ADeditome: functional annotation of RNA A-to-I editing in AD

Gene summary for HAVCR2

Gene summary

Gene information	Gene symbol	HAVCR2
	Gene ID	84868
	Gene name	hepatitis A virus cellular receptor 2
	Synonyms	CD366\|HAVcr-2\|KIM-3\|SPTCL\|TIM3\|TIMD-3\|TIMD3\|Tim-3
	Cytomap	5q33.3
	Type of gene	protein-coding
	Description	hepatitis A virus cellular receptor 2T cell immunoglobulin mucin 3T-cell immunoglobulin and mucin domain-containing protein 3T-cell immunoglobulin mucin family member 3T-cell immunoglobulin mucin receptor 3T-cell membrane protein 3kidney injury mole
	Modification date	20200313
	UniProtAcc	Q8TDQ0,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
HAVCR2	GO:0032687	negative regulation of interferon-alpha production	26492563
HAVCR2	GO:0032689	negative regulation of interferon-gamma production	26492563
HAVCR2	GO:0032703	negative regulation of interleukin-2 production	26492563
HAVCR2	GO:0032712	negative regulation of interleukin-3 production	26492563
HAVCR2	GO:0060135	maternal process involved in female pregnancy	25578313
HAVCR2	GO:0071656	negative regulation of granulocyte colony-stimulating factor production	26492563
HAVCR2	GO:2001189	negative regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell	26492563

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RNA A-to-I events for HAVCR2

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_1182876(157086404, -), ADediting_1182877(157086405, -), ADediting_1182878(157086484, -), ADediting_1182879(157086548, -), ADediting_1182880(157087647, -), ADediting_1182881(157087843, -), ADediting_1182882(157090237, -), ADediting_1182883(157090250, -), ADediting_1182884(157090345, -), ADediting_1182885(157090351, -), ADediting_1182886(157090352, -), ADediting_1182887(157090353, -), ADediting_1182888(157090377, -), ADediting_1182889(157090415, -), ADediting_1182890(157090422, -), ADediting_1182891(157090447, -), ADediting_1182892(157090455, -), ADediting_1182893(157090479, -), ADediting_1182894(157090494, -), ADediting_1182895(157090508, -), ADediting_1182896(157090511, -), ADediting_1182897(157090610, -), ADediting_1182898(157090629, -), ADediting_1182899(157090634, -), ADediting_1182900(157090649, -), ADediting_1182901(157090650, -), ADediting_1182902(157090656, -), ADediting_1182903(157090658, -), ADediting_1182904(157092584, -), ADediting_1182905(157092587, -), ADediting_1182906(157092683, -), ADediting_1182907(157092719, -), ADediting_1182908(157093690, -), ADediting_1182909(157093773, -), ADediting_1182910(157093779, -), ADediting_1182911(157093782, -), ADediting_1182912(157093790, -), ADediting_1182913(157093823, -), ADediting_1182914(157093833, -), ADediting_1182915(157093863, -), ADediting_1182916(157094521, -), ADediting_1182917(157094586, -), ADediting_1182918(157094656, -), ADediting_1182920(157096733, -), ADediting_1182921(157096741, -), ADediting_1182922(157097692, -), ADediting_1182923(157097705, -), ADediting_1182924(157097724, -), ADediting_1182925(157097806, -), ADediting_1182926(157097864, -), ADediting_1182927(157097881, -), ADediting_1182928(157098162, -), ADediting_1182929(157098324, -), ADediting_1182930(157099804, -), ADediting_1182931(157099899, -), ADediting_1182932(157100852, -), ADediting_1182933(157101867, -), ADediting_1182934(157101882, -), ADediting_1182935(157101886, -), ADediting_1182936(157101890, -), ADediting_1182937(157102048, -), ADediting_1182938(157102061, -), ADediting_1182939(157102065, -), ADediting_1182940(157102074, -), ADediting_1182941(157102077, -), ADediting_1182942(157102141, -), ADediting_1182943(157102142, -), ADediting_1182944(157102155, -), ADediting_1182945(157102164, -), ADediting_1182946(157102187, -), ADediting_1182947(157102188, -), ADediting_1182948(157102209, -), ADediting_1182949(157102216, -), ADediting_1182950(157102226, -), ADediting_1182951(157102293, -), ADediting_1182952(157102755, -), ADediting_1182953(157102769, -), ADediting_1182954(157102778, -), ADediting_1182955(157102811, -), ADediting_1182956(157102826, -), ADediting_1182957(157102835, -), ADediting_1182958(157102896, -), ADediting_1182959(157103119, -), ADediting_1182960(157103120, -), ADediting_1182961(157103249, -), ADediting_1182962(157103259, -), ADediting_1182963(157103263, -), ADediting_1182964(157103340, -), ADediting_1182979(157117347, -), ADediting_1182980(157117359, -), ADediting_1182981(157117360, -), ADediting_1182982(157117361, -), ADediting_1182983(157117382, -), ADediting_1182984(157117385, -), ADediting_1182985(157117862, -), ADediting_1182986(157117902, -), ADediting_1182987(157117976, -), ADediting_1182988(157117987, -), ADediting_1182989(157118023, -), ADediting_1182990(157118550, -), ADediting_1182991(157118561, -), ADediting_1182992(157118577, -), ADediting_1182993(157118773, -), ADediting_1182994(157118801, -), ADediting_1182995(157118877, -), ADediting_1182996(157118963, -), ADediting_1182997(157118971, -), ADediting_1182998(157118976, -), ADediting_1182999(157124544, -), ADediting_1183000(157125827, -), ADediting_1183001(157127135, -), ADediting_1183002(157127196, -), ADediting_1183003(157127249, -), ADediting_1183004(157127871, -), ADediting_1183005(157127898, -), ADediting_1183006(157128032, -), ADediting_1183007(157128033, -), ADediting_1183008(157128783, -), ADediting_1183009(157129192, -), ADediting_1183010(157129218, -), ADediting_1183011(157129342, -), ADediting_1183012(157129355, -), ADediting_1183013(157130298, -), ADediting_1183014(157130299, -), ADediting_1183015(157130304, -), ADediting_1183029(157131488, -), ADediting_1183030(157131493, -), ADediting_1183046(157133399, -), ADediting_1183047(157133422, -), ADediting_1183050(157133790, -), ADediting_1183051(157133794, -), ADediting_1183052(157133796, -), ADediting_1183053(157133833, -), ADediting_1183054(157133850, -), ADediting_1183055(157133853, -), ADediting_1183056(157133858, -), ADediting_1183057(157133863, -), ADediting_1183058(157133869, -), ADediting_1183059(157133875, -), ADediting_1183060(157133884, -), ADediting_1183061(157133893, -), ADediting_1183062(157133907, -), ADediting_1183063(157133928, -), ADediting_1183064(157133937, -), ADediting_1183065(157133939, -), ADediting_1183066(157133942, -), ADediting_1183067(157133959, -), ADediting_1183068(157133961, -), ADediting_1183069(157133963, -), ADediting_1183070(157133964, -), ADediting_1183071(157133973, -), ADediting_1183072(157133978, -), ADediting_1183073(157133984, -), ADediting_1183074(157133997, -), ADediting_1183075(157134003, -), ADediting_1183076(157134006, -), ADediting_1183077(157134015, -), ADediting_1183078(157134018, -), ADediting_1183079(157134037, -), ADediting_1183080(157134049, -), ADediting_1183081(157134053, -), ADediting_1183082(157134099, -), ADediting_1183083(157134113, -), ADediting_1183084(157134115, -), ADediting_1183085(157134145, -), ADediting_1183086(157134148, -), ADediting_1183087(157134149, -), ADediting_1183088(157134161, -), ADediting_1183089(157134162, -), ADediting_1183090(157134163, -), ADediting_1183091(157134174, -), ADediting_1183092(157134183, -), ADediting_1183093(157134193, -), ADediting_1183094(157134200, -), ADediting_1183095(157134235, -), ADediting_1183096(157134251, -), ADediting_1183097(157134263, -), ADediting_1183098(157134264, -), ADediting_1183099(157134265, -), ADediting_1183100(157134282, -), ADediting_1183101(157134314, -), ADediting_1183102(157134323, -), ADediting_1183103(157134326, -), ADediting_1183104(157134333, -), ADediting_1183105(157134335, -), ADediting_1183106(157134340, -), ADediting_1183107(157134343, -), ADediting_1183108(157134358, -), ADediting_1183109(157134362, -), ADediting_1183110(157134374, -), ADediting_1183111(157134384, -), ADediting_1183112(157134394, -), ADediting_1183113(157134406, -), ADediting_1183114(157134419, -), ADediting_1183115(157134423, -), ADediting_1183116(157134424, -), ADediting_1183117(157134443, -), ADediting_1183118(157134459, -), ADediting_1183119(157134468, -), ADediting_1183120(157134473, -), ADediting_1183121(157134491, -), ADediting_1183122(157134497, -), ADediting_1183123(157135378, -), ADediting_1183124(157135416, -), ADediting_1183125(157135451, -), ADediting_1183126(157135452, -), ADediting_1183127(157135454, -), ADediting_1183128(157135458, -), ADediting_1183129(157135973, -), ADediting_1183130(157135982, -), ADediting_1183131(157136020, -), ADediting_1183132(157136046, -), ADediting_1183133(157136069, -), ADediting_1183134(157136651, -), ADediting_1183135(157136688, -), ADediting_1183136(157136697, -), ADediting_1183137(157136698, -), ADediting_1183138(157136708, -), ADediting_1183139(157136714, -), ADediting_1183140(157136724, -), ADediting_1183141(157136733, -), ADediting_1183142(157136736, -), ADediting_1183143(157136737, -), ADediting_1183144(157136739, -), ADediting_1183145(157136742, -), ADediting_1183146(157136753, -), ADediting_1183147(157136755, -), ADediting_1183148(157136756, -), ADediting_1183149(157136787, -), ADediting_1183150(157136832, -), ADediting_1183151(157136833, -), ADediting_1183152(157136841, -), ADediting_1183153(157137036, -), ADediting_1183154(157137040, -), ADediting_1183155(157137058, -), ADediting_1183156(157137070, -), ADediting_1183157(157137127, -), ADediting_1183158(157137131, -), ADediting_1183159(157137136, -), ADediting_1183160(157137137, -), ADediting_1183161(157137163, -), ADediting_1183162(157137168, -), ADediting_1183163(157137171, -), ADediting_1183164(157137175, -), ADediting_1183165(157137198, -), ADediting_1183166(157137224, -), ADediting_1183167(157137228, -), ADediting_1183168(157137269, -), ADediting_1183169(157137270, -), ADediting_1183170(157137278, -), ADediting_1580050(157086475, -), ADediting_1580051(157088129, -), ADediting_1580052(157116981, -), ADediting_1580053(157116983, -), ADediting_1580054(157116999, -), ADediting_1580055(157117046, -), ADediting_1580056(157117064, -), ADediting_1580057(157117069, -), ADediting_1580058(157117070, -), ADediting_1580059(157117072, -), ADediting_1580060(157117075, -), ADediting_1580061(157117867, -), ADediting_1580062(157117888, -), ADediting_1580063(157123536, -), ADediting_1580064(157124110, -), ADediting_1580065(157124137, -), ADediting_1580066(157124138, -), ADediting_1580067(157124141, -), ADediting_1580068(157124150, -), ADediting_1580069(157124151, -), ADediting_1580070(157124155, -), ADediting_1580071(157124169, -), ADediting_1580072(157124185, -), ADediting_1580073(157124186, -), ADediting_1580074(157124825, -), ADediting_1580075(157125093, -), ADediting_1580076(157125105, -), ADediting_1580077(157125106, -), ADediting_1580078(157125125, -), ADediting_1580079(157125595, -), ADediting_1580080(157125598, -), ADediting_1580081(157125620, -), ADediting_1580082(157125625, -), ADediting_1580083(157129557, -), ADediting_1580084(157129562, -), ADediting_1580085(157129575, -), ADediting_1580086(157129577, -), ADediting_1580087(157129582, -), ADediting_1580088(157129587, -), ADediting_1580089(157129621, -), ADediting_1580090(157133889, -), ADediting_1580091(157134039, -), ADediting_1580092(157134368, -), ADediting_1580093(157136617, -), ADediting_1580094(157136754, -), ADediting_1580095(157136761, -), ADediting_1580096(157137120, -), ADediting_1655621(157129542, -), ADediting_1655622(157129544, -),

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RNA editing positional annotations for HAVCR2 using Annovar

Protein coding RNA editing(s).

ADeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_1182876	chr5_157086404_-	UTR3
ADediting_1182877	chr5_157086405_-	UTR3
ADediting_1182878	chr5_157086484_-	UTR3
ADediting_1182879	chr5_157086548_-	UTR3
ADediting_1182880	chr5_157087647_-	intronic
ADediting_1182881	chr5_157087843_-	intronic
ADediting_1182882	chr5_157090237_-	intronic
ADediting_1182883	chr5_157090250_-	intronic
ADediting_1182884	chr5_157090345_-	intronic
ADediting_1182885	chr5_157090351_-	intronic
ADediting_1182886	chr5_157090352_-	intronic
ADediting_1182887	chr5_157090353_-	intronic
ADediting_1182888	chr5_157090377_-	intronic
ADediting_1182889	chr5_157090415_-	intronic
ADediting_1182890	chr5_157090422_-	intronic
ADediting_1182891	chr5_157090447_-	intronic
ADediting_1182892	chr5_157090455_-	intronic
ADediting_1182893	chr5_157090479_-	intronic
ADediting_1182894	chr5_157090494_-	intronic
ADediting_1182895	chr5_157090508_-	intronic
ADediting_1182896	chr5_157090511_-	intronic
ADediting_1182897	chr5_157090610_-	intronic
ADediting_1182898	chr5_157090629_-	intronic
ADediting_1182899	chr5_157090634_-	intronic
ADediting_1182900	chr5_157090649_-	intronic
ADediting_1182901	chr5_157090650_-	intronic
ADediting_1182902	chr5_157090656_-	intronic
ADediting_1182903	chr5_157090658_-	intronic
ADediting_1182904	chr5_157092584_-	intronic
ADediting_1182905	chr5_157092587_-	intronic
ADediting_1182906	chr5_157092683_-	intronic
ADediting_1182907	chr5_157092719_-	intronic
ADediting_1182908	chr5_157093690_-	intronic
ADediting_1182909	chr5_157093773_-	intronic
ADediting_1182910	chr5_157093779_-	intronic
ADediting_1182911	chr5_157093782_-	intronic
ADediting_1182912	chr5_157093790_-	intronic
ADediting_1182913	chr5_157093823_-	intronic
ADediting_1182914	chr5_157093833_-	intronic
ADediting_1182915	chr5_157093863_-	intronic
ADediting_1182916	chr5_157094521_-	intronic
ADediting_1182917	chr5_157094586_-	intronic
ADediting_1182918	chr5_157094656_-	intronic
ADediting_1182920	chr5_157096733_-	intronic
ADediting_1182921	chr5_157096741_-	intronic
ADediting_1182922	chr5_157097692_-	intronic
ADediting_1182923	chr5_157097705_-	intronic
ADediting_1182924	chr5_157097724_-	intronic
ADediting_1182925	chr5_157097806_-	intronic
ADediting_1182926	chr5_157097864_-	intronic
ADediting_1182927	chr5_157097881_-	intronic
ADediting_1182928	chr5_157098162_-	intronic
ADediting_1182929	chr5_157098324_-	intronic
ADediting_1182930	chr5_157099804_-	intronic
ADediting_1182931	chr5_157099899_-	intronic
ADediting_1182932	chr5_157100852_-	intronic
ADediting_1182933	chr5_157101867_-	intronic
ADediting_1182934	chr5_157101882_-	intronic
ADediting_1182935	chr5_157101886_-	intronic
ADediting_1182936	chr5_157101890_-	intronic
ADediting_1182937	chr5_157102048_-	intronic
ADediting_1182938	chr5_157102061_-	intronic
ADediting_1182939	chr5_157102065_-	intronic
ADediting_1182940	chr5_157102074_-	intronic
ADediting_1182941	chr5_157102077_-	intronic
ADediting_1182942	chr5_157102141_-	intronic
ADediting_1182943	chr5_157102142_-	intronic
ADediting_1182944	chr5_157102155_-	intronic
ADediting_1182945	chr5_157102164_-	intronic
ADediting_1182946	chr5_157102187_-	intronic
ADediting_1182947	chr5_157102188_-	intronic
ADediting_1182948	chr5_157102209_-	intronic
ADediting_1182949	chr5_157102216_-	intronic
ADediting_1182950	chr5_157102226_-	intronic
ADediting_1182951	chr5_157102293_-	intronic
ADediting_1182952	chr5_157102755_-	intronic
ADediting_1182953	chr5_157102769_-	intronic
ADediting_1182954	chr5_157102778_-	intronic
ADediting_1182955	chr5_157102811_-	intronic
ADediting_1182956	chr5_157102826_-	intronic
ADediting_1182957	chr5_157102835_-	intronic
ADediting_1182958	chr5_157102896_-	intronic
ADediting_1182959	chr5_157103119_-	intronic
ADediting_1182960	chr5_157103120_-	intronic
ADediting_1182961	chr5_157103249_-	intronic
ADediting_1182962	chr5_157103259_-	intronic
ADediting_1182963	chr5_157103263_-	intronic
ADediting_1182964	chr5_157103340_-	intronic
ADediting_1182979	chr5_157117347_-	intronic
ADediting_1182980	chr5_157117359_-	intronic
ADediting_1182981	chr5_157117360_-	intronic
ADediting_1182982	chr5_157117361_-	intronic
ADediting_1182983	chr5_157117382_-	intronic
ADediting_1182984	chr5_157117385_-	intronic
ADediting_1182985	chr5_157117862_-	intronic
ADediting_1182986	chr5_157117902_-	intronic
ADediting_1182987	chr5_157117976_-	intronic
ADediting_1182988	chr5_157117987_-	intronic
ADediting_1182989	chr5_157118023_-	intronic
ADediting_1182990	chr5_157118550_-	intronic
ADediting_1182991	chr5_157118561_-	intronic
ADediting_1182992	chr5_157118577_-	intronic
ADediting_1182993	chr5_157118773_-	intronic
ADediting_1182994	chr5_157118801_-	intronic
ADediting_1182995	chr5_157118877_-	intronic
ADediting_1182996	chr5_157118963_-	intronic
ADediting_1182997	chr5_157118971_-	intronic
ADediting_1182998	chr5_157118976_-	intronic
ADediting_1182999	chr5_157124544_-	intronic
ADediting_1183000	chr5_157125827_-	intronic
ADediting_1183001	chr5_157127135_-	intronic
ADediting_1183002	chr5_157127196_-	intronic
ADediting_1183003	chr5_157127249_-	intronic
ADediting_1183004	chr5_157127871_-	intronic
ADediting_1183005	chr5_157127898_-	intronic
ADediting_1183006	chr5_157128032_-	intronic
ADediting_1183007	chr5_157128033_-	intronic
ADediting_1183008	chr5_157128783_-	intronic
ADediting_1183009	chr5_157129192_-	intronic
ADediting_1183010	chr5_157129218_-	intronic
ADediting_1183011	chr5_157129342_-	intronic
ADediting_1183012	chr5_157129355_-	intronic
ADediting_1183013	chr5_157130298_-	intronic
ADediting_1183014	chr5_157130299_-	intronic
ADediting_1183015	chr5_157130304_-	intronic
ADediting_1183029	chr5_157131488_-	intronic
ADediting_1183030	chr5_157131493_-	intronic
ADediting_1183046	chr5_157133399_-	intronic
ADediting_1183047	chr5_157133422_-	intronic
ADediting_1183050	chr5_157133790_-	intronic
ADediting_1183051	chr5_157133794_-	intronic
ADediting_1183052	chr5_157133796_-	intronic
ADediting_1183053	chr5_157133833_-	intronic
ADediting_1183054	chr5_157133850_-	intronic
ADediting_1183055	chr5_157133853_-	intronic
ADediting_1183056	chr5_157133858_-	intronic
ADediting_1183057	chr5_157133863_-	intronic
ADediting_1183058	chr5_157133869_-	intronic
ADediting_1183059	chr5_157133875_-	intronic
ADediting_1183060	chr5_157133884_-	intronic
ADediting_1183061	chr5_157133893_-	intronic
ADediting_1183062	chr5_157133907_-	intronic
ADediting_1183063	chr5_157133928_-	intronic
ADediting_1183064	chr5_157133937_-	intronic
ADediting_1183065	chr5_157133939_-	intronic
ADediting_1183066	chr5_157133942_-	intronic
ADediting_1183067	chr5_157133959_-	intronic
ADediting_1183068	chr5_157133961_-	intronic
ADediting_1183069	chr5_157133963_-	intronic
ADediting_1183070	chr5_157133964_-	intronic
ADediting_1183071	chr5_157133973_-	intronic
ADediting_1183072	chr5_157133978_-	intronic
ADediting_1183073	chr5_157133984_-	intronic
ADediting_1183074	chr5_157133997_-	intronic
ADediting_1183075	chr5_157134003_-	intronic
ADediting_1183076	chr5_157134006_-	intronic
ADediting_1183077	chr5_157134015_-	intronic
ADediting_1183078	chr5_157134018_-	intronic
ADediting_1183079	chr5_157134037_-	intronic
ADediting_1183080	chr5_157134049_-	intronic
ADediting_1183081	chr5_157134053_-	intronic
ADediting_1183082	chr5_157134099_-	intronic
ADediting_1183083	chr5_157134113_-	intronic
ADediting_1183084	chr5_157134115_-	intronic
ADediting_1183085	chr5_157134145_-	intronic
ADediting_1183086	chr5_157134148_-	intronic
ADediting_1183087	chr5_157134149_-	intronic
ADediting_1183088	chr5_157134161_-	intronic
ADediting_1183089	chr5_157134162_-	intronic
ADediting_1183090	chr5_157134163_-	intronic
ADediting_1183091	chr5_157134174_-	intronic
ADediting_1183092	chr5_157134183_-	intronic
ADediting_1183093	chr5_157134193_-	intronic
ADediting_1183094	chr5_157134200_-	intronic
ADediting_1183095	chr5_157134235_-	intronic
ADediting_1183096	chr5_157134251_-	intronic
ADediting_1183097	chr5_157134263_-	intronic
ADediting_1183098	chr5_157134264_-	intronic
ADediting_1183099	chr5_157134265_-	intronic
ADediting_1183100	chr5_157134282_-	intronic
ADediting_1183101	chr5_157134314_-	intronic
ADediting_1183102	chr5_157134323_-	intronic
ADediting_1183103	chr5_157134326_-	intronic
ADediting_1183104	chr5_157134333_-	intronic
ADediting_1183105	chr5_157134335_-	intronic
ADediting_1183106	chr5_157134340_-	intronic
ADediting_1183107	chr5_157134343_-	intronic
ADediting_1183108	chr5_157134358_-	intronic
ADediting_1183109	chr5_157134362_-	intronic
ADediting_1183110	chr5_157134374_-	intronic
ADediting_1183111	chr5_157134384_-	intronic
ADediting_1183112	chr5_157134394_-	intronic
ADediting_1183113	chr5_157134406_-	intronic
ADediting_1183114	chr5_157134419_-	intronic
ADediting_1183115	chr5_157134423_-	intronic
ADediting_1183116	chr5_157134424_-	intronic
ADediting_1183117	chr5_157134443_-	intronic
ADediting_1183118	chr5_157134459_-	intronic
ADediting_1183119	chr5_157134468_-	intronic
ADediting_1183120	chr5_157134473_-	intronic
ADediting_1183121	chr5_157134491_-	intronic
ADediting_1183122	chr5_157134497_-	intronic
ADediting_1183123	chr5_157135378_-	intronic
ADediting_1183124	chr5_157135416_-	intronic
ADediting_1183125	chr5_157135451_-	intronic
ADediting_1183126	chr5_157135452_-	intronic
ADediting_1183127	chr5_157135454_-	intronic
ADediting_1183128	chr5_157135458_-	intronic
ADediting_1183129	chr5_157135973_-	intronic
ADediting_1183130	chr5_157135982_-	intronic
ADediting_1183131	chr5_157136020_-	intronic
ADediting_1183132	chr5_157136046_-	intronic
ADediting_1183133	chr5_157136069_-	intronic
ADediting_1183134	chr5_157136651_-	intronic
ADediting_1183135	chr5_157136688_-	intronic
ADediting_1183136	chr5_157136697_-	intronic
ADediting_1183137	chr5_157136698_-	intronic
ADediting_1183138	chr5_157136708_-	intronic
ADediting_1183139	chr5_157136714_-	intronic
ADediting_1183140	chr5_157136724_-	intronic
ADediting_1183141	chr5_157136733_-	intronic
ADediting_1183142	chr5_157136736_-	intronic
ADediting_1183143	chr5_157136737_-	intronic
ADediting_1183144	chr5_157136739_-	intronic
ADediting_1183145	chr5_157136742_-	intronic
ADediting_1183146	chr5_157136753_-	intronic
ADediting_1183147	chr5_157136755_-	intronic
ADediting_1183148	chr5_157136756_-	intronic
ADediting_1183149	chr5_157136787_-	intronic
ADediting_1183150	chr5_157136832_-	intronic
ADediting_1183151	chr5_157136833_-	intronic
ADediting_1183152	chr5_157136841_-	intronic
ADediting_1183153	chr5_157137036_-	intronic
ADediting_1183154	chr5_157137040_-	intronic
ADediting_1183155	chr5_157137058_-	intronic
ADediting_1183156	chr5_157137070_-	intronic
ADediting_1183157	chr5_157137127_-	intronic
ADediting_1183158	chr5_157137131_-	intronic
ADediting_1183159	chr5_157137136_-	intronic
ADediting_1183160	chr5_157137137_-	intronic
ADediting_1183161	chr5_157137163_-	intronic
ADediting_1183162	chr5_157137168_-	intronic
ADediting_1183163	chr5_157137171_-	intronic
ADediting_1183164	chr5_157137175_-	intronic
ADediting_1183165	chr5_157137198_-	intronic
ADediting_1183166	chr5_157137224_-	intronic
ADediting_1183167	chr5_157137228_-	intronic
ADediting_1183168	chr5_157137269_-	intronic
ADediting_1183169	chr5_157137270_-	intronic
ADediting_1183170	chr5_157137278_-	intronic
ADediting_1580050	chr5_157086475_-	UTR3
ADediting_1580051	chr5_157088129_-	intronic
ADediting_1580052	chr5_157116981_-	intronic
ADediting_1580053	chr5_157116983_-	intronic
ADediting_1580054	chr5_157116999_-	intronic
ADediting_1580055	chr5_157117046_-	intronic
ADediting_1580056	chr5_157117064_-	intronic
ADediting_1580057	chr5_157117069_-	intronic
ADediting_1580058	chr5_157117070_-	intronic
ADediting_1580059	chr5_157117072_-	intronic
ADediting_1580060	chr5_157117075_-	intronic
ADediting_1580061	chr5_157117867_-	intronic
ADediting_1580062	chr5_157117888_-	intronic
ADediting_1580063	chr5_157123536_-	intronic
ADediting_1580064	chr5_157124110_-	intronic
ADediting_1580065	chr5_157124137_-	intronic
ADediting_1580066	chr5_157124138_-	intronic
ADediting_1580067	chr5_157124141_-	intronic
ADediting_1580068	chr5_157124150_-	intronic
ADediting_1580069	chr5_157124151_-	intronic
ADediting_1580070	chr5_157124155_-	intronic
ADediting_1580071	chr5_157124169_-	intronic
ADediting_1580072	chr5_157124185_-	intronic
ADediting_1580073	chr5_157124186_-	intronic
ADediting_1580074	chr5_157124825_-	intronic
ADediting_1580075	chr5_157125093_-	intronic
ADediting_1580076	chr5_157125105_-	intronic
ADediting_1580077	chr5_157125106_-	intronic
ADediting_1580078	chr5_157125125_-	intronic
ADediting_1580079	chr5_157125595_-	intronic
ADediting_1580080	chr5_157125598_-	intronic
ADediting_1580081	chr5_157125620_-	intronic
ADediting_1580082	chr5_157125625_-	intronic
ADediting_1580083	chr5_157129557_-	intronic
ADediting_1580084	chr5_157129562_-	intronic
ADediting_1580085	chr5_157129575_-	intronic
ADediting_1580086	chr5_157129577_-	intronic
ADediting_1580087	chr5_157129582_-	intronic
ADediting_1580088	chr5_157129587_-	intronic
ADediting_1580089	chr5_157129621_-	intronic
ADediting_1580090	chr5_157133889_-	intronic
ADediting_1580091	chr5_157134039_-	intronic
ADediting_1580092	chr5_157134368_-	intronic
ADediting_1580093	chr5_157136617_-	intronic
ADediting_1580094	chr5_157136754_-	intronic
ADediting_1580095	chr5_157136761_-	intronic
ADediting_1580096	chr5_157137120_-	intronic
ADediting_1655621	chr5_157129542_-	intronic
ADediting_1655622	chr5_157129544_-	intronic

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_1182876	chr5_157086404_-	SINE	Alu	Name=AluSg
ADediting_1182877	chr5_157086405_-	SINE	Alu	Name=AluSg
ADediting_1182878	chr5_157086484_-	SINE	Alu	Name=AluSg
ADediting_1182879	chr5_157086548_-	SINE	Alu	Name=AluSg
ADediting_1182880	chr5_157087647_-	SINE	Alu	Name=AluSx3
ADediting_1182881	chr5_157087843_-	SINE	Alu	Name=AluSx3
ADediting_1182882	chr5_157090237_-	SINE	Alu	Name=AluJr
ADediting_1182883	chr5_157090250_-	SINE	Alu	Name=AluJr
ADediting_1182884	chr5_157090345_-	SINE	Alu	Name=AluJb
ADediting_1182885	chr5_157090351_-	SINE	Alu	Name=AluJb
ADediting_1182886	chr5_157090352_-	SINE	Alu	Name=AluJb
ADediting_1182887	chr5_157090353_-	SINE	Alu	Name=AluJb
ADediting_1182888	chr5_157090377_-	SINE	Alu	Name=AluJb
ADediting_1182889	chr5_157090415_-	SINE	Alu	Name=AluJb
ADediting_1182890	chr5_157090422_-	SINE	Alu	Name=AluJb
ADediting_1182891	chr5_157090447_-	SINE	Alu	Name=AluJb
ADediting_1182892	chr5_157090455_-	SINE	Alu	Name=AluJb
ADediting_1182893	chr5_157090479_-	SINE	Alu	Name=AluJb
ADediting_1182894	chr5_157090494_-	SINE	Alu	Name=AluJb
ADediting_1182895	chr5_157090508_-	SINE	Alu	Name=AluJb
ADediting_1182896	chr5_157090511_-	SINE	Alu	Name=AluJb
ADediting_1182897	chr5_157090610_-	SINE	Alu	Name=AluJr
ADediting_1182898	chr5_157090629_-	SINE	Alu	Name=AluJr
ADediting_1182899	chr5_157090634_-	SINE	Alu	Name=AluJr
ADediting_1182900	chr5_157090649_-	SINE	Alu	Name=AluJr
ADediting_1182901	chr5_157090650_-	SINE	Alu	Name=AluJr
ADediting_1182902	chr5_157090656_-	SINE	Alu	Name=AluJr
ADediting_1182903	chr5_157090658_-	SINE	Alu	Name=AluJr
ADediting_1182904	chr5_157092584_-	SINE	Alu	Name=AluSp
ADediting_1182905	chr5_157092587_-	SINE	Alu	Name=AluSp
ADediting_1182906	chr5_157092683_-	SINE	Alu	Name=AluSp
ADediting_1182907	chr5_157092719_-	SINE	Alu	Name=AluSp
ADediting_1182908	chr5_157093690_-	SINE	Alu	Name=AluSc
ADediting_1182909	chr5_157093773_-	SINE	Alu	Name=AluSc
ADediting_1182910	chr5_157093779_-	SINE	Alu	Name=AluSc
ADediting_1182911	chr5_157093782_-	SINE	Alu	Name=AluSc
ADediting_1182912	chr5_157093790_-	SINE	Alu	Name=AluSc
ADediting_1182913	chr5_157093823_-	SINE	Alu	Name=AluSc
ADediting_1182914	chr5_157093833_-	SINE	Alu	Name=AluSc
ADediting_1182915	chr5_157093863_-	SINE	Alu	Name=AluSc
ADediting_1182916	chr5_157094521_-	SINE	Alu	Name=AluSz
ADediting_1182917	chr5_157094586_-	SINE	Alu	Name=AluSz
ADediting_1182918	chr5_157094656_-	SINE	Alu	Name=AluSz
ADediting_1182920	chr5_157096733_-	SINE	Alu	Name=AluSq2
ADediting_1182921	chr5_157096741_-	SINE	Alu	Name=AluSq2
ADediting_1182922	chr5_157097692_-	SINE	Alu	Name=AluSq
ADediting_1182923	chr5_157097705_-	SINE	Alu	Name=AluSq
ADediting_1182924	chr5_157097724_-	SINE	Alu	Name=AluSq
ADediting_1182925	chr5_157097806_-	SINE	Alu	Name=AluSq
ADediting_1182926	chr5_157097864_-	SINE	Alu	Name=AluSq
ADediting_1182927	chr5_157097881_-	SINE	Alu	Name=AluSq
ADediting_1182928	chr5_157098162_-	SINE	Alu	Name=AluSq2
ADediting_1182929	chr5_157098324_-	SINE	Alu	Name=AluSq2
ADediting_1182930	chr5_157099804_-	SINE	Alu	Name=AluSz
ADediting_1182931	chr5_157099899_-	SINE	Alu	Name=AluSz
ADediting_1182932	chr5_157100852_-	SINE	Alu	Name=AluSc
ADediting_1182933	chr5_157101867_-	SINE	Alu	Name=AluJb
ADediting_1182934	chr5_157101882_-	SINE	Alu	Name=AluJb
ADediting_1182935	chr5_157101886_-	SINE	Alu	Name=AluJb
ADediting_1182936	chr5_157101890_-	SINE	Alu	Name=AluJb
ADediting_1182937	chr5_157102048_-	SINE	Alu	Name=AluSx
ADediting_1182938	chr5_157102061_-	SINE	Alu	Name=AluSx
ADediting_1182939	chr5_157102065_-	SINE	Alu	Name=AluSx
ADediting_1182940	chr5_157102074_-	SINE	Alu	Name=AluSx
ADediting_1182941	chr5_157102077_-	SINE	Alu	Name=AluSx
ADediting_1182942	chr5_157102141_-	SINE	Alu	Name=AluSx
ADediting_1182943	chr5_157102142_-	SINE	Alu	Name=AluSx
ADediting_1182944	chr5_157102155_-	SINE	Alu	Name=AluSx
ADediting_1182945	chr5_157102164_-	SINE	Alu	Name=AluSx
ADediting_1182946	chr5_157102187_-	SINE	Alu	Name=AluSx
ADediting_1182947	chr5_157102188_-	SINE	Alu	Name=AluSx
ADediting_1182948	chr5_157102209_-	SINE	Alu	Name=AluSx
ADediting_1182949	chr5_157102216_-	SINE	Alu	Name=AluSx
ADediting_1182950	chr5_157102226_-	SINE	Alu	Name=AluSx
ADediting_1182951	chr5_157102293_-	SINE	Alu	Name=AluJb
ADediting_1182952	chr5_157102755_-	SINE	Alu	Name=AluSx
ADediting_1182953	chr5_157102769_-	SINE	Alu	Name=AluSx
ADediting_1182954	chr5_157102778_-	SINE	Alu	Name=AluSx
ADediting_1182955	chr5_157102811_-	SINE	Alu	Name=AluSx
ADediting_1182956	chr5_157102826_-	SINE	Alu	Name=AluSx
ADediting_1182957	chr5_157102835_-	SINE	Alu	Name=AluSx
ADediting_1182958	chr5_157102896_-	SINE	Alu	Name=AluSx
ADediting_1182959	chr5_157103119_-	SINE	Alu	Name=AluY
ADediting_1182960	chr5_157103120_-	SINE	Alu	Name=AluY
ADediting_1182961	chr5_157103249_-	SINE	Alu	Name=AluY
ADediting_1182962	chr5_157103259_-	SINE	Alu	Name=AluY
ADediting_1182963	chr5_157103263_-	SINE	Alu	Name=AluY
ADediting_1182964	chr5_157103340_-	SINE	Alu	Name=AluY
ADediting_1182979	chr5_157117347_-	SINE	Alu	Name=FLAM_C
ADediting_1182980	chr5_157117359_-	SINE	Alu	Name=FLAM_C
ADediting_1182981	chr5_157117360_-	SINE	Alu	Name=FLAM_C
ADediting_1182982	chr5_157117361_-	SINE	Alu	Name=FLAM_C
ADediting_1182983	chr5_157117382_-	SINE	Alu	Name=FLAM_C
ADediting_1182984	chr5_157117385_-	SINE	Alu	Name=FLAM_C
ADediting_1182985	chr5_157117862_-	SINE	Alu	Name=AluSx
ADediting_1182986	chr5_157117902_-	SINE	Alu	Name=AluSx
ADediting_1182987	chr5_157117976_-	SINE	Alu	Name=AluSx
ADediting_1182988	chr5_157117987_-	SINE	Alu	Name=AluSx
ADediting_1182989	chr5_157118023_-	SINE	Alu	Name=AluSx
ADediting_1182990	chr5_157118550_-	SINE	Alu	Name=AluSx
ADediting_1182991	chr5_157118561_-	SINE	Alu	Name=AluSx
ADediting_1182992	chr5_157118577_-	SINE	Alu	Name=AluSx
ADediting_1182993	chr5_157118773_-	SINE	Alu	Name=AluSx1
ADediting_1182994	chr5_157118801_-	SINE	Alu	Name=AluSx1
ADediting_1182995	chr5_157118877_-	SINE	Alu	Name=AluSx1
ADediting_1182996	chr5_157118963_-	SINE	Alu	Name=AluSx1
ADediting_1182997	chr5_157118971_-	SINE	Alu	Name=AluSx1
ADediting_1182998	chr5_157118976_-	SINE	Alu	Name=AluSx1
ADediting_1182999	chr5_157124544_-	SINE	Alu	Name=AluSx
ADediting_1183000	chr5_157125827_-	SINE	Alu	Name=AluSx1
ADediting_1183001	chr5_157127135_-	SINE	Alu	Name=AluJr
ADediting_1183002	chr5_157127196_-	SINE	Alu	Name=AluJr
ADediting_1183003	chr5_157127249_-	SINE	Alu	Name=AluJr
ADediting_1183004	chr5_157127871_-	SINE	Alu	Name=AluYj4
ADediting_1183005	chr5_157127898_-	SINE	Alu	Name=AluYj4
ADediting_1183006	chr5_157128032_-	SINE	Alu	Name=AluYj4
ADediting_1183007	chr5_157128033_-	SINE	Alu	Name=AluYj4
ADediting_1183008	chr5_157128783_-	SINE	Alu	Name=AluSx
ADediting_1183009	chr5_157129192_-	SINE	Alu	Name=AluSq2
ADediting_1183010	chr5_157129218_-	SINE	Alu	Name=AluSq2
ADediting_1183011	chr5_157129342_-	SINE	Alu	Name=AluSq2
ADediting_1183012	chr5_157129355_-	SINE	Alu	Name=AluSq2
ADediting_1183013	chr5_157130298_-	SINE	Alu	Name=AluSz6
ADediting_1183014	chr5_157130299_-	SINE	Alu	Name=AluSz6
ADediting_1183015	chr5_157130304_-	SINE	Alu	Name=AluSz6
ADediting_1183029	chr5_157131488_-	SINE	Alu	Name=AluSp
ADediting_1183030	chr5_157131493_-	SINE	Alu	Name=AluSp
ADediting_1183046	chr5_157133399_-	SINE	MIR	Name=MIRb
ADediting_1183047	chr5_157133422_-	SINE	MIR	Name=MIRb
ADediting_1183050	chr5_157133790_-	SINE	Alu	Name=AluJo
ADediting_1183051	chr5_157133794_-	SINE	Alu	Name=AluJo
ADediting_1183052	chr5_157133796_-	SINE	Alu	Name=AluJo
ADediting_1183053	chr5_157133833_-	SINE	Alu	Name=AluJo
ADediting_1183054	chr5_157133850_-	SINE	Alu	Name=AluJo
ADediting_1183055	chr5_157133853_-	SINE	Alu	Name=AluJo
ADediting_1183056	chr5_157133858_-	SINE	Alu	Name=AluJo
ADediting_1183057	chr5_157133863_-	SINE	Alu	Name=AluJo
ADediting_1183058	chr5_157133869_-	SINE	Alu	Name=AluJo
ADediting_1183059	chr5_157133875_-	SINE	Alu	Name=AluJo
ADediting_1183060	chr5_157133884_-	SINE	Alu	Name=AluJo
ADediting_1183061	chr5_157133893_-	SINE	Alu	Name=AluJo
ADediting_1183062	chr5_157133907_-	SINE	Alu	Name=AluJo
ADediting_1183063	chr5_157133928_-	SINE	Alu	Name=AluJo
ADediting_1183064	chr5_157133937_-	SINE	Alu	Name=AluJo
ADediting_1183065	chr5_157133939_-	SINE	Alu	Name=AluJo
ADediting_1183066	chr5_157133942_-	SINE	Alu	Name=AluJo
ADediting_1183067	chr5_157133959_-	SINE	Alu	Name=AluJo
ADediting_1183068	chr5_157133961_-	SINE	Alu	Name=AluJo
ADediting_1183069	chr5_157133963_-	SINE	Alu	Name=AluJo
ADediting_1183070	chr5_157133964_-	SINE	Alu	Name=AluJo
ADediting_1183071	chr5_157133973_-	SINE	Alu	Name=AluJo
ADediting_1183072	chr5_157133978_-	SINE	Alu	Name=AluJo
ADediting_1183073	chr5_157133984_-	SINE	Alu	Name=AluJo
ADediting_1183074	chr5_157133997_-	SINE	Alu	Name=AluJo
ADediting_1183075	chr5_157134003_-	SINE	Alu	Name=AluJo
ADediting_1183076	chr5_157134006_-	SINE	Alu	Name=AluJo
ADediting_1183077	chr5_157134015_-	SINE	Alu	Name=AluJo
ADediting_1183078	chr5_157134018_-	SINE	Alu	Name=AluJo
ADediting_1183079	chr5_157134037_-	SINE	Alu	Name=AluJo
ADediting_1183080	chr5_157134049_-	SINE	Alu	Name=AluJo
ADediting_1183081	chr5_157134053_-	SINE	Alu	Name=AluJo
ADediting_1183082	chr5_157134099_-	SINE	Alu	Name=FLAM_C
ADediting_1183083	chr5_157134113_-	SINE	Alu	Name=FLAM_C
ADediting_1183084	chr5_157134115_-	SINE	Alu	Name=FLAM_C
ADediting_1183085	chr5_157134145_-	SINE	Alu	Name=FLAM_C
ADediting_1183086	chr5_157134148_-	SINE	Alu	Name=FLAM_C
ADediting_1183087	chr5_157134149_-	SINE	Alu	Name=FLAM_C
ADediting_1183088	chr5_157134161_-	SINE	Alu	Name=FLAM_C
ADediting_1183089	chr5_157134162_-	SINE	Alu	Name=FLAM_C
ADediting_1183090	chr5_157134163_-	SINE	Alu	Name=FLAM_C
ADediting_1183091	chr5_157134174_-	SINE	Alu	Name=FLAM_C
ADediting_1183092	chr5_157134183_-	SINE	Alu	Name=FLAM_C
ADediting_1183093	chr5_157134193_-	SINE	Alu	Name=FLAM_C
ADediting_1183094	chr5_157134200_-	SINE	Alu	Name=FLAM_C
ADediting_1183095	chr5_157134235_-	SINE	Alu	Name=AluSc5
ADediting_1183096	chr5_157134251_-	SINE	Alu	Name=AluSc5
ADediting_1183097	chr5_157134263_-	SINE	Alu	Name=AluSc5
ADediting_1183098	chr5_157134264_-	SINE	Alu	Name=AluSc5
ADediting_1183099	chr5_157134265_-	SINE	Alu	Name=AluSc5
ADediting_1183100	chr5_157134282_-	SINE	Alu	Name=AluSc5
ADediting_1183101	chr5_157134314_-	SINE	Alu	Name=AluSc5
ADediting_1183102	chr5_157134323_-	SINE	Alu	Name=AluSc5
ADediting_1183103	chr5_157134326_-	SINE	Alu	Name=AluSc5
ADediting_1183104	chr5_157134333_-	SINE	Alu	Name=AluSc5
ADediting_1183105	chr5_157134335_-	SINE	Alu	Name=AluSc5
ADediting_1183106	chr5_157134340_-	SINE	Alu	Name=AluSc5
ADediting_1183107	chr5_157134343_-	SINE	Alu	Name=AluSc5
ADediting_1183108	chr5_157134358_-	SINE	Alu	Name=AluSc5
ADediting_1183109	chr5_157134362_-	SINE	Alu	Name=AluSc5
ADediting_1183110	chr5_157134374_-	SINE	Alu	Name=AluSc5
ADediting_1183111	chr5_157134384_-	SINE	Alu	Name=AluSc5
ADediting_1183112	chr5_157134394_-	SINE	Alu	Name=AluSc5
ADediting_1183113	chr5_157134406_-	SINE	Alu	Name=AluSc5
ADediting_1183114	chr5_157134419_-	SINE	Alu	Name=AluSc5
ADediting_1183115	chr5_157134423_-	SINE	Alu	Name=AluSc5
ADediting_1183116	chr5_157134424_-	SINE	Alu	Name=AluSc5
ADediting_1183117	chr5_157134443_-	SINE	Alu	Name=AluSc5
ADediting_1183118	chr5_157134459_-	SINE	Alu	Name=AluSc5
ADediting_1183119	chr5_157134468_-	SINE	Alu	Name=AluSc5
ADediting_1183120	chr5_157134473_-	SINE	Alu	Name=AluSc5
ADediting_1183121	chr5_157134491_-	SINE	Alu	Name=AluSc5
ADediting_1183122	chr5_157134497_-	SINE	Alu	Name=AluSc5
ADediting_1183123	chr5_157135378_-	SINE	Alu	Name=AluJo
ADediting_1183124	chr5_157135416_-	SINE	Alu	Name=AluJo
ADediting_1183125	chr5_157135451_-	SINE	Alu	Name=AluJo
ADediting_1183126	chr5_157135452_-	SINE	Alu	Name=AluJo
ADediting_1183127	chr5_157135454_-	SINE	Alu	Name=AluJo
ADediting_1183128	chr5_157135458_-	SINE	Alu	Name=AluJo
ADediting_1183129	chr5_157135973_-	SINE	Alu	Name=AluJr4
ADediting_1183130	chr5_157135982_-	SINE	Alu	Name=AluJr4
ADediting_1183131	chr5_157136020_-	SINE	Alu	Name=AluJr4
ADediting_1183132	chr5_157136046_-	SINE	Alu	Name=AluJr4
ADediting_1183133	chr5_157136069_-	SINE	Alu	Name=AluJr4
ADediting_1183134	chr5_157136651_-	SINE	Alu	Name=AluSz6
ADediting_1183135	chr5_157136688_-	SINE	Alu	Name=AluSz6
ADediting_1183136	chr5_157136697_-	SINE	Alu	Name=AluSz6
ADediting_1183137	chr5_157136698_-	SINE	Alu	Name=AluSz6
ADediting_1183138	chr5_157136708_-	SINE	Alu	Name=AluSz6
ADediting_1183139	chr5_157136714_-	SINE	Alu	Name=AluSz6
ADediting_1183140	chr5_157136724_-	SINE	Alu	Name=AluSz6
ADediting_1183141	chr5_157136733_-	SINE	Alu	Name=AluSz6
ADediting_1183142	chr5_157136736_-	SINE	Alu	Name=AluSz6
ADediting_1183143	chr5_157136737_-	SINE	Alu	Name=AluSz6
ADediting_1183144	chr5_157136739_-	SINE	Alu	Name=AluSz6
ADediting_1183145	chr5_157136742_-	SINE	Alu	Name=AluSz6
ADediting_1183146	chr5_157136753_-	SINE	Alu	Name=AluSz6
ADediting_1183147	chr5_157136755_-	SINE	Alu	Name=AluSz6
ADediting_1183148	chr5_157136756_-	SINE	Alu	Name=AluSz6
ADediting_1183149	chr5_157136787_-	SINE	Alu	Name=AluSz6
ADediting_1183150	chr5_157136832_-	SINE	Alu	Name=AluSz6
ADediting_1183151	chr5_157136833_-	SINE	Alu	Name=AluSz6
ADediting_1183152	chr5_157136841_-	SINE	Alu	Name=AluSz6
ADediting_1183153	chr5_157137036_-	SINE	Alu	Name=AluSp
ADediting_1183154	chr5_157137040_-	SINE	Alu	Name=AluSp
ADediting_1183155	chr5_157137058_-	SINE	Alu	Name=AluSp
ADediting_1183156	chr5_157137070_-	SINE	Alu	Name=AluSp
ADediting_1183157	chr5_157137127_-	SINE	Alu	Name=AluSp
ADediting_1183158	chr5_157137131_-	SINE	Alu	Name=AluSp
ADediting_1183159	chr5_157137136_-	SINE	Alu	Name=AluSp
ADediting_1183160	chr5_157137137_-	SINE	Alu	Name=AluSp
ADediting_1183161	chr5_157137163_-	SINE	Alu	Name=AluSp
ADediting_1183162	chr5_157137168_-	SINE	Alu	Name=AluSp
ADediting_1183163	chr5_157137171_-	SINE	Alu	Name=AluSp
ADediting_1183164	chr5_157137175_-	SINE	Alu	Name=AluSp
ADediting_1183165	chr5_157137198_-	SINE	Alu	Name=AluSp
ADediting_1183166	chr5_157137224_-	SINE	Alu	Name=AluSp
ADediting_1183167	chr5_157137228_-	SINE	Alu	Name=AluSp
ADediting_1183168	chr5_157137269_-	SINE	Alu	Name=AluSp
ADediting_1183169	chr5_157137270_-	SINE	Alu	Name=AluSp
ADediting_1183170	chr5_157137278_-	SINE	Alu	Name=AluSp
ADediting_1580050	chr5_157086475_-	SINE	Alu	Name=AluSg
ADediting_1580051	chr5_157088129_-	SINE	Alu	Name=AluJb
ADediting_1580055	chr5_157117046_-	LINE	L1	Name=L1ME3B
ADediting_1580056	chr5_157117064_-	LINE	L1	Name=L1ME3B
ADediting_1580057	chr5_157117069_-	LINE	L1	Name=L1ME3B
ADediting_1580058	chr5_157117070_-	LINE	L1	Name=L1ME3B
ADediting_1580059	chr5_157117072_-	LINE	L1	Name=L1ME3B
ADediting_1580060	chr5_157117075_-	LINE	L1	Name=L1ME3B
ADediting_1580061	chr5_157117867_-	SINE	Alu	Name=AluSx
ADediting_1580062	chr5_157117888_-	SINE	Alu	Name=AluSx
ADediting_1580063	chr5_157123536_-	SINE	Alu	Name=AluSq2
ADediting_1580064	chr5_157124110_-	SINE	Alu	Name=AluJo
ADediting_1580065	chr5_157124137_-	SINE	Alu	Name=AluJo
ADediting_1580066	chr5_157124138_-	SINE	Alu	Name=AluJo
ADediting_1580067	chr5_157124141_-	SINE	Alu	Name=AluJo
ADediting_1580068	chr5_157124150_-	SINE	Alu	Name=AluJo
ADediting_1580069	chr5_157124151_-	SINE	Alu	Name=AluJo
ADediting_1580070	chr5_157124155_-	SINE	Alu	Name=AluJo
ADediting_1580071	chr5_157124169_-	SINE	Alu	Name=AluJo
ADediting_1580072	chr5_157124185_-	SINE	Alu	Name=AluJo
ADediting_1580073	chr5_157124186_-	SINE	Alu	Name=AluJo
ADediting_1580074	chr5_157124825_-	SINE	Alu	Name=AluSz6
ADediting_1580075	chr5_157125093_-	SINE	Alu	Name=AluJr
ADediting_1580076	chr5_157125105_-	SINE	Alu	Name=AluJr
ADediting_1580077	chr5_157125106_-	SINE	Alu	Name=AluJr
ADediting_1580078	chr5_157125125_-	SINE	Alu	Name=AluJr
ADediting_1580079	chr5_157125595_-	SINE	Alu	Name=AluJr
ADediting_1580080	chr5_157125598_-	SINE	Alu	Name=AluJr
ADediting_1580081	chr5_157125620_-	SINE	Alu	Name=AluJr
ADediting_1580082	chr5_157125625_-	SINE	Alu	Name=AluJr
ADediting_1580083	chr5_157129557_-	SINE	Alu	Name=AluSp
ADediting_1580084	chr5_157129562_-	SINE	Alu	Name=AluSp
ADediting_1580085	chr5_157129575_-	SINE	Alu	Name=AluSp
ADediting_1580086	chr5_157129577_-	SINE	Alu	Name=AluSp
ADediting_1580087	chr5_157129582_-	SINE	Alu	Name=AluSp
ADediting_1580088	chr5_157129587_-	SINE	Alu	Name=AluSp
ADediting_1580089	chr5_157129621_-	SINE	Alu	Name=AluSp
ADediting_1580090	chr5_157133889_-	SINE	Alu	Name=AluJo
ADediting_1580091	chr5_157134039_-	SINE	Alu	Name=AluJo
ADediting_1580092	chr5_157134368_-	SINE	Alu	Name=AluSc5
ADediting_1580093	chr5_157136617_-	SINE	Alu	Name=AluSz6
ADediting_1580094	chr5_157136754_-	SINE	Alu	Name=AluSz6
ADediting_1580095	chr5_157136761_-	SINE	Alu	Name=AluSz6
ADediting_1580096	chr5_157137120_-	SINE	Alu	Name=AluSp
ADediting_1655621	chr5_157129542_-	SINE	Alu	Name=AluSp
ADediting_1655622	chr5_157129544_-	SINE	Alu	Name=AluSp

Top

RNA A-to-I editing events in the alternative splicing sites for HAVCR2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for HAVCR2

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

Top

Protein coding region RNA A-to-I editings for HAVCR2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for HAVCR2

RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1182876

chr5_157086404_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-3189-3p

chr5

157086403

157086409

7mer-m8

157086402

157086421

145

-25.87

ADediting_1182876

chr5_157086404_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-33b-3p

chr5

157086399

157086405

7mer-m8

157086398

157086418

157

-22.77

ADediting_1182876

chr5_157086404_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-515-3p

chr5

157086399

157086405

7mer-m8

157086398

157086419

145

-17.44

ADediting_1182876

chr5_157086404_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-519e-3p

chr5

157086399

157086405

7mer-m8

157086398

157086419

140

-13.51

ADediting_1182877

chr5_157086405_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-326

chr5

157086403

157086409

7mer-m8

157086402

157086421

140

-14.65

ADediting_1182877

chr5_157086405_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-330-5p

chr5

157086403

157086409

7mer-m8

157086402

157086423

140

-21.77

ADediting_1182877

chr5_157086405_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-4314

chr5

157086404

157086410

7mer-m8

157086403

157086420

140

-21.61

ADediting_1182877

chr5_157086405_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-5691

chr5

157086401

157086407

7mer-m8

157086400

157086422

152

-21.98

ADediting_1182877

chr5_157086405_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-6805-3p

chr5

157086401

157086407

7mer-m8

157086400

157086422

140

-17.22

ADediting_1182879

chr5_157086548_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-6089

chr5

157086543

157086549

7mer-m8

157086542

157086565

164

-39.99

ADediting_1580050

chr5_157086475_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-340-3p

chr5

157086474

157086480

7mer-m8

157086473

157086494

149

-17.74

ADediting_1580050

chr5_157086475_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-6827-3p

chr5

157086474

157086480

7mer-m8

157086473

157086493

153

-17.53

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1182876

chr5_157086404_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-520f-3p

chr5

157086399

157086405

7mer-m8

157086398

157086419

140

-14.83

ADediting_1182877

chr5_157086405_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-887-5p

chr5

157086404

157086411

8mer-1a

157086404

157086425

150

-16.01

ADediting_1182879

chr5_157086548_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-4478

chr5

157086544

157086550

7mer-m8

157086543

157086558

149

-25.05

ADediting_1182879

chr5_157086548_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-4649-3p

chr5

157086547

157086553

7mer-m8

157086546

157086566

140

-14.11

ADediting_1182879

chr5_157086548_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-7160-5p

chr5

157086546

157086552

7mer-m8

157086545

157086565

146

-20.4

ADediting_1580050

chr5_157086475_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-10a-5p

chr5

157086471

157086477

7mer-m8

157086470

157086492

145

-13.67

ADediting_1580050

chr5_157086475_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-10b-5p

chr5

157086471

157086477

7mer-m8

157086470

157086492

140

-13.05

ADediting_1580050

chr5_157086475_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-339-5p

chr5

157086472

157086478

7mer-m8

157086471

157086495

151

-18.58

ADediting_1580050

chr5_157086475_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-4421

chr5

157086473

157086479

7mer-m8

157086472

157086493

154

-16.19

ADediting_1580050

chr5_157086475_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-5699-3p

chr5

157086473

157086479

7mer-m8

157086472

157086493

153

-17.34

ADediting_1580050

chr5_157086475_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-6818-3p

chr5

157086475

157086481

7mer-m8

157086474

157086495

140

-13.2

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1337757

chr7_5495852_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-589-3p

chr5

157086629

157086635

7mer-m8

157086628

157086652

158

-19.59

ADediting_1471004

chr9_63819627_+

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-4477b

chr5

157085943

157085950

8mer-1a

157085943

157085966

150

-17.13

ADediting_286380

chr11_79422188_-

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-5579-3p

chr5

157086900

157086907

8mer-1a

157086900

157086917

150

-15.78

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1471003

chr9_63819626_+

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-4477b

chr5

157086354

157086361

8mer-1a

157086354

157086377

154

-13.2

ADediting_1471004

chr9_63819627_+

ENSG00000135077.9

ENST00000307851.9

HAVCR2-201

hsa-miR-4477b

chr5

157086354

157086361

8mer-1a

157086354

157086377

154

-13.2

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for HAVCR2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000307851.9	protein_coding

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_1182876	ENST00000307851.9	chr5_157086404_-	1665	-721.50	-718.40	-726.20
ADediting_1182877	ENST00000307851.9	chr5_157086405_-	1664	-720.90	-718.40	-726.20
ADediting_1580050	ENST00000307851.9	chr5_157086475_-	1594	-717.70	-718.40	-726.20
ADediting_1182878	ENST00000307851.9	chr5_157086484_-	1585	-720.40	-718.40	-726.20
ADediting_1182879	ENST00000307851.9	chr5_157086548_-	1521	-717.60	-718.40	-726.20

RNA A-to-I editing in lncRNA.

ADeditom_ID

ENST

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for HAVCR2

Correlation between ADAR gene expression and RNA editing frequency

Tissue	ADeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
CER	ADediting_1182979	chr5_157117347_-	0.0105166401075187	0.208334943222634	6.50351642819555e-05	0.320142232476888	0.0061241093682146	0.22284935068413
CER	ADediting_1182980	chr5_157117359_-	0.0129879229497799	0.202415128680725	5.5917165678072e-05	0.322846540056293	0.33904400661824	0.0785983028895611
CER	ADediting_1182981	chr5_157117360_-	0.0183273225625224	0.192412742227386	0.000170902675889897	0.302205024202789	0.233146390904858	0.0979353729622628
DLPFC	ADediting_1182998	chr5_157118976_-	0.562170770420765	-0.0330447156438825	0.0106047863797121	-0.144958522768485	2.12260547061957e-15	0.4302442356129
DLPFC	ADediting_1183004	chr5_157127871_-	0.662106493211208	0.0249171173515592	0.121661412828051	-0.0880961506651947	2.39580603247182e-15	0.429508955334768
CER	ADediting_1183046	chr5_157133399_-	3.85480835355342e-07	0.4003354120013	4.95249197741113e-09	0.454946447943542	0.00313558918343008	0.239682182771512
CER	ADediting_1183055	chr5_157133853_-	7.93549376503628e-07	0.390263466987186	1.59619165677747e-12	0.53584105051965	0.0256406973754731	0.182206426826305
TCX	ADediting_1183055	chr5_157133853_-	0.00304707484555388	0.240377158495094	4.15313365745825e-16	0.601176477425615	0.0194744576898142	-0.190602137850696
CER	ADediting_1183062	chr5_157133907_-	0.000613237685789754	0.276544641405831	3.34085927462798e-09	0.459439849190863	6.75961819625239e-05	0.319446630707159
CER	ADediting_1183071	chr5_157133973_-	0.0548805271441617	0.157092185650933	0.000308927675577413	0.290614619422867	0.000131376327656908	0.307202880501972
CER	ADediting_1183074	chr5_157133997_-	7.64048517894152e-05	0.317229183582116	9.87288611509599e-08	0.418478335668917	0.000271214726116994	0.293205840863056
DLPFC	ADediting_1183081	chr5_157134053_-	4.13399921505944e-08	0.305293290371699	4.02888082671568e-11	0.363582351358293	0.0119593195438557	0.142594126381999
CER	ADediting_1183084	chr5_157134115_-	9.87894733663038e-05	0.312520674521268	1.32517615188998e-07	0.414647588275179	0.156643532846917	0.116232685355507
CER	ADediting_1183085	chr5_157134145_-	0.0377531095774131	0.169815758054439	0.000130063254208685	0.307391985164668	0.0396888198112315	0.168159946625877
TCX	ADediting_1183086	chr5_157134148_-	0.111057111783972	0.130640079994154	2.48444939687446e-05	0.336949007953137	0.338610847599622	-0.0786686017512326
DLPFC	ADediting_1183088	chr5_157134161_-	7.82487383610355e-08	0.299249176145822	1.56918267081687e-12	0.387241907599706	0.0998129479553727	0.0936457468754024
CER	ADediting_1183088	chr5_157134161_-	0.000264763248376156	0.293682312649678	2.80635521094487e-05	0.334874525689648	0.240802980969017	0.0963566235512631
DLPFC	ADediting_1183089	chr5_157134162_-	2.29650170421107e-06	0.264653842486192	4.22127778673102e-12	0.380228727512696	0.299114152045599	0.0591607881242508
TCX	ADediting_1183089	chr5_157134162_-	0.00410142541911235	0.233068601100185	3.74972784620721e-05	0.329879560992448	0.1105181402273	-0.13083587534782
DLPFC	ADediting_1183090	chr5_157134163_-	0.00142542342554938	0.180389188946093	5.388505946229e-08	0.302799529736691	0.0384303737730717	0.117648069875124
CER	ADediting_1183096	chr5_157134251_-	0.000289704082773373	0.291896361994281	5.46046723466091e-07	0.395519522212911	0.256727751083575	0.0931815856871568
CER	ADediting_1183097	chr5_157134263_-	0.000205637974205063	0.29863472505444	9.51930061545073e-05	0.313205115730369	0.0626903526699124	0.152367133650946
DLPFC	ADediting_1183105	chr5_157134335_-	7.99656983772554e-08	0.299041125760228	3.45529694110757e-13	0.397653922761496	0.00121755280012052	0.182907272082885
DLPFC	ADediting_1183106	chr5_157134340_-	2.04678246639661e-07	0.289870416346141	6.06425135782837e-12	0.377618805665266	0.0020928658723018	0.17411310909703
CER	ADediting_1183107	chr5_157134343_-	0.00127340866426205	0.26068447661357	4.87544611066893e-05	0.325278555652468	0.911034727109126	-0.00919976848807721
DLPFC	ADediting_1183115	chr5_157134423_-	5.46455077260297e-05	0.227078712785647	2.74830545055949e-08	0.309089820660584	0.000113779968748078	0.217435596131509
DLPFC	ADediting_1183121	chr5_157134491_-	2.54402564125518e-06	0.2635281632404	4.51800129422593e-08	0.304460088758691	0.000286233901960101	0.204667049072364
CER	ADediting_1183128	chr5_157135458_-	0.00038520270079658	0.286165878677053	8.79846480723115e-06	0.354050159547101	0.0168625800156446	0.194873191374107
CER	ADediting_1183139	chr5_157136714_-	0.000283495455505559	0.292327209339209	2.81825608698791e-06	0.371732589742858	0.139704029055148	0.121156747542287
CER	ADediting_1183154	chr5_157137040_-	0.0136220902160379	0.201056569379217	9.97133301555964e-05	0.312348616839899	0.0378435327442894	0.169736837100441
CER	ADediting_1183155	chr5_157137058_-	0.000726990553817441	0.272935481457524	4.53482639542476e-10	0.48128433795947	0.00614209854689713	0.22277296717829
CER	ADediting_1183157	chr5_157137127_-	0.00346789182501184	0.237221898650455	1.04704774037439e-06	0.386306077975478	0.62853074401031	0.0398192008571362
CER	ADediting_1183160	chr5_157137137_-	0.0230967097157273	0.185433695648946	0.000121155608630051	0.308723951575993	0.0185824691740813	0.192001710549508
CER	ADediting_1183167	chr5_157137228_-	0.163180761247403	0.114439555852	2.24163138786123e-06	0.37516508025279	0.065422280321727	0.15082818375713
CER	ADediting_1580090	chr5_157133889_-	0.0325520591624964	0.174648787766612	6.30620273242405e-05	0.320695886932793	0.0107115917115013	0.207825765950362

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	1.02813704279852e-10	0.356377815809495	0.0171091830494416	0.135345219342572	1.69633404645055e-31	0.59840100328088
AC	6.91375351738158e-44	0.735880573039236	1.88479872587802e-23	0.575524003394785	1.35122225147355e-10	0.39173444338996
CER	0.000173734277188425	0.301889783620984	0.00949527047580137	0.211146885673553	0.0145951721516393	0.199075806295046
TCX	0.000352139349834409	0.28798395587684	0.134505680819517	-0.122758551101227	5.64904486967621e-05	0.322664735905257
FP	1.16923798417707e-07	0.384458712721099	1.53085265266452e-06	0.351239889815186	0.00401169766572259	0.214651025354941
IFG	0.303340975840439	0.214430039120567	0.594561966398686	0.111838137733466	0.0484937791167839	0.398485731432522
PG	1.32246759663626e-27	0.689782891088085	1.60010335540278e-11	0.468189608730328	0.0764582124474138	0.130225389455445
STG	0.00466887999256514	0.305823024588517	0.604468224019015	0.0573293750697393	0.0193861285208459	0.254693021502065

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Relation with AD stages for HAVCR2

Correlation between AD stages and RNA editing frequency

Tissue	ADeditomID	position	P-val	Coeff.
CER	ADediting_1183046	chr5_157133399_-	0.000119887251780313	0.3617114535292
CER	ADediting_1183055	chr5_157133853_-	0.000452068124709526	0.331772456468038
CER	ADediting_1183062	chr5_157133907_-	7.54293988833603e-05	0.371502093367361
CER	ADediting_1183071	chr5_157133973_-	0.000584242486470382	0.325623854411077
CER	ADediting_1183074	chr5_157133997_-	0.000408810232309872	0.334149202800093
CER	ADediting_1183091	chr5_157134174_-	0.000599320440585761	0.325005959640813
CER	ADediting_1183128	chr5_157135458_-	0.00139513469887679	0.303737604731807
CER	ADediting_1183155	chr5_157137058_-	4.0065198840246e-05	0.38438464487376
CER	ADediting_1183159	chr5_157137136_-	0.000721324810462594	0.320473074366131

Correlation between AD stages and this gene's expression

Tissue	P-val	Coeff.
TCX	2.414794090656e-05	0.397795196914474

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RelatedDrugs for HAVCR2

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for HAVCR2

Diseases associated with this gene.
(DisGeNet 4.0)

Gene

Disease ID

Disease name

# pubmeds

Source

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Gene summary for HAVCR2

RNA A-to-I events for HAVCR2

RNA editing positional annotations for HAVCR2 using Annovar

RNA A-to-I editing events in the alternative splicing sites for HAVCR2

Differntial gene expression between RNA A-to-I edited versus non-edited samples for HAVCR2

Protein coding region RNA A-to-I editings for HAVCR2

The effects of the RNA editing to the miRNA binding sites for HAVCR2

The effects of the RNA editing to the stability of the RNA structures for HAVCR2

Relation with ADAR for HAVCR2

Relation with AD stages for HAVCR2

RelatedDrugs for HAVCR2

RelatedDiseases for HAVCR2

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene