ADeditome: functional annotation of RNA A-to-I editing in AD

Gene summary for ZNF397

Gene summary

Gene information	Gene symbol	ZNF397
	Gene ID	84307
	Gene name	zinc finger protein 397
	Synonyms	ZNF47\|ZSCAN15
	Cytomap	18q12.2
	Type of gene	protein-coding
	Description	zinc finger protein 397zinc finger and SCAN domain-containing protein 15zinc finger protein 47
	Modification date	20200313
	UniProtAcc	Q8NF99,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ZNF397

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_687071(35245645, +), ADediting_687072(35245690, +), ADediting_687073(35245777, +), ADediting_687074(35245820, +), ADediting_687075(35245868, +), ADediting_687076(35245869, +), ADediting_687077(35245890, +), ADediting_687078(35245895, +), ADediting_687079(35245903, +), ADediting_687080(35245908, +), ADediting_687081(35245917, +), ADediting_687082(35245924, +), ADediting_687083(35245928, +), ADediting_687084(35245938, +), ADediting_687085(35245945, +), ADediting_687086(35245979, +), ADediting_687087(35245987, +), ADediting_687088(35245988, +), ADediting_687089(35246001, +), ADediting_687090(35246036, +), ADediting_687091(35246047, +), ADediting_687092(35246063, +), ADediting_687093(35246071, +), ADediting_687094(35246104, +), ADediting_687095(35246110, +), ADediting_687096(35246113, +), ADediting_687097(35246131, +), ADediting_687098(35246147, +), ADediting_687099(35246170, +), ADediting_687108(35247714, +), ADediting_687109(35247727, +), ADediting_687110(35247732, +), ADediting_687111(35247735, +), ADediting_687112(35247745, +), ADediting_687113(35247750, +), ADediting_687114(35247751, +), ADediting_687115(35247752, +), ADediting_687116(35247770, +), ADediting_687117(35247771, +), ADediting_687118(35247788, +), ADediting_687119(35247800, +), ADediting_687120(35247810, +), ADediting_687121(35247812, +), ADediting_687122(35247820, +), ADediting_687123(35247823, +), ADediting_687124(35247844, +), ADediting_687125(35247850, +), ADediting_687126(35247853, +), ADediting_687127(35247854, +), ADediting_687128(35247855, +), ADediting_687129(35247859, +), ADediting_687130(35247870, +), ADediting_687131(35247879, +), ADediting_687132(35247892, +), ADediting_687133(35247904, +), ADediting_687134(35247909, +), ADediting_687135(35247930, +), ADediting_687136(35247931, +), ADediting_687137(35247932, +), ADediting_687138(35247944, +), ADediting_687139(35248577, +), ADediting_687140(35248579, +), ADediting_687141(35248583, +), ADediting_687142(35248591, +), ADediting_687143(35248594, +), ADediting_687144(35248602, +), ADediting_687145(35248607, +), ADediting_687146(35248626, +), ADediting_687147(35248639, +), ADediting_687148(35248640, +), ADediting_687149(35248645, +), ADediting_687150(35248659, +), ADediting_687151(35248670, +), ADediting_687152(35248682, +), ADediting_687153(35248692, +), ADediting_687154(35248699, +), ADediting_687155(35248708, +), ADediting_687156(35248721, +), ADediting_687157(35248727, +), ADediting_687158(35248728, +), ADediting_687159(35248738, +), ADediting_687160(35248744, +), ADediting_687161(35248749, +), ADediting_687162(35248751, +), ADediting_687163(35248762, +), ADediting_687164(35248771, +), ADediting_687165(35248783, +), ADediting_687166(35248787, +), ADediting_687167(35248792, +), ADediting_687168(35248797, +), ADediting_687169(35248799, +), ADediting_687170(35248852, +), ADediting_687171(35249374, +), ADediting_687172(35249378, +), ADediting_687173(35249396, +), ADediting_687174(35249397, +), ADediting_687175(35249402, +), ADediting_687176(35249413, +), ADediting_687177(35249432, +), ADediting_687178(35249437, +), ADediting_687179(35249442, +), ADediting_687180(35249456, +), ADediting_687181(35249465, +), ADediting_687182(35249474, +), ADediting_687183(35249476, +), ADediting_687184(35249507, +), ADediting_687185(35249522, +), ADediting_687186(35249532, +), ADediting_687187(35249538, +), ADediting_687188(35249542, +), ADediting_687189(35249557, +), ADediting_687190(35249559, +), ADediting_687191(35249565, +), ADediting_687192(35249573, +), ADediting_687193(35249574, +), ADediting_687194(35249594, +), ADediting_687195(35249598, +), ADediting_687196(35249603, +), ADediting_687197(35249605, +), ADediting_687198(35249610, +), ADediting_1550640(35245805, +), ADediting_1550641(35245813, +), ADediting_1550642(35245814, +), ADediting_1550643(35245819, +), ADediting_1550644(35245889, +), ADediting_1550645(35245904, +), ADediting_1550646(35245936, +), ADediting_1550647(35245952, +), ADediting_1550648(35245965, +), ADediting_1550649(35246019, +), ADediting_1550650(35246041, +), ADediting_1550651(35246067, +), ADediting_1550652(35247946, +), ADediting_1550653(35248631, +), ADediting_1550654(35249581, +), ADediting_1629612(35245861, +), ADediting_1629613(35248558, +), ADediting_1629614(35248689, +),

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RNA editing positional annotations for ZNF397 using Annovar

Protein coding RNA editing(s).

ADeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
ADediting_1550640	chr18_35245805_+	nonsynonymous SNV	ENST00000330501.12	c.A1100G	p.K367R	0.117	0.805	-1.78
ADediting_1550641	chr18_35245813_+	nonsynonymous SNV	ENST00000330501.12	c.A1108G	p.K370E	0.557	0.025	-0.49
ADediting_1550642	chr18_35245814_+	nonsynonymous SNV	ENST00000330501.12	c.A1109G	p.K370R	0.379	0.524	-1.17
ADediting_1550643	chr18_35245819_+	nonsynonymous SNV	ENST00000330501.12	c.A1114G	p.N372D	0.149	0.049	-1.81
ADediting_1550644	chr18_35245889_+	nonsynonymous SNV	ENST00000330501.12	c.A1184G	p.K395R	0.45	0.805	-1.74
ADediting_1550645	chr18_35245904_+	nonsynonymous SNV	ENST00000330501.12	c.A1199G	p.N400S	0.256	0.057	-1.65
ADediting_1550646	chr18_35245936_+	nonsynonymous SNV	ENST00000330501.12	c.A1231G	p.K411E	1.0	0.439	0.68
ADediting_1550647	chr18_35245952_+	nonsynonymous SNV	ENST00000330501.12	c.A1247G	p.Q416R	0.048	0.67	-1.85
ADediting_1550648	chr18_35245965_+	synonymous SNV	ENST00000330501.12	c.A1260G	p.T420T	.	.	.
ADediting_1550649	chr18_35246019_+	synonymous SNV	ENST00000330501.12	c.A1314G	p.S438S	.	.	.
ADediting_1550650	chr18_35246041_+	nonsynonymous SNV	ENST00000330501.12	c.A1336G	p.I446V	0.219	0.678	-0.42
ADediting_1550651	chr18_35246067_+	synonymous SNV	ENST00000330501.12	c.A1362G	p.E454E	.	.	.
ADediting_1629612	chr18_35245861_+	nonsynonymous SNV	ENST00000330501.12	c.A1156G	p.I386V	0.326	0.089	0.04
ADediting_687071	chr18_35245645_+	nonsynonymous SNV	ENST00000330501.12	c.A940G	p.K314E	0.222	0.054	0.18
ADediting_687072	chr18_35245690_+	nonsynonymous SNV	ENST00000330501.12	c.A985G	p.I329V	0.173	0.262	-0.76
ADediting_687073	chr18_35245777_+	nonsynonymous SNV	ENST00000330501.12	c.A1072G	p.R358G	0.101	0.076	-3.72
ADediting_687074	chr18_35245820_+	nonsynonymous SNV	ENST00000330501.12	c.A1115G	p.N372S	0.106	0.158	-1.56
ADediting_687075	chr18_35245868_+	nonsynonymous SNV	ENST00000330501.12	c.A1163G	p.Q388R	0.158	0.975	-2.52
ADediting_687076	chr18_35245869_+	synonymous SNV	ENST00000330501.12	c.A1164G	p.Q388Q	.	.	.
ADediting_687077	chr18_35245890_+	synonymous SNV	ENST00000330501.12	c.A1185G	p.K395K	.	.	.
ADediting_687078	chr18_35245895_+	nonsynonymous SNV	ENST00000330501.12	c.A1190G	p.Y397C	0.0	0.999	-8.1
ADediting_687079	chr18_35245903_+	nonsynonymous SNV	ENST00000330501.12	c.A1198G	p.N400D	0.229	0.062	-1.91
ADediting_687080	chr18_35245908_+	synonymous SNV	ENST00000330501.12	c.A1203G	p.E401E	.	.	.
ADediting_687081	chr18_35245917_+	synonymous SNV	ENST00000330501.12	c.A1212G	p.K404K	.	.	.
ADediting_687082	chr18_35245924_+	nonsynonymous SNV	ENST00000330501.12	c.A1219G	p.S407G	0.006	0.092	-2.73
ADediting_687083	chr18_35245928_+	nonsynonymous SNV	ENST00000330501.12	c.A1223G	p.Q408R	1.0	0.367	-0.24
ADediting_687084	chr18_35245938_+	synonymous SNV	ENST00000330501.12	c.A1233G	p.K411K	.	.	.
ADediting_687085	chr18_35245945_+	nonsynonymous SNV	ENST00000330501.12	c.A1240G	p.R414G	0.301	0.753	-3.01
ADediting_687086	chr18_35245979_+	nonsynonymous SNV	ENST00000330501.12	c.A1274G	p.Y425C	0.0	1.0	-7.89
ADediting_687087	chr18_35245987_+	nonsynonymous SNV	ENST00000330501.12	c.A1282G	p.N428D	0.552	0.549	-1.16
ADediting_687088	chr18_35245988_+	nonsynonymous SNV	ENST00000330501.12	c.A1283G	p.N428S	0.35	0.45	-1.5
ADediting_687089	chr18_35246001_+	synonymous SNV	ENST00000330501.12	c.A1296G	p.K432K	.	.	.
ADediting_687090	chr18_35246036_+	nonsynonymous SNV	ENST00000330501.12	c.A1331G	p.Q444R	0.041	0.944	-2.35
ADediting_687091	chr18_35246047_+	nonsynonymous SNV	ENST00000330501.12	c.A1342G	p.S448G	0.032	0.796	-2.66
ADediting_687092	chr18_35246063_+	nonsynonymous SNV	ENST00000330501.12	c.A1358G	p.Y453C	0.001	0.952	-7.76
ADediting_687093	chr18_35246071_+	nonsynonymous SNV	ENST00000330501.12	c.A1366G	p.S456G	0.08	0.01	-1.37
ADediting_687094	chr18_35246104_+	nonsynonymous SNV	ENST00000330501.12	c.A1399G	p.N467D	0.113	0.064	-1.14
ADediting_687095	chr18_35246110_+	nonsynonymous SNV	ENST00000330501.12	c.A1405G	p.I469V	0.16	0.345	-0.27
ADediting_687096	chr18_35246113_+	nonsynonymous SNV	ENST00000330501.12	c.A1408G	p.R470G	0.293	0.066	-2.84
ADediting_687097	chr18_35246131_+	nonsynonymous SNV	ENST00000330501.12	c.A1426G	p.S476G	0.002	0.796	-2.71
ADediting_687098	chr18_35246147_+	nonsynonymous SNV	ENST00000330501.12	c.A1442G	p.Y481C	0.0	1.0	-7.32
ADediting_687099	chr18_35246170_+	nonsynonymous SNV	ENST00000330501.12	c.A1465G	p.T489A	1.0	0.009	1.38

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_687071	chr18_35245645_+	exonic
ADediting_687072	chr18_35245690_+	exonic
ADediting_687073	chr18_35245777_+	exonic
ADediting_687074	chr18_35245820_+	exonic
ADediting_687075	chr18_35245868_+	exonic
ADediting_687076	chr18_35245869_+	exonic
ADediting_687077	chr18_35245890_+	exonic
ADediting_687078	chr18_35245895_+	exonic
ADediting_687079	chr18_35245903_+	exonic
ADediting_687080	chr18_35245908_+	exonic
ADediting_687081	chr18_35245917_+	exonic
ADediting_687082	chr18_35245924_+	exonic
ADediting_687083	chr18_35245928_+	exonic
ADediting_687084	chr18_35245938_+	exonic
ADediting_687085	chr18_35245945_+	exonic
ADediting_687086	chr18_35245979_+	exonic
ADediting_687087	chr18_35245987_+	exonic
ADediting_687088	chr18_35245988_+	exonic
ADediting_687089	chr18_35246001_+	exonic
ADediting_687090	chr18_35246036_+	exonic
ADediting_687091	chr18_35246047_+	exonic
ADediting_687092	chr18_35246063_+	exonic
ADediting_687093	chr18_35246071_+	exonic
ADediting_687094	chr18_35246104_+	exonic
ADediting_687095	chr18_35246110_+	exonic
ADediting_687096	chr18_35246113_+	exonic
ADediting_687097	chr18_35246131_+	exonic
ADediting_687098	chr18_35246147_+	exonic
ADediting_687099	chr18_35246170_+	exonic
ADediting_687108	chr18_35247714_+	UTR3
ADediting_687109	chr18_35247727_+	UTR3
ADediting_687110	chr18_35247732_+	UTR3
ADediting_687111	chr18_35247735_+	UTR3
ADediting_687112	chr18_35247745_+	UTR3
ADediting_687113	chr18_35247750_+	UTR3
ADediting_687114	chr18_35247751_+	UTR3
ADediting_687115	chr18_35247752_+	UTR3
ADediting_687116	chr18_35247770_+	UTR3
ADediting_687117	chr18_35247771_+	UTR3
ADediting_687118	chr18_35247788_+	UTR3
ADediting_687119	chr18_35247800_+	UTR3
ADediting_687120	chr18_35247810_+	UTR3
ADediting_687121	chr18_35247812_+	UTR3
ADediting_687122	chr18_35247820_+	UTR3
ADediting_687123	chr18_35247823_+	UTR3
ADediting_687124	chr18_35247844_+	UTR3
ADediting_687125	chr18_35247850_+	UTR3
ADediting_687126	chr18_35247853_+	UTR3
ADediting_687127	chr18_35247854_+	UTR3
ADediting_687128	chr18_35247855_+	UTR3
ADediting_687129	chr18_35247859_+	UTR3
ADediting_687130	chr18_35247870_+	UTR3
ADediting_687131	chr18_35247879_+	UTR3
ADediting_687132	chr18_35247892_+	UTR3
ADediting_687133	chr18_35247904_+	UTR3
ADediting_687134	chr18_35247909_+	UTR3
ADediting_687135	chr18_35247930_+	UTR3
ADediting_687136	chr18_35247931_+	UTR3
ADediting_687137	chr18_35247932_+	UTR3
ADediting_687138	chr18_35247944_+	UTR3
ADediting_687139	chr18_35248577_+	UTR3
ADediting_687140	chr18_35248579_+	UTR3
ADediting_687141	chr18_35248583_+	UTR3
ADediting_687142	chr18_35248591_+	UTR3
ADediting_687143	chr18_35248594_+	UTR3
ADediting_687144	chr18_35248602_+	UTR3
ADediting_687145	chr18_35248607_+	UTR3
ADediting_687146	chr18_35248626_+	UTR3
ADediting_687147	chr18_35248639_+	UTR3
ADediting_687148	chr18_35248640_+	UTR3
ADediting_687149	chr18_35248645_+	UTR3
ADediting_687150	chr18_35248659_+	UTR3
ADediting_687151	chr18_35248670_+	UTR3
ADediting_687152	chr18_35248682_+	UTR3
ADediting_687153	chr18_35248692_+	UTR3
ADediting_687154	chr18_35248699_+	UTR3
ADediting_687155	chr18_35248708_+	UTR3
ADediting_687156	chr18_35248721_+	UTR3
ADediting_687157	chr18_35248727_+	UTR3
ADediting_687158	chr18_35248728_+	UTR3
ADediting_687159	chr18_35248738_+	UTR3
ADediting_687160	chr18_35248744_+	UTR3
ADediting_687161	chr18_35248749_+	UTR3
ADediting_687162	chr18_35248751_+	UTR3
ADediting_687163	chr18_35248762_+	UTR3
ADediting_687164	chr18_35248771_+	UTR3
ADediting_687165	chr18_35248783_+	UTR3
ADediting_687166	chr18_35248787_+	UTR3
ADediting_687167	chr18_35248792_+	UTR3
ADediting_687168	chr18_35248797_+	UTR3
ADediting_687169	chr18_35248799_+	UTR3
ADediting_687170	chr18_35248852_+	UTR3
ADediting_687171	chr18_35249374_+	UTR3
ADediting_687172	chr18_35249378_+	UTR3
ADediting_687173	chr18_35249396_+	UTR3
ADediting_687174	chr18_35249397_+	UTR3
ADediting_687175	chr18_35249402_+	UTR3
ADediting_687176	chr18_35249413_+	UTR3
ADediting_687177	chr18_35249432_+	UTR3
ADediting_687178	chr18_35249437_+	UTR3
ADediting_687179	chr18_35249442_+	UTR3
ADediting_687180	chr18_35249456_+	UTR3
ADediting_687181	chr18_35249465_+	UTR3
ADediting_687182	chr18_35249474_+	UTR3
ADediting_687183	chr18_35249476_+	UTR3
ADediting_687184	chr18_35249507_+	UTR3
ADediting_687185	chr18_35249522_+	UTR3
ADediting_687186	chr18_35249532_+	UTR3
ADediting_687187	chr18_35249538_+	UTR3
ADediting_687188	chr18_35249542_+	UTR3
ADediting_687189	chr18_35249557_+	UTR3
ADediting_687190	chr18_35249559_+	UTR3
ADediting_687191	chr18_35249565_+	UTR3
ADediting_687192	chr18_35249573_+	UTR3
ADediting_687193	chr18_35249574_+	UTR3
ADediting_687194	chr18_35249594_+	UTR3
ADediting_687195	chr18_35249598_+	UTR3
ADediting_687196	chr18_35249603_+	UTR3
ADediting_687197	chr18_35249605_+	UTR3
ADediting_687198	chr18_35249610_+	UTR3
ADediting_1550640	chr18_35245805_+	exonic
ADediting_1550641	chr18_35245813_+	exonic
ADediting_1550642	chr18_35245814_+	exonic
ADediting_1550643	chr18_35245819_+	exonic
ADediting_1550644	chr18_35245889_+	exonic
ADediting_1550645	chr18_35245904_+	exonic
ADediting_1550646	chr18_35245936_+	exonic
ADediting_1550647	chr18_35245952_+	exonic
ADediting_1550648	chr18_35245965_+	exonic
ADediting_1550649	chr18_35246019_+	exonic
ADediting_1550650	chr18_35246041_+	exonic
ADediting_1550651	chr18_35246067_+	exonic
ADediting_1550652	chr18_35247946_+	UTR3
ADediting_1550653	chr18_35248631_+	UTR3
ADediting_1550654	chr18_35249581_+	UTR3
ADediting_1629612	chr18_35245861_+	exonic
ADediting_1629613	chr18_35248558_+	UTR3
ADediting_1629614	chr18_35248689_+	UTR3

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_687108	chr18_35247714_+	SINE	Alu	Name=AluSp
ADediting_687109	chr18_35247727_+	SINE	Alu	Name=AluSp
ADediting_687110	chr18_35247732_+	SINE	Alu	Name=AluSp
ADediting_687111	chr18_35247735_+	SINE	Alu	Name=AluSp
ADediting_687112	chr18_35247745_+	SINE	Alu	Name=AluSp
ADediting_687113	chr18_35247750_+	SINE	Alu	Name=AluSp
ADediting_687114	chr18_35247751_+	SINE	Alu	Name=AluSp
ADediting_687115	chr18_35247752_+	SINE	Alu	Name=AluSp
ADediting_687116	chr18_35247770_+	SINE	Alu	Name=AluSp
ADediting_687117	chr18_35247771_+	SINE	Alu	Name=AluSp
ADediting_687118	chr18_35247788_+	SINE	Alu	Name=AluSp
ADediting_687119	chr18_35247800_+	SINE	Alu	Name=AluSp
ADediting_687120	chr18_35247810_+	SINE	Alu	Name=AluSp
ADediting_687121	chr18_35247812_+	SINE	Alu	Name=AluSp
ADediting_687122	chr18_35247820_+	SINE	Alu	Name=AluSp
ADediting_687123	chr18_35247823_+	SINE	Alu	Name=AluSp
ADediting_687124	chr18_35247844_+	SINE	Alu	Name=AluSp
ADediting_687125	chr18_35247850_+	SINE	Alu	Name=AluSp
ADediting_687126	chr18_35247853_+	SINE	Alu	Name=AluSp
ADediting_687127	chr18_35247854_+	SINE	Alu	Name=AluSp
ADediting_687128	chr18_35247855_+	SINE	Alu	Name=AluSp
ADediting_687129	chr18_35247859_+	SINE	Alu	Name=AluSp
ADediting_687130	chr18_35247870_+	SINE	Alu	Name=AluSp
ADediting_687131	chr18_35247879_+	SINE	Alu	Name=AluSp
ADediting_687132	chr18_35247892_+	SINE	Alu	Name=AluSp
ADediting_687133	chr18_35247904_+	SINE	Alu	Name=AluSp
ADediting_687134	chr18_35247909_+	SINE	Alu	Name=AluSp
ADediting_687135	chr18_35247930_+	SINE	Alu	Name=AluSp
ADediting_687136	chr18_35247931_+	SINE	Alu	Name=AluSp
ADediting_687137	chr18_35247932_+	SINE	Alu	Name=AluSp
ADediting_687138	chr18_35247944_+	SINE	Alu	Name=AluSp
ADediting_687139	chr18_35248577_+	SINE	Alu	Name=AluJr
ADediting_687140	chr18_35248579_+	SINE	Alu	Name=AluJr
ADediting_687141	chr18_35248583_+	SINE	Alu	Name=AluJr
ADediting_687142	chr18_35248591_+	SINE	Alu	Name=AluJr
ADediting_687143	chr18_35248594_+	SINE	Alu	Name=AluJr
ADediting_687144	chr18_35248602_+	SINE	Alu	Name=AluJr
ADediting_687145	chr18_35248607_+	SINE	Alu	Name=AluJr
ADediting_687146	chr18_35248626_+	SINE	Alu	Name=AluJr
ADediting_687147	chr18_35248639_+	SINE	Alu	Name=AluJr
ADediting_687148	chr18_35248640_+	SINE	Alu	Name=AluJr
ADediting_687149	chr18_35248645_+	SINE	Alu	Name=AluJr
ADediting_687150	chr18_35248659_+	SINE	Alu	Name=AluJr
ADediting_687151	chr18_35248670_+	SINE	Alu	Name=AluJr
ADediting_687152	chr18_35248682_+	SINE	Alu	Name=AluJr
ADediting_687153	chr18_35248692_+	SINE	Alu	Name=AluJr
ADediting_687154	chr18_35248699_+	SINE	Alu	Name=AluJr
ADediting_687155	chr18_35248708_+	SINE	Alu	Name=AluJr
ADediting_687156	chr18_35248721_+	SINE	Alu	Name=AluJr
ADediting_687157	chr18_35248727_+	SINE	Alu	Name=AluJr
ADediting_687158	chr18_35248728_+	SINE	Alu	Name=AluJr
ADediting_687159	chr18_35248738_+	SINE	Alu	Name=AluJr
ADediting_687160	chr18_35248744_+	SINE	Alu	Name=AluJr
ADediting_687161	chr18_35248749_+	SINE	Alu	Name=AluJr
ADediting_687162	chr18_35248751_+	SINE	Alu	Name=AluJr
ADediting_687163	chr18_35248762_+	SINE	Alu	Name=AluJr
ADediting_687164	chr18_35248771_+	SINE	Alu	Name=AluJr
ADediting_687165	chr18_35248783_+	SINE	Alu	Name=AluJr
ADediting_687166	chr18_35248787_+	SINE	Alu	Name=AluJr
ADediting_687167	chr18_35248792_+	SINE	Alu	Name=AluJr
ADediting_687168	chr18_35248797_+	SINE	Alu	Name=AluJr
ADediting_687169	chr18_35248799_+	SINE	Alu	Name=AluJr
ADediting_687170	chr18_35248852_+	SINE	Alu	Name=AluJr
ADediting_687171	chr18_35249374_+	SINE	Alu	Name=AluSx
ADediting_687172	chr18_35249378_+	SINE	Alu	Name=AluSx
ADediting_687173	chr18_35249396_+	SINE	Alu	Name=AluSx
ADediting_687174	chr18_35249397_+	SINE	Alu	Name=AluSx
ADediting_687175	chr18_35249402_+	SINE	Alu	Name=AluSx
ADediting_687176	chr18_35249413_+	SINE	Alu	Name=AluSx
ADediting_687177	chr18_35249432_+	SINE	Alu	Name=AluSx
ADediting_687178	chr18_35249437_+	SINE	Alu	Name=AluSx
ADediting_687179	chr18_35249442_+	SINE	Alu	Name=AluSx
ADediting_687180	chr18_35249456_+	SINE	Alu	Name=AluSx
ADediting_687181	chr18_35249465_+	SINE	Alu	Name=AluSx
ADediting_687182	chr18_35249474_+	SINE	Alu	Name=AluSx
ADediting_687183	chr18_35249476_+	SINE	Alu	Name=AluSx
ADediting_687184	chr18_35249507_+	SINE	Alu	Name=AluSx
ADediting_687185	chr18_35249522_+	SINE	Alu	Name=AluSx
ADediting_687186	chr18_35249532_+	SINE	Alu	Name=AluSx
ADediting_687187	chr18_35249538_+	SINE	Alu	Name=AluSx
ADediting_687188	chr18_35249542_+	SINE	Alu	Name=AluSx
ADediting_687189	chr18_35249557_+	SINE	Alu	Name=AluSx
ADediting_687190	chr18_35249559_+	SINE	Alu	Name=AluSx
ADediting_687191	chr18_35249565_+	SINE	Alu	Name=AluSx
ADediting_687192	chr18_35249573_+	SINE	Alu	Name=AluSx
ADediting_687193	chr18_35249574_+	SINE	Alu	Name=AluSx
ADediting_687194	chr18_35249594_+	SINE	Alu	Name=AluSx
ADediting_687195	chr18_35249598_+	SINE	Alu	Name=AluSx
ADediting_687196	chr18_35249603_+	SINE	Alu	Name=AluSx
ADediting_687197	chr18_35249605_+	SINE	Alu	Name=AluSx
ADediting_687198	chr18_35249610_+	SINE	Alu	Name=AluSx
ADediting_1550652	chr18_35247946_+	SINE	Alu	Name=AluSp
ADediting_1550653	chr18_35248631_+	SINE	Alu	Name=AluJr
ADediting_1550654	chr18_35249581_+	SINE	Alu	Name=AluSx
ADediting_1629614	chr18_35248689_+	SINE	Alu	Name=AluJr

Top

RNA A-to-I editing events in the alternative splicing sites for ZNF397

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF397

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

Top

Protein coding region RNA A-to-I editings for ZNF397

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for ZNF397

RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1550654	chr18_35249581_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-5587-3p	chr18	35249574	35249580	7mer-m8	35249560	35249581	150	-22.5
ADediting_1550654	chr18_35249581_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6840-5p	chr18	35249575	35249581	7mer-m8	35249559	35249582	145	-24.86
ADediting_1629614	chr18_35248689_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-1468-5p	chr18	35248684	35248691	8mer-1a	35248671	35248691	147	-9.98
ADediting_687108	chr18_35247714_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3940-3p	chr18	35247711	35247717	7mer-m8	35247697	35247718	156	-27.31
ADediting_687108	chr18_35247714_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4442	chr18	35247708	35247714	7mer-m8	35247699	35247715	167	-27.92
ADediting_687109	chr18_35247727_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-324-3p	chr18	35247723	35247729	7mer-m8	35247708	35247730	148	-24.44
ADediting_687109	chr18_35247727_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4252	chr18	35247724	35247731	8mer-1a	35247711	35247731	149	-22.82
ADediting_687109	chr18_35247727_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4793-3p	chr18	35247720	35247726	7mer-m8	35247705	35247727	149	-19.67
ADediting_687111	chr18_35247735_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-548ao-3p	chr18	35247732	35247738	7mer-m8	35247719	35247739	154	-20.91
ADediting_687112	chr18_35247745_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4285	chr18	35247741	35247747	7mer-m8	35247731	35247748	148	-22.27
ADediting_687114	chr18_35247751_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-5007-5p	chr18	35247749	35247755	7mer-m8	35247732	35247756	154	-18.06
ADediting_687117	chr18_35247771_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6078	chr18	35247767	35247774	8mer-1a	35247755	35247774	148	-20.42
ADediting_687119	chr18_35247800_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4691-3p	chr18	35247797	35247803	7mer-m8	35247777	35247804	146	-25
ADediting_687123	chr18_35247823_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4746-3p	chr18	35247817	35247823	7mer-m8	35247802	35247824	153	-23.89
ADediting_687127	chr18_35247854_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6818-3p	chr18	35247852	35247858	7mer-m8	35247838	35247859	143	-14
ADediting_687127	chr18_35247854_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6845-3p	chr18	35247849	35247856	8mer-1a	35247836	35247856	140	-13.06
ADediting_687127	chr18_35247854_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6895-3p	chr18	35247851	35247858	8mer-1a	35247837	35247858	140	-14.03
ADediting_687128	chr18_35247855_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3667-3p	chr18	35247849	35247856	8mer-1a	35247835	35247856	140	-11.27
ADediting_687132	chr18_35247892_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-146a-5p	chr18	35247890	35247896	7mer-m8	35247876	35247897	148	-16.38
ADediting_687132	chr18_35247892_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-146b-5p	chr18	35247890	35247896	7mer-m8	35247875	35247897	148	-20.23
ADediting_687132	chr18_35247892_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-7153-5p	chr18	35247890	35247896	7mer-m8	35247872	35247897	147	-16.04
ADediting_687133	chr18_35247904_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4740-3p	chr18	35247899	35247905	7mer-m8	35247881	35247906	142	-20.87
ADediting_687136	chr18_35247931_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-326	chr18	35247926	35247932	7mer-m8	35247914	35247933	140	-14.65
ADediting_687136	chr18_35247931_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-330-5p	chr18	35247926	35247932	7mer-m8	35247912	35247933	140	-20.46
ADediting_687136	chr18_35247931_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-514a-5p	chr18	35247927	35247933	7mer-m8	35247911	35247934	146	-16.34
ADediting_687136	chr18_35247931_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-637	chr18	35247924	35247931	8mer-1a	35247905	35247931	144	-28.38
ADediting_687137	chr18_35247932_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3189-3p	chr18	35247926	35247932	7mer-m8	35247911	35247933	149	-23.61
ADediting_687137	chr18_35247932_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6813-3p	chr18	35247927	35247933	7mer-m8	35247914	35247934	140	-12.55
ADediting_687141	chr18_35248583_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-10399-5p	chr18	35248580	35248586	7mer-m8	35248566	35248587	148	-9.8
ADediting_687141	chr18_35248583_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3934-5p	chr18	35248576	35248582	7mer-m8	35248561	35248583	157	-25.42
ADediting_687141	chr18_35248583_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-552-3p	chr18	35248577	35248584	8mer-1a	35248564	35248584	140	-14.1
ADediting_687141	chr18_35248583_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6504-3p	chr18	35248580	35248586	7mer-m8	35248566	35248587	149	-19.53
ADediting_687142	chr18_35248591_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-371a-3p	chr18	35248589	35248595	7mer-m8	35248574	35248596	157	-20.54
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-518a-3p	chr18	35248591	35248597	7mer-m8	35248577	35248598	151	-14.23
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-518b	chr18	35248591	35248597	7mer-m8	35248576	35248598	157	-20.17
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-518c-3p	chr18	35248591	35248597	7mer-m8	35248576	35248598	154	-20.98
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-518d-3p	chr18	35248591	35248597	7mer-m8	35248577	35248598	153	-16.65
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-518e-3p	chr18	35248590	35248596	7mer-m8	35248578	35248597	149	-11.34
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-518f-3p	chr18	35248591	35248597	7mer-m8	35248577	35248598	153	-15.44
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-526a-3p	chr18	35248591	35248597	7mer-m8	35248576	35248598	157	-15.67
ADediting_687148	chr18_35248640_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-12113	chr18	35248633	35248639	7mer-m8	35248619	35248640	146	-18.07
ADediting_687148	chr18_35248640_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-1234-3p	chr18	35248637	35248644	8mer-1a	35248623	35248644	156	-21.63
ADediting_687148	chr18_35248640_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4539	chr18	35248633	35248639	7mer-m8	35248615	35248640	147	-17.28
ADediting_687148	chr18_35248640_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-7107-5p	chr18	35248637	35248644	8mer-1a	35248623	35248644	142	-21.5
ADediting_687149	chr18_35248645_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-1538	chr18	35248641	35248647	7mer-m8	35248624	35248648	149	-22.95
ADediting_687149	chr18_35248645_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4745-3p	chr18	35248641	35248647	7mer-m8	35248626	35248648	149	-26.06
ADediting_687149	chr18_35248645_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4747-3p	chr18	35248642	35248648	7mer-m8	35248628	35248649	156	-26.88
ADediting_687150	chr18_35248659_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6511a-3p	chr18	35248657	35248664	8mer-1a	35248642	35248664	151	-20.8
ADediting_687150	chr18_35248659_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6511b-3p	chr18	35248657	35248664	8mer-1a	35248646	35248664	148	-18.89
ADediting_687151	chr18_35248670_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-483-5p	chr18	35248666	35248672	7mer-m8	35248652	35248673	140	-14.01
ADediting_687153	chr18_35248692_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3664-5p	chr18	35248686	35248692	7mer-m8	35248672	35248693	142	-11.45
ADediting_687155	chr18_35248708_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-767-5p	chr18	35248706	35248712	7mer-1a	35248692	35248712	145	-26.01
ADediting_687158	chr18_35248728_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6742-3p	chr18	35248722	35248728	7mer-m8	35248710	35248729	141	-15.96
ADediting_687158	chr18_35248728_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-7851-3p	chr18	35248723	35248730	8mer-1a	35248709	35248730	143	-23.04
ADediting_687159	chr18_35248738_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3943	chr18	35248735	35248741	7mer-m8	35248722	35248742	158	-26.55
ADediting_687160	chr18_35248744_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6802-3p	chr18	35248742	35248748	7mer-m8	35248728	35248749	159	-24.81
ADediting_687160	chr18_35248744_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6849-3p	chr18	35248737	35248743	7mer-m8	35248723	35248744	140	-17.86
ADediting_687161	chr18_35248749_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-1224-3p	chr18	35248743	35248750	8mer-1a	35248731	35248750	156	-26.75
ADediting_687161	chr18_35248749_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-1260a	chr18	35248744	35248750	7mer-m8	35248734	35248751	164	-28.81
ADediting_687161	chr18_35248749_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-1260b	chr18	35248744	35248750	7mer-m8	35248733	35248751	161	-23.52
ADediting_687161	chr18_35248749_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-532-3p	chr18	35248745	35248751	7mer-m8	35248733	35248752	147	-24.82
ADediting_687163	chr18_35248762_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3136-3p	chr18	35248758	35248764	7mer-m8	35248744	35248765	152	-17.75
ADediting_687163	chr18_35248762_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-7155-3p	chr18	35248758	35248764	7mer-m8	35248744	35248765	153	-25.82
ADediting_687163	chr18_35248762_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-7160-3p	chr18	35248760	35248766	7mer-m8	35248747	35248767	148	-22.9
ADediting_687166	chr18_35248787_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-181a-2-3p	chr18	35248780	35248786	7mer-m8	35248765	35248787	156	-22.91
ADediting_687166	chr18_35248787_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4286	chr18	35248782	35248788	7mer-m8	35248773	35248789	140	-16.39
ADediting_687166	chr18_35248787_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4758-3p	chr18	35248783	35248790	8mer-1a	35248770	35248790	143	-21.76
ADediting_687167	chr18_35248792_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6747-3p	chr18	35248786	35248793	8mer-1a	35248773	35248793	148	-21.42
ADediting_687170	chr18_35248852_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-204-5p	chr18	35248848	35248855	8mer-1a	35248834	35248855	147	-10.74
ADediting_687170	chr18_35248852_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-211-5p	chr18	35248848	35248855	8mer-1a	35248834	35248855	147	-10.74
ADediting_687170	chr18_35248852_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4446-5p	chr18	35248850	35248857	8mer-1a	35248836	35248857	140	-12.75
ADediting_687170	chr18_35248852_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4755-5p	chr18	35248849	35248856	8mer-1a	35248835	35248856	140	-13.49
ADediting_687170	chr18_35248852_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-5006-3p	chr18	35248849	35248856	8mer-1a	35248836	35248856	145	-14.71
ADediting_687170	chr18_35248852_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6832-3p	chr18	35248847	35248854	8mer-1a	35248835	35248854	147	-9.61
ADediting_687171	chr18_35249374_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-1234-3p	chr18	35249367	35249373	7mer-m8	35249353	35249374	140	-17.44
ADediting_687171	chr18_35249374_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-7107-5p	chr18	35249367	35249373	7mer-m8	35249353	35249374	143	-21.83
ADediting_687172	chr18_35249378_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6720-3p	chr18	35249372	35249379	8mer-1a	35249358	35249379	140	-17.32
ADediting_687173	chr18_35249396_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-513a-5p	chr18	35249390	35249396	7mer-m8	35249380	35249397	152	-17.32
ADediting_687173	chr18_35249396_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-638	chr18	35249395	35249401	7mer-1a	35249377	35249401	153	-31.53
ADediting_687174	chr18_35249397_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-8052	chr18	35249395	35249401	7mer-1a	35249383	35249401	148	-29.06
ADediting_687175	chr18_35249402_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-371a-3p	chr18	35249400	35249406	7mer-m8	35249385	35249407	144	-15.05
ADediting_687176	chr18_35249413_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3943	chr18	35249410	35249416	7mer-m8	35249396	35249417	143	-22.28
ADediting_687178	chr18_35249437_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4726-3p	chr18	35249431	35249438	8mer-1a	35249415	35249438	153	-26.08
ADediting_687182	chr18_35249474_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-23a-5p	chr18	35249472	35249478	7mer-m8	35249458	35249479	146	-20.32
ADediting_687182	chr18_35249474_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-23b-5p	chr18	35249472	35249478	7mer-m8	35249459	35249479	154	-18.57
ADediting_687183	chr18_35249476_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-412-3p	chr18	35249469	35249475	7mer-m8	35249450	35249476	144	-17.8
ADediting_687183	chr18_35249476_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4508	chr18	35249474	35249480	7mer-m8	35249465	35249481	140	-21.85
ADediting_687183	chr18_35249476_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6754-3p	chr18	35249469	35249475	7mer-m8	35249452	35249476	143	-14.64
ADediting_687186	chr18_35249532_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-140-3p	chr18	35249527	35249533	7mer-m8	35249511	35249534	152	-25.33
ADediting_687188	chr18_35249542_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-1207-3p	chr18	35249535	35249541	7mer-m8	35249524	35249542	145	-13.53
ADediting_687188	chr18_35249542_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-646	chr18	35249537	35249543	7mer-m8	35249525	35249544	148	-22.3
ADediting_687189	chr18_35249557_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6747-3p	chr18	35249554	35249561	8mer-1a	35249540	35249561	150	-24.11
ADediting_687190	chr18_35249559_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-340-3p	chr18	35249553	35249559	7mer-m8	35249538	35249560	159	-26.14
ADediting_687190	chr18_35249559_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6827-3p	chr18	35249553	35249559	7mer-m8	35249541	35249560	147	-23.4
ADediting_687191	chr18_35249565_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6845-3p	chr18	35249558	35249564	7mer-m8	35249545	35249565	155	-22.15
ADediting_687191	chr18_35249565_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-891b	chr18	35249563	35249569	7mer-1a	35249548	35249569	150	-20.75
ADediting_687192	chr18_35249573_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-5581-3p	chr18	35249567	35249573	7mer-m8	35249549	35249574	144	-17.55
ADediting_687193	chr18_35249574_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4437	chr18	35249570	35249576	7mer-m8	35249557	35249577	142	-16.5
ADediting_687193	chr18_35249574_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6847-3p	chr18	35249568	35249574	7mer-m8	35249554	35249575	160	-23.2
ADediting_687195	chr18_35249598_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-324-3p	chr18	35249591	35249597	7mer-m8	35249576	35249598	141	-23.48
ADediting_687195	chr18_35249598_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6075	chr18	35249595	35249602	8mer-1a	35249581	35249602	148	-22.96
ADediting_687197	chr18_35249605_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3150a-5p	chr18	35249600	35249606	7mer-m8	35249586	35249607	145	-22.94
ADediting_687197	chr18_35249605_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3150b-5p	chr18	35249600	35249606	7mer-m8	35249588	35249607	145	-18.91
ADediting_687198	chr18_35249610_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-891a-3p	chr18	35249607	35249613	7mer-m8	35249592	35249614	152	-19.33

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1550654	chr18_35249581_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-1306-5p	chr18	35249578	35249584	7mer-m8	35249564	35249585	145	-23.65
ADediting_1629614	chr18_35248689_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4652-3p	chr18	35248685	35248691	7mer-m8	35248671	35248692	142	-8.14
ADediting_1629614	chr18_35248689_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4778-5p	chr18	35248686	35248692	7mer-m8	35248672	35248693	140	-8.72
ADediting_687108	chr18_35247714_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3116	chr18	35247710	35247716	7mer-m8	35247699	35247717	150	-19.54
ADediting_687108	chr18_35247714_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3690	chr18	35247709	35247715	7mer-m8	35247695	35247716	149	-19.94
ADediting_687108	chr18_35247714_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4638-3p	chr18	35247708	35247714	7mer-m8	35247693	35247715	141	-20.94
ADediting_687109	chr18_35247727_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-25-3p	chr18	35247721	35247727	7mer-m8	35247705	35247728	153	-25.27
ADediting_687109	chr18_35247727_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-32-5p	chr18	35247721	35247727	7mer-m8	35247707	35247728	144	-12.53
ADediting_687109	chr18_35247727_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-363-3p	chr18	35247721	35247727	7mer-m8	35247707	35247728	147	-16.12
ADediting_687109	chr18_35247727_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-92a-3p	chr18	35247721	35247727	7mer-m8	35247711	35247728	155	-26.92
ADediting_687112	chr18_35247745_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6807-5p	chr18	35247738	35247744	7mer-m8	35247724	35247745	141	-17.44
ADediting_687118	chr18_35247788_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4478	chr18	35247785	35247791	7mer-m8	35247777	35247792	149	-22.36
ADediting_687118	chr18_35247788_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4649-3p	chr18	35247782	35247788	7mer-m8	35247769	35247789	140	-14.11
ADediting_687118	chr18_35247788_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-7160-5p	chr18	35247783	35247789	7mer-m8	35247770	35247790	146	-20.4
ADediting_687119	chr18_35247800_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-5690	chr18	35247797	35247803	7mer-m8	35247784	35247804	145	-18.27
ADediting_687125	chr18_35247850_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-384	chr18	35247848	35247854	7mer-1a	35247835	35247854	144	-11.08
ADediting_687126	chr18_35247853_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3124-3p	chr18	35247849	35247856	8mer-1a	35247835	35247856	142	-8.97
ADediting_687126	chr18_35247853_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-384	chr18	35247848	35247854	7mer-1a	35247835	35247854	144	-11.08
ADediting_687126	chr18_35247853_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6830-3p	chr18	35247851	35247858	8mer-1a	35247836	35247858	146	-14.22
ADediting_687127	chr18_35247854_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3124-3p	chr18	35247849	35247856	8mer-1a	35247835	35247856	142	-8.97
ADediting_687127	chr18_35247854_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-384	chr18	35247848	35247854	7mer-1a	35247835	35247854	144	-11.08
ADediting_687127	chr18_35247854_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-511-5p	chr18	35247852	35247858	7mer-m8	35247840	35247859	142	-8.77
ADediting_687127	chr18_35247854_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6830-3p	chr18	35247851	35247858	8mer-1a	35247836	35247858	146	-14.22
ADediting_687128	chr18_35247855_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3124-3p	chr18	35247849	35247856	8mer-1a	35247835	35247856	142	-8.97
ADediting_687128	chr18_35247855_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-511-5p	chr18	35247852	35247858	7mer-m8	35247840	35247859	142	-8.77
ADediting_687128	chr18_35247855_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6830-3p	chr18	35247851	35247858	8mer-1a	35247836	35247858	146	-14.22
ADediting_687129	chr18_35247859_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-10a-5p	chr18	35247856	35247862	7mer-m8	35247841	35247863	153	-16.93
ADediting_687129	chr18_35247859_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-10b-5p	chr18	35247856	35247862	7mer-m8	35247841	35247863	145	-15.18
ADediting_687129	chr18_35247859_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-339-5p	chr18	35247855	35247861	7mer-m8	35247838	35247862	151	-20.29
ADediting_687129	chr18_35247859_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4421	chr18	35247854	35247860	7mer-m8	35247840	35247861	150	-14.36
ADediting_687129	chr18_35247859_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-511-5p	chr18	35247852	35247858	7mer-m8	35247840	35247859	142	-8.77
ADediting_687130	chr18_35247870_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4531	chr18	35247863	35247869	7mer-m8	35247854	35247870	151	-18.2
ADediting_687131	chr18_35247879_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4293	chr18	35247876	35247882	7mer-m8	35247867	35247883	146	-21.19
ADediting_687133	chr18_35247904_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3622a-3p	chr18	35247901	35247908	8mer-1a	35247887	35247908	144	-15.4
ADediting_687133	chr18_35247904_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3622b-3p	chr18	35247901	35247908	8mer-1a	35247888	35247908	152	-18.43
ADediting_687133	chr18_35247904_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4324	chr18	35247899	35247905	7mer-m8	35247887	35247906	142	-13.04
ADediting_687135	chr18_35247930_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-7109-5p	chr18	35247923	35247930	8mer-1a	35247910	35247930	151	-20.69
ADediting_687139	chr18_35248577_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6807-5p	chr18	35248570	35248576	7mer-m8	35248555	35248577	152	-23.76
ADediting_687142	chr18_35248591_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4720-5p	chr18	35248585	35248591	7mer-m8	35248571	35248592	155	-13.78
ADediting_687142	chr18_35248591_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4799-3p	chr18	35248585	35248591	7mer-m8	35248571	35248592	141	-11.03
ADediting_687142	chr18_35248591_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-512-3p	chr18	35248589	35248595	7mer-m8	35248572	35248596	155	-19.07
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-302b-3p	chr18	35248590	35248596	7mer-m8	35248577	35248597	153	-12.97
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-302c-3p	chr18	35248590	35248596	7mer-m8	35248576	35248597	151	-14.89
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-302d-3p	chr18	35248590	35248596	7mer-m8	35248576	35248597	155	-16.27
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-302e	chr18	35248590	35248596	7mer-m8	35248581	35248597	149	-11.15
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-512-3p	chr18	35248589	35248595	7mer-m8	35248572	35248596	155	-19.07
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-519d-3p	chr18	35248591	35248597	7mer-m8	35248578	35248598	154	-12.91
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-520a-3p	chr18	35248590	35248596	7mer-m8	35248575	35248597	148	-11.28
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-520b-3p	chr18	35248590	35248596	7mer-m8	35248576	35248597	152	-14.48
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-520c-3p	chr18	35248590	35248596	7mer-m8	35248577	35248597	154	-14.48
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-520d-3p	chr18	35248590	35248596	7mer-m8	35248574	35248597	149	-15.59
ADediting_687143	chr18_35248594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-520e-3p	chr18	35248590	35248596	7mer-m8	35248577	35248597	151	-13.81
ADediting_687144	chr18_35248602_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-150-5p	chr18	35248596	35248602	7mer-m8	35248582	35248603	140	-15.8
ADediting_687144	chr18_35248602_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6778-3p	chr18	35248598	35248604	7mer-m8	35248585	35248605	143	-13.97
ADediting_687144	chr18_35248602_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6878-3p	chr18	35248600	35248607	8mer-1a	35248587	35248607	142	-15.12
ADediting_687145	chr18_35248607_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6878-3p	chr18	35248600	35248607	8mer-1a	35248587	35248607	142	-15.12
ADediting_687149	chr18_35248645_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3155a	chr18	35248643	35248649	7mer-m8	35248630	35248650	147	-24.23
ADediting_687149	chr18_35248645_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3155b	chr18	35248643	35248649	7mer-m8	35248633	35248650	147	-22.29
ADediting_687149	chr18_35248645_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4638-5p	chr18	35248639	35248645	7mer-m8	35248626	35248646	140	-17.62
ADediting_687149	chr18_35248645_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-484	chr18	35248643	35248649	7mer-m8	35248627	35248650	145	-20.46
ADediting_687151	chr18_35248670_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6890-5p	chr18	35248664	35248670	7mer-m8	35248651	35248671	140	-12.58
ADediting_687153	chr18_35248692_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4652-3p	chr18	35248685	35248691	7mer-m8	35248671	35248692	142	-8.14
ADediting_687153	chr18_35248692_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4778-5p	chr18	35248686	35248692	7mer-m8	35248672	35248693	140	-8.72
ADediting_687154	chr18_35248699_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3128	chr18	35248693	35248700	8mer-1a	35248678	35248700	146	-15.32
ADediting_687155	chr18_35248708_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4999-3p	chr18	35248704	35248710	7mer-m8	35248692	35248711	140	-12.41
ADediting_687156	chr18_35248721_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3618	chr18	35248717	35248723	7mer-m8	35248703	35248724	148	-11.83
ADediting_687156	chr18_35248721_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-7151-3p	chr18	35248714	35248720	7mer-m8	35248700	35248721	146	-18.74
ADediting_687157	chr18_35248727_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-12126	chr18	35248723	35248730	8mer-1a	35248706	35248730	141	-15.25
ADediting_687158	chr18_35248728_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-12126	chr18	35248723	35248730	8mer-1a	35248706	35248730	141	-15.25
ADediting_687159	chr18_35248738_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-150-5p	chr18	35248732	35248738	7mer-m8	35248717	35248739	145	-16.62
ADediting_687159	chr18_35248738_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6778-3p	chr18	35248734	35248740	7mer-m8	35248721	35248741	151	-15.8
ADediting_687161	chr18_35248749_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-12125	chr18	35248745	35248751	7mer-m8	35248730	35248752	154	-23.13
ADediting_687161	chr18_35248749_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6800-3p	chr18	35248747	35248753	7mer-m8	35248731	35248754	148	-20.37
ADediting_687162	chr18_35248751_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-12125	chr18	35248745	35248751	7mer-m8	35248730	35248752	154	-23.13
ADediting_687162	chr18_35248751_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6800-3p	chr18	35248747	35248753	7mer-m8	35248731	35248754	148	-20.37
ADediting_687163	chr18_35248762_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4437	chr18	35248759	35248765	7mer-m8	35248745	35248766	149	-18.43
ADediting_687163	chr18_35248762_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-5088-5p	chr18	35248760	35248766	7mer-m8	35248743	35248767	152	-24.94
ADediting_687164	chr18_35248771_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-617	chr18	35248767	35248773	7mer-m8	35248753	35248774	140	-16.66
ADediting_687165	chr18_35248783_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-181b-2-3p	chr18	35248780	35248786	7mer-m8	35248768	35248787	140	-16.43
ADediting_687165	chr18_35248783_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-181b-3p	chr18	35248780	35248786	7mer-m8	35248766	35248787	150	-19.46
ADediting_687165	chr18_35248783_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4420	chr18	35248780	35248786	7mer-m8	35248766	35248787	153	-15.66
ADediting_687166	chr18_35248787_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-181b-2-3p	chr18	35248780	35248786	7mer-m8	35248768	35248787	140	-16.43
ADediting_687166	chr18_35248787_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-181b-3p	chr18	35248780	35248786	7mer-m8	35248766	35248787	150	-19.46
ADediting_687166	chr18_35248787_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3152-5p	chr18	35248785	35248791	7mer-m8	35248771	35248792	140	-12.06
ADediting_687166	chr18_35248787_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4420	chr18	35248780	35248786	7mer-m8	35248766	35248787	153	-15.66
ADediting_687167	chr18_35248792_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3152-5p	chr18	35248785	35248791	7mer-m8	35248771	35248792	140	-12.06
ADediting_687171	chr18_35249374_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-550a-3-5p	chr18	35249372	35249379	8mer-1a	35249360	35249379	140	-12.5
ADediting_687171	chr18_35249374_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-550a-5p	chr18	35249372	35249379	8mer-1a	35249358	35249379	143	-18.32
ADediting_687172	chr18_35249378_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-550a-3-5p	chr18	35249372	35249379	8mer-1a	35249360	35249379	140	-12.5
ADediting_687172	chr18_35249378_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-550a-5p	chr18	35249372	35249379	8mer-1a	35249358	35249379	143	-18.32
ADediting_687172	chr18_35249378_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-550b-2-5p	chr18	35249373	35249379	7mer-m8	35249360	35249380	146	-17.23
ADediting_687172	chr18_35249378_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6529-3p	chr18	35249374	35249380	7mer-m8	35249360	35249381	145	-13.96
ADediting_687172	chr18_35249378_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6889-3p	chr18	35249374	35249380	7mer-m8	35249362	35249381	140	-15.01
ADediting_687173	chr18_35249396_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-10399-5p	chr18	35249391	35249397	7mer-m8	35249377	35249398	144	-10.53
ADediting_687173	chr18_35249396_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-7151-3p	chr18	35249389	35249396	8mer-1a	35249380	35249396	146	-17.62
ADediting_687174	chr18_35249397_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-10399-5p	chr18	35249391	35249397	7mer-m8	35249377	35249398	144	-10.53
ADediting_687174	chr18_35249397_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-5089-5p	chr18	35249395	35249401	7mer-m8	35249383	35249402	146	-13.24
ADediting_687175	chr18_35249402_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-5089-5p	chr18	35249395	35249401	7mer-m8	35249383	35249402	146	-13.24
ADediting_687175	chr18_35249402_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-512-3p	chr18	35249400	35249406	7mer-m8	35249386	35249407	149	-15
ADediting_687175	chr18_35249402_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6506-5p	chr18	35249396	35249402	7mer-m8	35249381	35249403	144	-16.21
ADediting_687176	chr18_35249413_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-150-5p	chr18	35249407	35249413	7mer-m8	35249393	35249414	140	-15.8
ADediting_687176	chr18_35249413_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6778-3p	chr18	35249409	35249415	7mer-m8	35249396	35249416	143	-14.47
ADediting_687177	chr18_35249432_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-125a-3p	chr18	35249429	35249436	8mer-1a	35249415	35249436	144	-17.27
ADediting_687177	chr18_35249432_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-640	chr18	35249425	35249431	7mer-m8	35249410	35249432	150	-24.16
ADediting_687178	chr18_35249437_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4695-3p	chr18	35249434	35249441	8mer-1a	35249413	35249441	144	-27.07
ADediting_687180	chr18_35249456_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-3663-5p	chr18	35249450	35249456	7mer-m8	35249438	35249457	148	-21.98
ADediting_687180	chr18_35249456_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6131	chr18	35249451	35249457	7mer-m8	35249440	35249458	140	-18.33
ADediting_687180	chr18_35249456_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6843-3p	chr18	35249449	35249455	7mer-m8	35249437	35249456	152	-19.47
ADediting_687180	chr18_35249456_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6848-3p	chr18	35249449	35249455	7mer-m8	35249439	35249456	142	-14.3
ADediting_687181	chr18_35249465_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-1279	chr18	35249463	35249469	7mer-m8	35249454	35249470	143	-8.47
ADediting_687183	chr18_35249476_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-193b-5p	chr18	35249473	35249479	7mer-m8	35249459	35249480	142	-17.85
ADediting_687185	chr18_35249522_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4715-3p	chr18	35249515	35249521	7mer-m8	35249500	35249522	152	-20.55
ADediting_687186	chr18_35249532_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-7151-3p	chr18	35249525	35249531	7mer-m8	35249512	35249532	140	-18.29
ADediting_687186	chr18_35249532_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-8052	chr18	35249531	35249537	7mer-1a	35249517	35249537	149	-25.45
ADediting_687188	chr18_35249542_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-562	chr18	35249538	35249544	7mer-m8	35249525	35249545	151	-14.2
ADediting_687188	chr18_35249542_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-5697	chr18	35249539	35249545	7mer-m8	35249525	35249546	146	-18.01
ADediting_687189	chr18_35249557_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4421	chr18	35249554	35249561	8mer-1a	35249536	35249561	142	-17.35
ADediting_687189	chr18_35249557_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-5699-3p	chr18	35249554	35249561	8mer-1a	35249540	35249561	147	-20.98
ADediting_687189	chr18_35249557_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6748-3p	chr18	35249555	35249561	7mer-1a	35249541	35249561	142	-28.13
ADediting_687190	chr18_35249559_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4421	chr18	35249554	35249561	8mer-1a	35249536	35249561	142	-17.35
ADediting_687190	chr18_35249559_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-5699-3p	chr18	35249554	35249561	8mer-1a	35249540	35249561	147	-20.98
ADediting_687190	chr18_35249559_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-6748-3p	chr18	35249555	35249561	7mer-1a	35249541	35249561	142	-28.13
ADediting_687191	chr18_35249565_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-5571-5p	chr18	35249560	35249566	7mer-m8	35249545	35249567	142	-26.87
ADediting_687192	chr18_35249573_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-1206	chr18	35249568	35249574	7mer-m8	35249555	35249575	153	-12.7
ADediting_687193	chr18_35249574_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-1206	chr18	35249568	35249574	7mer-m8	35249555	35249575	153	-12.7
ADediting_687194	chr18_35249594_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4772-3p	chr18	35249588	35249594	7mer-m8	35249573	35249595	154	-17.72
ADediting_687195	chr18_35249598_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4284	chr18	35249594	35249600	7mer-m8	35249584	35249601	151	-17.62
ADediting_687196	chr18_35249603_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-4638-5p	chr18	35249597	35249604	8mer-1a	35249585	35249604	146	-20.28
ADediting_687198	chr18_35249610_+	ENSG00000186812.13	ENST00000330501.12	ZNF397-202	hsa-miR-150-3p	chr18	35249606	35249612	7mer-m8	35249592	35249613	152	-16.72

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1535954

chr14_101045974_+

ENSG00000186812.13

ENST00000585800.1

ZNF397-204

hsa-miR-381-3p

chr18

35243927

35243933

7mer-m8

35243913

35243934

140

-13.02

ADediting_1535954

chr14_101045974_+

ENSG00000186812.13

ENST00000591206.5

ZNF397-209

hsa-miR-381-3p

chr18

35243927

35243933

7mer-m8

35243913

35243934

140

-13.02

ADediting_1556067

chr19_40282625_-

ENSG00000186812.13

ENST00000330501.12

ZNF397-202

hsa-miR-641

chr18

35249646

35249652

7mer-1a

35249626

35249652

141

-23.87

ADediting_1643790

chr3_121049689_+

ENSG00000186812.13

ENST00000261333.10

ZNF397-201

hsa-miR-5682

chr18

35257983

35257989

7mer-m8

35257968

35257990

153

-22.52

ADediting_1643790

chr3_121049689_+

ENSG00000186812.13

ENST00000355632.8

ZNF397-203

hsa-miR-5682

chr18

35257983

35257989

7mer-m8

35257968

35257990

153

-22.52

ADediting_1643790

chr3_121049689_+

ENSG00000186812.13

ENST00000592264.1

ZNF397-211

hsa-miR-5682

chr18

35257983

35257989

7mer-m8

35257968

35257990

153

-22.52

ADediting_98288

chr1_32086990_+

ENSG00000186812.13

ENST00000330501.12

ZNF397-202

hsa-miR-5585-3p

chr18

35248414

35248421

8mer-1a

35248400

35248421

162

-20.38

ADediting_98289

chr1_32086992_+

ENSG00000186812.13

ENST00000261333.10

ZNF397-201

hsa-miR-5585-3p

chr18

35258231

35258237

7mer-m8

35258217

35258238

160

-22.78

ADediting_98289

chr1_32086992_+

ENSG00000186812.13

ENST00000355632.8

ZNF397-203

hsa-miR-5585-3p

chr18

35258231

35258237

7mer-m8

35258217

35258238

160

-22.78

ADediting_98289

chr1_32086992_+

ENSG00000186812.13

ENST00000592264.1

ZNF397-211

hsa-miR-5585-3p

chr18

35258231

35258237

7mer-m8

35258217

35258238

160

-22.78

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1097295

chr3_85385762_+

ENSG00000186812.13

ENST00000330501.12

ZNF397-202

hsa-miR-5688

chr18

35246356

35246363

8mer-1a

35246344

35246363

144

-10.91

ADediting_1391023

chr8_140732605_-

ENSG00000186812.13

ENST00000330501.12

ZNF397-202

hsa-miR-151a-3p

chr18

35246921

35246928

8mer-1a

35246908

35246928

148

-12.91

ADediting_286380

chr11_79422188_-

ENSG00000186812.13

ENST00000585800.1

ZNF397-204

hsa-miR-5579-3p

chr18

35243723

35243730

8mer-1a

35243709

35243730

140

-9.88

ADediting_286380

chr11_79422188_-

ENSG00000186812.13

ENST00000591206.5

ZNF397-209

hsa-miR-5579-3p

chr18

35243723

35243730

8mer-1a

35243709

35243730

140

-9.88

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZNF397

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000330501.12	protein_coding

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_687071	ENST00000330501.12	chr18_35245645_+	1096	-1793.50	-1793.50	-1894.80
ADediting_687072	ENST00000330501.12	chr18_35245690_+	1141	-1793.40	-1793.50	-1894.80
ADediting_687073	ENST00000330501.12	chr18_35245777_+	1228	-1793.50	-1793.50	-1894.80
ADediting_1550640	ENST00000330501.12	chr18_35245805_+	1256	-1793.50	-1793.50	-1894.80
ADediting_1550641	ENST00000330501.12	chr18_35245813_+	1264	-1793.50	-1793.50	-1894.80
ADediting_1550642	ENST00000330501.12	chr18_35245814_+	1265	-1793.90	-1793.50	-1894.80
ADediting_1550643	ENST00000330501.12	chr18_35245819_+	1270	-1794.20	-1793.50	-1894.80
ADediting_687074	ENST00000330501.12	chr18_35245820_+	1271	-1794.30	-1793.50	-1894.80
ADediting_1629612	ENST00000330501.12	chr18_35245861_+	1312	-1791.70	-1793.50	-1894.80
ADediting_687075	ENST00000330501.12	chr18_35245868_+	1319	-1793.20	-1793.50	-1894.80
ADediting_687076	ENST00000330501.12	chr18_35245869_+	1320	-1793.60	-1793.50	-1894.80
ADediting_1550644	ENST00000330501.12	chr18_35245889_+	1340	-1793.50	-1793.50	-1894.80
ADediting_687077	ENST00000330501.12	chr18_35245890_+	1341	-1793.50	-1793.50	-1894.80
ADediting_687078	ENST00000330501.12	chr18_35245895_+	1346	-1793.90	-1793.50	-1894.80
ADediting_687079	ENST00000330501.12	chr18_35245903_+	1354	-1793.90	-1793.50	-1894.80
ADediting_1550645	ENST00000330501.12	chr18_35245904_+	1355	-1793.50	-1793.50	-1894.80
ADediting_687080	ENST00000330501.12	chr18_35245908_+	1359	-1795.80	-1793.50	-1894.80
ADediting_687081	ENST00000330501.12	chr18_35245917_+	1368	-1796.40	-1793.50	-1894.80
ADediting_687082	ENST00000330501.12	chr18_35245924_+	1375	-1796.10	-1793.50	-1894.80
ADediting_687083	ENST00000330501.12	chr18_35245928_+	1379	-1793.50	-1793.50	-1894.80
ADediting_1550646	ENST00000330501.12	chr18_35245936_+	1387	-1794.50	-1793.50	-1894.80
ADediting_687084	ENST00000330501.12	chr18_35245938_+	1389	-1794.00	-1793.50	-1894.80
ADediting_687085	ENST00000330501.12	chr18_35245945_+	1396	-1793.50	-1793.50	-1894.80
ADediting_1550647	ENST00000330501.12	chr18_35245952_+	1403	-1793.50	-1793.50	-1894.80
ADediting_1550648	ENST00000330501.12	chr18_35245965_+	1416	-1792.80	-1793.50	-1894.80
ADediting_687086	ENST00000330501.12	chr18_35245979_+	1430	-1795.80	-1793.50	-1894.80
ADediting_687087	ENST00000330501.12	chr18_35245987_+	1438	-1794.40	-1793.50	-1894.80
ADediting_687088	ENST00000330501.12	chr18_35245988_+	1439	-1793.50	-1793.50	-1894.80
ADediting_687089	ENST00000330501.12	chr18_35246001_+	1452	-1795.40	-1793.50	-1894.80
ADediting_1550649	ENST00000330501.12	chr18_35246019_+	1470	-1793.40	-1793.50	-1894.80
ADediting_687090	ENST00000330501.12	chr18_35246036_+	1487	-1792.80	-1793.50	-1894.80
ADediting_1550650	ENST00000330501.12	chr18_35246041_+	1492	-1794.70	-1793.50	-1894.80
ADediting_687091	ENST00000330501.12	chr18_35246047_+	1498	-1793.20	-1793.50	-1894.80
ADediting_687092	ENST00000330501.12	chr18_35246063_+	1514	-1793.50	-1793.50	-1894.80
ADediting_1550651	ENST00000330501.12	chr18_35246067_+	1518	-1793.90	-1793.50	-1894.80
ADediting_687093	ENST00000330501.12	chr18_35246071_+	1522	-1797.10	-1793.50	-1894.80
ADediting_687094	ENST00000330501.12	chr18_35246104_+	1555	-1794.30	-1793.50	-1894.80
ADediting_687095	ENST00000330501.12	chr18_35246110_+	1561	-1793.50	-1793.50	-1894.80
ADediting_687096	ENST00000330501.12	chr18_35246113_+	1564	-1794.10	-1793.50	-1894.80
ADediting_687097	ENST00000330501.12	chr18_35246131_+	1582	-1793.20	-1793.50	-1894.80
ADediting_687098	ENST00000330501.12	chr18_35246147_+	1598	-1793.50	-1793.50	-1894.80
ADediting_687099	ENST00000330501.12	chr18_35246170_+	1621	-1793.80	-1793.50	-1894.80
ADediting_687108	ENST00000330501.12	chr18_35247714_+	3165	-1792.80	-1793.50	-1894.80
ADediting_687109	ENST00000330501.12	chr18_35247727_+	3178	-1799.70	-1793.50	-1894.80
ADediting_687110	ENST00000330501.12	chr18_35247732_+	3183	-1793.80	-1793.50	-1894.80
ADediting_687111	ENST00000330501.12	chr18_35247735_+	3186	-1793.00	-1793.50	-1894.80
ADediting_687112	ENST00000330501.12	chr18_35247745_+	3196	-1793.10	-1793.50	-1894.80
ADediting_687113	ENST00000330501.12	chr18_35247750_+	3201	-1792.90	-1793.50	-1894.80
ADediting_687114	ENST00000330501.12	chr18_35247751_+	3202	-1793.50	-1793.50	-1894.80
ADediting_687115	ENST00000330501.12	chr18_35247752_+	3203	-1795.80	-1793.50	-1894.80
ADediting_687116	ENST00000330501.12	chr18_35247770_+	3221	-1793.40	-1793.50	-1894.80
ADediting_687117	ENST00000330501.12	chr18_35247771_+	3222	-1793.50	-1793.50	-1894.80
ADediting_687118	ENST00000330501.12	chr18_35247788_+	3239	-1792.80	-1793.50	-1894.80
ADediting_687119	ENST00000330501.12	chr18_35247800_+	3251	-1793.20	-1793.50	-1894.80
ADediting_687120	ENST00000330501.12	chr18_35247810_+	3261	-1793.50	-1793.50	-1894.80
ADediting_687121	ENST00000330501.12	chr18_35247812_+	3263	-1792.80	-1793.50	-1894.80
ADediting_687122	ENST00000330501.12	chr18_35247820_+	3271	-1798.60	-1793.50	-1894.80
ADediting_687123	ENST00000330501.12	chr18_35247823_+	3274	-1793.10	-1793.50	-1894.80
ADediting_687124	ENST00000330501.12	chr18_35247844_+	3295	-1793.50	-1793.50	-1894.80
ADediting_687125	ENST00000330501.12	chr18_35247850_+	3301	-1793.20	-1793.50	-1894.80
ADediting_687126	ENST00000330501.12	chr18_35247853_+	3304	-1793.60	-1793.50	-1894.80
ADediting_687127	ENST00000330501.12	chr18_35247854_+	3305	-1798.50	-1793.50	-1894.80
ADediting_687128	ENST00000330501.12	chr18_35247855_+	3306	-1793.50	-1793.50	-1894.80
ADediting_687129	ENST00000330501.12	chr18_35247859_+	3310	-1799.70	-1793.50	-1894.80
ADediting_687130	ENST00000330501.12	chr18_35247870_+	3321	-1793.10	-1793.50	-1894.80
ADediting_687131	ENST00000330501.12	chr18_35247879_+	3330	-1792.80	-1793.50	-1894.80
ADediting_687132	ENST00000330501.12	chr18_35247892_+	3343	-1790.50	-1793.50	-1894.80
ADediting_687133	ENST00000330501.12	chr18_35247904_+	3355	-1792.80	-1793.50	-1894.80
ADediting_687134	ENST00000330501.12	chr18_35247909_+	3360	-1792.90	-1793.50	-1894.80
ADediting_687135	ENST00000330501.12	chr18_35247930_+	3381	-1793.20	-1793.50	-1894.80
ADediting_687136	ENST00000330501.12	chr18_35247931_+	3382	-1793.60	-1793.50	-1894.80
ADediting_687137	ENST00000330501.12	chr18_35247932_+	3383	-1793.20	-1793.50	-1894.80
ADediting_687138	ENST00000330501.12	chr18_35247944_+	3395	-1793.50	-1793.50	-1894.80
ADediting_1550652	ENST00000330501.12	chr18_35247946_+	3397	-1792.80	-1793.50	-1894.80
ADediting_1629613	ENST00000330501.12	chr18_35248558_+	4009	-1793.50	-1793.50	-1894.80
ADediting_687139	ENST00000330501.12	chr18_35248577_+	4028	-1794.10	-1793.50	-1894.80
ADediting_687140	ENST00000330501.12	chr18_35248579_+	4030	-1793.50	-1793.50	-1894.80
ADediting_687141	ENST00000330501.12	chr18_35248583_+	4034	-1793.50	-1793.50	-1894.80
ADediting_687142	ENST00000330501.12	chr18_35248591_+	4042	-1792.80	-1793.50	-1894.80
ADediting_687143	ENST00000330501.12	chr18_35248594_+	4045	-1795.10	-1793.50	-1894.80
ADediting_687144	ENST00000330501.12	chr18_35248602_+	4053	-1792.60	-1793.50	-1894.80
ADediting_687145	ENST00000330501.12	chr18_35248607_+	4058	-1796.10	-1793.50	-1894.80
ADediting_687146	ENST00000330501.12	chr18_35248626_+	4077	-1793.90	-1793.50	-1894.80
ADediting_1550653	ENST00000330501.12	chr18_35248631_+	4082	-1792.20	-1793.50	-1894.80
ADediting_687147	ENST00000330501.12	chr18_35248639_+	4090	-1793.20	-1793.50	-1894.80
ADediting_687148	ENST00000330501.12	chr18_35248640_+	4091	-1793.20	-1793.50	-1894.80
ADediting_687149	ENST00000330501.12	chr18_35248645_+	4096	-1792.50	-1793.50	-1894.80
ADediting_687150	ENST00000330501.12	chr18_35248659_+	4110	-1792.90	-1793.50	-1894.80
ADediting_687151	ENST00000330501.12	chr18_35248670_+	4121	-1795.90	-1793.50	-1894.80
ADediting_687152	ENST00000330501.12	chr18_35248682_+	4133	-1793.50	-1793.50	-1894.80
ADediting_1629614	ENST00000330501.12	chr18_35248689_+	4140	-1793.50	-1793.50	-1894.80
ADediting_687153	ENST00000330501.12	chr18_35248692_+	4143	-1793.50	-1793.50	-1894.80
ADediting_687154	ENST00000330501.12	chr18_35248699_+	4150	-1793.10	-1793.50	-1894.80
ADediting_687155	ENST00000330501.12	chr18_35248708_+	4159	-1792.40	-1793.50	-1894.80
ADediting_687156	ENST00000330501.12	chr18_35248721_+	4172	-1793.50	-1793.50	-1894.80
ADediting_687157	ENST00000330501.12	chr18_35248727_+	4178	-1793.20	-1793.50	-1894.80
ADediting_687158	ENST00000330501.12	chr18_35248728_+	4179	-1793.80	-1793.50	-1894.80
ADediting_687159	ENST00000330501.12	chr18_35248738_+	4189	-1794.10	-1793.50	-1894.80
ADediting_687160	ENST00000330501.12	chr18_35248744_+	4195	-1794.60	-1793.50	-1894.80
ADediting_687161	ENST00000330501.12	chr18_35248749_+	4200	-1795.40	-1793.50	-1894.80
ADediting_687162	ENST00000330501.12	chr18_35248751_+	4202	-1793.20	-1793.50	-1894.80
ADediting_687163	ENST00000330501.12	chr18_35248762_+	4213	-1792.50	-1793.50	-1894.80
ADediting_687164	ENST00000330501.12	chr18_35248771_+	4222	-1793.50	-1793.50	-1894.80
ADediting_687165	ENST00000330501.12	chr18_35248783_+	4234	-1793.90	-1793.50	-1894.80
ADediting_687166	ENST00000330501.12	chr18_35248787_+	4238	-1796.00	-1793.50	-1894.80
ADediting_687167	ENST00000330501.12	chr18_35248792_+	4243	-1794.20	-1793.50	-1894.80
ADediting_687168	ENST00000330501.12	chr18_35248797_+	4248	-1797.40	-1793.50	-1894.80
ADediting_687169	ENST00000330501.12	chr18_35248799_+	4250	-1794.20	-1793.50	-1894.80
ADediting_687170	ENST00000330501.12	chr18_35248852_+	4303	-1793.80	-1793.50	-1894.80
ADediting_687171	ENST00000330501.12	chr18_35249374_+	4825	-1797.30	-1793.50	-1894.80
ADediting_687172	ENST00000330501.12	chr18_35249378_+	4829	-1798.90	-1793.50	-1894.80
ADediting_687173	ENST00000330501.12	chr18_35249396_+	4847	-1793.60	-1793.50	-1894.80
ADediting_687174	ENST00000330501.12	chr18_35249397_+	4848	-1793.50	-1793.50	-1894.80
ADediting_687175	ENST00000330501.12	chr18_35249402_+	4853	-1792.80	-1793.50	-1894.80
ADediting_687176	ENST00000330501.12	chr18_35249413_+	4864	-1800.40	-1793.50	-1894.80
ADediting_687177	ENST00000330501.12	chr18_35249432_+	4883	-1793.10	-1793.50	-1894.80
ADediting_687178	ENST00000330501.12	chr18_35249437_+	4888	-1792.60	-1793.50	-1894.80
ADediting_687179	ENST00000330501.12	chr18_35249442_+	4893	-1798.70	-1793.50	-1894.80
ADediting_687180	ENST00000330501.12	chr18_35249456_+	4907	-1792.80	-1793.50	-1894.80
ADediting_687181	ENST00000330501.12	chr18_35249465_+	4916	-1793.20	-1793.50	-1894.80
ADediting_687182	ENST00000330501.12	chr18_35249474_+	4925	-1793.00	-1793.50	-1894.80
ADediting_687183	ENST00000330501.12	chr18_35249476_+	4927	-1793.50	-1793.50	-1894.80
ADediting_687184	ENST00000330501.12	chr18_35249507_+	4958	-1793.20	-1793.50	-1894.80
ADediting_687185	ENST00000330501.12	chr18_35249522_+	4973	-1798.60	-1793.50	-1894.80
ADediting_687186	ENST00000330501.12	chr18_35249532_+	4983	-1793.10	-1793.50	-1894.80
ADediting_687187	ENST00000330501.12	chr18_35249538_+	4989	-1792.80	-1793.50	-1894.80
ADediting_687188	ENST00000330501.12	chr18_35249542_+	4993	-1793.50	-1793.50	-1894.80
ADediting_687189	ENST00000330501.12	chr18_35249557_+	5008	-1800.70	-1793.50	-1894.80
ADediting_687190	ENST00000330501.12	chr18_35249559_+	5010	-1792.80	-1793.50	-1894.80
ADediting_687191	ENST00000330501.12	chr18_35249565_+	5016	-1793.50	-1793.50	-1894.80
ADediting_687192	ENST00000330501.12	chr18_35249573_+	5024	-1793.00	-1793.50	-1894.80
ADediting_687193	ENST00000330501.12	chr18_35249574_+	5025	-1793.50	-1793.50	-1894.80
ADediting_1550654	ENST00000330501.12	chr18_35249581_+	5032	-1792.60	-1793.50	-1894.80
ADediting_687194	ENST00000330501.12	chr18_35249594_+	5045	-1799.70	-1793.50	-1894.80
ADediting_687195	ENST00000330501.12	chr18_35249598_+	5049	-1792.60	-1793.50	-1894.80
ADediting_687196	ENST00000330501.12	chr18_35249603_+	5054	-1792.70	-1793.50	-1894.80
ADediting_687197	ENST00000330501.12	chr18_35249605_+	5056	-1792.90	-1793.50	-1894.80
ADediting_687198	ENST00000330501.12	chr18_35249610_+	5061	-1800.20	-1793.50	-1894.80

RNA A-to-I editing in lncRNA.

ADeditom_ID

ENST

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ZNF397

Correlation between ADAR gene expression and RNA editing frequency

Tissue	ADeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
CER	ADediting_687072	chr18_35245690_+	0.00905588532488107	0.212439494241985	9.42728993161382e-07	0.387810391061321	0.0144088799540526	0.199445899430149
CER	ADediting_687073	chr18_35245777_+	0.00736261107540076	0.218004950080838	1.00821061468576e-06	0.386848707445918	0.0146961279547264	0.19887696382397
CER	ADediting_687078	chr18_35245895_+	0.00831124434003179	0.214762462698562	5.48266018212496e-08	0.425993914717681	0.0422531588166948	0.166067837868672
CER	ADediting_687081	chr18_35245917_+	0.000158071608148395	0.303697372756498	2.13724871243216e-09	0.464461251390422	0.00240823987819473	0.246015591619322
CER	ADediting_687093	chr18_35246071_+	0.0307427449012901	0.176484214635282	7.57344148994206e-07	0.3909250601855	0.170702262970593	0.112441578743201
CER	ADediting_687108	chr18_35247714_+	7.84624999407073e-07	0.390423831639411	2.08021949846874e-08	0.437991267450592	0.167951839990297	0.113164450660057
CER	ADediting_687109	chr18_35247727_+	1.08468390969388e-10	0.496037630501548	1.66708646281583e-09	0.467219240975141	0.925642830885818	0.0076843866496078
TCX	ADediting_687109	chr18_35247727_+	0.0947236814259586	0.136937797179869	3.61085040071532e-05	0.33053496881282	0.00683083328161008	-0.219988678136186
CER	ADediting_687110	chr18_35247732_+	2.21602000142964e-07	0.40783914637901	9.00937378642026e-06	0.353670815162025	0.335020610650518	-0.0792534875880054
TCX	ADediting_687110	chr18_35247732_+	0.0650024551441064	0.151061223030708	2.30822906339391e-05	0.338194540695001	0.0300299419978656	-0.177232585598211
CER	ADediting_687112	chr18_35247745_+	4.29078348882078e-05	0.327526545219441	3.43249250589765e-06	0.368744298090035	0.377189682947178	0.0726159048098948
CER	ADediting_687114	chr18_35247751_+	5.13520116652379e-05	0.324360032480332	0.000340840359312888	0.288641647848695	0.1839104857508	-0.109085401163527
CER	ADediting_687120	chr18_35247810_+	2.00593618896932e-05	0.340556268706102	4.54541959577584e-07	0.398065665917232	0.234101601305478	0.0977364499729935
CER	ADediting_687130	chr18_35247870_+	0.00201696374634731	0.250182627687564	0.000153523019721037	0.304253620115652	0.546151433722361	0.0496636348559479
CER	ADediting_687133	chr18_35247904_+	5.08343602619241e-06	0.362702000344663	7.65379925581805e-08	0.421753782589495	0.0629376227234902	0.152225608766136
STG	ADediting_687133	chr18_35247904_+	0.223505292274942	0.134223192895935	0.916218997470664	-0.0116522092646991	0.0014766434388215	0.341508113196177
CER	ADediting_687137	chr18_35247932_+	1.41792681379927e-06	0.381917401922819	1.89736639871129e-05	0.341487207232509	0.102315095922066	0.133912399735038
CER	ADediting_687138	chr18_35247944_+	2.40455225355105e-07	0.406743921442173	2.20021391206312e-06	0.375443000105527	0.175244834703328	0.111266367429572
CER	ADediting_687140	chr18_35248579_+	3.49279706548506e-09	0.458935442358029	3.95964066745188e-11	0.506023949399227	1.94336931542886e-06	0.377286344905116
TCX	ADediting_687140	chr18_35248579_+	3.48530393022805e-05	0.331148181226505	0.0231343101330607	0.185383820873527	0.115926427526847	0.128903970241205
STG	ADediting_687140	chr18_35248579_+	0.0062407723483194	0.296110674617526	0.00141525960372482	0.342747163996123	0.831413577047275	-0.0235781543308117
CER	ADediting_687141	chr18_35248583_+	6.69383584731549e-05	0.319622915962336	3.14493824187355e-09	0.460123943448763	0.00407777147653265	0.233212945362606
STG	ADediting_687141	chr18_35248583_+	0.00117615038503914	0.348090120550031	0.000235585026187368	0.391002345045071	0.262169783568466	0.123724516532716
CER	ADediting_687144	chr18_35248602_+	0.0185050075291071	0.19212597885381	6.48911557749394e-06	0.358882808633675	0.00100989603582718	0.265821345904819
DLPFC	ADediting_687145	chr18_35248607_+	1.08758452883374e-13	0.405368731144616	2.52582722915041e-12	0.383889268460019	0.841607201157726	0.011395708857201
CER	ADediting_687145	chr18_35248607_+	8.84204148145729e-09	0.44820978366895	1.24774365245706e-14	0.575966341207003	0.586652941876116	0.0447443894058921
TCX	ADediting_687145	chr18_35248607_+	7.7746172116007e-07	0.390553813669069	1.79913697065295e-21	0.677290087667307	3.76320363367819e-07	-0.400665252180099
CER	ADediting_687147	chr18_35248639_+	4.50738406644061e-05	0.326661979253875	7.4496564441419e-10	0.475996434271067	0.000770719765618174	0.271685162030914
CER	ADediting_687149	chr18_35248645_+	3.57907610902029e-07	0.401352103789017	7.6850707344782e-09	0.449853141572733	0.171564957734616	0.11221662451704
CER	ADediting_687150	chr18_35248659_+	3.7297105211468e-06	0.367476696339403	1.67337782645925e-11	0.514310367897591	0.0201135946884858	0.189633010731353
TCX	ADediting_687150	chr18_35248659_+	0.000619099345784877	0.276344150932865	6.87174262683767e-05	0.319149827100696	0.989847859966216	-0.00104768778384
CER	ADediting_687151	chr18_35248670_+	7.21070059675116e-07	0.391618872506577	1.15537346986476e-06	0.38488813873815	0.00385750641576595	0.23459444576137
CER	ADediting_687155	chr18_35248708_+	0.00205655524499404	0.249729093319622	2.5113355183649e-09	0.462657494090676	0.744230642727607	-0.0268585718322102
CER	ADediting_687156	chr18_35248721_+	0.00267572030847217	0.243507290998644	2.15928254859012e-09	0.464346862894481	0.653112698304352	0.0369937050764224
TCX	ADediting_687156	chr18_35248721_+	0.0154957135164052	0.197342855491289	1.44845266364426e-12	0.536699106036177	6.27705344704714e-05	-0.320779051198123
CER	ADediting_687158	chr18_35248728_+	0.301353573179215	0.0849457590108496	0.000115770204588278	0.309574287058581	0.159245268844971	-0.115512451573502
TCX	ADediting_687158	chr18_35248728_+	0.0330695999860671	0.174139713459926	5.91152430263736e-10	0.478471281262117	0.00197022195571074	-0.250728598337722
CER	ADediting_687161	chr18_35248749_+	0.000644050818846415	0.275509817352121	1.82745416506515e-08	0.439560395037713	0.45038618120088	0.0620867202173989
CER	ADediting_687164	chr18_35248771_+	1.12907697246135e-06	0.385220331336199	9.81394191484509e-09	0.446982058417809	0.271992582872531	0.0902628262029428
PCC	ADediting_687165	chr18_35248783_+	0.000280326543760352	0.260033041479935	7.60774445779464e-06	0.317530499853694	0.0197746361316692	-0.168534285806772
TCX	ADediting_687165	chr18_35248783_+	3.20812468066647e-05	0.33257906813115	1.58583071537917e-22	0.689979132404428	5.47321429260541e-06	-0.361551447417232
CER	ADediting_687167	chr18_35248792_+	0.000119235781222995	0.309022963948397	3.79779052222872e-06	0.36719986988426	0.210557305998053	0.102817138965363
CER	ADediting_687168	chr18_35248797_+	9.57113366449234e-06	0.352699974114791	1.87889114873074e-09	0.465894551186212	0.392543256259322	0.0703133678030151
TCX	ADediting_687168	chr18_35248797_+	0.853310698268063	0.0152231599691596	9.15177451758816e-05	0.313929989587893	0.0356125523546462	-0.171732217383514
CER	ADediting_687169	chr18_35248799_+	0.000287557426216367	0.292044352276929	2.90323145642226e-08	0.433916747303232	0.200452986536886	0.105122469900645
CER	ADediting_687175	chr18_35249402_+	6.8476865657799e-08	0.423174754222459	1.9855452814998e-05	0.340727429629754	0.0622899400635049	0.152597281625228
CER	ADediting_687176	chr18_35249413_+	0.000169473274935848	0.302366009967421	0.00181568171332601	0.252621567815132	0.511045686826847	0.0540740731002266
CER	ADediting_687177	chr18_35249432_+	0.0004629681859167	0.28240194540981	1.33651278606974e-05	0.347282342386358	0.201573702807647	0.104862704995735
DLPFC	ADediting_687179	chr18_35249442_+	0.00037161757034515	0.20091020413859	2.0107407132755e-08	0.311959781708174	0.07275295882564	0.10205981113404
AC	ADediting_687179	chr18_35249442_+	4.79324134968988e-08	0.336794666900051	1.15438451880158e-06	0.301889273121814	8.67291228898209e-05	0.24565550580006
DLPFC	ADediting_687180	chr18_35249456_+	3.28855706725161e-09	0.328017253779929	9.34976016812429e-18	0.461486455825181	0.987390691433421	0.000901252234298934
TCX	ADediting_687180	chr18_35249456_+	0.173604185477305	0.111688191887528	4.24639929084762e-06	0.365485476682078	0.0327402128526988	-0.174462923707089
DLPFC	ADediting_687183	chr18_35249476_+	2.01114862492915e-05	0.239590700749838	5.88768107875767e-12	0.377832558272942	0.426181077402032	0.0453551608068773
CER	ADediting_687185	chr18_35249522_+	2.0419017842814e-07	0.408932879602379	2.85234217544076e-08	0.434134248180046	0.0123540629701304	0.203832360162602
CER	ADediting_687186	chr18_35249532_+	1.06858497443072e-12	0.539370659959084	1.31766822621088e-14	0.575544101699481	0.00610998861190696	0.222909448802681
CER	ADediting_687187	chr18_35249538_+	9.75298695670766e-06	0.352397216932928	1.12766698254954e-05	0.350051721143723	0.309488701948659	0.0835338459662082
DLPFC	ADediting_687188	chr18_35249542_+	0.000116953646770852	0.217065539266954	1.35052901854882e-08	0.315571558801642	0.260776101717382	0.064063811840622
CER	ADediting_687188	chr18_35249542_+	1.20767893826484e-08	0.444524915390207	5.85536477154522e-09	0.453015036331161	0.0492430027484808	0.160861004869408
CER	ADediting_687190	chr18_35249559_+	1.46021654463408e-05	0.34582913752106	1.74691074631803e-05	0.342863966640092	0.0662142815154755	0.150391857348329
CER	ADediting_687194	chr18_35249594_+	1.07146917049433e-05	0.350879839160246	1.18233023573964e-06	0.38455499675147	0.00136576199534403	0.259113049123849
DLPFC	ADediting_687195	chr18_35249598_+	6.1384791737747e-05	0.225577204922958	4.76592589874226e-08	0.303957713597182	0.0586883272691558	0.107497303667973
CER	ADediting_687196	chr18_35249603_+	0.000133867553151195	0.306848897013608	1.010151602937e-05	0.351831597526318	0.990926292673066	0.000936389885136784
CER	ADediting_687198	chr18_35249610_+	5.36855667519688e-05	0.323571296263275	4.00485218194538e-06	0.366385953717344	0.0424164728671784	0.165938238436791

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	5.36408607953159e-14	0.409989663232271	5.56265320560359e-06	0.254749193590957	2.59235996661393e-44	0.685245564998181
AC	7.44895650923851e-47	0.75234667959809	9.44345229945489e-31	0.644582256890517	1.38911001587053e-30	0.643175249374666
PCC	5.10215932925544e-28	0.687067311821027	6.51188933721251e-24	0.645667063444553	9.57080623366409e-11	0.44646516074891
CER	3.80162356657273e-42	0.845400504765678	1.38846822338563e-22	0.690655212822434	0.00504864043776599	0.227825768054486
TCX	1.11165331810234e-05	0.350283648679456	0.203867147938686	-0.104334350619723	3.98343081256991e-27	0.738603982065679
FP	1.69266179287402e-24	0.669457012836006	6.92714384032309e-20	0.614802532190869	8.82715692444048e-16	0.555178618191956
IFG	4.71274026213553e-05	0.721399609433265	0.00148537714537007	0.601049972809918	4.69489085275896e-05	0.721505583569946
PG	2.97961568549405e-33	0.737946886321888	3.13279077703283e-22	0.63314322380594	0.00875284538486153	0.191727943135622
STG	5.39811474083434e-09	0.58425903501563	1.07398652727921e-06	0.503118495274502	7.16885868719881e-06	0.467969630202952

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Relation with AD stages for ZNF397

Correlation between AD stages and RNA editing frequency

Tissue	ADeditomID	position	P-val	Coeff.
CER	ADediting_687073	chr18_35245777_+	0.000183143584511051	0.352473663899877
CER	ADediting_687081	chr18_35245917_+	0.00028365087695792	0.342629617402214
CER	ADediting_687093	chr18_35246071_+	0.0009506516356689	0.31358664958627
CER	ADediting_687140	chr18_35248579_+	0.000241015830341068	0.346332581089556
CER	ADediting_687147	chr18_35248639_+	5.03985599345253e-06	0.423196377477009
CER	ADediting_687150	chr18_35248659_+	5.99230730916207e-05	0.376250744599847
CER	ADediting_687155	chr18_35248708_+	0.000288903587434815	0.342209589097168
CER	ADediting_687169	chr18_35248799_+	0.000913749652385099	0.314584331604213
CER	ADediting_687186	chr18_35249532_+	0.00107805547214391	0.31039441110566
TCX	ADediting_687140	chr18_35248579_+	7.39855833393154e-05	0.375216164434233
TCX	ADediting_687147	chr18_35248639_+	4.8075392603897e-05	0.384105888518632
TCX	ADediting_687150	chr18_35248659_+	0.00129334120449137	0.30850512604649
IFG	ADediting_687116	chr18_35247770_+	0.0215117307495939	0.457394552631361
IFG	ADediting_687119	chr18_35247800_+	0.0085350878904284	0.514291757299428
IFG	ADediting_687150	chr18_35248659_+	0.0350738940122936	0.423132924471808
IFG	ADediting_687194	chr18_35249594_+	0.0418856779096589	-0.409838642244527
IFG	ADediting_687195	chr18_35249598_+	0.04897706951583	-0.397704204776515

Correlation between AD stages and this gene's expression

Tissue	P-val	Coeff.
CER	6.60002650833259e-05	0.374266492071015
TCX	1.65166492275063e-06	0.446045775838892

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RelatedDrugs for ZNF397

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ZNF397

Diseases associated with this gene.
(DisGeNet 4.0)

Gene

Disease ID

Disease name

# pubmeds

Source

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Gene summary for ZNF397

RNA A-to-I events for ZNF397

RNA editing positional annotations for ZNF397 using Annovar

RNA A-to-I editing events in the alternative splicing sites for ZNF397

Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF397

Protein coding region RNA A-to-I editings for ZNF397

The effects of the RNA editing to the miRNA binding sites for ZNF397

The effects of the RNA editing to the stability of the RNA structures for ZNF397

Relation with ADAR for ZNF397

Relation with AD stages for ZNF397

RelatedDrugs for ZNF397

RelatedDiseases for ZNF397

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene