | -935.00 | -932.10 | -968.50 |
| ADediting_258424 | ENST00000380034.8 | chr11_5664000_- | 2559 | -932.50 | -932.10 | -968.50 |
| ADediting_258425 | ENST00000380034.8 | chr11_5664036_- | 2523 | -934.90 | -932.10 | -968.50 |
| ADediting_258426 | ENST00000380034.8 | chr11_5664039_- | 2520 | -934.20 | -932.10 | -968.50 |
| ADediting_1527080 | ENST00000380034.8 | chr11_5664045_- | 2514 | -932.90 | -932.10 | -968.50 |
| ADediting_258427 | ENST00000380034.8 | chr11_5664079_- | 2480 | -935.80 | -932.10 | -968.50 |
| ADediting_258428 | ENST00000380034.8 | chr11_5664089_- | 2470 | -935.90 | -932.10 | -968.50 |
| ADediting_258429 | ENST00000380034.8 | chr11_5664093_- | 2466 | -933.90 | -932.10 | -968.50 |
| ADediting_258430 | ENST00000380034.8 | chr11_5664101_- | 2458 | -932.50 | -932.10 | -968.50 |
| ADediting_258431 | ENST00000380034.8 | chr11_5664114_- | 2445 | -934.50 | -932.10 | -968.50 |
| ADediting_258432 | ENST00000380034.8 | chr11_5664115_- | 2444 | -934.60 | -932.10 | -968.50 |
| ADediting_258433 | ENST00000380034.8 | chr11_5664118_- | 2441 | -935.30 | -932.10 | -968.50 |
| ADediting_258434 | ENST00000380034.8 | chr11_5664119_- | 2440 | -934.20 | -932.10 | -968.50 |
| ADediting_258435 | ENST00000380034.8 | chr11_5664125_- | 2434 | -933.60 | -932.10 | -968.50 |
| ADediting_258436 | ENST00000380034.8 | chr11_5664132_- | 2427 | -932.90 | -932.10 | -968.50 |
| ADediting_258437 | ENST00000380034.8 | chr11_5664138_- | 2421 | -933.80 | -932.10 | -968.50 |
| ADediting_258438 | ENST00000380034.8 | chr11_5664157_- | 2402 | -932.30 | -932.10 | -968.50 |
| ADediting_258439 | ENST00000380034.8 | chr11_5664162_- | 2397 | -938.30 | -932.10 | -968.50 |
| ADediting_258419 | ENST00000396847.7 | chr11_5663943_- | 2844 | -894.20 | -892.70 | -926.70 |
| ADediting_258420 | ENST00000396847.7 | chr11_5663945_- | 2842 | -893.20 | -892.70 | -926.70 |
| ADediting_258421 | ENST00000396847.7 | chr11_5663957_- | 2830 | -893.90 | -892.70 | -926.70 |
| ADediting_258422 | ENST00000396847.7 | chr11_5663958_- | 2829 | -895.40 | -892.70 | -926.70 |
| ADediting_258423 | ENST00000396847.7 | chr11_5663985_- | 2802 | -895.90 | -892.70 | -926.70 |
| ADediting_1527079 | ENST00000396847.7 | chr11_5663990_- | 2797 | -895.60 | -892.70 | -926.70 |
| ADediting_258424 | ENST00000396847.7 | chr11_5664000_- | 2787 | -892.40 | -892.70 | -926.70 |
| ADediting_258425 | ENST00000396847.7 | chr11_5664036_- | 2751 | -893.10 | -892.70 | -926.70 |
| ADediting_258426 | ENST00000396847.7 | chr11_5664039_- | 2748 | -892.40 | -892.70 | -926.70 |
| ADediting_1527080 | ENST00000396847.7 | chr11_5664045_- | 2742 | -892.40 | -892.70 | -926.70 |
| ADediting_258427 | ENST00000396847.7 | chr11_5664079_- | 2708 | -892.70 | -892.70 | -926.70 |
| ADediting_258428 | ENST00000396847.7 | chr11_5664089_- | 2698 | -894.10 | -892.70 | -926.70 |
| ADediting_258429 | ENST00000396847.7 | chr11_5664093_- | 2694 | -893.10 | -892.70 | -926.70 |
| ADediting_258430 | ENST00000396847.7 | chr11_5664101_- | 2686 | -892.00 | -892.70 | -926.70 |
| ADediting_258431 | ENST00000396847.7 | chr11_5664114_- | 2673 | -892.70 | -892.70 | -926.70 |
| ADediting_258432 | ENST00000396847.7 | chr11_5664115_- | 2672 | -892.80 | -892.70 | -926.70 |
| ADediting_258433 | ENST00000396847.7 | chr11_5664118_- | 2669 | -893.50 | -892.70 | -926.70 |
| ADediting_258434 | ENST00000396847.7 | chr11_5664119_- | 2668 | -895.80 | -892.70 | -926.70 |
| ADediting_258435 | ENST00000396847.7 | chr11_5664125_- | 2662 | -895.20 | -892.70 | -926.70 |
| ADediting_258436 | ENST00000396847.7 | chr11_5664132_- | 2655 | -894.20 | -892.70 | -926.70 |
| ADediting_258437 | ENST00000396847.7 | chr11_5664138_- | 2649 | -892.70 | -892.70 | -926.70 |
| ADediting_258438 | ENST00000396847.7 | chr11_5664157_- | 2630 | -892.90 | -892.70 | -926.70 |
| ADediting_258439 | ENST00000396847.7 | chr11_5664162_- | 2625 | -898.90 | -892.70 | -926.70 |
| ADediting_258419 | ENST00000438025.5 | chr11_5663943_- | 655 | -258.50 | -255.70 | -283.40 |
| ADediting_258420 | ENST00000438025.5 | chr11_5663945_- | 653 | -256.70 | -255.70 | -283.40 |
| ADediting_258421 | ENST00000438025.5 | chr11_5663957_- | 641 | -257.50 | -255.70 | -283.40 |
| ADediting_258422 | ENST00000438025.5 | chr11_5663958_- | 640 | -258.80 | -255.70 | -283.40 |
| ADediting_258423 | ENST00000438025.5 | chr11_5663985_- | 613 | -259.40 | -255.70 | -283.40 |
| ADediting_1527079 | ENST00000438025.5 | chr11_5663990_- | 608 | -257.50 | -255.70 | -283.40 |
| ADediting_258424 | ENST00000438025.5 | chr11_5664000_- | 598 | -257.00 | -255.70 | -283.40 |
| ADediting_258425 | ENST00000438025.5 | chr11_5664036_- | 562 | -256.50 | -255.70 | -283.40 |
| ADediting_258426 | ENST00000438025.5 | chr11_5664039_- | 559 | -257.40 | -255.70 | -283.40 |
| ADediting_1527080 | ENST00000438025.5 | chr11_5664045_- | 553 | -256.70 | -255.70 | -283.40 |
| ADediting_258427 | ENST00000438025.5 | chr11_5664079_- | 519 | -256.80 | -255.70 | -283.40 |
| ADediting_258428 | ENST00000438025.5 | chr11_5664089_- | 509 | -258.30 | -255.70 | -283.40 |
| ADediting_258429 | ENST00000438025.5 | chr11_5664093_- | 505 | -256.60 | -255.70 | -283.40 |
| ADediting_258430 | ENST00000438025.5 | chr11_5664101_- | 497 | -256.60 | -255.70 | -283.40 |
| ADediting_258431 | ENST00000438025.5 | chr11_5664114_- | 484 | -261.70 | -255.70 | -283.40 |
| ADediting_258432 | ENST00000438025.5 | chr11_5664115_- | 483 | -258.30 | -255.70 | -283.40 |
| ADediting_258433 | ENST00000438025.5 | chr11_5664118_- | 480 | -262.30 | -255.70 | -283.40 |
| ADediting_258434 | ENST00000438025.5 | chr11_5664119_- | 479 | -256.20 | -255.70 | -283.40 |
| ADediting_258435 | ENST00000438025.5 | chr11_5664125_- | 473 | -255.90 | -255.70 | -283.40 |
| ADediting_258436 | ENST00000438025.5 | chr11_5664132_- | 466 | -256.60 | -255.70 | -283.40 |
| ADediting_258437 | ENST00000438025.5 | chr11_5664138_- | 460 | -260.00 | -255.70 | -283.40 |
| ADediting_258438 | ENST00000438025.5 | chr11_5664157_- | 441 | -255.30 | -255.70 | -283.40 |
| ADediting_258439 | ENST00000438025.5 | chr11_5664162_- | 436 | -258.00 | -255.70 | -283.40 |
| ADediting_258419 | ENST00000380027.5 | chr11_5663943_- | 1910 | -703.10 | -700.80 | -733.10 |
| ADediting_258420 | ENST00000380027.5 | chr11_5663945_- | 1908 | -701.30 | -700.80 | -733.10 |
| ADediting_258421 | ENST00000380027.5 | chr11_5663957_- | 1896 | -702.40 | -700.80 | -733.10 |
| ADediting_258422 | ENST00000380027.5 | chr11_5663958_- | 1895 | -703.50 | -700.80 | -733.10 |
| ADediting_258423 | ENST00000380027.5 | chr11_5663985_- | 1868 | -702.70 | -700.80 | -733.10 |
| ADediting_1527079 | ENST00000380027.5 | chr11_5663990_- | 1863 | -703.60 | -700.80 | -733.10 |
| ADediting_258424 | ENST00000380027.5 | chr11_5664000_- | 1853 | -700.90 | -700.80 | -733.10 |
| ADediting_258425 | ENST00000380027.5 | chr11_5664036_- | 1817 | -704.70 | -700.80 | -733.10 |
| ADediting_258426 | ENST00000380027.5 | chr11_5664039_- | 1814 | -702.60 | -700.80 | -733.10 |
| ADediting_1527080 | ENST00000380027.5 | chr11_5664045_- | 1808 | -701.30 | -700.80 | -733.10 |
| ADediting_258427 | ENST00000380027.5 | chr11_5664079_- | 1774 | -700.90 | -700.80 | -733.10 |
| ADediting_258428 | ENST00000380027.5 | chr11_5664089_- | 1764 | -702.30 | -700.80 | -733.10 |
| ADediting_258429 | ENST00000380027.5 | chr11_5664093_- | 1760 | -702.30 | -700.80 | -733.10 |
| ADediting_258430 | ENST00000380027.5 | chr11_5664101_- | 1752 | -700.70 | -700.80 | -733.10 |
| ADediting_258431 | ENST00000380027.5 | chr11_5664114_- | 1739 | -704.70 | -700.80 | -733.10 |
| ADediting_258432 | ENST00000380027.5 | chr11_5664115_- | 1738 | -703.40 | -700.80 | -733.10 |
| ADediting_258433 | ENST00000380027.5 | chr11_5664118_- | 1735 | -707.40 | -700.80 | -733.10 |
| ADediting_258434 | ENST00000380027.5 | chr11_5664119_- | 1734 | -701.30 | -700.80 | -733.10 |
| ADediting_258435 | ENST00000380027.5 | chr11_5664125_- | 1728 | -702.40 | -700.80 | -733.10 |
| ADediting_258436 | ENST00000380027.5 | chr11_5664132_- | 1721 | -700.60 | -700.80 | -733.10 |
| ADediting_258437 | ENST00000380027.5 | chr11_5664138_- | 1715 | -705.10 | -700.80 | -733.10 |
| ADediting_258438 | ENST00000380027.5 | chr11_5664157_- | 1696 | -700.40 | -700.80 | -733.10 |
| ADediting_258439 | ENST00000380027.5 | chr11_5664162_- | 1691 | -706.00 | -700.80 | -733.10 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_258427 | ENST00000483835.5 | chr11_5664079_- | 897 | -306.00 | -305.10 | -318.80 |
| ADediting_258428 | ENST00000483835.5 | chr11_5664089_- | 887 | -307.20 | -305.10 | -318.80 |
| ADediting_258429 | ENST00000483835.5 | chr11_5664093_- | 883 | -306.20 | -305.10 | -318.80 |
| ADediting_258430 | ENST00000483835.5 | chr11_5664101_- | 875 | -304.40 | -305.10 | -318.80 |
| ADediting_258431 | ENST00000483835.5 | chr11_5664114_- | 862 | -309.30 | -305.10 | -318.80 |
| ADediting_258432 | ENST00000483835.5 | chr11_5664115_- | 861 | -307.70 | -305.10 | -318.80 |
| ADediting_258433 | ENST00000483835.5 | chr11_5664118_- | 858 | -311.70 | -305.10 | -318.80 |
| ADediting_258434 | ENST00000483835.5 | chr11_5664119_- | 857 | -305.60 | -305.10 | -318.80 |
| ADediting_258435 | ENST00000483835.5 | chr11_5664125_- | 851 | -308.00 | -305.10 | -318.80 |
| ADediting_258436 | ENST00000483835.5 | chr11_5664132_- | 844 | -305.50 | -305.10 | -318.80 |
| ADediting_258437 | ENST00000483835.5 | chr11_5664138_- | 838 | -309.40 | -305.10 | -318.80 |
| ADediting_258438 | ENST00000483835.5 | chr11_5664157_- | 819 | -305.10 | -305.10 | -318.80 |
| ADediting_258439 | ENST00000483835.5 | chr11_5664162_- | 814 | -311.10 | -305.10 | -318.80 |
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Relation with ADAR for TRIM5 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_258439 | chr11_5664162_- | 0.0857206807178388 | 0.0977605163228107 | 0.707969632873639 | -0.0213588171587467 | 2.76014615562471e-08 | 0.309050121234106 |
| DLPFC | ADediting_258449 | chr11_5668561_- | 0.422821067620666 | -0.0456850014484927 | 0.0114137272056154 | -0.14351651532011 | 1.09540963471747e-09 | 0.337328218731164 |
| DLPFC | ADediting_258462 | chr11_5668723_- | 0.699057288878682 | 0.0220434080085286 | 0.0902747799076371 | -0.0963751566239719 | 2.44824992460447e-14 | 0.415035421437395 |
| DLPFC | ADediting_258466 | chr11_5669204_- | 0.570577272140443 | -0.0323370894738572 | 0.0454781573067208 | -0.113694677725441 | 3.59224041244183e-13 | 0.397391013527062 |
| DLPFC | ADediting_258467 | chr11_5669217_- | 0.436612307770808 | 0.0443406499744182 | 0.407151504024922 | -0.0472438687297372 | 1.12925295534174e-10 | 0.355646348880967 |
| DLPFC | ADediting_258473 | chr11_5669741_- | 0.703585686619549 | 0.0216951755933217 | 0.106752520871702 | -0.0917874674844882 | 2.74861792740811e-13 | 0.399196948080503 |
| DLPFC | ADediting_258480 | chr11_5669813_- | 0.84396446299067 | 0.0112239002286708 | 0.148636564858459 | -0.0822275736232696 | 6.62404526290947e-10 | 0.341487117820708 |
| DLPFC | ADediting_258486 | chr11_5669891_- | 0.118679598603102 | -0.0888049222688032 | 0.0027991569079574 | -0.169219996170275 | 5.78521888054281e-08 | 0.302127093510241 |
| DLPFC | ADediting_258488 | chr11_5669893_- | 0.0995114195538207 | -0.0937287827730693 | 0.00130159646221783 | -0.181844916143756 | 5.46685870938606e-08 | 0.302663018281181 |
| DLPFC | ADediting_258498 | chr11_5670292_- | 0.149135543312492 | -0.0821270044483224 | 0.00390261817175403 | -0.16346612079424 | 1.79795505670588e-08 | 0.312979699270028 |
| DLPFC | ADediting_258504 | chr11_5670442_- | 0.729261697161981 | -0.0197354139904876 | 0.0307622929276925 | -0.122719038131168 | 1.13164342352278e-11 | 0.373069090863316 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.22023838761908e-09 | 0.336427843108252 | 0.0831637391520388 | 0.0985644701674286 | 2.10491281095464e-29 | 0.581200369079182 |
| AC | 4.38493344361813e-34 | 0.671112516155867 | 1.25312207861847e-17 | 0.50559021796144 | 2.14283228786489e-14 | 0.458440982939072 |
| CER | 9.07294731019646e-05 | 0.314088999918422 | 0.000286516087856778 | 0.292116511410537 | 3.09564938945197e-08 | 0.433126172003094 |
| TCX | 0.00502614858316269 | 0.227939623990662 | 0.100050121794049 | -0.134795951202158 | 1.08004856869576e-07 | 0.417314666737153 |
| FP | 1.39442747448467e-05 | 0.319334130809766 | 0.00118570931242288 | 0.241123251070597 | 3.0898314472421e-05 | 0.306902240376974 |
| IFG | 0.248325168145098 | 0.239773364459768 | 0.0749688559451668 | 0.362464325499696 | 0.0468660598919019 | 0.401163619630658 |
| PG | 4.06775719599309e-10 | 0.43796230737803 | 2.42220315542287e-06 | 0.337752913092823 | 0.00853973897675146 | 0.192330106888645 |
| STG | 0.513959407799057 | 0.0722026065153581 | 0.654534284952556 | -0.0495354412530682 | 0.000196778693641729 | 0.395459599576956 |
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Relation with AD stages for TRIM5 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 1.00816608870334e-06 | 0.450320793300657 |
| TCX | 7.87351477673368e-11 | 0.579107090446109 |
| PG | 2.42355816905643e-07 | 0.367735523715792 |
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RelatedDrugs for TRIM5 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TRIM5 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| TRIM5 | C0019693 | HIV Infections | 1 | CTD_human |
| TRIM5 | C4505456 | HIV Coinfection | 1 | CTD_human |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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