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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for ATAD3B |
 Gene summary |
| Gene information | Gene symbol | ATAD3B | Gene ID | 83858 |
| Gene name | ATPase family AAA domain containing 3B | |
| Synonyms | AAA-TOB3|TOB3 | |
| Cytomap | 1p36.33 | |
| Type of gene | protein-coding | |
| Description | ATPase family AAA domain-containing protein 3BAAA-ATPase TOB3 | |
| Modification date | 20200320 | |
| UniProtAcc | Q5T9A4, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for ATAD3B |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_15865(1477978, +), ADediting_16171(1482833, +), ADediting_16172(1482895, +), ADediting_16173(1482907, +), ADediting_16177(1483031, +), ADediting_16178(1483040, +), ADediting_16179(1483062, +), ADediting_16180(1483072, +), ADediting_16181(1483075, +), ADediting_16182(1483078, +), ADediting_16185(1483108, +), ADediting_16191(1483114, +), ADediting_16193(1483149, +), ADediting_16194(1483150, +), ADediting_16195(1483152, +), ADediting_16196(1483153, +), ADediting_16197(1483156, +), ADediting_16198(1483182, +), ADediting_16199(1483183, +), ADediting_16212(1483201, +), ADediting_16223(1483216, +), ADediting_16225(1483237, +), ADediting_16226(1483240, +), ADediting_16227(1483266, +), ADediting_16228(1483291, +), ADediting_16229(1483296, +), ADediting_16230(1483305, +), ADediting_16231(1483307, +), ADediting_16232(1483320, +), ADediting_16233(1483323, +), ADediting_16234(1483346, +), ADediting_16235(1483347, +), ADediting_16236(1483377, +), ADediting_16237(1483392, +), ADediting_16238(1483408, +), ADediting_16243(1483418, +), ADediting_16253(1483517, +), ADediting_16254(1483525, +), ADediting_16255(1483533, +), ADediting_16256(1483538, +), ADediting_16257(1483539, +), ADediting_16261(1483552, +), ADediting_16267(1483557, +), ADediting_16279(1483562, +), ADediting_16280(1483564, +), ADediting_16281(1483565, +), ADediting_16302(1483586, +), ADediting_16314(1483596, +), ADediting_16316(1483597, +), ADediting_16342(1483601, +), ADediting_16343(1483607, +), ADediting_16344(1483610, +), ADediting_16345(1483611, +), ADediting_16346(1483612, +), ADediting_16347(1483613, +), ADediting_16348(1483614, +), ADediting_16349(1483616, +), ADediting_16350(1483654, +), ADediting_16351(1483680, +), ADediting_16352(1483681, +), ADediting_16353(1483686, +), ADediting_16354(1483690, +), ADediting_16359(1483750, +), ADediting_16360(1483758, +), ADediting_16378(1483986, +), ADediting_16392(1484231, +), ADediting_16393(1484236, +), ADediting_16394(1484245, +), ADediting_16395(1484251, +), ADediting_16396(1484255, +), ADediting_16397(1484261, +), ADediting_16398(1484282, +), ADediting_16399(1484285, +), ADediting_16400(1484298, +), ADediting_16401(1484310, +), ADediting_16402(1484320, +), ADediting_16403(1484322, +), ADediting_16404(1484346, +), ADediting_16405(1484347, +), ADediting_16406(1484357, +), ADediting_16407(1484363, +), ADediting_16408(1484366, +), ADediting_16409(1484368, +), ADediting_16410(1484372, +), ADediting_16411(1484388, +), ADediting_16412(1484393, +), ADediting_16413(1484395, +), ADediting_16414(1484442, +), ADediting_16415(1484443, +), ADediting_16416(1484455, +), ADediting_16417(1484487, +), ADediting_16418(1484491, +), ADediting_16419(1484492, +), ADediting_16420(1484508, +), ADediting_16421(1484511, +), ADediting_16422(1484518, +), ADediting_16423(1484568, +), ADediting_16425(1484601, +), ADediting_16556(1487277, +), ADediting_16560(1488035, +), ADediting_16561(1488055, +), ADediting_16562(1488084, +), ADediting_16563(1488094, +), ADediting_16564(1488116, +), ADediting_16569(1488167, +), ADediting_16587(1488447, +), ADediting_16599(1488549, +), ADediting_16603(1488557, +), ADediting_16605(1488558, +), ADediting_16610(1488575, +), ADediting_16611(1488583, +), ADediting_16617(1488639, +), ADediting_16649(1488960, +), ADediting_16887(1492285, +), ADediting_16912(1493500, +), ADediting_16913(1493506, +), ADediting_16916(1493564, +), ADediting_16917(1493569, +), ADediting_17043(1497650, +), ADediting_17048(1497686, +), ADediting_17049(1497687, +), ADediting_17053(1497735, +), ADediting_17054(1497745, +), ADediting_17055(1497746, +), ADediting_17056(1497755, +), ADediting_17058(1497798, +), ADediting_1514398(1478126, +), ADediting_1514399(1478136, +), ADediting_1514401(1482856, +), ADediting_1514402(1483105, +), ADediting_1514403(1483290, +), ADediting_1514404(1483308, +), ADediting_1514405(1483309, +), ADediting_1514407(1483619, +), ADediting_1514408(1483621, +), ADediting_1514409(1484441, +), ADediting_1514410(1484566, +), ADediting_1514411(1487301, +), ADediting_1514413(1488506, +), ADediting_1514431(1492253, +), ADediting_1514434(1497772, +), |
Top |
RNA editing positional annotations for ATAD3B using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_15865 | chr1_1477978_+ | intronic |
| ADediting_16171 | chr1_1482833_+ | intronic |
| ADediting_16172 | chr1_1482895_+ | intronic |
| ADediting_16173 | chr1_1482907_+ | intronic |
| ADediting_16177 | chr1_1483031_+ | intronic |
| ADediting_16178 | chr1_1483040_+ | intronic |
| ADediting_16179 | chr1_1483062_+ | intronic |
| ADediting_16180 | chr1_1483072_+ | intronic |
| ADediting_16181 | chr1_1483075_+ | intronic |
| ADediting_16182 | chr1_1483078_+ | intronic |
| ADediting_16185 | chr1_1483108_+ | intronic |
| ADediting_16191 | chr1_1483114_+ | intronic |
| ADediting_16193 | chr1_1483149_+ | intronic |
| ADediting_16194 | chr1_1483150_+ | intronic |
| ADediting_16195 | chr1_1483152_+ | intronic |
| ADediting_16196 | chr1_1483153_+ | intronic |
| ADediting_16197 | chr1_1483156_+ | intronic |
| ADediting_16198 | chr1_1483182_+ | intronic |
| ADediting_16199 | chr1_1483183_+ | intronic |
| ADediting_16212 | chr1_1483201_+ | intronic |
| ADediting_16223 | chr1_1483216_+ | intronic |
| ADediting_16225 | chr1_1483237_+ | intronic |
| ADediting_16226 | chr1_1483240_+ | intronic |
| ADediting_16227 | chr1_1483266_+ | intronic |
| ADediting_16228 | chr1_1483291_+ | intronic |
| ADediting_16229 | chr1_1483296_+ | intronic |
| ADediting_16230 | chr1_1483305_+ | intronic |
| ADediting_16231 | chr1_1483307_+ | intronic |
| ADediting_16232 | chr1_1483320_+ | intronic |
| ADediting_16233 | chr1_1483323_+ | intronic |
| ADediting_16234 | chr1_1483346_+ | intronic |
| ADediting_16235 | chr1_1483347_+ | intronic |
| ADediting_16236 | chr1_1483377_+ | intronic |
| ADediting_16237 | chr1_1483392_+ | intronic |
| ADediting_16238 | chr1_1483408_+ | intronic |
| ADediting_16243 | chr1_1483418_+ | intronic |
| ADediting_16253 | chr1_1483517_+ | intronic |
| ADediting_16254 | chr1_1483525_+ | intronic |
| ADediting_16255 | chr1_1483533_+ | intronic |
| ADediting_16256 | chr1_1483538_+ | intronic |
| ADediting_16257 | chr1_1483539_+ | intronic |
| ADediting_16261 | chr1_1483552_+ | intronic |
| ADediting_16267 | chr1_1483557_+ | intronic |
| ADediting_16279 | chr1_1483562_+ | intronic |
| ADediting_16280 | chr1_1483564_+ | intronic |
| ADediting_16281 | chr1_1483565_+ | intronic |
| ADediting_16302 | chr1_1483586_+ | intronic |
| ADediting_16314 | chr1_1483596_+ | intronic |
| ADediting_16316 | chr1_1483597_+ | intronic |
| ADediting_16342 | chr1_1483601_+ | intronic |
| ADediting_16343 | chr1_1483607_+ | intronic |
| ADediting_16344 | chr1_1483610_+ | intronic |
| ADediting_16345 | chr1_1483611_+ | intronic |
| ADediting_16346 | chr1_1483612_+ | intronic |
| ADediting_16347 | chr1_1483613_+ | intronic |
| ADediting_16348 | chr1_1483614_+ | intronic |
| ADediting_16349 | chr1_1483616_+ | intronic |
| ADediting_16350 | chr1_1483654_+ | intronic |
| ADediting_16351 | chr1_1483680_+ | intronic |
| ADediting_16352 | chr1_1483681_+ | intronic |
| ADediting_16353 | chr1_1483686_+ | intronic |
| ADediting_16354 | chr1_1483690_+ | intronic |
| ADediting_16359 | chr1_1483750_+ | intronic |
| ADediting_16360 | chr1_1483758_+ | intronic |
| ADediting_16378 | chr1_1483986_+ | intronic |
| ADediting_16392 | chr1_1484231_+ | intronic |
| ADediting_16393 | chr1_1484236_+ | intronic |
| ADediting_16394 | chr1_1484245_+ | intronic |
| ADediting_16395 | chr1_1484251_+ | intronic |
| ADediting_16396 | chr1_1484255_+ | intronic |
| ADediting_16397 | chr1_1484261_+ | intronic |
| ADediting_16398 | chr1_1484282_+ | intronic |
| ADediting_16399 | chr1_1484285_+ | intronic |
| ADediting_16400 | chr1_1484298_+ | intronic |
| ADediting_16401 | chr1_1484310_+ | intronic |
| ADediting_16402 | chr1_1484320_+ | intronic |
| ADediting_16403 | chr1_1484322_+ | intronic |
| ADediting_16404 | chr1_1484346_+ | intronic |
| ADediting_16405 | chr1_1484347_+ | intronic |
| ADediting_16406 | chr1_1484357_+ | intronic |
| ADediting_16407 | chr1_1484363_+ | intronic |
| ADediting_16408 | chr1_1484366_+ | intronic |
| ADediting_16409 | chr1_1484368_+ | intronic |
| ADediting_16410 | chr1_1484372_+ | intronic |
| ADediting_16411 | chr1_1484388_+ | intronic |
| ADediting_16412 | chr1_1484393_+ | intronic |
| ADediting_16413 | chr1_1484395_+ | intronic |
| ADediting_16414 | chr1_1484442_+ | intronic |
| ADediting_16415 | chr1_1484443_+ | intronic |
| ADediting_16416 | chr1_1484455_+ | intronic |
| ADediting_16417 | chr1_1484487_+ | intronic |
| ADediting_16418 | chr1_1484491_+ | intronic |
| ADediting_16419 | chr1_1484492_+ | intronic |
| ADediting_16420 | chr1_1484508_+ | intronic |
| ADediting_16421 | chr1_1484511_+ | intronic |
| ADediting_16422 | chr1_1484518_+ | intronic |
| ADediting_16423 | chr1_1484568_+ | intronic |
| ADediting_16425 | chr1_1484601_+ | intronic |
| ADediting_16556 | chr1_1487277_+ | intronic |
| ADediting_16560 | chr1_1488035_+ | intronic |
| ADediting_16561 | chr1_1488055_+ | intronic |
| ADediting_16562 | chr1_1488084_+ | intronic |
| ADediting_16563 | chr1_1488094_+ | intronic |
| ADediting_16564 | chr1_1488116_+ | intronic |
| ADediting_16569 | chr1_1488167_+ | intronic |
| ADediting_16587 | chr1_1488447_+ | intronic |
| ADediting_16599 | chr1_1488549_+ | intronic |
| ADediting_16603 | chr1_1488557_+ | intronic |
| ADediting_16605 | chr1_1488558_+ | intronic |
| ADediting_16610 | chr1_1488575_+ | intronic |
| ADediting_16611 | chr1_1488583_+ | intronic |
| ADediting_16617 | chr1_1488639_+ | intronic |
| ADediting_16649 | chr1_1488960_+ | intronic |
| ADediting_16887 | chr1_1492285_+ | intronic |
| ADediting_16912 | chr1_1493500_+ | intronic |
| ADediting_16913 | chr1_1493506_+ | intronic |
| ADediting_16916 | chr1_1493564_+ | intronic |
| ADediting_16917 | chr1_1493569_+ | intronic |
| ADediting_17043 | chr1_1497650_+ | UTR3 |
| ADediting_17048 | chr1_1497686_+ | UTR3 |
| ADediting_17049 | chr1_1497687_+ | UTR3 |
| ADediting_17053 | chr1_1497735_+ | UTR3 |
| ADediting_17054 | chr1_1497745_+ | UTR3 |
| ADediting_17055 | chr1_1497746_+ | UTR3 |
| ADediting_17056 | chr1_1497755_+ | UTR3 |
| ADediting_17058 | chr1_1497798_+ | UTR3 |
| ADediting_1514398 | chr1_1478126_+ | intronic |
| ADediting_1514399 | chr1_1478136_+ | intronic |
| ADediting_1514401 | chr1_1482856_+ | intronic |
| ADediting_1514402 | chr1_1483105_+ | intronic |
| ADediting_1514403 | chr1_1483290_+ | intronic |
| ADediting_1514404 | chr1_1483308_+ | intronic |
| ADediting_1514405 | chr1_1483309_+ | intronic |
| ADediting_1514407 | chr1_1483619_+ | intronic |
| ADediting_1514408 | chr1_1483621_+ | intronic |
| ADediting_1514409 | chr1_1484441_+ | intronic |
| ADediting_1514410 | chr1_1484566_+ | intronic |
| ADediting_1514411 | chr1_1487301_+ | intronic |
| ADediting_1514413 | chr1_1488506_+ | intronic |
| ADediting_1514431 | chr1_1492253_+ | intronic |
| ADediting_1514434 | chr1_1497772_+ | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_15865 | chr1_1477978_+ | SINE | Alu | Name=AluSp |
| ADediting_16171 | chr1_1482833_+ | SINE | Alu | Name=AluJb |
| ADediting_16172 | chr1_1482895_+ | SINE | Alu | Name=AluJb |
| ADediting_16173 | chr1_1482907_+ | SINE | Alu | Name=AluJb |
| ADediting_16177 | chr1_1483031_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16178 | chr1_1483040_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16179 | chr1_1483062_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16180 | chr1_1483072_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16181 | chr1_1483075_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16182 | chr1_1483078_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16185 | chr1_1483108_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16191 | chr1_1483114_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16193 | chr1_1483149_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16194 | chr1_1483150_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16195 | chr1_1483152_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16196 | chr1_1483153_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16197 | chr1_1483156_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16198 | chr1_1483182_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16199 | chr1_1483183_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16212 | chr1_1483201_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16223 | chr1_1483216_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16225 | chr1_1483237_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16226 | chr1_1483240_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16227 | chr1_1483266_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16228 | chr1_1483291_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16229 | chr1_1483296_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16230 | chr1_1483305_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16231 | chr1_1483307_+ | SINE | Alu | Name=AluSc8 |
| ADediting_16232 | chr1_1483320_+ | SINE | Alu | Name=AluSp |
| ADediting_16233 | chr1_1483323_+ | SINE | Alu | Name=AluSp |
| ADediting_16234 | chr1_1483346_+ | SINE | Alu | Name=AluSp |
| ADediting_16235 | chr1_1483347_+ | SINE | Alu | Name=AluSp |
| ADediting_16236 | chr1_1483377_+ | SINE | Alu | Name=AluSp |
| ADediting_16237 | chr1_1483392_+ | SINE | Alu | Name=AluSp |
| ADediting_16238 | chr1_1483408_+ | SINE | Alu | Name=AluSp |
| ADediting_16243 | chr1_1483418_+ | SINE | Alu | Name=AluSp |
| ADediting_16253 | chr1_1483517_+ | SINE | Alu | Name=AluSz |
| ADediting_16254 | chr1_1483525_+ | SINE | Alu | Name=AluSz |
| ADediting_16255 | chr1_1483533_+ | SINE | Alu | Name=AluSz |
| ADediting_16256 | chr1_1483538_+ | SINE | Alu | Name=AluSz |
| ADediting_16257 | chr1_1483539_+ | SINE | Alu | Name=AluSz |
| ADediting_16261 | chr1_1483552_+ | SINE | Alu | Name=AluSz |
| ADediting_16267 | chr1_1483557_+ | SINE | Alu | Name=AluSz |
| ADediting_16279 | chr1_1483562_+ | SINE | Alu | Name=AluSz |
| ADediting_16280 | chr1_1483564_+ | SINE | Alu | Name=AluSz |
| ADediting_16281 | chr1_1483565_+ | SINE | Alu | Name=AluSz |
| ADediting_16302 | chr1_1483586_+ | SINE | Alu | Name=AluSz |
| ADediting_16314 | chr1_1483596_+ | SINE | Alu | Name=AluSz |
| ADediting_16316 | chr1_1483597_+ | SINE | Alu | Name=AluSz |
| ADediting_16342 | chr1_1483601_+ | SINE | Alu | Name=AluSz |
| ADediting_16343 | chr1_1483607_+ | SINE | Alu | Name=AluSz |
| ADediting_16344 | chr1_1483610_+ | SINE | Alu | Name=AluSz |
| ADediting_16345 | chr1_1483611_+ | SINE | Alu | Name=AluSz |
| ADediting_16346 | chr1_1483612_+ | SINE | Alu | Name=AluSz |
| ADediting_16347 | chr1_1483613_+ | SINE | Alu | Name=AluSz |
| ADediting_16348 | chr1_1483614_+ | SINE | Alu | Name=AluSz |
| ADediting_16349 | chr1_1483616_+ | SINE | Alu | Name=AluSz |
| ADediting_16350 | chr1_1483654_+ | SINE | Alu | Name=AluSz |
| ADediting_16351 | chr1_1483680_+ | SINE | Alu | Name=AluSz |
| ADediting_16352 | chr1_1483681_+ | SINE | Alu | Name=AluSz |
| ADediting_16353 | chr1_1483686_+ | SINE | Alu | Name=AluSz |
| ADediting_16354 | chr1_1483690_+ | SINE | Alu | Name=AluSz |
| ADediting_16359 | chr1_1483750_+ | SINE | Alu | Name=AluSz |
| ADediting_16360 | chr1_1483758_+ | SINE | Alu | Name=AluSz |
| ADediting_16392 | chr1_1484231_+ | SINE | Alu | Name=AluY |
| ADediting_16393 | chr1_1484236_+ | SINE | Alu | Name=AluY |
| ADediting_16394 | chr1_1484245_+ | SINE | Alu | Name=AluY |
| ADediting_16395 | chr1_1484251_+ | SINE | Alu | Name=AluY |
| ADediting_16396 | chr1_1484255_+ | SINE | Alu | Name=AluY |
| ADediting_16397 | chr1_1484261_+ | SINE | Alu | Name=AluY |
| ADediting_16398 | chr1_1484282_+ | SINE | Alu | Name=AluY |
| ADediting_16399 | chr1_1484285_+ | SINE | Alu | Name=AluY |
| ADediting_16400 | chr1_1484298_+ | SINE | Alu | Name=AluY |
| ADediting_16401 | chr1_1484310_+ | SINE | Alu | Name=AluY |
| ADediting_16402 | chr1_1484320_+ | SINE | Alu | Name=AluY |
| ADediting_16403 | chr1_1484322_+ | SINE | Alu | Name=AluY |
| ADediting_16404 | chr1_1484346_+ | SINE | Alu | Name=AluY |
| ADediting_16405 | chr1_1484347_+ | SINE | Alu | Name=AluY |
| ADediting_16406 | chr1_1484357_+ | SINE | Alu | Name=AluY |
| ADediting_16407 | chr1_1484363_+ | SINE | Alu | Name=AluY |
| ADediting_16408 | chr1_1484366_+ | SINE | Alu | Name=AluY |
| ADediting_16409 | chr1_1484368_+ | SINE | Alu | Name=AluY |
| ADediting_16410 | chr1_1484372_+ | SINE | Alu | Name=AluY |
| ADediting_16411 | chr1_1484388_+ | SINE | Alu | Name=AluY |
| ADediting_16412 | chr1_1484393_+ | SINE | Alu | Name=AluY |
| ADediting_16413 | chr1_1484395_+ | SINE | Alu | Name=AluY |
| ADediting_16414 | chr1_1484442_+ | SINE | Alu | Name=AluY |
| ADediting_16415 | chr1_1484443_+ | SINE | Alu | Name=AluY |
| ADediting_16416 | chr1_1484455_+ | SINE | Alu | Name=AluY |
| ADediting_16417 | chr1_1484487_+ | SINE | Alu | Name=AluSp |
| ADediting_16418 | chr1_1484491_+ | SINE | Alu | Name=AluSp |
| ADediting_16419 | chr1_1484492_+ | SINE | Alu | Name=AluSp |
| ADediting_16420 | chr1_1484508_+ | SINE | Alu | Name=AluSp |
| ADediting_16421 | chr1_1484511_+ | SINE | Alu | Name=AluSp |
| ADediting_16422 | chr1_1484518_+ | SINE | Alu | Name=AluSp |
| ADediting_16423 | chr1_1484568_+ | SINE | Alu | Name=AluSp |
| ADediting_16425 | chr1_1484601_+ | SINE | Alu | Name=AluSp |
| ADediting_16556 | chr1_1487277_+ | SINE | Alu | Name=AluY |
| ADediting_16560 | chr1_1488035_+ | SINE | Alu | Name=AluSz |
| ADediting_16561 | chr1_1488055_+ | SINE | Alu | Name=AluSz |
| ADediting_16562 | chr1_1488084_+ | SINE | Alu | Name=AluSz |
| ADediting_16563 | chr1_1488094_+ | SINE | Alu | Name=AluSz |
| ADediting_16564 | chr1_1488116_+ | SINE | Alu | Name=AluSz |
| ADediting_16569 | chr1_1488167_+ | SINE | Alu | Name=AluSz |
| ADediting_16587 | chr1_1488447_+ | SINE | Alu | Name=AluSz |
| ADediting_16599 | chr1_1488549_+ | SINE | Alu | Name=AluSg |
| ADediting_16603 | chr1_1488557_+ | SINE | Alu | Name=AluSg |
| ADediting_16605 | chr1_1488558_+ | SINE | Alu | Name=AluSg |
| ADediting_16610 | chr1_1488575_+ | SINE | Alu | Name=AluSg |
| ADediting_16611 | chr1_1488583_+ | SINE | Alu | Name=AluSg |
| ADediting_16617 | chr1_1488639_+ | SINE | Alu | Name=AluSg |
| ADediting_16649 | chr1_1488960_+ | SINE | Alu | Name=AluSx |
| ADediting_16887 | chr1_1492285_+ | SINE | Alu | Name=AluSx1 |
| ADediting_16912 | chr1_1493500_+ | SINE | Alu | Name=AluSx |
| ADediting_16913 | chr1_1493506_+ | SINE | Alu | Name=AluSx |
| ADediting_16916 | chr1_1493564_+ | SINE | Alu | Name=AluSx |
| ADediting_16917 | chr1_1493569_+ | SINE | Alu | Name=AluSx |
| ADediting_17043 | chr1_1497650_+ | SINE | Alu | Name=AluSc8 |
| ADediting_17048 | chr1_1497686_+ | SINE | Alu | Name=AluSc8 |
| ADediting_17049 | chr1_1497687_+ | SINE | Alu | Name=AluSc8 |
| ADediting_17053 | chr1_1497735_+ | SINE | Alu | Name=AluSc8 |
| ADediting_17054 | chr1_1497745_+ | SINE | Alu | Name=AluSc8 |
| ADediting_17055 | chr1_1497746_+ | SINE | Alu | Name=AluSc8 |
| ADediting_17056 | chr1_1497755_+ | SINE | Alu | Name=AluSc8 |
| ADediting_17058 | chr1_1497798_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1514398 | chr1_1478126_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1514399 | chr1_1478136_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1514401 | chr1_1482856_+ | SINE | Alu | Name=AluJb |
| ADediting_1514402 | chr1_1483105_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1514403 | chr1_1483290_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1514404 | chr1_1483308_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1514405 | chr1_1483309_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1514407 | chr1_1483619_+ | SINE | Alu | Name=AluSz |
| ADediting_1514408 | chr1_1483621_+ | SINE | Alu | Name=AluSz |
| ADediting_1514409 | chr1_1484441_+ | SINE | Alu | Name=AluY |
| ADediting_1514410 | chr1_1484566_+ | SINE | Alu | Name=AluSp |
| ADediting_1514411 | chr1_1487301_+ | SINE | Alu | Name=AluY |
| ADediting_1514413 | chr1_1488506_+ | SINE | Alu | Name=AluSg |
| ADediting_1514431 | chr1_1492253_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1514434 | chr1_1497772_+ | SINE | Alu | Name=AluSc8 |
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RNA A-to-I editing events in the alternative splicing sites for ATAD3B |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATAD3B |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for ATAD3B |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for ATAD3B |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_17048 | chr1_1497686_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-6788-3p | chr1 | 1497680 | 1497687 | 8mer-1a | 1497666 | 1497687 | 142 | -16.41 |
| ADediting_17049 | chr1_1497687_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-152-5p | chr1 | 1497684 | 1497690 | 7mer-m8 | 1497669 | 1497691 | 144 | -15.79 |
| ADediting_17049 | chr1_1497687_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-4727-5p | chr1 | 1497681 | 1497688 | 8mer-1a | 1497668 | 1497688 | 150 | -15.65 |
| ADediting_17049 | chr1_1497687_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-6738-3p | chr1 | 1497682 | 1497688 | 7mer-m8 | 1497667 | 1497689 | 144 | -13.85 |
| ADediting_17049 | chr1_1497687_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-6817-5p | chr1 | 1497681 | 1497687 | 7mer-1a | 1497665 | 1497687 | 142 | -27.71 |
| ADediting_17054 | chr1_1497745_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-27a-3p | chr1 | 1497739 | 1497745 | 7mer-m8 | 1497726 | 1497746 | 151 | -18.19 |
| ADediting_17054 | chr1_1497745_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-27b-3p | chr1 | 1497739 | 1497745 | 7mer-m8 | 1497726 | 1497746 | 147 | -13.5 |
| ADediting_17054 | chr1_1497745_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-638 | chr1 | 1497744 | 1497750 | 7mer-1a | 1497726 | 1497750 | 143 | -25.17 |
| ADediting_17054 | chr1_1497745_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-9985 | chr1 | 1497739 | 1497745 | 7mer-m8 | 1497728 | 1497746 | 148 | -14.97 |
| ADediting_17056 | chr1_1497755_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-1207-3p | chr1 | 1497748 | 1497754 | 7mer-m8 | 1497738 | 1497755 | 140 | -12.56 |
| ADediting_17056 | chr1_1497755_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-646 | chr1 | 1497750 | 1497756 | 7mer-m8 | 1497739 | 1497757 | 145 | -13.8 |
| ADediting_17058 | chr1_1497798_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-6887-3p | chr1 | 1497791 | 1497797 | 7mer-m8 | 1497778 | 1497798 | 143 | -22.34 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1514434 | chr1_1497772_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-1976 | chr1 | 1497769 | 1497776 | 8mer-1a | 1497756 | 1497776 | 149 | -24.39 |
| ADediting_1514434 | chr1_1497772_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-6747-3p | chr1 | 1497767 | 1497774 | 8mer-1a | 1497752 | 1497774 | 149 | -23.68 |
| ADediting_17043 | chr1_1497650_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-433-3p | chr1 | 1497643 | 1497649 | 7mer-m8 | 1497627 | 1497650 | 151 | -16.86 |
| ADediting_17048 | chr1_1497686_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-12121 | chr1 | 1497679 | 1497686 | 8mer-1a | 1497667 | 1497686 | 144 | -19.22 |
| ADediting_17048 | chr1_1497686_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-19a-5p | chr1 | 1497683 | 1497689 | 7mer-m8 | 1497669 | 1497690 | 147 | -12.77 |
| ADediting_17048 | chr1_1497686_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-19b-1-5p | chr1 | 1497683 | 1497689 | 7mer-m8 | 1497667 | 1497690 | 155 | -15.05 |
| ADediting_17048 | chr1_1497686_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-19b-2-5p | chr1 | 1497683 | 1497689 | 7mer-m8 | 1497668 | 1497690 | 155 | -12.29 |
| ADediting_17049 | chr1_1497687_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-19a-5p | chr1 | 1497683 | 1497689 | 7mer-m8 | 1497669 | 1497690 | 147 | -12.77 |
| ADediting_17049 | chr1_1497687_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-19b-1-5p | chr1 | 1497683 | 1497689 | 7mer-m8 | 1497667 | 1497690 | 155 | -15.05 |
| ADediting_17049 | chr1_1497687_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-19b-2-5p | chr1 | 1497683 | 1497689 | 7mer-m8 | 1497668 | 1497690 | 155 | -12.29 |
| ADediting_17054 | chr1_1497745_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-10399-5p | chr1 | 1497740 | 1497746 | 7mer-m8 | 1497728 | 1497747 | 149 | -11.06 |
| ADediting_17054 | chr1_1497745_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-6504-3p | chr1 | 1497740 | 1497746 | 7mer-m8 | 1497726 | 1497747 | 152 | -16.55 |
| ADediting_17055 | chr1_1497746_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-10399-5p | chr1 | 1497740 | 1497746 | 7mer-m8 | 1497728 | 1497747 | 149 | -11.06 |
| ADediting_17055 | chr1_1497746_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-5089-5p | chr1 | 1497744 | 1497750 | 7mer-m8 | 1497733 | 1497751 | 147 | -14.22 |
| ADediting_17055 | chr1_1497746_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-6504-3p | chr1 | 1497740 | 1497746 | 7mer-m8 | 1497726 | 1497747 | 152 | -16.55 |
| ADediting_17058 | chr1_1497798_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-4685-3p | chr1 | 1497793 | 1497799 | 7mer-1a | 1497777 | 1497799 | 142 | -25.63 |
| ADediting_17058 | chr1_1497798_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-6800-3p | chr1 | 1497796 | 1497802 | 7mer-m8 | 1497783 | 1497803 | 146 | -19.5 |
| ADediting_17058 | chr1_1497798_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-6867-3p | chr1 | 1497793 | 1497799 | 7mer-m8 | 1497780 | 1497800 | 147 | -24.4 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-337-3p | chr1 | 1497482 | 1497488 | 7mer-m8 | 1497469 | 1497489 | 148 | -11.53 |
| ADediting_286380 | chr11_79422188_- | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-5579-3p | chr1 | 1497572 | 1497578 | 7mer-m8 | 1497555 | 1497579 | 150 | -17.45 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1556067 | chr19_40282625_- | ENSG00000160072.20 | ENST00000308647.8 | ATAD3B-201 | hsa-miR-641 | chr1 | 1495763 | 1495769 | 7mer-m8 | 1495742 | 1495770 | 152 | -23.89 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000160072.20 | ENST00000308647.8 | ATAD3B-201 | hsa-miR-641 | chr1 | 1495763 | 1495769 | 7mer-m8 | 1495742 | 1495770 | 152 | -23.89 |
| ADediting_496066 | chr15_66496985_- | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-4512 | chr1 | 1497352 | 1497359 | 8mer-1a | 1497336 | 1497359 | 150 | -16.35 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-4775 | chr1 | 1497567 | 1497574 | 8mer-1a | 1497553 | 1497574 | 140 | -5.34 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000160072.20 | ENST00000673477.1 | ATAD3B-206 | hsa-miR-4775 | chr1 | 1497713 | 1497719 | 7mer-m8 | 1497698 | 1497720 | 153 | -7.86 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for ATAD3B |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000673477.1 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_17043 | ENST00000673477.1 | chr1_1497650_+ | 3900 | -1974.50 | -1975.40 | -1977.90 |
| ADediting_17048 | ENST00000673477.1 | chr1_1497686_+ | 3936 | -1975.10 | -1975.40 | -1977.90 |
| ADediting_17049 | ENST00000673477.1 | chr1_1497687_+ | 3937 | -1975.10 | -1975.40 | -1977.90 |
| ADediting_17053 | ENST00000673477.1 | chr1_1497735_+ | 3985 | -1978.50 | -1975.40 | -1977.90 |
| ADediting_17054 | ENST00000673477.1 | chr1_1497745_+ | 3995 | -1975.40 | -1975.40 | -1977.90 |
| ADediting_17055 | ENST00000673477.1 | chr1_1497746_+ | 3996 | -1978.30 | -1975.40 | -1977.90 |
| ADediting_17056 | ENST00000673477.1 | chr1_1497755_+ | 4005 | -1975.40 | -1975.40 | -1977.90 |
| ADediting_1514434 | ENST00000673477.1 | chr1_1497772_+ | 4022 | -1974.70 | -1975.40 | -1977.90 |
| ADediting_17058 | ENST00000673477.1 | chr1_1497798_+ | 4048 | -1974.60 | -1975.40 | -1977.90 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for ATAD3B |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_16180 | chr1_1483072_+ | 0.000565569374158884 | 0.278243970784517 | 3.28260396811935e-07 | 0.40253237505908 | 0.0352074991698358 | 0.172105753807155 |
| CER | ADediting_16181 | chr1_1483075_+ | 0.0369000556953352 | 0.170568243136288 | 6.92071455501132e-05 | 0.31902161456005 | 0.184489635102002 | 0.10894235539059 |
| CER | ADediting_16182 | chr1_1483078_+ | 0.000291590591674044 | 0.291767143295819 | 1.78571001558765e-06 | 0.378536320538888 | 0.0357971434597097 | 0.17156317799675 |
| CER | ADediting_16197 | chr1_1483156_+ | 0.000575836148031254 | 0.277867106024182 | 8.09621331566131e-06 | 0.35537837061416 | 0.117390844870795 | 0.128392967089459 |
| TCX | ADediting_16228 | chr1_1483291_+ | 0.0785943956431663 | 0.144068649221238 | 3.67405255155675e-05 | 0.330233812299606 | 0.356345424599921 | -0.0758355404158675 |
| CER | ADediting_16229 | chr1_1483296_+ | 0.00195768617421875 | 0.250877024155298 | 1.54405186232488e-05 | 0.344908961095109 | 0.187164022072731 | 0.108286032997343 |
| TCX | ADediting_16229 | chr1_1483296_+ | 0.182860091655902 | 0.109345685895098 | 3.82540529078124e-06 | 0.367088923010362 | 0.182039219772855 | -0.109549860270252 |
| CER | ADediting_16234 | chr1_1483346_+ | 0.000936892288546351 | 0.267462407122258 | 1.39368956108877e-06 | 0.382168657695873 | 0.0991825812922316 | 0.13513855541428 |
| CER | ADediting_16235 | chr1_1483347_+ | 0.000239759427866956 | 0.295636927638093 | 1.85751564312262e-06 | 0.377954522919482 | 0.031800077408847 | 0.175400836605503 |
| CER | ADediting_16237 | chr1_1483392_+ | 0.00050960890919915 | 0.280416198525369 | 0.00017005211321827 | 0.302300666772281 | 0.375661696131823 | 0.0728481449654643 |
| CER | ADediting_16302 | chr1_1483586_+ | 0.00860457956810417 | 0.213826213933703 | 0.000122794115960213 | 0.30847223146179 | 0.0151496070330227 | 0.197998229140718 |
| CER | ADediting_16345 | chr1_1483611_+ | 0.00170181184671557 | 0.254112576258751 | 3.55898695016029e-05 | 0.330785820438489 | 0.952302694539643 | -0.00492507450347551 |
| DLPFC | ADediting_16351 | chr1_1483680_+ | 7.42775152539596e-09 | 0.320908134890061 | 2.27146151853682e-11 | 0.367902175020837 | 0.0123475076079598 | 0.141960195817685 |
| DLPFC | ADediting_16352 | chr1_1483681_+ | 2.76048611430938e-08 | 0.309048983853243 | 1.36955369139388e-10 | 0.354136080090926 | 0.00416966850708249 | 0.162298336789302 |
| CER | ADediting_16352 | chr1_1483681_+ | 0.000230662389446669 | 0.296395337518766 | 7.22825381725858e-07 | 0.391584540057858 | 0.0196918817262297 | 0.190269411200247 |
| TCX | ADediting_16352 | chr1_1483681_+ | 0.573912632430181 | 0.0462739819476777 | 0.565316900736108 | -0.0473149693845536 | 9.84104298785666e-07 | 0.387195626293415 |
| DLPFC | ADediting_16359 | chr1_1483750_+ | 1.80763996243375e-09 | 0.333124412065441 | 3.21141876369009e-09 | 0.328221629361788 | 0.00169430090533239 | 0.177590701458789 |
| CER | ADediting_16359 | chr1_1483750_+ | 0.00337151458005391 | 0.23791276283695 | 1.44781480518116e-05 | 0.34596947384746 | 0.0659907835419511 | 0.150514552922056 |
| DLPFC | ADediting_16378 | chr1_1483986_+ | 4.76904732990416e-12 | 0.379352336691041 | 8.6714779087509e-18 | 0.461898379986764 | 0.218613464263339 | 0.0700691470808746 |
| DLPFC | ADediting_16397 | chr1_1484261_+ | 2.22967948328391e-11 | 0.368041051734489 | 4.86696806019451e-19 | 0.477248547006827 | 0.0111611002549323 | 0.14395686983679 |
| CER | ADediting_16397 | chr1_1484261_+ | 0.0022691017666867 | 0.247421931412117 | 1.39026494219367e-06 | 0.382204493900585 | 0.0577582003085608 | 0.155290406971913 |
| DLPFC | ADediting_16399 | chr1_1484285_+ | 3.44223301901202e-08 | 0.307002889197453 | 4.19090288452271e-10 | 0.345219415487221 | 0.226718310288032 | 0.0688550322336038 |
| DLPFC | ADediting_16401 | chr1_1484310_+ | 1.70359594051268e-11 | 0.3700466949586 | 1.43419448349696e-14 | 0.418427647725577 | 0.000496880294162819 | 0.196648588100652 |
| DLPFC | ADediting_16402 | chr1_1484320_+ | 4.82210050611163e-10 | 0.344080864541825 | 1.64238656314222e-09 | 0.333933947400798 | 0.00035580448961428 | 0.201540679866784 |
| CER | ADediting_16406 | chr1_1484357_+ | 6.7993997691267e-05 | 0.319340801044415 | 6.79636395712095e-08 | 0.423270573909118 | 0.0206901729169598 | 0.188781303041808 |
| DLPFC | ADediting_16407 | chr1_1484363_+ | 9.63677725850648e-08 | 0.297245942763792 | 4.63742705148044e-09 | 0.32504068379435 | 0.00394653303211651 | 0.163269220189714 |
| CER | ADediting_16407 | chr1_1484363_+ | 0.000115196632993342 | 0.309667016700615 | 6.73764820315028e-06 | 0.358290463877059 | 0.15519621581982 | 0.116637236545724 |
| DLPFC | ADediting_16408 | chr1_1484366_+ | 1.63417449895207e-10 | 0.352746178799777 | 4.16633614909465e-11 | 0.363327447434577 | 0.000220556864493111 | 0.208352444417293 |
| CER | ADediting_16408 | chr1_1484366_+ | 0.000499866907588551 | 0.280816692821275 | 2.43385372994537e-05 | 0.337297879673447 | 0.0667582094793553 | 0.1500946575668 |
| TCX | ADediting_16408 | chr1_1484366_+ | 0.38327322097915 | 0.0716969029181025 | 0.201059802441293 | -0.104981689428692 | 7.91169134042773e-06 | 0.355745451626726 |
| DLPFC | ADediting_16410 | chr1_1484372_+ | 9.4395551448191e-09 | 0.318781208867666 | 3.36039993474381e-10 | 0.347002530047168 | 0.00482836351228909 | 0.159683543326731 |
| CER | ADediting_16410 | chr1_1484372_+ | 0.00119500970717354 | 0.262102445302429 | 6.07986702679371e-05 | 0.321351326380765 | 0.0361076159108789 | 0.171280515104123 |
| DLPFC | ADediting_16411 | chr1_1484388_+ | 5.47654612455947e-09 | 0.323588737276855 | 1.80171009600737e-11 | 0.369630522167458 | 0.000428789327442871 | 0.19882178242328 |
| DLPFC | ADediting_16412 | chr1_1484393_+ | 1.82009220342894e-08 | 0.312868303579738 | 1.04223595601325e-11 | 0.373673404429026 | 0.000140319011808444 | 0.214599576670627 |
| CER | ADediting_16412 | chr1_1484393_+ | 0.00420536339666855 | 0.232443067347496 | 0.000163123226261437 | 0.303096820545779 | 0.0223056340147797 | 0.186499545942797 |
| DLPFC | ADediting_16415 | chr1_1484443_+ | 4.22607428754274e-09 | 0.325848264426387 | 1.07603792178551e-06 | 0.272835318186034 | 0.0138725191049083 | 0.139628531352249 |
| DLPFC | ADediting_16416 | chr1_1484455_+ | 1.49362659660355e-09 | 0.33473333014126 | 8.86089330996224e-11 | 0.35753338004868 | 0.0237577373980133 | 0.128404248980628 |
| CER | ADediting_16416 | chr1_1484455_+ | 0.000147550410181284 | 0.30500780446502 | 6.24260719168467e-06 | 0.359491942787157 | 0.0488272323809531 | 0.1611528908221 |
| DLPFC | ADediting_16420 | chr1_1484508_+ | 7.08682506322568e-14 | 0.408177362925928 | 1.73857898909123e-13 | 0.402261933322538 | 0.00120991769585999 | 0.183007095797527 |
| CER | ADediting_16420 | chr1_1484508_+ | 7.54488776207164e-05 | 0.317457909500402 | 1.95472497292212e-05 | 0.34098930554297 | 0.0479638705437029 | 0.161765661491928 |
| CER | ADediting_16422 | chr1_1484518_+ | 3.93321459752595e-05 | 0.329047755548327 | 2.46948164017393e-06 | 0.37371831764311 | 0.459514033497985 | 0.0608449610967223 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.74721519800969e-15 | 0.428675610222305 | 2.94855479109232e-20 | 0.491484872033841 | 3.98920006069075e-23 | 0.522607357819816 |
| AC | 1.60706185081227e-05 | 0.269107556564092 | 0.000418587426517817 | 0.221467971055968 | 6.81451261108293e-14 | 0.450415282851529 |
| PCC | 0.00184044934272784 | 0.223981667716921 | 0.00705848151483362 | 0.194349719121755 | 1.044796727146e-09 | 0.42338956173428 |
| FP | 2.72240328135304e-14 | 0.53018825885868 | 0.000165487052986882 | 0.278668583474458 | 8.24771140128729e-12 | 0.483370978134591 |
| IFG | 0.000458261384164621 | 0.648204739095093 | 6.9794075201468e-05 | 0.710171715108838 | 0.00904779900938887 | 0.510964904594438 |
| STG | 1.87797110348391e-07 | 0.532277524404431 | 0.00749684221784488 | 0.289802661904045 | 0.000230112276318014 | 0.391587989329959 |
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Relation with AD stages for ATAD3B |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_16179 | chr1_1483062_+ | 0.0015161371742452 | 0.301556845364704 |
| CER | ADediting_16235 | chr1_1483347_+ | 0.000498142104527541 | 0.329460878257873 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for ATAD3B |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ATAD3B |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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