|
||||||
|
 | |
| |
| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
| |
| |
| The effects of the RNA editing to the stability of the RNA structures |
| |
| |
| |
|
Gene summary for ZNF577 |
 Gene summary |
| Gene information | Gene symbol | ZNF577 | Gene ID | 84765 |
| Gene name | zinc finger protein 577 | |
| Synonyms | - | |
| Cytomap | 19q13.41 | |
| Type of gene | protein-coding | |
| Description | zinc finger protein 577 | |
| Modification date | 20200313 | |
| UniProtAcc | Q9BSK1, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for ZNF577 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_776282(51853110, -), ADediting_776283(51853119, -), ADediting_776284(51853130, -), ADediting_776285(51853138, -), ADediting_776286(51857216, -), ADediting_776287(51859361, -), ADediting_776288(51859362, -), ADediting_776289(51861191, -), ADediting_776290(51861192, -), ADediting_776291(51861215, -), ADediting_776292(51861216, -), ADediting_776293(51861224, -), ADediting_776294(51861230, -), ADediting_776295(51861243, -), ADediting_776296(51861247, -), ADediting_776297(51861250, -), ADediting_776298(51861256, -), ADediting_776299(51861257, -), ADediting_776300(51861263, -), ADediting_776301(51861324, -), ADediting_776302(51861329, -), ADediting_776303(51861334, -), ADediting_776304(51861373, -), ADediting_776305(51861377, -), ADediting_776306(51861380, -), ADediting_776307(51861403, -), ADediting_776308(51865164, -), ADediting_776309(51865173, -), ADediting_776310(51865180, -), ADediting_776311(51865181, -), ADediting_776312(51865188, -), ADediting_776313(51865193, -), ADediting_776314(51865199, -), ADediting_776315(51865202, -), ADediting_776316(51865219, -), ADediting_776317(51865224, -), ADediting_776318(51865253, -), ADediting_776319(51865261, -), ADediting_776320(51865267, -), ADediting_776321(51865270, -), ADediting_776322(51865272, -), ADediting_776323(51865273, -), ADediting_776324(51865274, -), ADediting_776325(51865275, -), ADediting_776326(51865276, -), ADediting_776327(51865279, -), ADediting_776328(51865290, -), ADediting_776329(51865310, -), ADediting_776330(51865315, -), ADediting_776331(51865316, -), ADediting_776332(51865322, -), ADediting_776333(51865324, -), ADediting_776334(51865334, -), ADediting_776335(51865369, -), ADediting_776336(51865857, -), ADediting_776337(51865860, -), ADediting_776338(51865873, -), ADediting_776339(51865882, -), ADediting_776340(51865912, -), ADediting_776341(51865932, -), ADediting_776342(51865949, -), ADediting_776343(51865952, -), ADediting_776344(51865993, -), ADediting_776345(51866028, -), ADediting_776346(51866029, -), ADediting_776347(51866032, -), ADediting_776348(51866063, -), ADediting_776349(51866349, -), ADediting_776350(51866719, -), ADediting_776351(51866737, -), ADediting_776352(51866738, -), ADediting_776353(51866747, -), ADediting_776354(51866765, -), ADediting_776355(51866778, -), ADediting_776356(51866779, -), ADediting_776357(51866858, -), ADediting_776358(51866859, -), ADediting_776359(51866869, -), ADediting_776360(51866894, -), ADediting_776361(51866898, -), ADediting_776362(51866918, -), ADediting_776363(51866919, -), ADediting_776364(51866937, -), ADediting_776365(51866943, -), ADediting_776366(51867531, -), ADediting_776367(51867540, -), ADediting_776368(51867685, -), ADediting_776369(51867702, -), ADediting_776370(51871136, -), ADediting_776371(51871166, -), ADediting_776372(51871180, -), ADediting_776373(51871189, -), ADediting_776374(51871205, -), ADediting_776375(51871210, -), ADediting_776376(51871223, -), ADediting_776377(51871224, -), ADediting_776378(51871228, -), ADediting_776379(51871241, -), ADediting_776380(51871251, -), ADediting_776381(51871253, -), ADediting_776382(51871291, -), ADediting_776383(51871316, -), ADediting_776384(51871359, -), ADediting_776385(51871363, -), ADediting_776386(51871367, -), ADediting_776387(51871368, -), ADediting_776388(51871381, -), ADediting_776389(51871389, -), ADediting_776390(51871390, -), ADediting_776391(51871396, -), ADediting_776392(51871398, -), ADediting_776393(51871406, -), ADediting_776394(51871408, -), ADediting_776395(51871412, -), ADediting_1557822(51861387, -), ADediting_1557823(51865228, -), ADediting_1557824(51865233, -), ADediting_1557825(51865234, -), ADediting_1557826(51865264, -), ADediting_1557827(51865265, -), ADediting_1557828(51865291, -), ADediting_1557829(51865298, -), ADediting_1557830(51865300, -), ADediting_1557831(51865364, -), ADediting_1557832(51865370, -), ADediting_1557833(51865923, -), ADediting_1557834(51865935, -), ADediting_1557835(51865967, -), ADediting_1557836(51866058, -), ADediting_1557837(51866729, -), ADediting_1557838(51866777, -), ADediting_1557839(51866790, -), ADediting_1557840(51866799, -), ADediting_1557841(51866802, -), ADediting_1557842(51866807, -), ADediting_1557843(51866816, -), ADediting_1557844(51866819, -), ADediting_1557845(51866825, -), ADediting_1557846(51866834, -), ADediting_1557847(51867703, -), ADediting_1557848(51867722, -), ADediting_1557849(51870169, -), ADediting_1557850(51871287, -), ADediting_1557851(51871289, -), ADediting_1557852(51871290, -), ADediting_1557853(51871384, -), ADediting_1557854(51879068, -), ADediting_1631640(51836881, -), |
Top |
RNA editing positional annotations for ZNF577 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_776282 | chr19_51853110_- | intronic |
| ADediting_776283 | chr19_51853119_- | intronic |
| ADediting_776284 | chr19_51853130_- | intronic |
| ADediting_776285 | chr19_51853138_- | intronic |
| ADediting_776286 | chr19_51857216_- | intronic |
| ADediting_776287 | chr19_51859361_- | intronic |
| ADediting_776288 | chr19_51859362_- | intronic |
| ADediting_776289 | chr19_51861191_- | ncRNA_exonic |
| ADediting_776290 | chr19_51861192_- | ncRNA_exonic |
| ADediting_776291 | chr19_51861215_- | ncRNA_exonic |
| ADediting_776292 | chr19_51861216_- | ncRNA_exonic |
| ADediting_776293 | chr19_51861224_- | ncRNA_exonic |
| ADediting_776294 | chr19_51861230_- | ncRNA_exonic |
| ADediting_776295 | chr19_51861243_- | ncRNA_exonic |
| ADediting_776296 | chr19_51861247_- | ncRNA_exonic |
| ADediting_776297 | chr19_51861250_- | ncRNA_exonic |
| ADediting_776298 | chr19_51861256_- | ncRNA_exonic |
| ADediting_776299 | chr19_51861257_- | ncRNA_exonic |
| ADediting_776300 | chr19_51861263_- | ncRNA_exonic |
| ADediting_776301 | chr19_51861324_- | ncRNA_exonic |
| ADediting_776302 | chr19_51861329_- | ncRNA_exonic |
| ADediting_776303 | chr19_51861334_- | ncRNA_exonic |
| ADediting_776304 | chr19_51861373_- | ncRNA_exonic |
| ADediting_776305 | chr19_51861377_- | ncRNA_exonic |
| ADediting_776306 | chr19_51861380_- | ncRNA_exonic |
| ADediting_776307 | chr19_51861403_- | ncRNA_exonic |
| ADediting_776308 | chr19_51865164_- | intronic |
| ADediting_776309 | chr19_51865173_- | intronic |
| ADediting_776310 | chr19_51865180_- | intronic |
| ADediting_776311 | chr19_51865181_- | intronic |
| ADediting_776312 | chr19_51865188_- | intronic |
| ADediting_776313 | chr19_51865193_- | intronic |
| ADediting_776314 | chr19_51865199_- | intronic |
| ADediting_776315 | chr19_51865202_- | intronic |
| ADediting_776316 | chr19_51865219_- | intronic |
| ADediting_776317 | chr19_51865224_- | intronic |
| ADediting_776318 | chr19_51865253_- | intronic |
| ADediting_776319 | chr19_51865261_- | intronic |
| ADediting_776320 | chr19_51865267_- | intronic |
| ADediting_776321 | chr19_51865270_- | intronic |
| ADediting_776322 | chr19_51865272_- | intronic |
| ADediting_776323 | chr19_51865273_- | intronic |
| ADediting_776324 | chr19_51865274_- | intronic |
| ADediting_776325 | chr19_51865275_- | intronic |
| ADediting_776326 | chr19_51865276_- | intronic |
| ADediting_776327 | chr19_51865279_- | intronic |
| ADediting_776328 | chr19_51865290_- | intronic |
| ADediting_776329 | chr19_51865310_- | intronic |
| ADediting_776330 | chr19_51865315_- | intronic |
| ADediting_776331 | chr19_51865316_- | intronic |
| ADediting_776332 | chr19_51865322_- | intronic |
| ADediting_776333 | chr19_51865324_- | intronic |
| ADediting_776334 | chr19_51865334_- | intronic |
| ADediting_776335 | chr19_51865369_- | intronic |
| ADediting_776336 | chr19_51865857_- | intronic |
| ADediting_776337 | chr19_51865860_- | intronic |
| ADediting_776338 | chr19_51865873_- | intronic |
| ADediting_776339 | chr19_51865882_- | intronic |
| ADediting_776340 | chr19_51865912_- | intronic |
| ADediting_776341 | chr19_51865932_- | intronic |
| ADediting_776342 | chr19_51865949_- | intronic |
| ADediting_776343 | chr19_51865952_- | intronic |
| ADediting_776344 | chr19_51865993_- | intronic |
| ADediting_776345 | chr19_51866028_- | intronic |
| ADediting_776346 | chr19_51866029_- | intronic |
| ADediting_776347 | chr19_51866032_- | intronic |
| ADediting_776348 | chr19_51866063_- | intronic |
| ADediting_776349 | chr19_51866349_- | intronic |
| ADediting_776350 | chr19_51866719_- | intronic |
| ADediting_776351 | chr19_51866737_- | intronic |
| ADediting_776352 | chr19_51866738_- | intronic |
| ADediting_776353 | chr19_51866747_- | intronic |
| ADediting_776354 | chr19_51866765_- | intronic |
| ADediting_776355 | chr19_51866778_- | intronic |
| ADediting_776356 | chr19_51866779_- | intronic |
| ADediting_776357 | chr19_51866858_- | intronic |
| ADediting_776358 | chr19_51866859_- | intronic |
| ADediting_776359 | chr19_51866869_- | intronic |
| ADediting_776360 | chr19_51866894_- | intronic |
| ADediting_776361 | chr19_51866898_- | intronic |
| ADediting_776362 | chr19_51866918_- | intronic |
| ADediting_776363 | chr19_51866919_- | intronic |
| ADediting_776364 | chr19_51866937_- | intronic |
| ADediting_776365 | chr19_51866943_- | intronic |
| ADediting_776366 | chr19_51867531_- | intronic |
| ADediting_776367 | chr19_51867540_- | intronic |
| ADediting_776368 | chr19_51867685_- | intronic |
| ADediting_776369 | chr19_51867702_- | intronic |
| ADediting_776370 | chr19_51871136_- | intronic |
| ADediting_776371 | chr19_51871166_- | intronic |
| ADediting_776372 | chr19_51871180_- | intronic |
| ADediting_776373 | chr19_51871189_- | intronic |
| ADediting_776374 | chr19_51871205_- | intronic |
| ADediting_776375 | chr19_51871210_- | intronic |
| ADediting_776376 | chr19_51871223_- | intronic |
| ADediting_776377 | chr19_51871224_- | intronic |
| ADediting_776378 | chr19_51871228_- | intronic |
| ADediting_776379 | chr19_51871241_- | intronic |
| ADediting_776380 | chr19_51871251_- | intronic |
| ADediting_776381 | chr19_51871253_- | intronic |
| ADediting_776382 | chr19_51871291_- | UTR3 |
| ADediting_776383 | chr19_51871316_- | UTR3 |
| ADediting_776384 | chr19_51871359_- | UTR3 |
| ADediting_776385 | chr19_51871363_- | UTR3 |
| ADediting_776386 | chr19_51871367_- | UTR3 |
| ADediting_776387 | chr19_51871368_- | UTR3 |
| ADediting_776388 | chr19_51871381_- | UTR3 |
| ADediting_776389 | chr19_51871389_- | UTR3 |
| ADediting_776390 | chr19_51871390_- | UTR3 |
| ADediting_776391 | chr19_51871396_- | UTR3 |
| ADediting_776392 | chr19_51871398_- | UTR3 |
| ADediting_776393 | chr19_51871406_- | UTR3 |
| ADediting_776394 | chr19_51871408_- | UTR3 |
| ADediting_776395 | chr19_51871412_- | UTR3 |
| ADediting_1557822 | chr19_51861387_- | ncRNA_exonic |
| ADediting_1557823 | chr19_51865228_- | intronic |
| ADediting_1557824 | chr19_51865233_- | intronic |
| ADediting_1557825 | chr19_51865234_- | intronic |
| ADediting_1557826 | chr19_51865264_- | intronic |
| ADediting_1557827 | chr19_51865265_- | intronic |
| ADediting_1557828 | chr19_51865291_- | intronic |
| ADediting_1557829 | chr19_51865298_- | intronic |
| ADediting_1557830 | chr19_51865300_- | intronic |
| ADediting_1557831 | chr19_51865364_- | intronic |
| ADediting_1557832 | chr19_51865370_- | intronic |
| ADediting_1557833 | chr19_51865923_- | intronic |
| ADediting_1557834 | chr19_51865935_- | intronic |
| ADediting_1557835 | chr19_51865967_- | intronic |
| ADediting_1557836 | chr19_51866058_- | intronic |
| ADediting_1557837 | chr19_51866729_- | intronic |
| ADediting_1557838 | chr19_51866777_- | intronic |
| ADediting_1557839 | chr19_51866790_- | intronic |
| ADediting_1557840 | chr19_51866799_- | intronic |
| ADediting_1557841 | chr19_51866802_- | intronic |
| ADediting_1557842 | chr19_51866807_- | intronic |
| ADediting_1557843 | chr19_51866816_- | intronic |
| ADediting_1557844 | chr19_51866819_- | intronic |
| ADediting_1557845 | chr19_51866825_- | intronic |
| ADediting_1557846 | chr19_51866834_- | intronic |
| ADediting_1557847 | chr19_51867703_- | intronic |
| ADediting_1557848 | chr19_51867722_- | intronic |
| ADediting_1557849 | chr19_51870169_- | intronic |
| ADediting_1557850 | chr19_51871287_- | UTR3 |
| ADediting_1557851 | chr19_51871289_- | UTR3 |
| ADediting_1557852 | chr19_51871290_- | UTR3 |
| ADediting_1557853 | chr19_51871384_- | UTR3 |
| ADediting_1557854 | chr19_51879068_- | intronic |
| ADediting_1631640 | chr19_51836881_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_776282 | chr19_51853110_- | SINE | Alu | Name=AluSq |
| ADediting_776283 | chr19_51853119_- | SINE | Alu | Name=AluSq |
| ADediting_776284 | chr19_51853130_- | SINE | Alu | Name=AluSq |
| ADediting_776285 | chr19_51853138_- | SINE | Alu | Name=AluSq |
| ADediting_776286 | chr19_51857216_- | SINE | Alu | Name=AluSc |
| ADediting_776287 | chr19_51859361_- | LINE | L1 | Name=L1MB5 |
| ADediting_776288 | chr19_51859362_- | LINE | L1 | Name=L1MB5 |
| ADediting_776289 | chr19_51861191_- | SINE | Alu | Name=AluSz |
| ADediting_776290 | chr19_51861192_- | SINE | Alu | Name=AluSz |
| ADediting_776291 | chr19_51861215_- | SINE | Alu | Name=AluSz |
| ADediting_776292 | chr19_51861216_- | SINE | Alu | Name=AluSz |
| ADediting_776293 | chr19_51861224_- | SINE | Alu | Name=AluSz |
| ADediting_776294 | chr19_51861230_- | SINE | Alu | Name=AluSz |
| ADediting_776295 | chr19_51861243_- | SINE | Alu | Name=AluSz |
| ADediting_776296 | chr19_51861247_- | SINE | Alu | Name=AluSz |
| ADediting_776297 | chr19_51861250_- | SINE | Alu | Name=AluSz |
| ADediting_776298 | chr19_51861256_- | SINE | Alu | Name=AluSz |
| ADediting_776299 | chr19_51861257_- | SINE | Alu | Name=AluSz |
| ADediting_776300 | chr19_51861263_- | SINE | Alu | Name=AluSz |
| ADediting_776301 | chr19_51861324_- | SINE | Alu | Name=AluSz |
| ADediting_776302 | chr19_51861329_- | SINE | Alu | Name=AluSz |
| ADediting_776303 | chr19_51861334_- | SINE | Alu | Name=AluSz |
| ADediting_776304 | chr19_51861373_- | SINE | Alu | Name=AluSz |
| ADediting_776305 | chr19_51861377_- | SINE | Alu | Name=AluSz |
| ADediting_776306 | chr19_51861380_- | SINE | Alu | Name=AluSz |
| ADediting_776307 | chr19_51861403_- | SINE | Alu | Name=AluSz |
| ADediting_776308 | chr19_51865164_- | SINE | Alu | Name=AluSq2 |
| ADediting_776309 | chr19_51865173_- | SINE | Alu | Name=AluSq2 |
| ADediting_776310 | chr19_51865180_- | SINE | Alu | Name=AluSq2 |
| ADediting_776311 | chr19_51865181_- | SINE | Alu | Name=AluSq2 |
| ADediting_776312 | chr19_51865188_- | SINE | Alu | Name=AluSq2 |
| ADediting_776313 | chr19_51865193_- | SINE | Alu | Name=AluSq2 |
| ADediting_776314 | chr19_51865199_- | SINE | Alu | Name=AluSq2 |
| ADediting_776315 | chr19_51865202_- | SINE | Alu | Name=AluSq2 |
| ADediting_776316 | chr19_51865219_- | SINE | Alu | Name=AluSq2 |
| ADediting_776317 | chr19_51865224_- | SINE | Alu | Name=AluSq2 |
| ADediting_776318 | chr19_51865253_- | SINE | Alu | Name=AluSq2 |
| ADediting_776319 | chr19_51865261_- | SINE | Alu | Name=AluSq2 |
| ADediting_776320 | chr19_51865267_- | SINE | Alu | Name=AluSq2 |
| ADediting_776321 | chr19_51865270_- | SINE | Alu | Name=AluSq2 |
| ADediting_776322 | chr19_51865272_- | SINE | Alu | Name=AluSq2 |
| ADediting_776323 | chr19_51865273_- | SINE | Alu | Name=AluSq2 |
| ADediting_776324 | chr19_51865274_- | SINE | Alu | Name=AluSq2 |
| ADediting_776325 | chr19_51865275_- | SINE | Alu | Name=AluSq2 |
| ADediting_776326 | chr19_51865276_- | SINE | Alu | Name=AluSq2 |
| ADediting_776327 | chr19_51865279_- | SINE | Alu | Name=AluSq2 |
| ADediting_776328 | chr19_51865290_- | SINE | Alu | Name=AluSq2 |
| ADediting_776329 | chr19_51865310_- | SINE | Alu | Name=AluSq2 |
| ADediting_776330 | chr19_51865315_- | SINE | Alu | Name=AluSq2 |
| ADediting_776331 | chr19_51865316_- | SINE | Alu | Name=AluSq2 |
| ADediting_776332 | chr19_51865322_- | SINE | Alu | Name=AluSq2 |
| ADediting_776333 | chr19_51865324_- | SINE | Alu | Name=AluSq2 |
| ADediting_776334 | chr19_51865334_- | SINE | Alu | Name=AluSq2 |
| ADediting_776335 | chr19_51865369_- | SINE | Alu | Name=AluSq2 |
| ADediting_776336 | chr19_51865857_- | SINE | Alu | Name=AluSc |
| ADediting_776337 | chr19_51865860_- | SINE | Alu | Name=AluSc |
| ADediting_776338 | chr19_51865873_- | SINE | Alu | Name=AluSc |
| ADediting_776339 | chr19_51865882_- | SINE | Alu | Name=AluSc |
| ADediting_776340 | chr19_51865912_- | SINE | Alu | Name=AluSc |
| ADediting_776341 | chr19_51865932_- | SINE | Alu | Name=AluSc |
| ADediting_776342 | chr19_51865949_- | SINE | Alu | Name=AluSc |
| ADediting_776343 | chr19_51865952_- | SINE | Alu | Name=AluSc |
| ADediting_776344 | chr19_51865993_- | SINE | Alu | Name=AluSc |
| ADediting_776345 | chr19_51866028_- | SINE | Alu | Name=AluSc |
| ADediting_776346 | chr19_51866029_- | SINE | Alu | Name=AluSc |
| ADediting_776347 | chr19_51866032_- | SINE | Alu | Name=AluSc |
| ADediting_776348 | chr19_51866063_- | SINE | Alu | Name=AluSc |
| ADediting_776349 | chr19_51866349_- | SINE | Alu | Name=AluSz6 |
| ADediting_776350 | chr19_51866719_- | SINE | Alu | Name=AluSx |
| ADediting_776351 | chr19_51866737_- | SINE | Alu | Name=AluSx |
| ADediting_776352 | chr19_51866738_- | SINE | Alu | Name=AluSx |
| ADediting_776353 | chr19_51866747_- | SINE | Alu | Name=AluSx |
| ADediting_776354 | chr19_51866765_- | SINE | Alu | Name=AluSx |
| ADediting_776355 | chr19_51866778_- | SINE | Alu | Name=AluSx |
| ADediting_776356 | chr19_51866779_- | SINE | Alu | Name=AluSx |
| ADediting_776357 | chr19_51866858_- | SINE | Alu | Name=AluSx |
| ADediting_776358 | chr19_51866859_- | SINE | Alu | Name=AluSx |
| ADediting_776359 | chr19_51866869_- | SINE | Alu | Name=AluSx |
| ADediting_776360 | chr19_51866894_- | SINE | Alu | Name=AluSx |
| ADediting_776361 | chr19_51866898_- | SINE | Alu | Name=AluSx |
| ADediting_776362 | chr19_51866918_- | SINE | Alu | Name=AluSx |
| ADediting_776363 | chr19_51866919_- | SINE | Alu | Name=AluSx |
| ADediting_776364 | chr19_51866937_- | SINE | Alu | Name=AluSx |
| ADediting_776365 | chr19_51866943_- | SINE | Alu | Name=AluSx |
| ADediting_776366 | chr19_51867531_- | SINE | Alu | Name=AluSq4 |
| ADediting_776367 | chr19_51867540_- | SINE | Alu | Name=AluSq4 |
| ADediting_776368 | chr19_51867685_- | SINE | Alu | Name=AluSq4 |
| ADediting_776369 | chr19_51867702_- | SINE | Alu | Name=AluSq4 |
| ADediting_776370 | chr19_51871136_- | SINE | Alu | Name=AluJo |
| ADediting_776371 | chr19_51871166_- | SINE | Alu | Name=AluJo |
| ADediting_776372 | chr19_51871180_- | SINE | Alu | Name=AluJo |
| ADediting_776373 | chr19_51871189_- | SINE | Alu | Name=AluJo |
| ADediting_776374 | chr19_51871205_- | SINE | Alu | Name=AluJo |
| ADediting_776375 | chr19_51871210_- | SINE | Alu | Name=AluJo |
| ADediting_776376 | chr19_51871223_- | SINE | Alu | Name=AluJo |
| ADediting_776377 | chr19_51871224_- | SINE | Alu | Name=AluJo |
| ADediting_776378 | chr19_51871228_- | SINE | Alu | Name=AluJo |
| ADediting_776379 | chr19_51871241_- | SINE | Alu | Name=AluJo |
| ADediting_776380 | chr19_51871251_- | SINE | Alu | Name=AluJo |
| ADediting_776381 | chr19_51871253_- | SINE | Alu | Name=AluJo |
| ADediting_776382 | chr19_51871291_- | SINE | Alu | Name=AluJo |
| ADediting_776383 | chr19_51871316_- | SINE | Alu | Name=AluJo |
| ADediting_776384 | chr19_51871359_- | SINE | Alu | Name=AluJo |
| ADediting_776385 | chr19_51871363_- | SINE | Alu | Name=AluJo |
| ADediting_776386 | chr19_51871367_- | SINE | Alu | Name=AluJo |
| ADediting_776387 | chr19_51871368_- | SINE | Alu | Name=AluJo |
| ADediting_776388 | chr19_51871381_- | SINE | Alu | Name=AluJo |
| ADediting_776389 | chr19_51871389_- | SINE | Alu | Name=AluJo |
| ADediting_776390 | chr19_51871390_- | SINE | Alu | Name=AluJo |
| ADediting_776391 | chr19_51871396_- | SINE | Alu | Name=AluJo |
| ADediting_776392 | chr19_51871398_- | SINE | Alu | Name=AluJo |
| ADediting_776393 | chr19_51871406_- | SINE | Alu | Name=AluJo |
| ADediting_776394 | chr19_51871408_- | SINE | Alu | Name=AluJo |
| ADediting_776395 | chr19_51871412_- | SINE | Alu | Name=AluJo |
| ADediting_1557822 | chr19_51861387_- | SINE | Alu | Name=AluSz |
| ADediting_1557823 | chr19_51865228_- | SINE | Alu | Name=AluSq2 |
| ADediting_1557824 | chr19_51865233_- | SINE | Alu | Name=AluSq2 |
| ADediting_1557825 | chr19_51865234_- | SINE | Alu | Name=AluSq2 |
| ADediting_1557826 | chr19_51865264_- | SINE | Alu | Name=AluSq2 |
| ADediting_1557827 | chr19_51865265_- | SINE | Alu | Name=AluSq2 |
| ADediting_1557828 | chr19_51865291_- | SINE | Alu | Name=AluSq2 |
| ADediting_1557829 | chr19_51865298_- | SINE | Alu | Name=AluSq2 |
| ADediting_1557830 | chr19_51865300_- | SINE | Alu | Name=AluSq2 |
| ADediting_1557831 | chr19_51865364_- | SINE | Alu | Name=AluSq2 |
| ADediting_1557832 | chr19_51865370_- | SINE | Alu | Name=AluSq2 |
| ADediting_1557833 | chr19_51865923_- | SINE | Alu | Name=AluSc |
| ADediting_1557834 | chr19_51865935_- | SINE | Alu | Name=AluSc |
| ADediting_1557835 | chr19_51865967_- | SINE | Alu | Name=AluSc |
| ADediting_1557836 | chr19_51866058_- | SINE | Alu | Name=AluSc |
| ADediting_1557837 | chr19_51866729_- | SINE | Alu | Name=AluSx |
| ADediting_1557838 | chr19_51866777_- | SINE | Alu | Name=AluSx |
| ADediting_1557839 | chr19_51866790_- | SINE | Alu | Name=AluSx |
| ADediting_1557840 | chr19_51866799_- | SINE | Alu | Name=AluSx |
| ADediting_1557841 | chr19_51866802_- | SINE | Alu | Name=AluSx |
| ADediting_1557842 | chr19_51866807_- | SINE | Alu | Name=AluSx |
| ADediting_1557843 | chr19_51866816_- | SINE | Alu | Name=AluSx |
| ADediting_1557844 | chr19_51866819_- | SINE | Alu | Name=AluSx |
| ADediting_1557845 | chr19_51866825_- | SINE | Alu | Name=AluSx |
| ADediting_1557846 | chr19_51866834_- | SINE | Alu | Name=AluSx |
| ADediting_1557847 | chr19_51867703_- | SINE | Alu | Name=AluSq4 |
| ADediting_1557848 | chr19_51867722_- | SINE | Alu | Name=AluSq4 |
| ADediting_1557849 | chr19_51870169_- | LINE | L1 | Name=L1MEc |
| ADediting_1557850 | chr19_51871287_- | SINE | Alu | Name=AluJo |
| ADediting_1557851 | chr19_51871289_- | SINE | Alu | Name=AluJo |
| ADediting_1557852 | chr19_51871290_- | SINE | Alu | Name=AluJo |
| ADediting_1557853 | chr19_51871384_- | SINE | Alu | Name=AluJo |
| ADediting_1557854 | chr19_51879068_- | SINE | Alu | Name=AluY |
| ADediting_1631640 | chr19_51836881_- | SINE | Alu | Name=AluSx |
Top |
RNA A-to-I editing events in the alternative splicing sites for ZNF577 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF577 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
 | |
 | |
 | |
 | |
 | |
 | |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for ZNF577 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for ZNF577 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1557853 | chr19_51871384_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-371a-3p | chr19 | 51871379 | 51871385 | 7mer-m8 | 51871378 | 51871400 | 145 | -17.05 |
| ADediting_776383 | chr19_51871316_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-4716-5p | chr19 | 51871315 | 51871321 | 7mer-m8 | 51871314 | 51871335 | 148 | -13.48 |
| ADediting_776384 | chr19_51871359_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-1976 | chr19 | 51871359 | 51871365 | 7mer-m8 | 51871358 | 51871379 | 152 | -25.54 |
| ADediting_776384 | chr19_51871359_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-660-3p | chr19 | 51871357 | 51871364 | 8mer-1a | 51871357 | 51871377 | 143 | -18.16 |
| ADediting_776386 | chr19_51871367_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-18a-3p | chr19 | 51871362 | 51871368 | 7mer-m8 | 51871361 | 51871381 | 147 | -21.43 |
| ADediting_776386 | chr19_51871367_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-3176 | chr19 | 51871367 | 51871373 | 7mer-m8 | 51871366 | 51871384 | 140 | -15.24 |
| ADediting_776386 | chr19_51871367_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-3922-3p | chr19 | 51871367 | 51871373 | 7mer-m8 | 51871366 | 51871387 | 141 | -16.66 |
| ADediting_776386 | chr19_51871367_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-874-3p | chr19 | 51871363 | 51871369 | 7mer-m8 | 51871362 | 51871385 | 156 | -31.64 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-518a-3p | chr19 | 51871377 | 51871383 | 7mer-m8 | 51871376 | 51871397 | 145 | -17.16 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-518b | chr19 | 51871377 | 51871383 | 7mer-m8 | 51871376 | 51871396 | 146 | -21.8 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-518c-3p | chr19 | 51871377 | 51871383 | 7mer-m8 | 51871376 | 51871398 | 146 | -21.31 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-518d-3p | chr19 | 51871377 | 51871383 | 7mer-m8 | 51871376 | 51871396 | 145 | -17.84 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-518e-3p | chr19 | 51871378 | 51871384 | 7mer-m8 | 51871377 | 51871398 | 144 | -19.12 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-518f-3p | chr19 | 51871377 | 51871383 | 7mer-m8 | 51871376 | 51871396 | 145 | -17.49 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-526a-3p | chr19 | 51871377 | 51871383 | 7mer-m8 | 51871376 | 51871396 | 146 | -17.72 |
| ADediting_776389 | chr19_51871389_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-3672 | chr19 | 51871384 | 51871390 | 7mer-m8 | 51871383 | 51871408 | 150 | -13.48 |
| ADediting_776389 | chr19_51871389_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-6864-3p | chr19 | 51871384 | 51871390 | 7mer-m8 | 51871383 | 51871403 | 142 | -10.4 |
| ADediting_776390 | chr19_51871390_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-513a-5p | chr19 | 51871389 | 51871395 | 7mer-m8 | 51871388 | 51871405 | 144 | -17.77 |
| ADediting_776394 | chr19_51871408_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-6720-3p | chr19 | 51871406 | 51871413 | 8mer-1a | 51871406 | 51871427 | 151 | -22.76 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1557853 | chr19_51871384_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-512-3p | chr19 | 51871379 | 51871385 | 7mer-m8 | 51871378 | 51871402 | 151 | -18.66 |
| ADediting_1557853 | chr19_51871384_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-7160-5p | chr19 | 51871381 | 51871387 | 7mer-1a | 51871381 | 51871401 | 144 | -25.98 |
| ADediting_776384 | chr19_51871359_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-141-5p | chr19 | 51871356 | 51871362 | 7mer-m8 | 51871355 | 51871376 | 143 | -13.74 |
| ADediting_776384 | chr19_51871359_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-3074-5p | chr19 | 51871359 | 51871365 | 7mer-m8 | 51871358 | 51871378 | 141 | -17.55 |
| ADediting_776385 | chr19_51871363_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-3074-5p | chr19 | 51871359 | 51871365 | 7mer-m8 | 51871358 | 51871378 | 141 | -17.55 |
| ADediting_776385 | chr19_51871363_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-6747-3p | chr19 | 51871360 | 51871367 | 8mer-1a | 51871360 | 51871381 | 154 | -24.54 |
| ADediting_776387 | chr19_51871368_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-6878-3p | chr19 | 51871367 | 51871374 | 8mer-1a | 51871367 | 51871387 | 142 | -13.53 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-302a-3p | chr19 | 51871378 | 51871384 | 7mer-m8 | 51871377 | 51871398 | 147 | -15.45 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-302b-3p | chr19 | 51871378 | 51871384 | 7mer-m8 | 51871377 | 51871397 | 145 | -9.54 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-302c-3p | chr19 | 51871378 | 51871384 | 7mer-m8 | 51871377 | 51871397 | 149 | -11.96 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-302d-3p | chr19 | 51871378 | 51871384 | 7mer-m8 | 51871377 | 51871404 | 152 | -14.53 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-302e | chr19 | 51871378 | 51871384 | 7mer-m8 | 51871377 | 51871393 | 141 | -8.62 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-512-3p | chr19 | 51871379 | 51871385 | 7mer-m8 | 51871378 | 51871402 | 151 | -18.66 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-519d-3p | chr19 | 51871377 | 51871383 | 7mer-m8 | 51871376 | 51871396 | 146 | -14.54 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-520a-3p | chr19 | 51871378 | 51871384 | 7mer-m8 | 51871377 | 51871398 | 140 | -11.04 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-520b-3p | chr19 | 51871378 | 51871384 | 7mer-m8 | 51871377 | 51871396 | 141 | -16.53 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-520c-3p | chr19 | 51871378 | 51871384 | 7mer-m8 | 51871377 | 51871397 | 146 | -16.53 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-520d-3p | chr19 | 51871378 | 51871384 | 7mer-m8 | 51871377 | 51871400 | 142 | -15.59 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-520e-3p | chr19 | 51871378 | 51871384 | 7mer-m8 | 51871377 | 51871397 | 140 | -13.33 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-520g-3p | chr19 | 51871376 | 51871382 | 7mer-m8 | 51871375 | 51871398 | 151 | -19.1 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-520h | chr19 | 51871376 | 51871382 | 7mer-m8 | 51871375 | 51871396 | 150 | -15.08 |
| ADediting_776388 | chr19_51871381_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-526b-3p | chr19 | 51871377 | 51871383 | 7mer-m8 | 51871376 | 51871396 | 146 | -16.21 |
| ADediting_776389 | chr19_51871389_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-10399-5p | chr19 | 51871388 | 51871394 | 7mer-m8 | 51871387 | 51871408 | 148 | -10 |
| ADediting_776389 | chr19_51871389_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-6504-3p | chr19 | 51871388 | 51871394 | 7mer-m8 | 51871387 | 51871408 | 149 | -15.11 |
| ADediting_776390 | chr19_51871390_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-10399-5p | chr19 | 51871388 | 51871394 | 7mer-m8 | 51871387 | 51871408 | 148 | -10 |
| ADediting_776390 | chr19_51871390_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-6504-3p | chr19 | 51871388 | 51871394 | 7mer-m8 | 51871387 | 51871408 | 149 | -15.11 |
| ADediting_776391 | chr19_51871396_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-552-3p | chr19 | 51871390 | 51871397 | 8mer-1a | 51871390 | 51871410 | 140 | -14.1 |
| ADediting_776392 | chr19_51871398_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-6807-5p | chr19 | 51871398 | 51871404 | 7mer-m8 | 51871397 | 51871419 | 152 | -28.96 |
| ADediting_776393 | chr19_51871406_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-4252 | chr19 | 51871401 | 51871407 | 7mer-m8 | 51871400 | 51871418 | 150 | -18.77 |
| ADediting_776393 | chr19_51871406_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-550b-2-5p | chr19 | 51871406 | 51871412 | 7mer-m8 | 51871405 | 51871431 | 152 | -18 |
| ADediting_776393 | chr19_51871406_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-6529-3p | chr19 | 51871405 | 51871411 | 7mer-m8 | 51871404 | 51871425 | 145 | -15.07 |
| ADediting_776393 | chr19_51871406_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-6889-3p | chr19 | 51871405 | 51871411 | 7mer-m8 | 51871404 | 51871423 | 140 | -16.45 |
| ADediting_776394 | chr19_51871408_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-1271-3p | chr19 | 51871406 | 51871413 | 8mer-1a | 51871406 | 51871428 | 150 | -23.21 |
| ADediting_776394 | chr19_51871408_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-550a-3-5p | chr19 | 51871406 | 51871413 | 8mer-1a | 51871406 | 51871430 | 147 | -16.01 |
| ADediting_776394 | chr19_51871408_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-550a-5p | chr19 | 51871406 | 51871413 | 8mer-1a | 51871406 | 51871433 | 147 | -18.28 |
| ADediting_776394 | chr19_51871408_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-550b-2-5p | chr19 | 51871406 | 51871412 | 7mer-m8 | 51871405 | 51871431 | 152 | -18 |
| ADediting_776394 | chr19_51871408_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-6529-3p | chr19 | 51871405 | 51871411 | 7mer-m8 | 51871404 | 51871425 | 145 | -15.07 |
| ADediting_776394 | chr19_51871408_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-6889-3p | chr19 | 51871405 | 51871411 | 7mer-m8 | 51871404 | 51871423 | 140 | -16.45 |
| ADediting_776395 | chr19_51871412_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-1271-3p | chr19 | 51871406 | 51871413 | 8mer-1a | 51871406 | 51871428 | 150 | -23.21 |
| ADediting_776395 | chr19_51871412_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-4435 | chr19 | 51871412 | 51871418 | 7mer-m8 | 51871411 | 51871434 | 141 | -15.24 |
| ADediting_776395 | chr19_51871412_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-550a-3-5p | chr19 | 51871406 | 51871413 | 8mer-1a | 51871406 | 51871430 | 147 | -16.01 |
| ADediting_776395 | chr19_51871412_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-550a-5p | chr19 | 51871406 | 51871413 | 8mer-1a | 51871406 | 51871433 | 147 | -18.28 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-337-3p | chr19 | 51872294 | 51872301 | 8mer-1a | 51872294 | 51872315 | 158 | -13.17 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000161551.14 | ENST00000639636.1 | ZNF577-214 | hsa-miR-337-3p | chr19 | 51872294 | 51872301 | 8mer-1a | 51872294 | 51872315 | 158 | -13.17 |
| ADediting_286380 | chr11_79422188_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-5579-3p | chr19 | 51871654 | 51871660 | 7mer-m8 | 51871653 | 51871674 | 140 | -12.92 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-4775 | chr19 | 51871534 | 51871540 | 7mer-m8 | 51871533 | 51871555 | 152 | -9.07 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-4775 | chr19 | 51871929 | 51871935 | 7mer-m8 | 51871928 | 51871953 | 158 | -12.41 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000161551.14 | ENST00000301399.11 | ZNF577-201 | hsa-miR-589-3p | chr19 | 51871713 | 51871719 | 7mer-m8 | 51871712 | 51871735 | 142 | -13.66 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for ZNF577 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000301399.11 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1557850 | ENST00000301399.11 | chr19_51871287_- | 3069 | -865.40 | -865.40 | -883.30 |
| ADediting_1557851 | ENST00000301399.11 | chr19_51871289_- | 3067 | -865.40 | -865.40 | -883.30 |
| ADediting_1557852 | ENST00000301399.11 | chr19_51871290_- | 3066 | -865.40 | -865.40 | -883.30 |
| ADediting_776382 | ENST00000301399.11 | chr19_51871291_- | 3065 | -865.40 | -865.40 | -883.30 |
| ADediting_776383 | ENST00000301399.11 | chr19_51871316_- | 3040 | -865.40 | -865.40 | -883.30 |
| ADediting_776384 | ENST00000301399.11 | chr19_51871359_- | 2997 | -865.80 | -865.40 | -883.30 |
| ADediting_776385 | ENST00000301399.11 | chr19_51871363_- | 2993 | -865.40 | -865.40 | -883.30 |
| ADediting_776386 | ENST00000301399.11 | chr19_51871367_- | 2989 | -865.40 | -865.40 | -883.30 |
| ADediting_776387 | ENST00000301399.11 | chr19_51871368_- | 2988 | -865.10 | -865.40 | -883.30 |
| ADediting_776388 | ENST00000301399.11 | chr19_51871381_- | 2975 | -864.90 | -865.40 | -883.30 |
| ADediting_1557853 | ENST00000301399.11 | chr19_51871384_- | 2972 | -867.60 | -865.40 | -883.30 |
| ADediting_776389 | ENST00000301399.11 | chr19_51871389_- | 2967 | -867.70 | -865.40 | -883.30 |
| ADediting_776390 | ENST00000301399.11 | chr19_51871390_- | 2966 | -865.50 | -865.40 | -883.30 |
| ADediting_776391 | ENST00000301399.11 | chr19_51871396_- | 2960 | -865.00 | -865.40 | -883.30 |
| ADediting_776392 | ENST00000301399.11 | chr19_51871398_- | 2958 | -865.00 | -865.40 | -883.30 |
| ADediting_776393 | ENST00000301399.11 | chr19_51871406_- | 2950 | -866.80 | -865.40 | -883.30 |
| ADediting_776394 | ENST00000301399.11 | chr19_51871408_- | 2948 | -867.30 | -865.40 | -883.30 |
| ADediting_776395 | ENST00000301399.11 | chr19_51871412_- | 2944 | -865.70 | -865.40 | -883.30 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for ZNF577 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1557824 | chr19_51865233_- | 0.000765774410838525 | 0.271823243138444 | 1.63352701829125e-05 | 0.343977499941411 | 0.729626805343426 | 0.0284522198947403 |
| CER | ADediting_1557843 | chr19_51866816_- | 1.89724811242108e-05 | 0.341488248602296 | 6.08669628378609e-06 | 0.359889078622998 | 0.281381137772651 | 0.0885225343729864 |
| CER | ADediting_1557844 | chr19_51866819_- | 5.07261120768229e-05 | 0.324577302870775 | 1.10208624069496e-05 | 0.35042372068965 | 0.360839814565786 | 0.0751316749749816 |
| CER | ADediting_1557845 | chr19_51866825_- | 5.38274387130682e-05 | 0.323524387088868 | 4.12457940745806e-06 | 0.365933363740159 | 0.033730355942023 | 0.173499486417047 |
| CER | ADediting_776301 | chr19_51861324_- | 0.0017376970268793 | 0.253633141844135 | 2.08400590026432e-05 | 0.339915765171496 | 0.150354783933408 | -0.118011473228916 |
| CER | ADediting_776302 | chr19_51861329_- | 0.00696576409378009 | 0.21947267756995 | 2.58491072478119e-05 | 0.336275690470559 | 0.481794879468868 | 0.0578698438315319 |
| CER | ADediting_776304 | chr19_51861373_- | 0.0283804014679147 | 0.179024186320812 | 0.000146577020498813 | 0.30513340642193 | 0.064761337965479 | 0.151195620014278 |
| CER | ADediting_776305 | chr19_51861377_- | 3.33054705927582e-05 | 0.331933300333371 | 7.77598510658198e-10 | 0.475535466951055 | 0.0357596471909092 | 0.171597455563688 |
| CER | ADediting_776306 | chr19_51861380_- | 0.00229963055213381 | 0.247106795777979 | 2.5428899672388e-06 | 0.373279151355824 | 0.0616835185358801 | 0.152948156347503 |
| CER | ADediting_776310 | chr19_51865180_- | 7.90948497641875e-05 | 0.316599659758336 | 0.000486790199421657 | 0.28136575416068 | 0.705211653343562 | -0.0311406485649353 |
| CER | ADediting_776312 | chr19_51865188_- | 5.86186441352086e-05 | 0.322004622377577 | 0.000152484771605928 | 0.304382738002113 | 0.97883284468775 | -0.0021846185173432 |
| CER | ADediting_776314 | chr19_51865199_- | 1.67801515121402e-05 | 0.34353214502847 | 7.20351854628475e-05 | 0.318297423149641 | 0.238083219945675 | 0.0969133496216773 |
| CER | ADediting_776319 | chr19_51865261_- | 2.45608513726402e-06 | 0.373799798531105 | 4.49237312755181e-05 | 0.326720624198152 | 0.576302735197795 | 0.0459858341323458 |
| CER | ADediting_776322 | chr19_51865272_- | 0.00115316081920394 | 0.262894551726226 | 2.08761509145053e-05 | 0.339886704351716 | 0.183007567016619 | 0.109309075850581 |
| CER | ADediting_776323 | chr19_51865273_- | 0.000138612185911256 | 0.306191389687783 | 3.98996346384369e-05 | 0.328797868441598 | 0.116007603620373 | 0.128875513115355 |
| CER | ADediting_776324 | chr19_51865274_- | 0.00183095548659479 | 0.252428085772928 | 0.000148105450308425 | 0.304936529775701 | 0.23796963784752 | 0.0969366958989255 |
| CER | ADediting_776325 | chr19_51865275_- | 0.00044402952520136 | 0.283261476623298 | 7.70683135235031e-05 | 0.317072013204421 | 0.174156994366249 | 0.111545732267356 |
| CER | ADediting_776326 | chr19_51865276_- | 0.000105099178490687 | 0.311374267585731 | 3.7972519295509e-06 | 0.367202041369432 | 0.193670152905575 | 0.106717477014301 |
| CER | ADediting_776330 | chr19_51865315_- | 7.35977874384348e-05 | 0.317908618548712 | 0.000101309862513998 | 0.312054762015806 | 0.487661294942688 | 0.0570989888652158 |
| CER | ADediting_776336 | chr19_51865857_- | 0.00038474971041789 | 0.28618979558421 | 5.10364478463092e-05 | 0.324469262675383 | 0.163400988996728 | 0.114380090910875 |
| CER | ADediting_776337 | chr19_51865860_- | 6.46673034759849e-06 | 0.358937210828037 | 1.02843346895692e-07 | 0.417949785444227 | 0.149541213274374 | 0.118245667101108 |
| DLPFC | ADediting_776339 | chr19_51865882_- | 0.0178833504928326 | 0.134426809216612 | 0.55556041750858 | -0.0336047256765459 | 2.40377940928323e-15 | 0.429488752686932 |
| CER | ADediting_776339 | chr19_51865882_- | 5.97185023390332e-13 | 0.544416707863009 | 1.13178011119551e-14 | 0.576720194941263 | 0.0868687668029304 | 0.140277967755694 |
| CER | ADediting_776342 | chr19_51865949_- | 7.1632526946269e-06 | 0.357322553062354 | 1.30104994116523e-05 | 0.347722396972654 | 0.774787909157457 | 0.023555227809527 |
| CER | ADediting_776343 | chr19_51865952_- | 1.29674275356984e-05 | 0.347776613741449 | 1.28877022242187e-05 | 0.34787741829221 | 0.94976309019903 | -0.00518764110851886 |
| CER | ADediting_776344 | chr19_51865993_- | 0.000130729347110276 | 0.30729583517633 | 4.76934216228248e-06 | 0.363691701781709 | 0.792325523510396 | 0.0216765097362131 |
| CER | ADediting_776345 | chr19_51866028_- | 1.8014786908888e-05 | 0.342352153521835 | 2.17944469933639e-05 | 0.339162792992742 | 0.191097925324636 | -0.10733295376001 |
| CER | ADediting_776346 | chr19_51866029_- | 0.000152732892976316 | 0.304351806989263 | 2.43287282919595e-06 | 0.373941986560252 | 0.553391148357605 | -0.0487718158444701 |
| CER | ADediting_776348 | chr19_51866063_- | 0.00198077179762034 | 0.250604349822772 | 2.93661947659183e-05 | 0.334098159664956 | 0.454272490592516 | -0.0615563243407457 |
| DLPFC | ADediting_776353 | chr19_51866747_- | 0.00173750461946739 | 0.177179515362504 | 0.547952206809893 | 0.0342532967500788 | 2.0744804615162e-09 | 0.331957638265422 |
| CER | ADediting_776353 | chr19_51866747_- | 5.12108116863943e-09 | 0.454561341304544 | 2.1200302406045e-08 | 0.437760989931647 | 0.848503743734333 | -0.0157279688927113 |
| CER | ADediting_776355 | chr19_51866778_- | 0.00019148060614602 | 0.300016615968893 | 5.958993929467e-05 | 0.321710785978799 | 0.147683927397727 | -0.11878393334724 |
| CER | ADediting_776356 | chr19_51866779_- | 2.91073682638433e-05 | 0.33424980342136 | 6.24985188721772e-05 | 0.320856985553198 | 0.652591869291458 | -0.0370531130436422 |
| CER | ADediting_776357 | chr19_51866858_- | 7.92583790184494e-05 | 0.31656203908359 | 0.00072279639563788 | 0.273059010779221 | 0.403054543907854 | -0.0687680857577559 |
| CER | ADediting_776358 | chr19_51866859_- | 1.00987846669047e-05 | 0.351835958010708 | 8.02046363383153e-06 | 0.355528096606399 | 0.909132376874132 | -0.00939732645879974 |
| CER | ADediting_776359 | chr19_51866869_- | 8.18009204537864e-05 | 0.31598627239446 | 0.0020742355102739 | 0.249529115748851 | 0.789278140186661 | -0.0220021325367536 |
| CER | ADediting_776362 | chr19_51866918_- | 4.35487052899782e-06 | 0.365096807771273 | 0.00101021064060072 | 0.265814512270731 | 0.726910636669913 | 0.0287497728279291 |
| CER | ADediting_776364 | chr19_51866937_- | 3.90295130178453e-08 | 0.430254404810491 | 3.27025653060261e-05 | 0.33224848670953 | 0.63725105635857 | -0.0388117149442279 |
| DLPFC | ADediting_776367 | chr19_51867540_- | 0.0884880805885678 | 0.0969118363483287 | 0.391988070605214 | -0.0487866587795291 | 4.94690898359425e-08 | 0.303606657968039 |
| CER | ADediting_776371 | chr19_51871166_- | 4.49754389680783e-06 | 0.36459933573016 | 2.93686876725738e-05 | 0.33409670521983 | 0.795683038512906 | 0.0213181364422134 |
| CER | ADediting_776374 | chr19_51871205_- | 2.93036151857972e-06 | 0.371143750696961 | 3.92038076332695e-07 | 0.400103872110611 | 0.107860249900461 | 0.131812494622262 |
| CER | ADediting_776375 | chr19_51871210_- | 8.37246271081592e-06 | 0.354843344567432 | 6.21090435742353e-07 | 0.393719123257373 | 0.119262042732342 | 0.127747176820777 |
| CER | ADediting_776376 | chr19_51871223_- | 2.31738481984781e-08 | 0.436677468329838 | 7.56913785658107e-09 | 0.450030743673209 | 0.00265280516833408 | 0.243713068717584 |
| CER | ADediting_776377 | chr19_51871224_- | 1.025114928163e-06 | 0.386610116547337 | 5.52164190969229e-08 | 0.425904470360051 | 0.0193938311267166 | 0.190726338447098 |
| CER | ADediting_776379 | chr19_51871241_- | 5.34426220978655e-06 | 0.361923247345585 | 1.37778138159024e-10 | 0.493619211165085 | 0.29203131342624 | 0.0865949616290727 |
| CER | ADediting_776380 | chr19_51871251_- | 2.93596352083543e-05 | 0.334101987285248 | 1.61633317497478e-08 | 0.44104003749093 | 0.943428395585221 | 0.00584281088617165 |
| CER | ADediting_776381 | chr19_51871253_- | 0.00210531195731925 | 0.249181338062996 | 5.17616308480557e-07 | 0.396263990685342 | 0.857366541784997 | 0.0147976709703912 |
| CER | ADediting_776383 | chr19_51871316_- | 0.000710252564815979 | 0.273432434243733 | 5.24912228814981e-05 | 0.323970873537902 | 0.579564840674257 | 0.04559345743602 |
| DLPFC | ADediting_776385 | chr19_51871363_- | 0.562007700594584 | -0.0330584921061329 | 0.014425436817831 | -0.13883863223724 | 2.30231219519579e-11 | 0.367801220372901 |
| CER | ADediting_776387 | chr19_51871368_- | 0.000611983463305009 | 0.276587769602306 | 8.11133212229237e-06 | 0.355348645682956 | 0.679582099915332 | 0.0339987025302594 |
| CER | ADediting_776390 | chr19_51871390_- | 0.0424813445891201 | 0.165886874772495 | 0.000173837831288151 | 0.301878345886625 | 0.597869875854427 | 0.0434102719974075 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 7.38217058008171e-05 | 0.223174343466965 | 1.40121123344408e-09 | 0.335269802362533 | 0.00858557922584631 | 0.149035273483016 |
| AC | 2.2629064801845e-37 | 0.694834949102068 | 2.70752936031001e-23 | 0.573835342915031 | 2.08212493844685e-32 | 0.658103582948226 |
| PCC | 2.12188130352078e-07 | 0.364791285984634 | 1.94715598239955e-05 | 0.303692192185065 | 6.5556576852541e-10 | 0.428027371231346 |
| CER | 2.82804416307625e-05 | 0.334742938645778 | 0.00105514115427874 | 0.264858032622111 | 0.13713124279256 | 0.12194372295103 |
| TCX | 0.297607431613607 | 0.085604374267056 | 0.00139005170034655 | -0.258715886922855 | 1.42835750906642e-14 | 0.574918371745949 |
| FP | 2.39825367890548e-18 | 0.593855768091258 | 2.96507495535477e-10 | 0.449920220240822 | 2.31945706193457e-10 | 0.452332683674918 |
| IFG | 0.0193065196373399 | 0.464549470336229 | 0.144168985698115 | 0.300672990222655 | 2.14484849971203e-05 | 0.742410667843669 |
| PG | 2.14757654041874e-34 | 0.746556232376603 | 2.26635476988587e-16 | 0.554267246299364 | 0.0800940676851554 | 0.12865997913945 |
| STG | 4.8345916327953e-07 | 0.516803386864502 | 0.0030876750009985 | 0.319134199849382 | 6.09757093697281e-10 | 0.612214397523855 |
Top |
Relation with AD stages for ZNF577 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_776337 | chr19_51865860_- | 0.00132848551759528 | 0.305013349625975 |
| CER | ADediting_1557843 | chr19_51866816_- | 0.000888281802852402 | 0.3152945758099 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
Top |
RelatedDrugs for ZNF577 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for ZNF577 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
|