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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for CBR4 |
 Gene summary |
| Gene information | Gene symbol | CBR4 | Gene ID | 84869 |
| Gene name | carbonyl reductase 4 | |
| Synonyms | SDR45C1 | |
| Cytomap | 4q32.3 | |
| Type of gene | protein-coding | |
| Description | carbonyl reductase family member 43-ketoacyl-[acyl-carrier-protein] reductase beta subunit3-oxoacyl-[acyl-carrier-protein] reductaseKAR beta subunitcarbonic reductase 4quinone reductase CBR4short chain dehydrogenase/reductase family 45C member 1 | |
| Modification date | 20200313 | |
| UniProtAcc | Q8N4T8, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| CBR4 | GO:0051289 | protein homotetramerization | 19000905 |
| CBR4 | GO:0051290 | protein heterotetramerization | 25203508 |
| CBR4 | GO:0055114 | oxidation-reduction process | 25203508 |
Top |
RNA A-to-I events for CBR4 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1115707(168953588, -), ADediting_1115708(168953670, -), ADediting_1115709(168953697, -), ADediting_1115710(168953699, -), ADediting_1115711(168958117, -), ADediting_1115712(168958140, -), ADediting_1115713(168958142, -), ADediting_1115714(168958152, -), ADediting_1115715(168958155, -), ADediting_1115716(168958164, -), ADediting_1115717(168958181, -), ADediting_1115718(168958228, -), ADediting_1115719(168959638, -), ADediting_1115720(168959662, -), ADediting_1115721(168959671, -), ADediting_1115722(168959690, -), ADediting_1115723(168959694, -), ADediting_1115724(168959703, -), ADediting_1115725(168959704, -), ADediting_1115726(168959722, -), ADediting_1115727(168959742, -), ADediting_1115728(168959753, -), ADediting_1115729(168959758, -), ADediting_1115730(168959759, -), ADediting_1115731(168959760, -), ADediting_1115732(168959765, -), ADediting_1115733(168959778, -), ADediting_1115734(168959781, -), ADediting_1115735(168959792, -), ADediting_1115736(168961803, -), ADediting_1115737(168961827, -), ADediting_1115738(168963531, -), ADediting_1115739(168963533, -), ADediting_1115740(168963554, -), ADediting_1115741(168963555, -), ADediting_1115742(168963560, -), ADediting_1115743(168963563, -), ADediting_1115744(168963567, -), ADediting_1115745(168963599, -), ADediting_1115746(168963608, -), ADediting_1115747(168963609, -), ADediting_1115748(168963663, -), ADediting_1115749(168963664, -), ADediting_1115750(168963665, -), ADediting_1115751(168963673, -), ADediting_1115752(168963674, -), ADediting_1115753(168963683, -), ADediting_1115754(168963697, -), ADediting_1115755(168963712, -), ADediting_1115756(168990497, -), ADediting_1115757(168990528, -), ADediting_1115758(168990539, -), ADediting_1115759(168990547, -), ADediting_1115760(168990548, -), ADediting_1115761(168990558, -), ADediting_1115762(168990565, -), ADediting_1115763(168990569, -), ADediting_1115764(168990575, -), ADediting_1115765(168990577, -), ADediting_1115766(168990597, -), ADediting_1115767(168990601, -), ADediting_1115768(168990604, -), ADediting_1115769(168990605, -), ADediting_1115770(168990606, -), ADediting_1115771(168990607, -), ADediting_1115772(168990613, -), ADediting_1115773(168990614, -), ADediting_1115774(168990615, -), ADediting_1115775(168990616, -), ADediting_1115776(168990617, -), ADediting_1115777(168990646, -), ADediting_1115778(168990647, -), ADediting_1115779(168990654, -), ADediting_1115780(168990694, -), ADediting_1115781(168990695, -), ADediting_1115782(168990796, -), ADediting_1115783(168990808, -), ADediting_1115784(168990809, -), ADediting_1115785(168990810, -), ADediting_1115786(168990836, -), ADediting_1115787(168990890, -), ADediting_1115788(168990905, -), ADediting_1115789(168990906, -), ADediting_1115790(168990910, -), ADediting_1115791(168990930, -), ADediting_1115792(168990932, -), ADediting_1115793(168990942, -), ADediting_1115794(168990954, -), ADediting_1115795(168990967, -), ADediting_1115796(168990971, -), ADediting_1115797(168990978, -), ADediting_1115798(168990991, -), ADediting_1115799(168991007, -), ADediting_1115800(168991010, -), ADediting_1115801(168991028, -), ADediting_1115802(168991041, -), ADediting_1115803(168993303, -), ADediting_1115804(168993322, -), ADediting_1115805(168993349, -), ADediting_1115806(168993367, -), ADediting_1115807(168993448, -), ADediting_1115808(168993500, -), ADediting_1115809(168993502, -), ADediting_1115810(168994676, -), ADediting_1115811(168994727, -), ADediting_1115812(168994851, -), ADediting_1115813(168994852, -), ADediting_1115814(168994864, -), ADediting_1115815(168994870, -), ADediting_1115816(168994871, -), ADediting_1115817(168994886, -), ADediting_1115818(168994892, -), ADediting_1115819(168994987, -), ADediting_1115820(168995052, -), ADediting_1115821(168997470, -), ADediting_1115822(168997472, -), ADediting_1115823(168997478, -), ADediting_1115824(168997511, -), ADediting_1115825(168997512, -), ADediting_1115826(168997525, -), ADediting_1115827(168997527, -), ADediting_1115828(168997532, -), ADediting_1115829(168997537, -), ADediting_1115830(168997548, -), ADediting_1115831(168997558, -), ADediting_1115832(168997561, -), ADediting_1115833(169001099, -), ADediting_1115834(169001123, -), ADediting_1115835(169003392, -), ADediting_1115836(169003417, -), ADediting_1115837(169003421, -), ADediting_1115838(169003424, -), ADediting_1115839(169003425, -), ADediting_1115840(169003429, -), ADediting_1115841(169003435, -), ADediting_1115842(169003444, -), ADediting_1115843(169003448, -), ADediting_1115844(169003576, -), ADediting_1115845(169003577, -), ADediting_1115846(169003601, -), ADediting_1115847(169003643, -), ADediting_1115848(169003674, -), ADediting_1115849(169004401, -), ADediting_1115850(169004485, -), ADediting_1115851(169004492, -), ADediting_1115852(169004493, -), ADediting_1115853(169004500, -), ADediting_1115854(169004518, -), ADediting_1115855(169004526, -), ADediting_1115856(169004527, -), ADediting_1115857(169004570, -), ADediting_1115858(169004571, -), ADediting_1115859(169004582, -), ADediting_1115860(169004583, -), ADediting_1115861(169004586, -), ADediting_1115862(169004587, -), ADediting_1115863(169004588, -), ADediting_1115864(169004594, -), ADediting_1115865(169004598, -), ADediting_1115866(169004626, -), ADediting_1576717(168990489, -), ADediting_1576718(168990545, -), ADediting_1576719(168990552, -), ADediting_1576720(168990672, -), ADediting_1576721(168990678, -), ADediting_1576722(168990686, -), ADediting_1576723(168990689, -), ADediting_1576724(168990919, -), ADediting_1576725(168990972, -), ADediting_1576726(168997460, -), ADediting_1576727(169004525, -), ADediting_1651016(168941627, -), ADediting_1651017(168941644, -), ADediting_1651018(168941646, -), ADediting_1651019(168941648, -), ADediting_1651020(168941665, -), ADediting_1651021(168941669, -), ADediting_1651022(168941689, -), ADediting_1651023(168941697, -), ADediting_1651024(168990470, -), ADediting_1651025(168997488, -), ADediting_1651026(169003397, -), ADediting_1651027(169003447, -), ADediting_1651028(169003485, -), ADediting_1651029(169003517, -), ADediting_1651030(169003522, -), ADediting_1651031(169003524, -), ADediting_1651032(169003529, -), ADediting_1651033(169003530, -), ADediting_1651034(169003533, -), ADediting_1651035(169003534, -), ADediting_1651036(169003537, -), ADediting_1651037(169003545, -), ADediting_1651038(169003564, -), ADediting_1651039(169003573, -), ADediting_1651040(169003574, -), ADediting_1651041(169003575, -), ADediting_1651042(169003585, -), ADediting_1651043(169003593, -), ADediting_1651044(169003598, -), ADediting_1651045(169003613, -), ADediting_1651046(169003635, -), ADediting_1651047(169004389, -), ADediting_1651048(169004407, -), ADediting_1651049(169004424, -), ADediting_1651050(169004425, -), ADediting_1651051(169004429, -), ADediting_1651052(169004436, -), ADediting_1651053(169004439, -), ADediting_1651054(169004451, -), ADediting_1651055(169004452, -), ADediting_1651056(169004453, -), ADediting_1651057(169004459, -), ADediting_1651058(169004467, -), ADediting_1651059(169004474, -), ADediting_1651060(169004482, -), ADediting_1651061(169004487, -), ADediting_1651062(169004488, -), ADediting_1651063(169004491, -), ADediting_1651064(169004504, -), ADediting_1651065(169004505, -), ADediting_1651066(169004506, -), ADediting_1651067(169004508, -), ADediting_1651068(169004513, -), ADediting_1651069(169004529, -), ADediting_1651070(169004541, -), ADediting_1651071(169004543, -), ADediting_1651072(169004551, -), ADediting_1651073(169004563, -), ADediting_1651074(169004584, -), ADediting_1651075(169004619, -), ADediting_1651076(169004620, -), ADediting_1651077(169004623, -), ADediting_1651078(169004624, -), ADediting_1651079(169004625, -), |
Top |
RNA editing positional annotations for CBR4 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1115707 | chr4_168953588_- | intronic |
| ADediting_1115708 | chr4_168953670_- | intronic |
| ADediting_1115709 | chr4_168953697_- | intronic |
| ADediting_1115710 | chr4_168953699_- | intronic |
| ADediting_1115711 | chr4_168958117_- | intronic |
| ADediting_1115712 | chr4_168958140_- | intronic |
| ADediting_1115713 | chr4_168958142_- | intronic |
| ADediting_1115714 | chr4_168958152_- | intronic |
| ADediting_1115715 | chr4_168958155_- | intronic |
| ADediting_1115716 | chr4_168958164_- | intronic |
| ADediting_1115717 | chr4_168958181_- | intronic |
| ADediting_1115718 | chr4_168958228_- | intronic |
| ADediting_1115719 | chr4_168959638_- | intronic |
| ADediting_1115720 | chr4_168959662_- | intronic |
| ADediting_1115721 | chr4_168959671_- | intronic |
| ADediting_1115722 | chr4_168959690_- | intronic |
| ADediting_1115723 | chr4_168959694_- | intronic |
| ADediting_1115724 | chr4_168959703_- | intronic |
| ADediting_1115725 | chr4_168959704_- | intronic |
| ADediting_1115726 | chr4_168959722_- | intronic |
| ADediting_1115727 | chr4_168959742_- | intronic |
| ADediting_1115728 | chr4_168959753_- | intronic |
| ADediting_1115729 | chr4_168959758_- | intronic |
| ADediting_1115730 | chr4_168959759_- | intronic |
| ADediting_1115731 | chr4_168959760_- | intronic |
| ADediting_1115732 | chr4_168959765_- | intronic |
| ADediting_1115733 | chr4_168959778_- | intronic |
| ADediting_1115734 | chr4_168959781_- | intronic |
| ADediting_1115735 | chr4_168959792_- | intronic |
| ADediting_1115736 | chr4_168961803_- | intronic |
| ADediting_1115737 | chr4_168961827_- | intronic |
| ADediting_1115738 | chr4_168963531_- | intronic |
| ADediting_1115739 | chr4_168963533_- | intronic |
| ADediting_1115740 | chr4_168963554_- | intronic |
| ADediting_1115741 | chr4_168963555_- | intronic |
| ADediting_1115742 | chr4_168963560_- | intronic |
| ADediting_1115743 | chr4_168963563_- | intronic |
| ADediting_1115744 | chr4_168963567_- | intronic |
| ADediting_1115745 | chr4_168963599_- | intronic |
| ADediting_1115746 | chr4_168963608_- | intronic |
| ADediting_1115747 | chr4_168963609_- | intronic |
| ADediting_1115748 | chr4_168963663_- | intronic |
| ADediting_1115749 | chr4_168963664_- | intronic |
| ADediting_1115750 | chr4_168963665_- | intronic |
| ADediting_1115751 | chr4_168963673_- | intronic |
| ADediting_1115752 | chr4_168963674_- | intronic |
| ADediting_1115753 | chr4_168963683_- | intronic |
| ADediting_1115754 | chr4_168963697_- | intronic |
| ADediting_1115755 | chr4_168963712_- | intronic |
| ADediting_1115756 | chr4_168990497_- | intronic |
| ADediting_1115757 | chr4_168990528_- | intronic |
| ADediting_1115758 | chr4_168990539_- | intronic |
| ADediting_1115759 | chr4_168990547_- | intronic |
| ADediting_1115760 | chr4_168990548_- | intronic |
| ADediting_1115761 | chr4_168990558_- | intronic |
| ADediting_1115762 | chr4_168990565_- | intronic |
| ADediting_1115763 | chr4_168990569_- | intronic |
| ADediting_1115764 | chr4_168990575_- | intronic |
| ADediting_1115765 | chr4_168990577_- | intronic |
| ADediting_1115766 | chr4_168990597_- | intronic |
| ADediting_1115767 | chr4_168990601_- | intronic |
| ADediting_1115768 | chr4_168990604_- | intronic |
| ADediting_1115769 | chr4_168990605_- | intronic |
| ADediting_1115770 | chr4_168990606_- | intronic |
| ADediting_1115771 | chr4_168990607_- | intronic |
| ADediting_1115772 | chr4_168990613_- | intronic |
| ADediting_1115773 | chr4_168990614_- | intronic |
| ADediting_1115774 | chr4_168990615_- | intronic |
| ADediting_1115775 | chr4_168990616_- | intronic |
| ADediting_1115776 | chr4_168990617_- | intronic |
| ADediting_1115777 | chr4_168990646_- | intronic |
| ADediting_1115778 | chr4_168990647_- | intronic |
| ADediting_1115779 | chr4_168990654_- | intronic |
| ADediting_1115780 | chr4_168990694_- | intronic |
| ADediting_1115781 | chr4_168990695_- | intronic |
| ADediting_1115782 | chr4_168990796_- | intronic |
| ADediting_1115783 | chr4_168990808_- | intronic |
| ADediting_1115784 | chr4_168990809_- | intronic |
| ADediting_1115785 | chr4_168990810_- | intronic |
| ADediting_1115786 | chr4_168990836_- | intronic |
| ADediting_1115787 | chr4_168990890_- | intronic |
| ADediting_1115788 | chr4_168990905_- | intronic |
| ADediting_1115789 | chr4_168990906_- | intronic |
| ADediting_1115790 | chr4_168990910_- | intronic |
| ADediting_1115791 | chr4_168990930_- | intronic |
| ADediting_1115792 | chr4_168990932_- | intronic |
| ADediting_1115793 | chr4_168990942_- | intronic |
| ADediting_1115794 | chr4_168990954_- | intronic |
| ADediting_1115795 | chr4_168990967_- | intronic |
| ADediting_1115796 | chr4_168990971_- | intronic |
| ADediting_1115797 | chr4_168990978_- | intronic |
| ADediting_1115798 | chr4_168990991_- | intronic |
| ADediting_1115799 | chr4_168991007_- | intronic |
| ADediting_1115800 | chr4_168991010_- | intronic |
| ADediting_1115801 | chr4_168991028_- | intronic |
| ADediting_1115802 | chr4_168991041_- | intronic |
| ADediting_1115803 | chr4_168993303_- | intronic |
| ADediting_1115804 | chr4_168993322_- | intronic |
| ADediting_1115805 | chr4_168993349_- | intronic |
| ADediting_1115806 | chr4_168993367_- | intronic |
| ADediting_1115807 | chr4_168993448_- | intronic |
| ADediting_1115808 | chr4_168993500_- | intronic |
| ADediting_1115809 | chr4_168993502_- | intronic |
| ADediting_1115810 | chr4_168994676_- | intronic |
| ADediting_1115811 | chr4_168994727_- | intronic |
| ADediting_1115812 | chr4_168994851_- | intronic |
| ADediting_1115813 | chr4_168994852_- | intronic |
| ADediting_1115814 | chr4_168994864_- | intronic |
| ADediting_1115815 | chr4_168994870_- | intronic |
| ADediting_1115816 | chr4_168994871_- | intronic |
| ADediting_1115817 | chr4_168994886_- | intronic |
| ADediting_1115818 | chr4_168994892_- | intronic |
| ADediting_1115819 | chr4_168994987_- | intronic |
| ADediting_1115820 | chr4_168995052_- | intronic |
| ADediting_1115821 | chr4_168997470_- | intronic |
| ADediting_1115822 | chr4_168997472_- | intronic |
| ADediting_1115823 | chr4_168997478_- | intronic |
| ADediting_1115824 | chr4_168997511_- | intronic |
| ADediting_1115825 | chr4_168997512_- | intronic |
| ADediting_1115826 | chr4_168997525_- | intronic |
| ADediting_1115827 | chr4_168997527_- | intronic |
| ADediting_1115828 | chr4_168997532_- | intronic |
| ADediting_1115829 | chr4_168997537_- | intronic |
| ADediting_1115830 | chr4_168997548_- | intronic |
| ADediting_1115831 | chr4_168997558_- | intronic |
| ADediting_1115832 | chr4_168997561_- | intronic |
| ADediting_1115833 | chr4_169001099_- | intronic |
| ADediting_1115834 | chr4_169001123_- | intronic |
| ADediting_1115835 | chr4_169003392_- | intronic |
| ADediting_1115836 | chr4_169003417_- | intronic |
| ADediting_1115837 | chr4_169003421_- | intronic |
| ADediting_1115838 | chr4_169003424_- | intronic |
| ADediting_1115839 | chr4_169003425_- | intronic |
| ADediting_1115840 | chr4_169003429_- | intronic |
| ADediting_1115841 | chr4_169003435_- | intronic |
| ADediting_1115842 | chr4_169003444_- | intronic |
| ADediting_1115843 | chr4_169003448_- | intronic |
| ADediting_1115844 | chr4_169003576_- | intronic |
| ADediting_1115845 | chr4_169003577_- | intronic |
| ADediting_1115846 | chr4_169003601_- | intronic |
| ADediting_1115847 | chr4_169003643_- | intronic |
| ADediting_1115848 | chr4_169003674_- | intronic |
| ADediting_1115849 | chr4_169004401_- | intronic |
| ADediting_1115850 | chr4_169004485_- | intronic |
| ADediting_1115851 | chr4_169004492_- | intronic |
| ADediting_1115852 | chr4_169004493_- | intronic |
| ADediting_1115853 | chr4_169004500_- | intronic |
| ADediting_1115854 | chr4_169004518_- | intronic |
| ADediting_1115855 | chr4_169004526_- | intronic |
| ADediting_1115856 | chr4_169004527_- | intronic |
| ADediting_1115857 | chr4_169004570_- | intronic |
| ADediting_1115858 | chr4_169004571_- | intronic |
| ADediting_1115859 | chr4_169004582_- | intronic |
| ADediting_1115860 | chr4_169004583_- | intronic |
| ADediting_1115861 | chr4_169004586_- | intronic |
| ADediting_1115862 | chr4_169004587_- | intronic |
| ADediting_1115863 | chr4_169004588_- | intronic |
| ADediting_1115864 | chr4_169004594_- | intronic |
| ADediting_1115865 | chr4_169004598_- | intronic |
| ADediting_1115866 | chr4_169004626_- | intronic |
| ADediting_1576717 | chr4_168990489_- | intronic |
| ADediting_1576718 | chr4_168990545_- | intronic |
| ADediting_1576719 | chr4_168990552_- | intronic |
| ADediting_1576720 | chr4_168990672_- | intronic |
| ADediting_1576721 | chr4_168990678_- | intronic |
| ADediting_1576722 | chr4_168990686_- | intronic |
| ADediting_1576723 | chr4_168990689_- | intronic |
| ADediting_1576724 | chr4_168990919_- | intronic |
| ADediting_1576725 | chr4_168990972_- | intronic |
| ADediting_1576726 | chr4_168997460_- | intronic |
| ADediting_1576727 | chr4_169004525_- | intronic |
| ADediting_1651016 | chr4_168941627_- | intronic |
| ADediting_1651017 | chr4_168941644_- | intronic |
| ADediting_1651018 | chr4_168941646_- | intronic |
| ADediting_1651019 | chr4_168941648_- | intronic |
| ADediting_1651020 | chr4_168941665_- | intronic |
| ADediting_1651021 | chr4_168941669_- | intronic |
| ADediting_1651022 | chr4_168941689_- | intronic |
| ADediting_1651023 | chr4_168941697_- | intronic |
| ADediting_1651024 | chr4_168990470_- | intronic |
| ADediting_1651025 | chr4_168997488_- | intronic |
| ADediting_1651026 | chr4_169003397_- | intronic |
| ADediting_1651027 | chr4_169003447_- | intronic |
| ADediting_1651028 | chr4_169003485_- | intronic |
| ADediting_1651029 | chr4_169003517_- | intronic |
| ADediting_1651030 | chr4_169003522_- | intronic |
| ADediting_1651031 | chr4_169003524_- | intronic |
| ADediting_1651032 | chr4_169003529_- | intronic |
| ADediting_1651033 | chr4_169003530_- | intronic |
| ADediting_1651034 | chr4_169003533_- | intronic |
| ADediting_1651035 | chr4_169003534_- | intronic |
| ADediting_1651036 | chr4_169003537_- | intronic |
| ADediting_1651037 | chr4_169003545_- | intronic |
| ADediting_1651038 | chr4_169003564_- | intronic |
| ADediting_1651039 | chr4_169003573_- | intronic |
| ADediting_1651040 | chr4_169003574_- | intronic |
| ADediting_1651041 | chr4_169003575_- | intronic |
| ADediting_1651042 | chr4_169003585_- | intronic |
| ADediting_1651043 | chr4_169003593_- | intronic |
| ADediting_1651044 | chr4_169003598_- | intronic |
| ADediting_1651045 | chr4_169003613_- | intronic |
| ADediting_1651046 | chr4_169003635_- | intronic |
| ADediting_1651047 | chr4_169004389_- | intronic |
| ADediting_1651048 | chr4_169004407_- | intronic |
| ADediting_1651049 | chr4_169004424_- | intronic |
| ADediting_1651050 | chr4_169004425_- | intronic |
| ADediting_1651051 | chr4_169004429_- | intronic |
| ADediting_1651052 | chr4_169004436_- | intronic |
| ADediting_1651053 | chr4_169004439_- | intronic |
| ADediting_1651054 | chr4_169004451_- | intronic |
| ADediting_1651055 | chr4_169004452_- | intronic |
| ADediting_1651056 | chr4_169004453_- | intronic |
| ADediting_1651057 | chr4_169004459_- | intronic |
| ADediting_1651058 | chr4_169004467_- | intronic |
| ADediting_1651059 | chr4_169004474_- | intronic |
| ADediting_1651060 | chr4_169004482_- | intronic |
| ADediting_1651061 | chr4_169004487_- | intronic |
| ADediting_1651062 | chr4_169004488_- | intronic |
| ADediting_1651063 | chr4_169004491_- | intronic |
| ADediting_1651064 | chr4_169004504_- | intronic |
| ADediting_1651065 | chr4_169004505_- | intronic |
| ADediting_1651066 | chr4_169004506_- | intronic |
| ADediting_1651067 | chr4_169004508_- | intronic |
| ADediting_1651068 | chr4_169004513_- | intronic |
| ADediting_1651069 | chr4_169004529_- | intronic |
| ADediting_1651070 | chr4_169004541_- | intronic |
| ADediting_1651071 | chr4_169004543_- | intronic |
| ADediting_1651072 | chr4_169004551_- | intronic |
| ADediting_1651073 | chr4_169004563_- | intronic |
| ADediting_1651074 | chr4_169004584_- | intronic |
| ADediting_1651075 | chr4_169004619_- | intronic |
| ADediting_1651076 | chr4_169004620_- | intronic |
| ADediting_1651077 | chr4_169004623_- | intronic |
| ADediting_1651078 | chr4_169004624_- | intronic |
| ADediting_1651079 | chr4_169004625_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1115707 | chr4_168953588_- | SINE | Alu | Name=AluJo |
| ADediting_1115708 | chr4_168953670_- | SINE | Alu | Name=AluJo |
| ADediting_1115709 | chr4_168953697_- | SINE | Alu | Name=AluJo |
| ADediting_1115710 | chr4_168953699_- | SINE | Alu | Name=AluJo |
| ADediting_1115711 | chr4_168958117_- | SINE | Alu | Name=AluSx1 |
| ADediting_1115712 | chr4_168958140_- | SINE | Alu | Name=AluSx1 |
| ADediting_1115713 | chr4_168958142_- | SINE | Alu | Name=AluSx1 |
| ADediting_1115714 | chr4_168958152_- | SINE | Alu | Name=AluSx1 |
| ADediting_1115715 | chr4_168958155_- | SINE | Alu | Name=AluSx1 |
| ADediting_1115716 | chr4_168958164_- | SINE | Alu | Name=AluSx1 |
| ADediting_1115717 | chr4_168958181_- | SINE | Alu | Name=AluSx1 |
| ADediting_1115718 | chr4_168958228_- | SINE | Alu | Name=AluSx1 |
| ADediting_1115719 | chr4_168959638_- | SINE | Alu | Name=AluSg |
| ADediting_1115720 | chr4_168959662_- | SINE | Alu | Name=AluSg |
| ADediting_1115721 | chr4_168959671_- | SINE | Alu | Name=AluSg |
| ADediting_1115722 | chr4_168959690_- | SINE | Alu | Name=AluSg |
| ADediting_1115723 | chr4_168959694_- | SINE | Alu | Name=AluSg |
| ADediting_1115724 | chr4_168959703_- | SINE | Alu | Name=AluSg |
| ADediting_1115725 | chr4_168959704_- | SINE | Alu | Name=AluSg |
| ADediting_1115726 | chr4_168959722_- | SINE | Alu | Name=AluSg |
| ADediting_1115727 | chr4_168959742_- | SINE | Alu | Name=AluSg |
| ADediting_1115728 | chr4_168959753_- | SINE | Alu | Name=AluSg |
| ADediting_1115729 | chr4_168959758_- | SINE | Alu | Name=AluSg |
| ADediting_1115730 | chr4_168959759_- | SINE | Alu | Name=AluSg |
| ADediting_1115731 | chr4_168959760_- | SINE | Alu | Name=AluSg |
| ADediting_1115732 | chr4_168959765_- | SINE | Alu | Name=AluSg |
| ADediting_1115733 | chr4_168959778_- | SINE | Alu | Name=AluSg |
| ADediting_1115734 | chr4_168959781_- | SINE | Alu | Name=AluSg |
| ADediting_1115735 | chr4_168959792_- | SINE | Alu | Name=AluSg |
| ADediting_1115736 | chr4_168961803_- | SINE | Alu | Name=AluSx1 |
| ADediting_1115737 | chr4_168961827_- | SINE | Alu | Name=AluSx1 |
| ADediting_1115738 | chr4_168963531_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115739 | chr4_168963533_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115740 | chr4_168963554_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115741 | chr4_168963555_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115742 | chr4_168963560_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115743 | chr4_168963563_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115744 | chr4_168963567_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115745 | chr4_168963599_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115746 | chr4_168963608_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115747 | chr4_168963609_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115748 | chr4_168963663_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115749 | chr4_168963664_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115750 | chr4_168963665_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115751 | chr4_168963673_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115752 | chr4_168963674_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115753 | chr4_168963683_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115754 | chr4_168963697_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115755 | chr4_168963712_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115756 | chr4_168990497_- | SINE | Alu | Name=AluJb |
| ADediting_1115757 | chr4_168990528_- | SINE | Alu | Name=AluJb |
| ADediting_1115758 | chr4_168990539_- | SINE | Alu | Name=AluJb |
| ADediting_1115759 | chr4_168990547_- | SINE | Alu | Name=AluJb |
| ADediting_1115760 | chr4_168990548_- | SINE | Alu | Name=AluJb |
| ADediting_1115761 | chr4_168990558_- | SINE | Alu | Name=AluJb |
| ADediting_1115762 | chr4_168990565_- | SINE | Alu | Name=AluJb |
| ADediting_1115763 | chr4_168990569_- | SINE | Alu | Name=AluJb |
| ADediting_1115764 | chr4_168990575_- | SINE | Alu | Name=AluJb |
| ADediting_1115765 | chr4_168990577_- | SINE | Alu | Name=AluJb |
| ADediting_1115766 | chr4_168990597_- | SINE | Alu | Name=AluJb |
| ADediting_1115767 | chr4_168990601_- | SINE | Alu | Name=AluJb |
| ADediting_1115768 | chr4_168990604_- | SINE | Alu | Name=AluJb |
| ADediting_1115769 | chr4_168990605_- | SINE | Alu | Name=AluJb |
| ADediting_1115770 | chr4_168990606_- | SINE | Alu | Name=AluJb |
| ADediting_1115771 | chr4_168990607_- | SINE | Alu | Name=AluJb |
| ADediting_1115772 | chr4_168990613_- | SINE | Alu | Name=AluJb |
| ADediting_1115773 | chr4_168990614_- | SINE | Alu | Name=AluJb |
| ADediting_1115774 | chr4_168990615_- | SINE | Alu | Name=AluJb |
| ADediting_1115775 | chr4_168990616_- | SINE | Alu | Name=AluJb |
| ADediting_1115776 | chr4_168990617_- | SINE | Alu | Name=AluJb |
| ADediting_1115777 | chr4_168990646_- | SINE | Alu | Name=AluJb |
| ADediting_1115778 | chr4_168990647_- | SINE | Alu | Name=AluJb |
| ADediting_1115779 | chr4_168990654_- | SINE | Alu | Name=AluJb |
| ADediting_1115780 | chr4_168990694_- | SINE | Alu | Name=AluJb |
| ADediting_1115781 | chr4_168990695_- | SINE | Alu | Name=AluJb |
| ADediting_1115782 | chr4_168990796_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115783 | chr4_168990808_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115784 | chr4_168990809_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115785 | chr4_168990810_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115786 | chr4_168990836_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115787 | chr4_168990890_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115788 | chr4_168990905_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115789 | chr4_168990906_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115790 | chr4_168990910_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115791 | chr4_168990930_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115792 | chr4_168990932_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115793 | chr4_168990942_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115794 | chr4_168990954_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115795 | chr4_168990967_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115796 | chr4_168990971_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115797 | chr4_168990978_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115798 | chr4_168990991_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115799 | chr4_168991007_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115800 | chr4_168991010_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115801 | chr4_168991028_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115802 | chr4_168991041_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115803 | chr4_168993303_- | SINE | Alu | Name=AluSx |
| ADediting_1115804 | chr4_168993322_- | SINE | Alu | Name=AluSx |
| ADediting_1115805 | chr4_168993349_- | SINE | Alu | Name=AluSx |
| ADediting_1115806 | chr4_168993367_- | SINE | Alu | Name=AluSx |
| ADediting_1115807 | chr4_168993448_- | SINE | Alu | Name=AluSx |
| ADediting_1115808 | chr4_168993500_- | SINE | Alu | Name=AluSx |
| ADediting_1115809 | chr4_168993502_- | SINE | Alu | Name=AluSx |
| ADediting_1115810 | chr4_168994676_- | SINE | Alu | Name=AluSc8 |
| ADediting_1115811 | chr4_168994727_- | SINE | Alu | Name=AluSc8 |
| ADediting_1115812 | chr4_168994851_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115813 | chr4_168994852_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115814 | chr4_168994864_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115815 | chr4_168994870_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115816 | chr4_168994871_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115817 | chr4_168994886_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115818 | chr4_168994892_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115819 | chr4_168994987_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115820 | chr4_168995052_- | SINE | Alu | Name=AluSq2 |
| ADediting_1115821 | chr4_168997470_- | SINE | Alu | Name=AluJb |
| ADediting_1115822 | chr4_168997472_- | SINE | Alu | Name=AluJb |
| ADediting_1115823 | chr4_168997478_- | SINE | Alu | Name=AluJb |
| ADediting_1115824 | chr4_168997511_- | SINE | Alu | Name=AluJb |
| ADediting_1115825 | chr4_168997512_- | SINE | Alu | Name=AluJb |
| ADediting_1115826 | chr4_168997525_- | SINE | Alu | Name=AluJb |
| ADediting_1115827 | chr4_168997527_- | SINE | Alu | Name=AluJb |
| ADediting_1115828 | chr4_168997532_- | SINE | Alu | Name=AluJb |
| ADediting_1115829 | chr4_168997537_- | SINE | Alu | Name=AluJb |
| ADediting_1115830 | chr4_168997548_- | SINE | Alu | Name=AluJb |
| ADediting_1115831 | chr4_168997558_- | SINE | Alu | Name=AluJb |
| ADediting_1115832 | chr4_168997561_- | SINE | Alu | Name=AluJb |
| ADediting_1115833 | chr4_169001099_- | SINE | Alu | Name=AluJr |
| ADediting_1115834 | chr4_169001123_- | SINE | Alu | Name=AluJr |
| ADediting_1115835 | chr4_169003392_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115836 | chr4_169003417_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115837 | chr4_169003421_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115838 | chr4_169003424_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115839 | chr4_169003425_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115840 | chr4_169003429_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115841 | chr4_169003435_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115842 | chr4_169003444_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115843 | chr4_169003448_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115844 | chr4_169003576_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115845 | chr4_169003577_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115846 | chr4_169003601_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115847 | chr4_169003643_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115848 | chr4_169003674_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115849 | chr4_169004401_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115850 | chr4_169004485_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115851 | chr4_169004492_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115852 | chr4_169004493_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115853 | chr4_169004500_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115854 | chr4_169004518_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115855 | chr4_169004526_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115856 | chr4_169004527_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115857 | chr4_169004570_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115858 | chr4_169004571_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115859 | chr4_169004582_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115860 | chr4_169004583_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115861 | chr4_169004586_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115862 | chr4_169004587_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115863 | chr4_169004588_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115864 | chr4_169004594_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115865 | chr4_169004598_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1115866 | chr4_169004626_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1576717 | chr4_168990489_- | SINE | Alu | Name=AluJb |
| ADediting_1576718 | chr4_168990545_- | SINE | Alu | Name=AluJb |
| ADediting_1576719 | chr4_168990552_- | SINE | Alu | Name=AluJb |
| ADediting_1576720 | chr4_168990672_- | SINE | Alu | Name=AluJb |
| ADediting_1576721 | chr4_168990678_- | SINE | Alu | Name=AluJb |
| ADediting_1576722 | chr4_168990686_- | SINE | Alu | Name=AluJb |
| ADediting_1576723 | chr4_168990689_- | SINE | Alu | Name=AluJb |
| ADediting_1576724 | chr4_168990919_- | SINE | Alu | Name=AluSq2 |
| ADediting_1576725 | chr4_168990972_- | SINE | Alu | Name=AluSq2 |
| ADediting_1576726 | chr4_168997460_- | SINE | Alu | Name=AluJb |
| ADediting_1576727 | chr4_169004525_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651016 | chr4_168941627_- | LINE | L1 | Name=L1PA8 |
| ADediting_1651017 | chr4_168941644_- | LINE | L1 | Name=L1PA8 |
| ADediting_1651018 | chr4_168941646_- | LINE | L1 | Name=L1PA8 |
| ADediting_1651019 | chr4_168941648_- | LINE | L1 | Name=L1PA8 |
| ADediting_1651020 | chr4_168941665_- | LINE | L1 | Name=L1PA8 |
| ADediting_1651021 | chr4_168941669_- | LINE | L1 | Name=L1PA8 |
| ADediting_1651022 | chr4_168941689_- | LINE | L1 | Name=L1PA8 |
| ADediting_1651023 | chr4_168941697_- | LINE | L1 | Name=L1PA8 |
| ADediting_1651024 | chr4_168990470_- | SINE | Alu | Name=AluJb |
| ADediting_1651025 | chr4_168997488_- | SINE | Alu | Name=AluJb |
| ADediting_1651026 | chr4_169003397_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651027 | chr4_169003447_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651028 | chr4_169003485_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651029 | chr4_169003517_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651030 | chr4_169003522_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651031 | chr4_169003524_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651032 | chr4_169003529_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651033 | chr4_169003530_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651034 | chr4_169003533_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651035 | chr4_169003534_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651036 | chr4_169003537_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651037 | chr4_169003545_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651038 | chr4_169003564_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651039 | chr4_169003573_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651040 | chr4_169003574_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651041 | chr4_169003575_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651042 | chr4_169003585_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651043 | chr4_169003593_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651044 | chr4_169003598_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651045 | chr4_169003613_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651046 | chr4_169003635_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651047 | chr4_169004389_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651048 | chr4_169004407_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651049 | chr4_169004424_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651050 | chr4_169004425_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651051 | chr4_169004429_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651052 | chr4_169004436_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651053 | chr4_169004439_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651054 | chr4_169004451_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651055 | chr4_169004452_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651056 | chr4_169004453_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651057 | chr4_169004459_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651058 | chr4_169004467_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651059 | chr4_169004474_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651060 | chr4_169004482_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651061 | chr4_169004487_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651062 | chr4_169004488_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651063 | chr4_169004491_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651064 | chr4_169004504_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651065 | chr4_169004505_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651066 | chr4_169004506_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651067 | chr4_169004508_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651068 | chr4_169004513_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651069 | chr4_169004529_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651070 | chr4_169004541_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651071 | chr4_169004543_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651072 | chr4_169004551_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651073 | chr4_169004563_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651074 | chr4_169004584_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651075 | chr4_169004619_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651076 | chr4_169004620_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651077 | chr4_169004623_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651078 | chr4_169004624_- | DNA | TcMar-Tigger | Name=Tigger1 |
| ADediting_1651079 | chr4_169004625_- | DNA | TcMar-Tigger | Name=Tigger1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for CBR4 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CBR4 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for CBR4 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for CBR4 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-589-3p | chr4 | 168988430 | 168988437 | 8mer-1a | 168988430 | 168988450 | 146 | -22.74 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-641 | chr4 | 168990001 | 168990008 | 8mer-1a | 168990001 | 168990027 | 155 | -16.99 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000145439.12 | ENST00000504480.5 | CBR4-202 | hsa-miR-641 | chr4 | 169001268 | 169001275 | 8mer-1a | 169001268 | 169001291 | 146 | -12.88 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-5585-3p | chr4 | 168988467 | 168988473 | 7mer-m8 | 168988466 | 168988488 | 146 | -17.54 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-5585-3p | chr4 | 168988936 | 168988942 | 7mer-m8 | 168988935 | 168988957 | 151 | -15.46 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-5581-3p | chr4 | 168987911 | 168987917 | 7mer-m8 | 168987910 | 168987930 | 146 | -15.34 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-4477b | chr4 | 168988783 | 168988790 | 8mer-1a | 168988783 | 168988803 | 153 | -9 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-4477b | chr4 | 168988783 | 168988790 | 8mer-1a | 168988783 | 168988803 | 153 | -9 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-381-3p | chr4 | 168989652 | 168989658 | 7mer-m8 | 168989651 | 168989674 | 149 | -9.77 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-381-3p | chr4 | 168989652 | 168989658 | 7mer-m8 | 168989651 | 168989674 | 149 | -9.77 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-641 | chr4 | 168989092 | 168989098 | 7mer-m8 | 168989091 | 168989114 | 150 | -10.46 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-556-3p | chr4 | 168988656 | 168988662 | 7mer-m8 | 168988655 | 168988677 | 147 | -12.43 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-556-3p | chr4 | 168988998 | 168989005 | 8mer-1a | 168988998 | 168989020 | 147 | -8.63 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-641 | chr4 | 168989092 | 168989098 | 7mer-m8 | 168989091 | 168989114 | 150 | -10.46 |
| ADediting_286380 | chr11_79422188_- | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-5579-3p | chr4 | 168988287 | 168988293 | 7mer-m8 | 168988286 | 168988307 | 154 | -12.81 |
| ADediting_291761 | chr11_93733708_- | ENSG00000145439.12 | ENST00000504480.5 | CBR4-202 | hsa-miR-1304-3p | chr4 | 169001626 | 169001633 | 8mer-1a | 169001626 | 169001647 | 152 | -19.77 |
| ADediting_291761 | chr11_93733708_- | ENSG00000145439.12 | ENST00000504561.1 | CBR4-203 | hsa-miR-1304-3p | chr4 | 169001626 | 169001633 | 8mer-1a | 169001626 | 169001647 | 152 | -19.77 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-4775 | chr4 | 168988778 | 168988784 | 7mer-m8 | 168988777 | 168988798 | 145 | -7.62 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-4775 | chr4 | 168988863 | 168988869 | 7mer-m8 | 168988862 | 168988888 | 148 | -7.11 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-4775 | chr4 | 168989208 | 168989215 | 8mer-1a | 168989208 | 168989229 | 151 | -7.39 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000145439.12 | ENST00000306193.8 | CBR4-201 | hsa-miR-4775 | chr4 | 168989686 | 168989692 | 7mer-m8 | 168989685 | 168989709 | 151 | -6.85 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for CBR4 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for CBR4 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1115716 | chr4_168958164_- | 0.123197247521552 | -0.0877363493670015 | 0.000419923969348264 | -0.199127996931988 | 8.36231789114727e-11 | 0.357982204566447 |
| DLPFC | ADediting_1115717 | chr4_168958181_- | 0.109526006567322 | -0.091071411674166 | 0.000293621709655937 | -0.204303273753003 | 5.72351338832007e-13 | 0.394221952094217 |
| DLPFC | ADediting_1115743 | chr4_168963563_- | 0.709757684422247 | -0.0212218416124497 | 0.0530913819785448 | -0.109964733078834 | 1.45333962463302e-14 | 0.418343991266547 |
| CER | ADediting_1115757 | chr4_168990528_- | 8.45940608824979e-06 | 0.354678409184849 | 0.000475059239498298 | 0.281870021442821 | 0.951484212274653 | -0.00500969084867536 |
| CER | ADediting_1115758 | chr4_168990539_- | 2.84219320711532e-05 | 0.334657607121533 | 0.00258496268915071 | 0.244331863184297 | 0.914901713047539 | 0.00879834457207736 |
| CER | ADediting_1115759 | chr4_168990547_- | 0.000180554178150709 | 0.301149731409348 | 0.00559752918462178 | 0.225178998437928 | 0.742996486018401 | -0.0269928564340382 |
| TCX | ADediting_1115759 | chr4_168990547_- | 0.804336660603235 | 0.0203962923536038 | 0.00311281677458283 | -0.239859273353196 | 7.94640827221979e-05 | 0.316514818983256 |
| CER | ADediting_1115762 | chr4_168990565_- | 8.45880260118797e-05 | 0.315374049840599 | 0.0036924502389412 | 0.235676972151358 | 0.484941578229702 | 0.0574557414006266 |
| CER | ADediting_1115764 | chr4_168990575_- | 0.000179233603500114 | 0.30129097702488 | 0.010494789311794 | 0.208392530207308 | 0.423206795269547 | -0.0658707575053613 |
| TCX | ADediting_1115764 | chr4_168990575_- | 0.936224385632336 | 0.00658833772339295 | 0.00729338359862259 | -0.21825584280804 | 5.29841640219424e-05 | 0.323804933079263 |
| TCX | ADediting_1115765 | chr4_168990577_- | 0.98216156636213 | 0.00184100604398904 | 0.00341871142626051 | -0.237572247587679 | 4.46393082549078e-05 | 0.326832249227418 |
| CER | ADediting_1115766 | chr4_168990597_- | 5.08595073663206e-05 | 0.324530786908118 | 0.00220718854349918 | 0.248073020228098 | 0.618186386919659 | -0.0410220453786733 |
| TCX | ADediting_1115767 | chr4_168990601_- | 0.49543673793012 | 0.0560848735879565 | 0.0666143895225015 | -0.150173047602708 | 2.43485416385863e-05 | 0.337290915471227 |
| CER | ADediting_1115771 | chr4_168990607_- | 5.0355287343621e-06 | 0.362849143382423 | 0.00142044351269474 | 0.258227775612048 | 0.263456079976535 | 0.0918808658654994 |
| DLPFC | ADediting_1115772 | chr4_168990613_- | 0.000462839387495541 | 0.197697898599637 | 0.398269774659082 | 0.0481432704862311 | 1.53006490165135e-17 | 0.458778628564815 |
| CER | ADediting_1115772 | chr4_168990613_- | 4.76098851564759e-06 | 0.363718858876985 | 0.000524431642889305 | 0.279820183888815 | 0.797738710402618 | -0.0210989164851082 |
| DLPFC | ADediting_1115773 | chr4_168990614_- | 0.00506305262082951 | 0.158829241845822 | 0.869646970528972 | 0.00935824796985649 | 5.77681540834261e-18 | 0.464110525099061 |
| CER | ADediting_1115773 | chr4_168990614_- | 3.84885744141697e-08 | 0.430428118524626 | 0.000361946556001369 | 0.287428747589615 | 0.20646092625259 | 0.103741940762406 |
| CER | ADediting_1115777 | chr4_168990646_- | 9.49493398991642e-08 | 0.418982792736595 | 1.37078200895054e-05 | 0.346867451139368 | 0.725281683171168 | -0.0289284010137143 |
| DLPFC | ADediting_1115783 | chr4_168990808_- | 2.8631279979749e-05 | 0.235247158255887 | 0.00268708066147857 | 0.169915339452763 | 1.64038933468447e-09 | 0.333944206812669 |
| TCX | ADediting_1115783 | chr4_168990808_- | 0.728455383758436 | -0.0285805023222439 | 0.0191984198481626 | -0.191029221402268 | 5.13642746510238e-05 | 0.324355800455564 |
| DLPFC | ADediting_1115784 | chr4_168990809_- | 2.26472567483503e-06 | 0.264806672757688 | 0.000373446039476585 | 0.200838919417883 | 2.44322209486232e-08 | 0.310174121967082 |
| DLPFC | ADediting_1115795 | chr4_168990967_- | 1.13647166924129e-05 | 0.246442883874008 | 0.0306913789046456 | 0.122770751066522 | 7.18946191671232e-15 | 0.422752376793773 |
| TCX | ADediting_1115795 | chr4_168990967_- | 0.392797189198253 | 0.0702757470637894 | 0.0837423190084372 | -0.141674770981185 | 0.00012056360613376 | 0.308815681379629 |
| DLPFC | ADediting_1115796 | chr4_168990971_- | 4.02789470682186e-05 | 0.230970225356849 | 0.0221222519367482 | 0.129938030378403 | 6.62865308948241e-14 | 0.408613271283746 |
| TCX | ADediting_1115796 | chr4_168990971_- | 0.441870002103373 | 0.063258052531195 | 0.0104991100032774 | -0.208381134812124 | 8.26446690538438e-10 | 0.474879214098033 |
| DLPFC | ADediting_1115797 | chr4_168990978_- | 4.04851931254524e-05 | 0.230905615706388 | 0.00867919405143049 | 0.148828301204689 | 6.44079750287955e-10 | 0.341717265185983 |
| TCX | ADediting_1115797 | chr4_168990978_- | 0.680558740898127 | 0.0338890680706639 | 0.0967115895423807 | -0.136127537961542 | 1.69543650131885e-05 | 0.343360774708916 |
| DLPFC | ADediting_1115798 | chr4_168990991_- | 0.000140204179591031 | 0.214610723625003 | 0.013811743538295 | 0.139717034454807 | 1.66824510828934e-09 | 0.3338021979794 |
| CER | ADediting_1115798 | chr4_168990991_- | 2.12271018156588e-06 | 0.375976694068375 | 0.000119186069524663 | 0.309030766049519 | 0.693925808281383 | -0.0323943983333143 |
| TCX | ADediting_1115798 | chr4_168990991_- | 0.724794892667922 | 0.0289818077555431 | 0.116168518195046 | -0.128819148589098 | 4.41250678575108e-05 | 0.327035774335136 |
| TCX | ADediting_1115824 | chr4_168997511_- | 0.119525389098162 | 0.127656922751903 | 0.530039948221771 | -0.0516694719154493 | 1.12392262168181e-06 | 0.385286306839049 |
| STG | ADediting_1115857 | chr4_169004570_- | 0.567033682189431 | -0.0633431037734972 | 0.115477627786316 | -0.173036614244122 | 0.00132311062430385 | 0.34470173077951 |
| STG | ADediting_1115858 | chr4_169004571_- | 0.585214296874568 | -0.0604005571687464 | 0.0504033200263503 | -0.214199225182466 | 0.00092353748418548 | 0.354933720748596 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 9.00280876909992e-42 | 0.67015087541063 | 1.43497497271239e-37 | 0.643063681929423 | 0.224248502675108 | 0.0692216920692461 |
| AC | 9.19623064596279e-84 | 0.883762554928036 | 3.47912644462833e-51 | 0.774252160021238 | 1.99899267673444e-19 | 0.528959557934182 |
| PCC | 2.89417210771405e-40 | 0.779583169207141 | 1.66544363996966e-43 | 0.798395642223706 | 0.000126935650636714 | 0.273777881090483 |
| CER | 7.57921565813065e-28 | 0.745358711691513 | 1.40521443045176e-11 | 0.515963795410133 | 0.0717171750052186 | 0.147472244703276 |
| TCX | 1.45873650673846e-36 | 0.812859318628741 | 5.8317539621198e-11 | 0.502225317384018 | 1.37827907432603e-05 | 0.34677799219206 |
| FP | 9.13410289229666e-28 | 0.702230717339676 | 3.8942147971865e-30 | 0.723498969252773 | 1.61204872715666e-05 | 0.317109038178569 |
| IFG | 0.000411032741624329 | 0.652202142885849 | 0.000127040099936489 | 0.691995718268667 | 0.505066595967993 | 0.139808367879665 |
| PG | 5.11550084865576e-59 | 0.872117549064709 | 6.18827761219932e-31 | 0.719374884219473 | 0.414612730986976 | 0.0601689863296366 |
| STG | 9.43430953571283e-15 | 0.721797824596121 | 8.94377975179515e-15 | 0.722224969891934 | 0.0728789914305819 | 0.196727022680093 |
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Relation with AD stages for CBR4 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| TCX | ADediting_1115762 | chr4_168990565_- | 0.00138980506310311 | 0.306617691212985 |
| TCX | ADediting_1115765 | chr4_168990577_- | 0.00140841059995962 | 0.306267410311856 |
| TCX | ADediting_1115796 | chr4_168990971_- | 0.000287790426169677 | 0.34538539729023 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| TCX | 0.000165254713063295 | 0.357923792377183 |
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RelatedDrugs for CBR4 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CBR4 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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