ADeditome: functional annotation of RNA A-to-I editing in AD

Gene summary for TMEM25

Gene summary

Gene information	Gene symbol	TMEM25
	Gene ID	84866
	Gene name	transmembrane protein 25
	Synonyms	-
	Cytomap	11q23.3
	Type of gene	protein-coding
	Description	transmembrane protein 250610039J01Rik
	Modification date	20200327
	UniProtAcc	Q86YD3,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for TMEM25

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_237922(118535909, +), ADediting_237923(118535942, +), ADediting_237924(118535971, +), ADediting_237925(118535995, +), ADediting_237926(118536007, +), ADediting_237927(118536050, +), ADediting_237928(118536052, +), ADediting_237929(118536058, +), ADediting_237930(118536061, +), ADediting_237931(118536112, +), ADediting_237932(118536113, +), ADediting_237933(118536139, +), ADediting_237934(118536140, +), ADediting_237935(118536427, +), ADediting_237936(118536445, +), ADediting_237937(118536911, +), ADediting_237938(118536925, +), ADediting_237939(118536938, +), ADediting_237940(118536939, +), ADediting_237941(118536944, +), ADediting_237942(118536954, +), ADediting_237943(118536975, +), ADediting_237944(118536987, +), ADediting_237945(118536992, +), ADediting_237946(118537063, +), ADediting_237947(118537077, +), ADediting_237948(118537085, +), ADediting_237949(118537086, +), ADediting_237950(118537108, +), ADediting_237951(118537126, +), ADediting_237952(118537131, +), ADediting_237953(118537133, +), ADediting_237954(118537134, +), ADediting_237955(118537142, +), ADediting_237956(118537155, +), ADediting_237957(118537157, +), ADediting_237958(118537164, +), ADediting_237959(118537165, +), ADediting_237960(118537170, +), ADediting_237961(118537176, +), ADediting_237962(118537180, +), ADediting_237963(118537187, +), ADediting_237964(118537190, +), ADediting_237965(118537194, +), ADediting_237966(118537202, +), ADediting_237967(118537207, +), ADediting_237968(118537226, +), ADediting_237969(118537230, +), ADediting_237970(118537243, +), ADediting_237971(118537247, +), ADediting_237972(118537253, +), ADediting_237973(118537254, +), ADediting_237974(118537262, +), ADediting_237975(118537266, +), ADediting_237976(118537269, +), ADediting_237977(118537273, +), ADediting_237978(118537282, +), ADediting_237979(118537286, +), ADediting_237980(118537291, +), ADediting_237981(118537293, +), ADediting_237982(118537302, +), ADediting_237983(118537323, +), ADediting_237984(118537328, +), ADediting_237985(118537329, +), ADediting_237986(118537357, +), ADediting_237987(118537359, +), ADediting_237988(118537361, +), ADediting_237989(118537363, +), ADediting_237990(118537371, +), ADediting_237991(118537376, +), ADediting_237992(118537789, +), ADediting_237993(118537795, +), ADediting_237994(118537796, +), ADediting_237995(118537818, +), ADediting_237996(118537841, +), ADediting_237997(118537844, +), ADediting_237998(118537849, +), ADediting_237999(118537850, +), ADediting_238000(118537855, +), ADediting_238001(118537865, +), ADediting_238002(118537867, +), ADediting_238003(118537873, +), ADediting_238004(118537881, +), ADediting_238005(118537887, +), ADediting_238006(118537890, +), ADediting_238007(118537891, +), ADediting_238008(118537892, +), ADediting_238009(118537893, +), ADediting_238010(118537895, +), ADediting_238011(118537897, +), ADediting_238012(118537898, +), ADediting_238013(118537899, +), ADediting_238014(118537900, +), ADediting_238015(118537904, +), ADediting_238016(118537930, +), ADediting_238017(118537936, +), ADediting_238018(118537940, +), ADediting_238019(118537957, +), ADediting_238020(118537958, +), ADediting_238021(118537966, +), ADediting_238022(118537971, +), ADediting_238023(118537976, +), ADediting_238024(118537983, +), ADediting_238025(118538000, +), ADediting_238026(118538002, +), ADediting_238027(118538005, +), ADediting_238028(118538191, +), ADediting_238029(118538195, +), ADediting_238030(118538197, +), ADediting_238031(118538211, +), ADediting_238032(118538236, +), ADediting_238033(118538241, +), ADediting_238034(118538246, +), ADediting_238035(118538258, +), ADediting_238036(118538265, +), ADediting_238037(118538272, +), ADediting_238038(118538275, +), ADediting_238039(118538276, +), ADediting_238040(118538289, +), ADediting_238041(118538311, +), ADediting_238042(118538313, +), ADediting_238043(118538334, +), ADediting_238044(118538335, +), ADediting_238045(118538343, +), ADediting_238046(118538352, +), ADediting_238047(118538359, +), ADediting_238048(118538366, +), ADediting_238049(118538369, +), ADediting_238050(118538371, +), ADediting_238051(118538378, +), ADediting_238052(118538406, +), ADediting_238053(118538414, +), ADediting_238054(118538427, +), ADediting_238055(118538428, +), ADediting_238056(118538429, +), ADediting_238057(118538441, +), ADediting_238058(118538615, +), ADediting_238059(118538619, +), ADediting_238060(118538631, +), ADediting_238061(118538637, +), ADediting_238062(118538638, +), ADediting_238063(118538664, +), ADediting_238064(118538694, +), ADediting_238065(118538707, +), ADediting_238066(118538709, +), ADediting_238067(118538714, +), ADediting_238068(118538715, +), ADediting_238069(118538717, +), ADediting_238070(118538722, +), ADediting_238071(118538731, +), ADediting_238072(118538732, +), ADediting_238073(118538733, +), ADediting_238074(118538734, +), ADediting_238075(118538735, +), ADediting_238076(118538737, +), ADediting_238077(118538739, +), ADediting_238078(118538740, +), ADediting_238079(118538741, +), ADediting_238080(118538742, +), ADediting_238081(118538743, +), ADediting_238082(118538744, +), ADediting_238083(118538746, +), ADediting_238084(118538754, +), ADediting_238085(118538772, +), ADediting_238086(118538773, +), ADediting_238087(118538778, +), ADediting_238088(118538782, +), ADediting_238089(118538795, +), ADediting_238090(118538799, +), ADediting_238091(118538814, +), ADediting_238092(118538817, +), ADediting_238093(118538820, +), ADediting_238094(118538824, +), ADediting_238095(118538842, +), ADediting_238096(118538844, +), ADediting_238097(118538847, +), ADediting_238098(118538852, +), ADediting_238099(118538871, +), ADediting_238100(118538880, +), ADediting_238101(118539219, +), ADediting_238102(118539232, +), ADediting_238103(118539242, +), ADediting_238104(118539254, +), ADediting_238105(118539268, +), ADediting_238106(118539285, +), ADediting_238107(118539293, +), ADediting_238108(118539294, +), ADediting_238109(118539297, +), ADediting_238110(118539307, +), ADediting_238111(118539357, +), ADediting_238112(118539365, +), ADediting_238113(118539377, +), ADediting_238114(118539409, +), ADediting_238115(118539426, +), ADediting_238116(118539427, +), ADediting_238117(118539440, +), ADediting_238118(118539446, +), ADediting_238119(118539747, +), ADediting_238120(118539749, +), ADediting_238121(118539759, +), ADediting_238122(118539765, +), ADediting_238123(118539766, +), ADediting_238124(118539768, +), ADediting_238125(118539786, +), ADediting_238126(118539796, +), ADediting_238127(118539811, +), ADediting_238128(118539825, +), ADediting_238129(118539830, +), ADediting_238130(118539835, +), ADediting_238131(118539837, +), ADediting_238132(118539845, +), ADediting_238133(118539850, +), ADediting_238134(118539856, +), ADediting_238135(118539860, +), ADediting_238136(118539868, +), ADediting_238137(118539871, +), ADediting_238138(118539874, +), ADediting_238139(118539878, +), ADediting_238140(118539882, +), ADediting_238141(118539900, +), ADediting_238142(118539914, +), ADediting_238143(118539941, +), ADediting_238144(118539942, +), ADediting_238145(118539976, +), ADediting_238146(118540005, +), ADediting_238147(118540133, +), ADediting_238148(118540153, +), ADediting_238149(118540173, +), ADediting_238150(118540174, +), ADediting_238151(118540190, +), ADediting_238152(118540227, +), ADediting_238153(118540239, +), ADediting_238154(118541279, +), ADediting_238155(118541315, +), ADediting_238156(118541341, +), ADediting_238157(118541870, +), ADediting_238158(118541907, +), ADediting_238159(118542030, +), ADediting_238160(118542655, +), ADediting_238161(118543588, +), ADediting_238162(118543620, +), ADediting_238163(118543876, +), ADediting_1525736(118536268, +), ADediting_1525737(118537145, +), ADediting_1525738(118537191, +), ADediting_1525739(118537301, +), ADediting_1525740(118537306, +), ADediting_1525741(118537901, +), ADediting_1525742(118537947, +), ADediting_1525743(118537953, +), ADediting_1525744(118538356, +), ADediting_1525745(118538450, +), ADediting_1525746(118539757, +), ADediting_1525747(118539801, +), ADediting_1525748(118539806, +), ADediting_1525749(118539843, +), ADediting_1525750(118542541, +), ADediting_1525751(118542770, +), ADediting_1525752(118542986, +),

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RNA editing positional annotations for TMEM25 using Annovar

Protein coding RNA editing(s).

ADeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_237922	chr11_118535909_+	intronic
ADediting_237923	chr11_118535942_+	intronic
ADediting_237924	chr11_118535971_+	intronic
ADediting_237925	chr11_118535995_+	intronic
ADediting_237926	chr11_118536007_+	intronic
ADediting_237927	chr11_118536050_+	intronic
ADediting_237928	chr11_118536052_+	intronic
ADediting_237929	chr11_118536058_+	intronic
ADediting_237930	chr11_118536061_+	intronic
ADediting_237931	chr11_118536112_+	intronic
ADediting_237932	chr11_118536113_+	intronic
ADediting_237933	chr11_118536139_+	intronic
ADediting_237934	chr11_118536140_+	intronic
ADediting_237935	chr11_118536427_+	intronic
ADediting_237936	chr11_118536445_+	intronic
ADediting_237937	chr11_118536911_+	intronic
ADediting_237938	chr11_118536925_+	intronic
ADediting_237939	chr11_118536938_+	intronic
ADediting_237940	chr11_118536939_+	intronic
ADediting_237941	chr11_118536944_+	intronic
ADediting_237942	chr11_118536954_+	intronic
ADediting_237943	chr11_118536975_+	intronic
ADediting_237944	chr11_118536987_+	intronic
ADediting_237945	chr11_118536992_+	intronic
ADediting_237946	chr11_118537063_+	intronic
ADediting_237947	chr11_118537077_+	intronic
ADediting_237948	chr11_118537085_+	intronic
ADediting_237949	chr11_118537086_+	intronic
ADediting_237950	chr11_118537108_+	intronic
ADediting_237951	chr11_118537126_+	intronic
ADediting_237952	chr11_118537131_+	intronic
ADediting_237953	chr11_118537133_+	intronic
ADediting_237954	chr11_118537134_+	intronic
ADediting_237955	chr11_118537142_+	intronic
ADediting_237956	chr11_118537155_+	intronic
ADediting_237957	chr11_118537157_+	intronic
ADediting_237958	chr11_118537164_+	intronic
ADediting_237959	chr11_118537165_+	intronic
ADediting_237960	chr11_118537170_+	intronic
ADediting_237961	chr11_118537176_+	intronic
ADediting_237962	chr11_118537180_+	intronic
ADediting_237963	chr11_118537187_+	intronic
ADediting_237964	chr11_118537190_+	intronic
ADediting_237965	chr11_118537194_+	intronic
ADediting_237966	chr11_118537202_+	intronic
ADediting_237967	chr11_118537207_+	intronic
ADediting_237968	chr11_118537226_+	intronic
ADediting_237969	chr11_118537230_+	intronic
ADediting_237970	chr11_118537243_+	intronic
ADediting_237971	chr11_118537247_+	intronic
ADediting_237972	chr11_118537253_+	intronic
ADediting_237973	chr11_118537254_+	intronic
ADediting_237974	chr11_118537262_+	intronic
ADediting_237975	chr11_118537266_+	intronic
ADediting_237976	chr11_118537269_+	intronic
ADediting_237977	chr11_118537273_+	intronic
ADediting_237978	chr11_118537282_+	intronic
ADediting_237979	chr11_118537286_+	intronic
ADediting_237980	chr11_118537291_+	intronic
ADediting_237981	chr11_118537293_+	intronic
ADediting_237982	chr11_118537302_+	intronic
ADediting_237983	chr11_118537323_+	intronic
ADediting_237984	chr11_118537328_+	intronic
ADediting_237985	chr11_118537329_+	intronic
ADediting_237986	chr11_118537357_+	intronic
ADediting_237987	chr11_118537359_+	intronic
ADediting_237988	chr11_118537361_+	intronic
ADediting_237989	chr11_118537363_+	intronic
ADediting_237990	chr11_118537371_+	intronic
ADediting_237991	chr11_118537376_+	intronic
ADediting_237992	chr11_118537789_+	intronic
ADediting_237993	chr11_118537795_+	intronic
ADediting_237994	chr11_118537796_+	intronic
ADediting_237995	chr11_118537818_+	intronic
ADediting_237996	chr11_118537841_+	intronic
ADediting_237997	chr11_118537844_+	intronic
ADediting_237998	chr11_118537849_+	intronic
ADediting_237999	chr11_118537850_+	intronic
ADediting_238000	chr11_118537855_+	intronic
ADediting_238001	chr11_118537865_+	intronic
ADediting_238002	chr11_118537867_+	intronic
ADediting_238003	chr11_118537873_+	intronic
ADediting_238004	chr11_118537881_+	intronic
ADediting_238005	chr11_118537887_+	intronic
ADediting_238006	chr11_118537890_+	intronic
ADediting_238007	chr11_118537891_+	intronic
ADediting_238008	chr11_118537892_+	intronic
ADediting_238009	chr11_118537893_+	intronic
ADediting_238010	chr11_118537895_+	intronic
ADediting_238011	chr11_118537897_+	intronic
ADediting_238012	chr11_118537898_+	intronic
ADediting_238013	chr11_118537899_+	intronic
ADediting_238014	chr11_118537900_+	intronic
ADediting_238015	chr11_118537904_+	intronic
ADediting_238016	chr11_118537930_+	intronic
ADediting_238017	chr11_118537936_+	intronic
ADediting_238018	chr11_118537940_+	intronic
ADediting_238019	chr11_118537957_+	intronic
ADediting_238020	chr11_118537958_+	intronic
ADediting_238021	chr11_118537966_+	intronic
ADediting_238022	chr11_118537971_+	intronic
ADediting_238023	chr11_118537976_+	intronic
ADediting_238024	chr11_118537983_+	intronic
ADediting_238025	chr11_118538000_+	intronic
ADediting_238026	chr11_118538002_+	intronic
ADediting_238027	chr11_118538005_+	intronic
ADediting_238028	chr11_118538191_+	intronic
ADediting_238029	chr11_118538195_+	intronic
ADediting_238030	chr11_118538197_+	intronic
ADediting_238031	chr11_118538211_+	intronic
ADediting_238032	chr11_118538236_+	intronic
ADediting_238033	chr11_118538241_+	intronic
ADediting_238034	chr11_118538246_+	intronic
ADediting_238035	chr11_118538258_+	intronic
ADediting_238036	chr11_118538265_+	intronic
ADediting_238037	chr11_118538272_+	intronic
ADediting_238038	chr11_118538275_+	intronic
ADediting_238039	chr11_118538276_+	intronic
ADediting_238040	chr11_118538289_+	intronic
ADediting_238041	chr11_118538311_+	intronic
ADediting_238042	chr11_118538313_+	intronic
ADediting_238043	chr11_118538334_+	intronic
ADediting_238044	chr11_118538335_+	intronic
ADediting_238045	chr11_118538343_+	intronic
ADediting_238046	chr11_118538352_+	intronic
ADediting_238047	chr11_118538359_+	intronic
ADediting_238048	chr11_118538366_+	intronic
ADediting_238049	chr11_118538369_+	intronic
ADediting_238050	chr11_118538371_+	intronic
ADediting_238051	chr11_118538378_+	intronic
ADediting_238052	chr11_118538406_+	intronic
ADediting_238053	chr11_118538414_+	intronic
ADediting_238054	chr11_118538427_+	intronic
ADediting_238055	chr11_118538428_+	intronic
ADediting_238056	chr11_118538429_+	intronic
ADediting_238057	chr11_118538441_+	intronic
ADediting_238058	chr11_118538615_+	intronic
ADediting_238059	chr11_118538619_+	intronic
ADediting_238060	chr11_118538631_+	intronic
ADediting_238061	chr11_118538637_+	intronic
ADediting_238062	chr11_118538638_+	intronic
ADediting_238063	chr11_118538664_+	intronic
ADediting_238064	chr11_118538694_+	intronic
ADediting_238065	chr11_118538707_+	intronic
ADediting_238066	chr11_118538709_+	intronic
ADediting_238067	chr11_118538714_+	intronic
ADediting_238068	chr11_118538715_+	intronic
ADediting_238069	chr11_118538717_+	intronic
ADediting_238070	chr11_118538722_+	intronic
ADediting_238071	chr11_118538731_+	intronic
ADediting_238072	chr11_118538732_+	intronic
ADediting_238073	chr11_118538733_+	intronic
ADediting_238074	chr11_118538734_+	intronic
ADediting_238075	chr11_118538735_+	intronic
ADediting_238076	chr11_118538737_+	intronic
ADediting_238077	chr11_118538739_+	intronic
ADediting_238078	chr11_118538740_+	intronic
ADediting_238079	chr11_118538741_+	intronic
ADediting_238080	chr11_118538742_+	intronic
ADediting_238081	chr11_118538743_+	intronic
ADediting_238082	chr11_118538744_+	intronic
ADediting_238083	chr11_118538746_+	intronic
ADediting_238084	chr11_118538754_+	intronic
ADediting_238085	chr11_118538772_+	intronic
ADediting_238086	chr11_118538773_+	intronic
ADediting_238087	chr11_118538778_+	intronic
ADediting_238088	chr11_118538782_+	intronic
ADediting_238089	chr11_118538795_+	intronic
ADediting_238090	chr11_118538799_+	intronic
ADediting_238091	chr11_118538814_+	intronic
ADediting_238092	chr11_118538817_+	intronic
ADediting_238093	chr11_118538820_+	intronic
ADediting_238094	chr11_118538824_+	intronic
ADediting_238095	chr11_118538842_+	intronic
ADediting_238096	chr11_118538844_+	intronic
ADediting_238097	chr11_118538847_+	intronic
ADediting_238098	chr11_118538852_+	intronic
ADediting_238099	chr11_118538871_+	intronic
ADediting_238100	chr11_118538880_+	intronic
ADediting_238101	chr11_118539219_+	intronic
ADediting_238102	chr11_118539232_+	intronic
ADediting_238103	chr11_118539242_+	intronic
ADediting_238104	chr11_118539254_+	intronic
ADediting_238105	chr11_118539268_+	intronic
ADediting_238106	chr11_118539285_+	intronic
ADediting_238107	chr11_118539293_+	intronic
ADediting_238108	chr11_118539294_+	intronic
ADediting_238109	chr11_118539297_+	intronic
ADediting_238110	chr11_118539307_+	intronic
ADediting_238111	chr11_118539357_+	intronic
ADediting_238112	chr11_118539365_+	intronic
ADediting_238113	chr11_118539377_+	intronic
ADediting_238114	chr11_118539409_+	intronic
ADediting_238115	chr11_118539426_+	intronic
ADediting_238116	chr11_118539427_+	intronic
ADediting_238117	chr11_118539440_+	intronic
ADediting_238118	chr11_118539446_+	intronic
ADediting_238119	chr11_118539747_+	intronic
ADediting_238120	chr11_118539749_+	intronic
ADediting_238121	chr11_118539759_+	intronic
ADediting_238122	chr11_118539765_+	intronic
ADediting_238123	chr11_118539766_+	intronic
ADediting_238124	chr11_118539768_+	intronic
ADediting_238125	chr11_118539786_+	intronic
ADediting_238126	chr11_118539796_+	intronic
ADediting_238127	chr11_118539811_+	intronic
ADediting_238128	chr11_118539825_+	intronic
ADediting_238129	chr11_118539830_+	intronic
ADediting_238130	chr11_118539835_+	intronic
ADediting_238131	chr11_118539837_+	intronic
ADediting_238132	chr11_118539845_+	intronic
ADediting_238133	chr11_118539850_+	intronic
ADediting_238134	chr11_118539856_+	intronic
ADediting_238135	chr11_118539860_+	intronic
ADediting_238136	chr11_118539868_+	intronic
ADediting_238137	chr11_118539871_+	intronic
ADediting_238138	chr11_118539874_+	intronic
ADediting_238139	chr11_118539878_+	intronic
ADediting_238140	chr11_118539882_+	intronic
ADediting_238141	chr11_118539900_+	intronic
ADediting_238142	chr11_118539914_+	intronic
ADediting_238143	chr11_118539941_+	intronic
ADediting_238144	chr11_118539942_+	intronic
ADediting_238145	chr11_118539976_+	intronic
ADediting_238146	chr11_118540005_+	intronic
ADediting_238147	chr11_118540133_+	intronic
ADediting_238148	chr11_118540153_+	intronic
ADediting_238149	chr11_118540173_+	intronic
ADediting_238150	chr11_118540174_+	intronic
ADediting_238151	chr11_118540190_+	intronic
ADediting_238152	chr11_118540227_+	intronic
ADediting_238153	chr11_118540239_+	intronic
ADediting_238154	chr11_118541279_+	intronic
ADediting_238155	chr11_118541315_+	intronic
ADediting_238156	chr11_118541341_+	intronic
ADediting_238157	chr11_118541870_+	intronic
ADediting_238158	chr11_118541907_+	intronic
ADediting_238159	chr11_118542030_+	intronic
ADediting_238160	chr11_118542655_+	intronic
ADediting_238161	chr11_118543588_+	intronic
ADediting_238162	chr11_118543620_+	intronic
ADediting_238163	chr11_118543876_+	intronic
ADediting_1525736	chr11_118536268_+	intronic
ADediting_1525737	chr11_118537145_+	intronic
ADediting_1525738	chr11_118537191_+	intronic
ADediting_1525739	chr11_118537301_+	intronic
ADediting_1525740	chr11_118537306_+	intronic
ADediting_1525741	chr11_118537901_+	intronic
ADediting_1525742	chr11_118537947_+	intronic
ADediting_1525743	chr11_118537953_+	intronic
ADediting_1525744	chr11_118538356_+	intronic
ADediting_1525745	chr11_118538450_+	intronic
ADediting_1525746	chr11_118539757_+	intronic
ADediting_1525747	chr11_118539801_+	intronic
ADediting_1525748	chr11_118539806_+	intronic
ADediting_1525749	chr11_118539843_+	intronic
ADediting_1525750	chr11_118542541_+	intronic
ADediting_1525751	chr11_118542770_+	intronic
ADediting_1525752	chr11_118542986_+	intronic

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_237922	chr11_118535909_+	SINE	Alu	Name=AluSx1
ADediting_237923	chr11_118535942_+	SINE	Alu	Name=AluSx1
ADediting_237924	chr11_118535971_+	SINE	Alu	Name=AluSx1
ADediting_237925	chr11_118535995_+	SINE	Alu	Name=AluSx1
ADediting_237926	chr11_118536007_+	SINE	Alu	Name=AluSx1
ADediting_237927	chr11_118536050_+	SINE	Alu	Name=AluSx1
ADediting_237928	chr11_118536052_+	SINE	Alu	Name=AluSx1
ADediting_237929	chr11_118536058_+	SINE	Alu	Name=AluSx1
ADediting_237930	chr11_118536061_+	SINE	Alu	Name=AluSx1
ADediting_237931	chr11_118536112_+	SINE	Alu	Name=AluSx1
ADediting_237932	chr11_118536113_+	SINE	Alu	Name=AluSx1
ADediting_237933	chr11_118536139_+	SINE	Alu	Name=AluSx1
ADediting_237934	chr11_118536140_+	SINE	Alu	Name=AluSx1
ADediting_237935	chr11_118536427_+	SINE	Alu	Name=AluSp
ADediting_237936	chr11_118536445_+	SINE	Alu	Name=AluSp
ADediting_237937	chr11_118536911_+	SINE	Alu	Name=AluJo
ADediting_237938	chr11_118536925_+	SINE	Alu	Name=AluJo
ADediting_237939	chr11_118536938_+	SINE	Alu	Name=AluJo
ADediting_237940	chr11_118536939_+	SINE	Alu	Name=AluJo
ADediting_237941	chr11_118536944_+	SINE	Alu	Name=AluJo
ADediting_237942	chr11_118536954_+	SINE	Alu	Name=AluJo
ADediting_237943	chr11_118536975_+	SINE	Alu	Name=AluJo
ADediting_237944	chr11_118536987_+	SINE	Alu	Name=AluJo
ADediting_237945	chr11_118536992_+	SINE	Alu	Name=AluJo
ADediting_237946	chr11_118537063_+	SINE	Alu	Name=AluSx
ADediting_237947	chr11_118537077_+	SINE	Alu	Name=AluSx
ADediting_237948	chr11_118537085_+	SINE	Alu	Name=AluSx
ADediting_237949	chr11_118537086_+	SINE	Alu	Name=AluSx
ADediting_237950	chr11_118537108_+	SINE	Alu	Name=AluSx
ADediting_237951	chr11_118537126_+	SINE	Alu	Name=AluSx
ADediting_237952	chr11_118537131_+	SINE	Alu	Name=AluSx
ADediting_237953	chr11_118537133_+	SINE	Alu	Name=AluSx
ADediting_237954	chr11_118537134_+	SINE	Alu	Name=AluSx
ADediting_237955	chr11_118537142_+	SINE	Alu	Name=AluSx
ADediting_237956	chr11_118537155_+	SINE	Alu	Name=AluSx
ADediting_237957	chr11_118537157_+	SINE	Alu	Name=AluSx
ADediting_237958	chr11_118537164_+	SINE	Alu	Name=AluSx
ADediting_237959	chr11_118537165_+	SINE	Alu	Name=AluSx
ADediting_237960	chr11_118537170_+	SINE	Alu	Name=AluSx
ADediting_237961	chr11_118537176_+	SINE	Alu	Name=AluSx
ADediting_237962	chr11_118537180_+	SINE	Alu	Name=AluSx
ADediting_237963	chr11_118537187_+	SINE	Alu	Name=AluSx
ADediting_237964	chr11_118537190_+	SINE	Alu	Name=AluSx
ADediting_237965	chr11_118537194_+	SINE	Alu	Name=AluSx
ADediting_237966	chr11_118537202_+	SINE	Alu	Name=AluSx
ADediting_237967	chr11_118537207_+	SINE	Alu	Name=AluSx
ADediting_237968	chr11_118537226_+	SINE	Alu	Name=AluSx
ADediting_237969	chr11_118537230_+	SINE	Alu	Name=AluSx
ADediting_237970	chr11_118537243_+	SINE	Alu	Name=AluSx
ADediting_237971	chr11_118537247_+	SINE	Alu	Name=AluSx
ADediting_237972	chr11_118537253_+	SINE	Alu	Name=AluSx
ADediting_237973	chr11_118537254_+	SINE	Alu	Name=AluSx
ADediting_237974	chr11_118537262_+	SINE	Alu	Name=AluSx
ADediting_237975	chr11_118537266_+	SINE	Alu	Name=AluSx
ADediting_237976	chr11_118537269_+	SINE	Alu	Name=AluSx
ADediting_237977	chr11_118537273_+	SINE	Alu	Name=AluSx
ADediting_237978	chr11_118537282_+	SINE	Alu	Name=AluSx
ADediting_237979	chr11_118537286_+	SINE	Alu	Name=AluSx
ADediting_237980	chr11_118537291_+	SINE	Alu	Name=AluSx
ADediting_237981	chr11_118537293_+	SINE	Alu	Name=AluSx
ADediting_237982	chr11_118537302_+	SINE	Alu	Name=AluSx
ADediting_237983	chr11_118537323_+	SINE	Alu	Name=AluSx
ADediting_237984	chr11_118537328_+	SINE	Alu	Name=AluSx
ADediting_237985	chr11_118537329_+	SINE	Alu	Name=AluSx
ADediting_237986	chr11_118537357_+	SINE	Alu	Name=AluJo
ADediting_237987	chr11_118537359_+	SINE	Alu	Name=AluJo
ADediting_237988	chr11_118537361_+	SINE	Alu	Name=AluJo
ADediting_237989	chr11_118537363_+	SINE	Alu	Name=AluJo
ADediting_237990	chr11_118537371_+	SINE	Alu	Name=AluJo
ADediting_237991	chr11_118537376_+	SINE	Alu	Name=AluJo
ADediting_237992	chr11_118537789_+	SINE	Alu	Name=AluJb
ADediting_237993	chr11_118537795_+	SINE	Alu	Name=AluJb
ADediting_237994	chr11_118537796_+	SINE	Alu	Name=AluJb
ADediting_237995	chr11_118537818_+	SINE	Alu	Name=AluJb
ADediting_237996	chr11_118537841_+	SINE	Alu	Name=AluJb
ADediting_237997	chr11_118537844_+	SINE	Alu	Name=AluJb
ADediting_237998	chr11_118537849_+	SINE	Alu	Name=AluJb
ADediting_237999	chr11_118537850_+	SINE	Alu	Name=AluJb
ADediting_238000	chr11_118537855_+	SINE	Alu	Name=AluJb
ADediting_238001	chr11_118537865_+	SINE	Alu	Name=AluJb
ADediting_238002	chr11_118537867_+	SINE	Alu	Name=AluJb
ADediting_238003	chr11_118537873_+	SINE	Alu	Name=AluJb
ADediting_238004	chr11_118537881_+	SINE	Alu	Name=AluJb
ADediting_238005	chr11_118537887_+	SINE	Alu	Name=AluJb
ADediting_238006	chr11_118537890_+	SINE	Alu	Name=AluJb
ADediting_238007	chr11_118537891_+	SINE	Alu	Name=AluJb
ADediting_238008	chr11_118537892_+	SINE	Alu	Name=AluJb
ADediting_238009	chr11_118537893_+	SINE	Alu	Name=AluJb
ADediting_238010	chr11_118537895_+	SINE	Alu	Name=AluJb
ADediting_238011	chr11_118537897_+	SINE	Alu	Name=AluJb
ADediting_238012	chr11_118537898_+	SINE	Alu	Name=AluJb
ADediting_238013	chr11_118537899_+	SINE	Alu	Name=AluJb
ADediting_238014	chr11_118537900_+	SINE	Alu	Name=AluJb
ADediting_238015	chr11_118537904_+	SINE	Alu	Name=AluJb
ADediting_238016	chr11_118537930_+	SINE	Alu	Name=AluJb
ADediting_238017	chr11_118537936_+	SINE	Alu	Name=AluJb
ADediting_238018	chr11_118537940_+	SINE	Alu	Name=AluJb
ADediting_238019	chr11_118537957_+	SINE	Alu	Name=AluJb
ADediting_238020	chr11_118537958_+	SINE	Alu	Name=AluJb
ADediting_238021	chr11_118537966_+	SINE	Alu	Name=AluJb
ADediting_238022	chr11_118537971_+	SINE	Alu	Name=AluJb
ADediting_238023	chr11_118537976_+	SINE	Alu	Name=AluJb
ADediting_238024	chr11_118537983_+	SINE	Alu	Name=AluJb
ADediting_238025	chr11_118538000_+	SINE	Alu	Name=AluJb
ADediting_238026	chr11_118538002_+	SINE	Alu	Name=AluJb
ADediting_238027	chr11_118538005_+	SINE	Alu	Name=AluJb
ADediting_238028	chr11_118538191_+	SINE	Alu	Name=AluSx4
ADediting_238029	chr11_118538195_+	SINE	Alu	Name=AluSx4
ADediting_238030	chr11_118538197_+	SINE	Alu	Name=AluSx4
ADediting_238031	chr11_118538211_+	SINE	Alu	Name=AluSx4
ADediting_238032	chr11_118538236_+	SINE	Alu	Name=AluSx4
ADediting_238033	chr11_118538241_+	SINE	Alu	Name=AluSx4
ADediting_238034	chr11_118538246_+	SINE	Alu	Name=AluSx4
ADediting_238035	chr11_118538258_+	SINE	Alu	Name=AluSx4
ADediting_238036	chr11_118538265_+	SINE	Alu	Name=AluSx4
ADediting_238037	chr11_118538272_+	SINE	Alu	Name=AluSx4
ADediting_238038	chr11_118538275_+	SINE	Alu	Name=AluSx4
ADediting_238039	chr11_118538276_+	SINE	Alu	Name=AluSx4
ADediting_238040	chr11_118538289_+	SINE	Alu	Name=AluSx4
ADediting_238041	chr11_118538311_+	SINE	Alu	Name=AluSx4
ADediting_238042	chr11_118538313_+	SINE	Alu	Name=AluSx4
ADediting_238043	chr11_118538334_+	SINE	Alu	Name=AluSx4
ADediting_238044	chr11_118538335_+	SINE	Alu	Name=AluSx4
ADediting_238045	chr11_118538343_+	SINE	Alu	Name=AluSx4
ADediting_238046	chr11_118538352_+	SINE	Alu	Name=AluSx4
ADediting_238047	chr11_118538359_+	SINE	Alu	Name=AluSx4
ADediting_238048	chr11_118538366_+	SINE	Alu	Name=AluSx4
ADediting_238049	chr11_118538369_+	SINE	Alu	Name=AluSx4
ADediting_238050	chr11_118538371_+	SINE	Alu	Name=AluSx4
ADediting_238051	chr11_118538378_+	SINE	Alu	Name=AluSx4
ADediting_238052	chr11_118538406_+	SINE	Alu	Name=AluSx4
ADediting_238053	chr11_118538414_+	SINE	Alu	Name=AluSx4
ADediting_238054	chr11_118538427_+	SINE	Alu	Name=AluSx4
ADediting_238055	chr11_118538428_+	SINE	Alu	Name=AluSx4
ADediting_238056	chr11_118538429_+	SINE	Alu	Name=AluSx4
ADediting_238057	chr11_118538441_+	SINE	Alu	Name=AluSx4
ADediting_238058	chr11_118538615_+	SINE	Alu	Name=AluSz
ADediting_238059	chr11_118538619_+	SINE	Alu	Name=AluSz
ADediting_238060	chr11_118538631_+	SINE	Alu	Name=AluSz
ADediting_238061	chr11_118538637_+	SINE	Alu	Name=AluSz
ADediting_238062	chr11_118538638_+	SINE	Alu	Name=AluSz
ADediting_238063	chr11_118538664_+	SINE	Alu	Name=AluSz
ADediting_238064	chr11_118538694_+	SINE	Alu	Name=AluSz
ADediting_238065	chr11_118538707_+	SINE	Alu	Name=AluSz
ADediting_238066	chr11_118538709_+	SINE	Alu	Name=AluSz
ADediting_238067	chr11_118538714_+	SINE	Alu	Name=AluSz
ADediting_238068	chr11_118538715_+	SINE	Alu	Name=AluSz
ADediting_238069	chr11_118538717_+	SINE	Alu	Name=AluSz
ADediting_238070	chr11_118538722_+	SINE	Alu	Name=AluSz
ADediting_238071	chr11_118538731_+	SINE	Alu	Name=AluSz
ADediting_238072	chr11_118538732_+	SINE	Alu	Name=AluSz
ADediting_238073	chr11_118538733_+	SINE	Alu	Name=AluSz
ADediting_238074	chr11_118538734_+	SINE	Alu	Name=AluSz
ADediting_238075	chr11_118538735_+	SINE	Alu	Name=AluSz
ADediting_238076	chr11_118538737_+	SINE	Alu	Name=AluSz
ADediting_238077	chr11_118538739_+	SINE	Alu	Name=AluSz
ADediting_238078	chr11_118538740_+	SINE	Alu	Name=AluSz
ADediting_238079	chr11_118538741_+	SINE	Alu	Name=AluSz
ADediting_238080	chr11_118538742_+	SINE	Alu	Name=AluSz
ADediting_238081	chr11_118538743_+	SINE	Alu	Name=AluSz
ADediting_238082	chr11_118538744_+	SINE	Alu	Name=AluSz
ADediting_238083	chr11_118538746_+	SINE	Alu	Name=AluSz
ADediting_238084	chr11_118538754_+	SINE	Alu	Name=AluSz
ADediting_238085	chr11_118538772_+	SINE	Alu	Name=AluSz
ADediting_238086	chr11_118538773_+	SINE	Alu	Name=AluSz
ADediting_238087	chr11_118538778_+	SINE	Alu	Name=AluSz
ADediting_238088	chr11_118538782_+	SINE	Alu	Name=AluSz
ADediting_238089	chr11_118538795_+	SINE	Alu	Name=AluSz
ADediting_238090	chr11_118538799_+	SINE	Alu	Name=AluSz
ADediting_238091	chr11_118538814_+	SINE	Alu	Name=AluSz
ADediting_238092	chr11_118538817_+	SINE	Alu	Name=AluSz
ADediting_238093	chr11_118538820_+	SINE	Alu	Name=AluSz
ADediting_238094	chr11_118538824_+	SINE	Alu	Name=AluSz
ADediting_238095	chr11_118538842_+	SINE	Alu	Name=AluSz
ADediting_238096	chr11_118538844_+	SINE	Alu	Name=AluSz
ADediting_238097	chr11_118538847_+	SINE	Alu	Name=AluSz
ADediting_238098	chr11_118538852_+	SINE	Alu	Name=AluSz
ADediting_238099	chr11_118538871_+	SINE	Alu	Name=AluSz
ADediting_238100	chr11_118538880_+	SINE	Alu	Name=AluSz
ADediting_238101	chr11_118539219_+	SINE	Alu	Name=AluSc
ADediting_238102	chr11_118539232_+	SINE	Alu	Name=AluSc
ADediting_238103	chr11_118539242_+	SINE	Alu	Name=AluSc
ADediting_238104	chr11_118539254_+	SINE	Alu	Name=AluSc
ADediting_238105	chr11_118539268_+	SINE	Alu	Name=AluSc
ADediting_238106	chr11_118539285_+	SINE	Alu	Name=AluSc
ADediting_238107	chr11_118539293_+	SINE	Alu	Name=AluSc
ADediting_238108	chr11_118539294_+	SINE	Alu	Name=AluSc
ADediting_238109	chr11_118539297_+	SINE	Alu	Name=AluSc
ADediting_238110	chr11_118539307_+	SINE	Alu	Name=AluSc
ADediting_238111	chr11_118539357_+	SINE	Alu	Name=AluSc
ADediting_238112	chr11_118539365_+	SINE	Alu	Name=AluSc
ADediting_238113	chr11_118539377_+	SINE	Alu	Name=AluSc
ADediting_238114	chr11_118539409_+	SINE	Alu	Name=AluSc
ADediting_238115	chr11_118539426_+	SINE	Alu	Name=AluSc
ADediting_238116	chr11_118539427_+	SINE	Alu	Name=AluSc
ADediting_238117	chr11_118539440_+	SINE	Alu	Name=AluSc
ADediting_238118	chr11_118539446_+	SINE	Alu	Name=AluSc
ADediting_238119	chr11_118539747_+	SINE	Alu	Name=AluSz
ADediting_238120	chr11_118539749_+	SINE	Alu	Name=AluSz
ADediting_238121	chr11_118539759_+	SINE	Alu	Name=AluSz
ADediting_238122	chr11_118539765_+	SINE	Alu	Name=AluSz
ADediting_238123	chr11_118539766_+	SINE	Alu	Name=AluSz
ADediting_238124	chr11_118539768_+	SINE	Alu	Name=AluSz
ADediting_238125	chr11_118539786_+	SINE	Alu	Name=AluSz
ADediting_238126	chr11_118539796_+	SINE	Alu	Name=AluSz
ADediting_238127	chr11_118539811_+	SINE	Alu	Name=AluSz
ADediting_238128	chr11_118539825_+	SINE	Alu	Name=AluSz
ADediting_238129	chr11_118539830_+	SINE	Alu	Name=AluSz
ADediting_238130	chr11_118539835_+	SINE	Alu	Name=AluSz
ADediting_238131	chr11_118539837_+	SINE	Alu	Name=AluSz
ADediting_238132	chr11_118539845_+	SINE	Alu	Name=AluSz
ADediting_238133	chr11_118539850_+	SINE	Alu	Name=AluSz
ADediting_238134	chr11_118539856_+	SINE	Alu	Name=AluSz
ADediting_238135	chr11_118539860_+	SINE	Alu	Name=AluSz
ADediting_238136	chr11_118539868_+	SINE	Alu	Name=AluSz
ADediting_238137	chr11_118539871_+	SINE	Alu	Name=AluSz
ADediting_238138	chr11_118539874_+	SINE	Alu	Name=AluSz
ADediting_238139	chr11_118539878_+	SINE	Alu	Name=AluSz
ADediting_238140	chr11_118539882_+	SINE	Alu	Name=AluSz
ADediting_238141	chr11_118539900_+	SINE	Alu	Name=AluSz
ADediting_238142	chr11_118539914_+	SINE	Alu	Name=AluSz
ADediting_238143	chr11_118539941_+	SINE	Alu	Name=AluSz
ADediting_238144	chr11_118539942_+	SINE	Alu	Name=AluSz
ADediting_238145	chr11_118539976_+	SINE	Alu	Name=AluSz
ADediting_238146	chr11_118540005_+	SINE	Alu	Name=AluSz
ADediting_238147	chr11_118540133_+	SINE	Alu	Name=AluYc
ADediting_238148	chr11_118540153_+	SINE	Alu	Name=AluYc
ADediting_238149	chr11_118540173_+	SINE	Alu	Name=AluYc
ADediting_238150	chr11_118540174_+	SINE	Alu	Name=AluYc
ADediting_238151	chr11_118540190_+	SINE	Alu	Name=AluYc
ADediting_238152	chr11_118540227_+	SINE	Alu	Name=AluYc
ADediting_238153	chr11_118540239_+	SINE	Alu	Name=AluYc
ADediting_238154	chr11_118541279_+	SINE	Alu	Name=AluY
ADediting_238155	chr11_118541315_+	SINE	Alu	Name=AluY
ADediting_238156	chr11_118541341_+	SINE	Alu	Name=AluY
ADediting_238157	chr11_118541870_+	SINE	Alu	Name=AluJb
ADediting_238158	chr11_118541907_+	SINE	Alu	Name=AluJb
ADediting_238159	chr11_118542030_+	SINE	Alu	Name=AluJb
ADediting_238160	chr11_118542655_+	SINE	Alu	Name=AluSx
ADediting_238161	chr11_118543588_+	SINE	Alu	Name=AluSx1
ADediting_238162	chr11_118543620_+	SINE	Alu	Name=AluSx1
ADediting_238163	chr11_118543876_+	SINE	Alu	Name=AluSx4
ADediting_1525736	chr11_118536268_+	SINE	Alu	Name=AluSp
ADediting_1525737	chr11_118537145_+	SINE	Alu	Name=AluSx
ADediting_1525738	chr11_118537191_+	SINE	Alu	Name=AluSx
ADediting_1525739	chr11_118537301_+	SINE	Alu	Name=AluSx
ADediting_1525740	chr11_118537306_+	SINE	Alu	Name=AluSx
ADediting_1525741	chr11_118537901_+	SINE	Alu	Name=AluJb
ADediting_1525742	chr11_118537947_+	SINE	Alu	Name=AluJb
ADediting_1525743	chr11_118537953_+	SINE	Alu	Name=AluJb
ADediting_1525744	chr11_118538356_+	SINE	Alu	Name=AluSx4
ADediting_1525745	chr11_118538450_+	SINE	Alu	Name=AluSx4
ADediting_1525746	chr11_118539757_+	SINE	Alu	Name=AluSz
ADediting_1525747	chr11_118539801_+	SINE	Alu	Name=AluSz
ADediting_1525748	chr11_118539806_+	SINE	Alu	Name=AluSz
ADediting_1525749	chr11_118539843_+	SINE	Alu	Name=AluSz
ADediting_1525750	chr11_118542541_+	SINE	Alu	Name=AluJr
ADediting_1525751	chr11_118542770_+	SINE	Alu	Name=AluSx
ADediting_1525752	chr11_118542986_+	SINE	Alu	Name=AluSc8

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RNA A-to-I editing events in the alternative splicing sites for TMEM25

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for TMEM25

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

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Protein coding region RNA A-to-I editings for TMEM25

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TMEM25

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1337757

chr7_5495852_-

ENSG00000149582.16

ENST00000442938.6

TMEM25-206

hsa-miR-589-3p

chr11

118547146

118547153

8mer-1a

118547130

118547153

142

-14.5

ADediting_1556067

chr19_40282625_-

ENSG00000149582.16

ENST00000313236.10

TMEM25-201

hsa-miR-641

chr11

118535508

118535514

7mer-m8

118535491

118535515

157

-19.32

ADediting_1556067

chr19_40282625_-

ENSG00000149582.16

ENST00000354064.11

TMEM25-202

hsa-miR-641

chr11

118535508

118535514

7mer-m8

118535491

118535515

157

-19.32

ADediting_1556067

chr19_40282625_-

ENSG00000149582.16

ENST00000359862.8

TMEM25-204

hsa-miR-641

chr11

118535508

118535514

7mer-m8

118535491

118535515

157

-19.32

ADediting_1556067

chr19_40282625_-

ENSG00000149582.16

ENST00000411589.6

TMEM25-205

hsa-miR-641

chr11

118535508

118535514

7mer-m8

118535491

118535515

157

-19.32

ADediting_1556067

chr19_40282625_-

ENSG00000149582.16

ENST00000524725.5

TMEM25-208

hsa-miR-641

chr11

118535508

118535514

7mer-m8

118535491

118535515

157

-19.32

ADediting_286380

chr11_79422188_-

ENSG00000149582.16

ENST00000442938.6

TMEM25-206

hsa-miR-5579-3p

chr11

118546597

118546603

7mer-m8

118546586

118546604

151

-13.03

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_107020

chr1_37500952_-

ENSG00000149582.16

ENST00000313236.10

TMEM25-201

hsa-miR-5581-3p

chr11

118535001

118535007

7mer-m8

118534987

118535008

140

-17.68

ADediting_107020

chr1_37500952_-

ENSG00000149582.16

ENST00000354064.11

TMEM25-202

hsa-miR-5581-3p

chr11

118535001

118535007

7mer-m8

118534987

118535008

140

-17.68

ADediting_107020

chr1_37500952_-

ENSG00000149582.16

ENST00000359862.8

TMEM25-204

hsa-miR-5581-3p

chr11

118535001

118535007

7mer-m8

118534987

118535008

140

-17.68

ADediting_107020

chr1_37500952_-

ENSG00000149582.16

ENST00000411589.6

TMEM25-205

hsa-miR-5581-3p

chr11

118535001

118535007

7mer-m8

118534987

118535008

140

-17.68

ADediting_107020

chr1_37500952_-

ENSG00000149582.16

ENST00000524725.5

TMEM25-208

hsa-miR-5581-3p

chr11

118535001

118535007

7mer-m8

118534987

118535008

140

-17.68

ADediting_1391023

chr8_140732605_-

ENSG00000149582.16

ENST00000442938.6

TMEM25-206

hsa-miR-151a-3p

chr11

118546606

118546612

7mer-m8

118546594

118546613

148

-13.32

ADediting_843620

chr2_207754818_+

ENSG00000149582.16

ENST00000354284.8

TMEM25-203

hsa-miR-4775

chr11

118546337

118546343

7mer-m8

118546322

118546344

153

-7.81

ADediting_843620

chr2_207754818_+

ENSG00000149582.16

ENST00000442938.6

TMEM25-206

hsa-miR-4775

chr11

118546337

118546343

7mer-m8

118546322

118546344

153

-7.81

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TMEM25

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID

ENST

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in lncRNA.

ADeditom_ID

ENST

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for TMEM25

Correlation between ADAR gene expression and RNA editing frequency

Tissue	ADeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	ADediting_237932	chr11_118536113_+	6.20324623511535e-09	0.322495927244256	5.09409586609862e-11	0.36179514656163	0.0108728393131423	0.144470231520431
DLPFC	ADediting_237934	chr11_118536140_+	7.91262007047407e-07	0.27607809515765	1.3874179698235e-08	0.315328530380055	0.0105735792307923	0.145016078172489
DLPFC	ADediting_237936	chr11_118536445_+	1.87573100581245e-06	0.266864539085834	5.84236089196139e-08	0.302033921230974	5.18176577100683e-05	0.227761436434001
DLPFC	ADediting_237937	chr11_118536911_+	1.14302590117306e-12	0.389452758659054	3.25491055579643e-12	0.38208742776405	0.975407441727778	-0.00175796104083531
TCX	ADediting_237937	chr11_118536911_+	4.36055750104049e-05	0.327243651910123	1.15449113610662e-06	0.384899167616523	0.0426376660055185	-0.165763372945378
DLPFC	ADediting_237943	chr11_118536975_+	1.18297071407602e-11	0.372742868510121	6.21785625739753e-12	0.37743773490687	0.333717201117968	0.055083067412138
TCX	ADediting_237943	chr11_118536975_+	0.000387474272350263	0.286046335578703	4.79383912254389e-08	0.427684021943767	0.0487692899099454	-0.161193732339143
DLPFC	ADediting_237945	chr11_118536992_+	8.07432227424716e-10	0.339857534163386	1.26290448738641e-08	0.316175588172005	0.259218235712883	0.0642731430273511
TCX	ADediting_237945	chr11_118536992_+	7.65760621477005e-06	0.356264403919333	7.60225539385322e-10	0.475778498327186	0.0171889783540709	-0.194309291088632
DLPFC	ADediting_237969	chr11_118537230_+	7.71914812635918e-06	0.250975899925069	4.94597018018436e-10	0.343874535825066	0.00698610115614734	0.152923675797304
DLPFC	ADediting_237989	chr11_118537363_+	1.85827285780861e-08	0.312679216677692	3.25347534859246e-09	0.328109619471289	0.0137123130997569	0.139862568532079
TCX	ADediting_237989	chr11_118537363_+	0.00962422971684799	0.210777533877136	1.0911455760282e-05	0.350585318729613	0.142249498934001	-0.120388919111232
DLPFC	ADediting_237992	chr11_118537789_+	8.71541101734426e-08	0.298214397866486	1.17916062399439e-09	0.336713855384043	0.0860705238349429	0.0976520249009706
TCX	ADediting_237992	chr11_118537789_+	0.00492226618707199	0.228471476980103	3.52330367893463e-06	0.368346291028454	0.0325534898551031	-0.174647371051734
CER	ADediting_238002	chr11_118537867_+	1.76163276983541e-05	0.342724414255042	0.00398012848298627	0.233816871653747	0.499325220208458	-0.0555808774998888
DLPFC	ADediting_238012	chr11_118537898_+	3.35794227712964e-06	0.260449329170188	0.000609615439312246	0.193594891428369	4.63034734637801e-08	0.304229226778913
DLPFC	ADediting_238016	chr11_118537930_+	1.7229485576584e-07	0.291575288404097	6.86768368391855e-05	0.224118314175002	2.95859301301243e-10	0.348025594919313
TCX	ADediting_238016	chr11_118537930_+	0.00141992568871958	0.258236012043859	0.000101088854371539	0.312095181269102	0.0846650437635625	-0.141258243533756
CER	ADediting_238019	chr11_118537957_+	3.58009122469635e-05	0.330683331968961	0.00607437814617225	0.223061559055564	0.806295145744477	-0.0201880158131755
DLPFC	ADediting_238045	chr11_118538343_+	0.0751051743303811	0.101236186435623	0.987000144784315	0.000929169036431121	2.59536610396514e-11	0.36690305787458
DLPFC	ADediting_238047	chr11_118538359_+	0.000688498431089468	0.191755685004497	0.0567385846165584	0.108333816213091	2.28953400763383e-10	0.350074040202919
TCX	ADediting_238056	chr11_118538429_+	0.00049663112891772	0.280951310470246	3.62771674647797e-05	0.33045411948598	0.154744016327128	-0.11676421547343
DLPFC	ADediting_238084	chr11_118538754_+	0.00766343852487172	0.151189043644467	0.200090627425027	0.0729703085432597	2.48574444804265e-09	0.330417528658722
DLPFC	ADediting_238111	chr11_118539357_+	0.00130171836540773	0.181843421538853	0.110775368429847	0.0907535072876043	3.90355204509302e-10	0.345794108095319
DLPFC	ADediting_238121	chr11_118539759_+	1.07275014256974e-09	0.337502279481213	1.11000319687283e-10	0.355780554643504	0.00564426262806325	0.156857759903379
TCX	ADediting_238121	chr11_118539759_+	0.000173234673750581	0.301945055030145	1.22948478648924e-05	0.348646043713153	0.018521249837103	-0.192099884751851
DLPFC	ADediting_238138	chr11_118539874_+	0.00580742461296516	0.156337136886845	0.070938887211338	0.102709948193569	3.68128625925154e-08	0.306377343558543
DLPFC	ADediting_238139	chr11_118539878_+	9.7272011651184e-05	0.219532295021951	0.00156005840795465	0.178932581970242	1.2520655136783e-08	0.316253104553997
DLPFC	ADediting_238144	chr11_118539942_+	0.607252630061453	0.0293053017383903	0.108726492196887	-0.0912763506001205	1.7965033305751e-17	0.457890863312408
DLPFC	ADediting_238147	chr11_118540133_+	0.000127513119551331	0.21589870566321	5.57734699708168e-08	0.302473690431364	0.00447973653028208	0.161024317293817

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	1.52104754650365e-73	0.810558374460104	2.93000241361683e-138	0.932495578223016	0.120053210220555	0.0884767139916874
AC	2.01199427647128e-88	0.893962335459809	3.64337387277722e-86	0.889144766210832	8.90212434113969e-07	0.304913533356907
PCC	1.52302089137527e-57	0.861548933201055	9.41077294845109e-77	0.915695650826707	0.0856139457385598	0.124715227954802
CER	1.30302895984974e-31	0.777475405813511	4.30544547487057e-38	0.822473305394544	0.0951910908124459	0.136746080692027
TCX	4.85906658863782e-27	0.737780854865687	7.87885494917923e-48	0.872265739511155	0.00441245191067377	-0.231237051202557
FP	1.79967494910447e-22	0.646794048221059	2.903841398813e-30	0.72458907379528	0.108873057319802	0.120581484614756
IFG	1.53929810198029e-07	0.839673348250938	2.76731058053199e-07	0.830589918408291	0.491737481900198	0.144169463840377
PG	4.79296539975176e-11	0.458268924791682	1.32165973069962e-14	0.525652717704659	0.135390008802874	-0.109894241866702
STG	7.38911827674054e-19	0.78668542334477	4.12855837191496e-18	0.776314392559892	0.408425689342311	-0.0913770590997435

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Relation with AD stages for TMEM25

Correlation between AD stages and RNA editing frequency

Tissue

ADeditomID

position

P-val

Coeff.

Correlation between AD stages and this gene's expression

Tissue	P-val	Coeff.
PG	1.63693277806392e-05	-0.310240480888273

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RelatedDrugs for TMEM25

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TMEM25

Diseases associated with this gene.
(DisGeNet 4.0)

Gene	Disease ID	Disease name	# pubmeds	Source
TMEM25	C0006142	Malignant neoplasm of breast	1	CTD_human
TMEM25	C0678222	Breast Carcinoma	1	CTD_human
TMEM25	C1257931	Mammary Neoplasms, Human	1	CTD_human
TMEM25	C1458155	Mammary Neoplasms	1	CTD_human

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Gene summary for TMEM25

RNA A-to-I events for TMEM25

RNA editing positional annotations for TMEM25 using Annovar

RNA A-to-I editing events in the alternative splicing sites for TMEM25

Differntial gene expression between RNA A-to-I edited versus non-edited samples for TMEM25

Protein coding region RNA A-to-I editings for TMEM25

The effects of the RNA editing to the miRNA binding sites for TMEM25

The effects of the RNA editing to the stability of the RNA structures for TMEM25

Relation with ADAR for TMEM25

Relation with AD stages for TMEM25

RelatedDrugs for TMEM25

RelatedDiseases for TMEM25

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene