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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for CEP70 |
 Gene summary |
| Gene information | Gene symbol | CEP70 | Gene ID | 80321 |
| Gene name | centrosomal protein 70 | |
| Synonyms | BITE | |
| Cytomap | 3q22.3 | |
| Type of gene | protein-coding | |
| Description | centrosomal protein of 70 kDacentrosomal protein 70kDap10-binding proteintesticular tissue protein Li 36 | |
| Modification date | 20200327 | |
| UniProtAcc | Q8NHQ1, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for CEP70 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1026330(138495765, -), ADediting_1026331(138495766, -), ADediting_1026332(138495769, -), ADediting_1026333(138498371, -), ADediting_1026334(138498395, -), ADediting_1026335(138498405, -), ADediting_1026336(138498410, -), ADediting_1026337(138498414, -), ADediting_1026338(138498434, -), ADediting_1026339(138498435, -), ADediting_1026340(138498443, -), ADediting_1026341(138498444, -), ADediting_1026342(138498449, -), ADediting_1026343(138498489, -), ADediting_1026344(138498499, -), ADediting_1026345(138498502, -), ADediting_1026346(138498506, -), ADediting_1026347(138498509, -), ADediting_1026348(138498511, -), ADediting_1026349(138498512, -), ADediting_1026350(138498513, -), ADediting_1026351(138498514, -), ADediting_1026352(138498515, -), ADediting_1026353(138498518, -), ADediting_1026354(138498529, -), ADediting_1026355(138498539, -), ADediting_1026356(138498549, -), ADediting_1026357(138498606, -), ADediting_1026358(138498607, -), ADediting_1026359(138498620, -), ADediting_1026360(138498710, -), ADediting_1026361(138498785, -), ADediting_1026362(138498791, -), ADediting_1026363(138498803, -), ADediting_1026364(138498804, -), ADediting_1026365(138498850, -), ADediting_1026366(138498864, -), ADediting_1026367(138498881, -), ADediting_1026368(138498884, -), ADediting_1026369(138498902, -), ADediting_1026370(138498906, -), ADediting_1026371(138498908, -), ADediting_1026372(138498959, -), ADediting_1026373(138498960, -), ADediting_1026374(138498963, -), ADediting_1026375(138498964, -), ADediting_1026376(138498970, -), ADediting_1026377(138498994, -), ADediting_1026378(138499032, -), ADediting_1026379(138499671, -), ADediting_1026380(138499678, -), ADediting_1026381(138499680, -), ADediting_1026382(138499693, -), ADediting_1026383(138499715, -), ADediting_1026384(138499719, -), ADediting_1026385(138499720, -), ADediting_1026386(138499733, -), ADediting_1026387(138499734, -), ADediting_1026388(138499740, -), ADediting_1026389(138499745, -), ADediting_1026390(138499764, -), ADediting_1026391(138499765, -), ADediting_1026392(138499781, -), ADediting_1026393(138499783, -), ADediting_1026394(138499975, -), ADediting_1026395(138499985, -), ADediting_1026396(138499990, -), ADediting_1026397(138499991, -), ADediting_1026398(138499999, -), ADediting_1026399(138500003, -), ADediting_1026400(138500004, -), ADediting_1026401(138500009, -), ADediting_1026402(138500028, -), ADediting_1026403(138500045, -), ADediting_1026404(138500053, -), ADediting_1026405(138510351, -), ADediting_1026406(138510357, -), ADediting_1026407(138510389, -), ADediting_1026408(138510402, -), ADediting_1026409(138510411, -), ADediting_1026410(138510419, -), ADediting_1026411(138511068, -), ADediting_1026412(138511069, -), ADediting_1026413(138528121, -), ADediting_1026414(138528133, -), ADediting_1026415(138528147, -), ADediting_1026416(138528303, -), ADediting_1026417(138533025, -), ADediting_1026418(138533037, -), ADediting_1026419(138533038, -), ADediting_1026420(138533060, -), ADediting_1026421(138533075, -), ADediting_1026422(138533083, -), ADediting_1026423(138533097, -), ADediting_1026424(138533114, -), ADediting_1026425(138533117, -), ADediting_1026426(138533123, -), ADediting_1026427(138533132, -), ADediting_1026428(138533153, -), ADediting_1026429(138533159, -), ADediting_1026430(138533169, -), ADediting_1026431(138533218, -), ADediting_1026432(138533219, -), ADediting_1026433(138533228, -), ADediting_1026434(138533258, -), ADediting_1026435(138533820, -), ADediting_1026436(138533842, -), ADediting_1026437(138533847, -), ADediting_1026438(138533853, -), ADediting_1026439(138533863, -), ADediting_1026440(138533874, -), ADediting_1026441(138533881, -), ADediting_1026442(138533882, -), ADediting_1026443(138533917, -), ADediting_1026444(138533923, -), ADediting_1026445(138533989, -), ADediting_1026446(138534021, -), ADediting_1026447(138534048, -), ADediting_1026448(138539216, -), ADediting_1026449(138539251, -), ADediting_1026450(138539260, -), ADediting_1026451(138539265, -), ADediting_1026452(138539293, -), ADediting_1026453(138540260, -), ADediting_1026454(138541759, -), ADediting_1026455(138545981, -), ADediting_1026456(138545995, -), ADediting_1026457(138546057, -), ADediting_1026458(138546077, -), ADediting_1026459(138546088, -), ADediting_1026460(138546715, -), ADediting_1026461(138550658, -), ADediting_1026462(138553254, -), ADediting_1026463(138553393, -), ADediting_1026464(138553428, -), ADediting_1026465(138554834, -), ADediting_1026466(138554841, -), ADediting_1026467(138554843, -), ADediting_1026468(138554844, -), ADediting_1026469(138554853, -), ADediting_1026470(138554859, -), ADediting_1026471(138554862, -), ADediting_1026472(138554863, -), ADediting_1026473(138554864, -), ADediting_1026474(138554871, -), ADediting_1026475(138554873, -), ADediting_1026476(138554874, -), ADediting_1026477(138554877, -), ADediting_1026478(138554878, -), ADediting_1026479(138556720, -), ADediting_1026480(138556736, -), ADediting_1026481(138556737, -), ADediting_1026482(138556746, -), ADediting_1026483(138557491, -), ADediting_1026484(138558202, -), ADediting_1572257(138495589, -), ADediting_1572258(138495751, -), ADediting_1572259(138495770, -), ADediting_1572260(138498367, -), ADediting_1572261(138498390, -), ADediting_1572262(138498401, -), ADediting_1572263(138498530, -), ADediting_1572264(138498898, -), ADediting_1572265(138499771, -), ADediting_1644661(138541837, -), ADediting_1644662(138546087, -), ADediting_1644663(138550501, -), ADediting_1644664(138550528, -), ADediting_1644665(138550590, -), ADediting_1644666(138550595, -), ADediting_1644667(138550605, -), ADediting_1644668(138550635, -), ADediting_1644669(138550636, -), ADediting_1644670(138554805, -), ADediting_1644671(138554807, -), ADediting_1644672(138554831, -), ADediting_1644673(138554842, -), ADediting_1644674(138555528, -), ADediting_1644675(138555542, -), ADediting_1644676(138587745, -), |
Top |
RNA editing positional annotations for CEP70 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1026330 | chr3_138495765_- | intronic |
| ADediting_1026331 | chr3_138495766_- | intronic |
| ADediting_1026332 | chr3_138495769_- | intronic |
| ADediting_1026333 | chr3_138498371_- | intronic |
| ADediting_1026334 | chr3_138498395_- | intronic |
| ADediting_1026335 | chr3_138498405_- | intronic |
| ADediting_1026336 | chr3_138498410_- | intronic |
| ADediting_1026337 | chr3_138498414_- | intronic |
| ADediting_1026338 | chr3_138498434_- | intronic |
| ADediting_1026339 | chr3_138498435_- | intronic |
| ADediting_1026340 | chr3_138498443_- | intronic |
| ADediting_1026341 | chr3_138498444_- | intronic |
| ADediting_1026342 | chr3_138498449_- | intronic |
| ADediting_1026343 | chr3_138498489_- | intronic |
| ADediting_1026344 | chr3_138498499_- | intronic |
| ADediting_1026345 | chr3_138498502_- | intronic |
| ADediting_1026346 | chr3_138498506_- | intronic |
| ADediting_1026347 | chr3_138498509_- | intronic |
| ADediting_1026348 | chr3_138498511_- | intronic |
| ADediting_1026349 | chr3_138498512_- | intronic |
| ADediting_1026350 | chr3_138498513_- | intronic |
| ADediting_1026351 | chr3_138498514_- | intronic |
| ADediting_1026352 | chr3_138498515_- | intronic |
| ADediting_1026353 | chr3_138498518_- | intronic |
| ADediting_1026354 | chr3_138498529_- | intronic |
| ADediting_1026355 | chr3_138498539_- | intronic |
| ADediting_1026356 | chr3_138498549_- | intronic |
| ADediting_1026357 | chr3_138498606_- | intronic |
| ADediting_1026358 | chr3_138498607_- | intronic |
| ADediting_1026359 | chr3_138498620_- | intronic |
| ADediting_1026360 | chr3_138498710_- | intronic |
| ADediting_1026361 | chr3_138498785_- | intronic |
| ADediting_1026362 | chr3_138498791_- | intronic |
| ADediting_1026363 | chr3_138498803_- | intronic |
| ADediting_1026364 | chr3_138498804_- | intronic |
| ADediting_1026365 | chr3_138498850_- | intronic |
| ADediting_1026366 | chr3_138498864_- | intronic |
| ADediting_1026367 | chr3_138498881_- | intronic |
| ADediting_1026368 | chr3_138498884_- | intronic |
| ADediting_1026369 | chr3_138498902_- | intronic |
| ADediting_1026370 | chr3_138498906_- | intronic |
| ADediting_1026371 | chr3_138498908_- | intronic |
| ADediting_1026372 | chr3_138498959_- | intronic |
| ADediting_1026373 | chr3_138498960_- | intronic |
| ADediting_1026374 | chr3_138498963_- | intronic |
| ADediting_1026375 | chr3_138498964_- | intronic |
| ADediting_1026376 | chr3_138498970_- | intronic |
| ADediting_1026377 | chr3_138498994_- | intronic |
| ADediting_1026378 | chr3_138499032_- | intronic |
| ADediting_1026379 | chr3_138499671_- | intronic |
| ADediting_1026380 | chr3_138499678_- | intronic |
| ADediting_1026381 | chr3_138499680_- | intronic |
| ADediting_1026382 | chr3_138499693_- | intronic |
| ADediting_1026383 | chr3_138499715_- | intronic |
| ADediting_1026384 | chr3_138499719_- | intronic |
| ADediting_1026385 | chr3_138499720_- | intronic |
| ADediting_1026386 | chr3_138499733_- | intronic |
| ADediting_1026387 | chr3_138499734_- | intronic |
| ADediting_1026388 | chr3_138499740_- | intronic |
| ADediting_1026389 | chr3_138499745_- | intronic |
| ADediting_1026390 | chr3_138499764_- | intronic |
| ADediting_1026391 | chr3_138499765_- | intronic |
| ADediting_1026392 | chr3_138499781_- | intronic |
| ADediting_1026393 | chr3_138499783_- | intronic |
| ADediting_1026394 | chr3_138499975_- | UTR3 |
| ADediting_1026395 | chr3_138499985_- | UTR3 |
| ADediting_1026396 | chr3_138499990_- | UTR3 |
| ADediting_1026397 | chr3_138499991_- | UTR3 |
| ADediting_1026398 | chr3_138499999_- | UTR3 |
| ADediting_1026399 | chr3_138500003_- | UTR3 |
| ADediting_1026400 | chr3_138500004_- | UTR3 |
| ADediting_1026401 | chr3_138500009_- | UTR3 |
| ADediting_1026402 | chr3_138500028_- | UTR3 |
| ADediting_1026403 | chr3_138500045_- | UTR3 |
| ADediting_1026404 | chr3_138500053_- | UTR3 |
| ADediting_1026405 | chr3_138510351_- | intronic |
| ADediting_1026406 | chr3_138510357_- | intronic |
| ADediting_1026407 | chr3_138510389_- | intronic |
| ADediting_1026408 | chr3_138510402_- | intronic |
| ADediting_1026409 | chr3_138510411_- | intronic |
| ADediting_1026410 | chr3_138510419_- | intronic |
| ADediting_1026411 | chr3_138511068_- | intronic |
| ADediting_1026412 | chr3_138511069_- | intronic |
| ADediting_1026413 | chr3_138528121_- | intronic |
| ADediting_1026414 | chr3_138528133_- | intronic |
| ADediting_1026415 | chr3_138528147_- | intronic |
| ADediting_1026416 | chr3_138528303_- | intronic |
| ADediting_1026417 | chr3_138533025_- | intronic |
| ADediting_1026418 | chr3_138533037_- | intronic |
| ADediting_1026419 | chr3_138533038_- | intronic |
| ADediting_1026420 | chr3_138533060_- | intronic |
| ADediting_1026421 | chr3_138533075_- | intronic |
| ADediting_1026422 | chr3_138533083_- | intronic |
| ADediting_1026423 | chr3_138533097_- | intronic |
| ADediting_1026424 | chr3_138533114_- | intronic |
| ADediting_1026425 | chr3_138533117_- | intronic |
| ADediting_1026426 | chr3_138533123_- | intronic |
| ADediting_1026427 | chr3_138533132_- | intronic |
| ADediting_1026428 | chr3_138533153_- | intronic |
| ADediting_1026429 | chr3_138533159_- | intronic |
| ADediting_1026430 | chr3_138533169_- | intronic |
| ADediting_1026431 | chr3_138533218_- | intronic |
| ADediting_1026432 | chr3_138533219_- | intronic |
| ADediting_1026433 | chr3_138533228_- | intronic |
| ADediting_1026434 | chr3_138533258_- | intronic |
| ADediting_1026435 | chr3_138533820_- | intronic |
| ADediting_1026436 | chr3_138533842_- | intronic |
| ADediting_1026437 | chr3_138533847_- | intronic |
| ADediting_1026438 | chr3_138533853_- | intronic |
| ADediting_1026439 | chr3_138533863_- | intronic |
| ADediting_1026440 | chr3_138533874_- | intronic |
| ADediting_1026441 | chr3_138533881_- | intronic |
| ADediting_1026442 | chr3_138533882_- | intronic |
| ADediting_1026443 | chr3_138533917_- | intronic |
| ADediting_1026444 | chr3_138533923_- | intronic |
| ADediting_1026445 | chr3_138533989_- | intronic |
| ADediting_1026446 | chr3_138534021_- | intronic |
| ADediting_1026447 | chr3_138534048_- | intronic |
| ADediting_1026448 | chr3_138539216_- | intronic |
| ADediting_1026449 | chr3_138539251_- | intronic |
| ADediting_1026450 | chr3_138539260_- | intronic |
| ADediting_1026451 | chr3_138539265_- | intronic |
| ADediting_1026452 | chr3_138539293_- | intronic |
| ADediting_1026453 | chr3_138540260_- | intronic |
| ADediting_1026454 | chr3_138541759_- | intronic |
| ADediting_1026455 | chr3_138545981_- | intronic |
| ADediting_1026456 | chr3_138545995_- | intronic |
| ADediting_1026457 | chr3_138546057_- | intronic |
| ADediting_1026458 | chr3_138546077_- | intronic |
| ADediting_1026459 | chr3_138546088_- | intronic |
| ADediting_1026460 | chr3_138546715_- | intronic |
| ADediting_1026461 | chr3_138550658_- | intronic |
| ADediting_1026462 | chr3_138553254_- | intronic |
| ADediting_1026463 | chr3_138553393_- | intronic |
| ADediting_1026464 | chr3_138553428_- | intronic |
| ADediting_1026465 | chr3_138554834_- | intronic |
| ADediting_1026466 | chr3_138554841_- | intronic |
| ADediting_1026467 | chr3_138554843_- | intronic |
| ADediting_1026468 | chr3_138554844_- | intronic |
| ADediting_1026469 | chr3_138554853_- | intronic |
| ADediting_1026470 | chr3_138554859_- | intronic |
| ADediting_1026471 | chr3_138554862_- | intronic |
| ADediting_1026472 | chr3_138554863_- | intronic |
| ADediting_1026473 | chr3_138554864_- | intronic |
| ADediting_1026474 | chr3_138554871_- | intronic |
| ADediting_1026475 | chr3_138554873_- | intronic |
| ADediting_1026476 | chr3_138554874_- | intronic |
| ADediting_1026477 | chr3_138554877_- | intronic |
| ADediting_1026478 | chr3_138554878_- | intronic |
| ADediting_1026479 | chr3_138556720_- | intronic |
| ADediting_1026480 | chr3_138556736_- | intronic |
| ADediting_1026481 | chr3_138556737_- | intronic |
| ADediting_1026482 | chr3_138556746_- | intronic |
| ADediting_1026483 | chr3_138557491_- | intronic |
| ADediting_1026484 | chr3_138558202_- | intronic |
| ADediting_1572257 | chr3_138495589_- | intronic |
| ADediting_1572258 | chr3_138495751_- | intronic |
| ADediting_1572259 | chr3_138495770_- | intronic |
| ADediting_1572260 | chr3_138498367_- | intronic |
| ADediting_1572261 | chr3_138498390_- | intronic |
| ADediting_1572262 | chr3_138498401_- | intronic |
| ADediting_1572263 | chr3_138498530_- | intronic |
| ADediting_1572264 | chr3_138498898_- | intronic |
| ADediting_1572265 | chr3_138499771_- | intronic |
| ADediting_1644661 | chr3_138541837_- | intronic |
| ADediting_1644662 | chr3_138546087_- | intronic |
| ADediting_1644663 | chr3_138550501_- | intronic |
| ADediting_1644664 | chr3_138550528_- | intronic |
| ADediting_1644665 | chr3_138550590_- | intronic |
| ADediting_1644666 | chr3_138550595_- | intronic |
| ADediting_1644667 | chr3_138550605_- | intronic |
| ADediting_1644668 | chr3_138550635_- | intronic |
| ADediting_1644669 | chr3_138550636_- | intronic |
| ADediting_1644670 | chr3_138554805_- | intronic |
| ADediting_1644671 | chr3_138554807_- | intronic |
| ADediting_1644672 | chr3_138554831_- | intronic |
| ADediting_1644673 | chr3_138554842_- | intronic |
| ADediting_1644674 | chr3_138555528_- | intronic |
| ADediting_1644675 | chr3_138555542_- | intronic |
| ADediting_1644676 | chr3_138587745_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1026330 | chr3_138495765_- | SINE | Alu | Name=AluSx1 |
| ADediting_1026331 | chr3_138495766_- | SINE | Alu | Name=AluSx1 |
| ADediting_1026332 | chr3_138495769_- | SINE | Alu | Name=AluSx1 |
| ADediting_1026333 | chr3_138498371_- | SINE | Alu | Name=AluY |
| ADediting_1026334 | chr3_138498395_- | SINE | Alu | Name=AluY |
| ADediting_1026335 | chr3_138498405_- | SINE | Alu | Name=AluY |
| ADediting_1026336 | chr3_138498410_- | SINE | Alu | Name=AluY |
| ADediting_1026337 | chr3_138498414_- | SINE | Alu | Name=AluY |
| ADediting_1026338 | chr3_138498434_- | SINE | Alu | Name=AluY |
| ADediting_1026339 | chr3_138498435_- | SINE | Alu | Name=AluY |
| ADediting_1026340 | chr3_138498443_- | SINE | Alu | Name=AluY |
| ADediting_1026341 | chr3_138498444_- | SINE | Alu | Name=AluY |
| ADediting_1026342 | chr3_138498449_- | SINE | Alu | Name=AluY |
| ADediting_1026343 | chr3_138498489_- | SINE | Alu | Name=AluY |
| ADediting_1026344 | chr3_138498499_- | SINE | Alu | Name=AluY |
| ADediting_1026345 | chr3_138498502_- | SINE | Alu | Name=AluY |
| ADediting_1026346 | chr3_138498506_- | SINE | Alu | Name=AluY |
| ADediting_1026347 | chr3_138498509_- | SINE | Alu | Name=AluY |
| ADediting_1026348 | chr3_138498511_- | SINE | Alu | Name=AluY |
| ADediting_1026349 | chr3_138498512_- | SINE | Alu | Name=AluY |
| ADediting_1026350 | chr3_138498513_- | SINE | Alu | Name=AluY |
| ADediting_1026351 | chr3_138498514_- | SINE | Alu | Name=AluY |
| ADediting_1026352 | chr3_138498515_- | SINE | Alu | Name=AluY |
| ADediting_1026353 | chr3_138498518_- | SINE | Alu | Name=AluY |
| ADediting_1026354 | chr3_138498529_- | SINE | Alu | Name=AluY |
| ADediting_1026355 | chr3_138498539_- | SINE | Alu | Name=AluY |
| ADediting_1026356 | chr3_138498549_- | SINE | Alu | Name=AluY |
| ADediting_1026357 | chr3_138498606_- | SINE | Alu | Name=AluY |
| ADediting_1026358 | chr3_138498607_- | SINE | Alu | Name=AluY |
| ADediting_1026359 | chr3_138498620_- | SINE | Alu | Name=AluY |
| ADediting_1026361 | chr3_138498785_- | SINE | Alu | Name=AluSz |
| ADediting_1026362 | chr3_138498791_- | SINE | Alu | Name=AluSz |
| ADediting_1026363 | chr3_138498803_- | SINE | Alu | Name=AluSz |
| ADediting_1026364 | chr3_138498804_- | SINE | Alu | Name=AluSz |
| ADediting_1026365 | chr3_138498850_- | SINE | Alu | Name=AluSz |
| ADediting_1026366 | chr3_138498864_- | SINE | Alu | Name=AluSz |
| ADediting_1026367 | chr3_138498881_- | SINE | Alu | Name=AluSz |
| ADediting_1026368 | chr3_138498884_- | SINE | Alu | Name=AluSz |
| ADediting_1026369 | chr3_138498902_- | SINE | Alu | Name=AluSz |
| ADediting_1026370 | chr3_138498906_- | SINE | Alu | Name=AluSz |
| ADediting_1026371 | chr3_138498908_- | SINE | Alu | Name=AluSz |
| ADediting_1026372 | chr3_138498959_- | SINE | Alu | Name=AluSz |
| ADediting_1026373 | chr3_138498960_- | SINE | Alu | Name=AluSz |
| ADediting_1026374 | chr3_138498963_- | SINE | Alu | Name=AluSz |
| ADediting_1026375 | chr3_138498964_- | SINE | Alu | Name=AluSz |
| ADediting_1026376 | chr3_138498970_- | SINE | Alu | Name=AluSz |
| ADediting_1026377 | chr3_138498994_- | SINE | Alu | Name=AluSz |
| ADediting_1026378 | chr3_138499032_- | SINE | Alu | Name=AluSz |
| ADediting_1026379 | chr3_138499671_- | SINE | Alu | Name=AluJb |
| ADediting_1026380 | chr3_138499678_- | SINE | Alu | Name=AluJb |
| ADediting_1026381 | chr3_138499680_- | SINE | Alu | Name=AluJb |
| ADediting_1026382 | chr3_138499693_- | SINE | Alu | Name=AluJb |
| ADediting_1026383 | chr3_138499715_- | SINE | Alu | Name=AluJb |
| ADediting_1026384 | chr3_138499719_- | SINE | Alu | Name=AluJb |
| ADediting_1026385 | chr3_138499720_- | SINE | Alu | Name=AluJb |
| ADediting_1026386 | chr3_138499733_- | SINE | Alu | Name=AluJb |
| ADediting_1026387 | chr3_138499734_- | SINE | Alu | Name=AluJb |
| ADediting_1026388 | chr3_138499740_- | SINE | Alu | Name=AluJb |
| ADediting_1026389 | chr3_138499745_- | SINE | Alu | Name=AluJb |
| ADediting_1026390 | chr3_138499764_- | SINE | Alu | Name=AluJb |
| ADediting_1026391 | chr3_138499765_- | SINE | Alu | Name=AluJb |
| ADediting_1026392 | chr3_138499781_- | SINE | Alu | Name=AluJb |
| ADediting_1026393 | chr3_138499783_- | SINE | Alu | Name=AluJb |
| ADediting_1026394 | chr3_138499975_- | SINE | Alu | Name=FLAM_C |
| ADediting_1026395 | chr3_138499985_- | SINE | Alu | Name=FLAM_C |
| ADediting_1026396 | chr3_138499990_- | SINE | Alu | Name=FLAM_C |
| ADediting_1026397 | chr3_138499991_- | SINE | Alu | Name=FLAM_C |
| ADediting_1026398 | chr3_138499999_- | SINE | Alu | Name=FLAM_C |
| ADediting_1026399 | chr3_138500003_- | SINE | Alu | Name=AluJr |
| ADediting_1026400 | chr3_138500004_- | SINE | Alu | Name=AluJr |
| ADediting_1026401 | chr3_138500009_- | SINE | Alu | Name=AluJr |
| ADediting_1026402 | chr3_138500028_- | SINE | Alu | Name=AluJr |
| ADediting_1026403 | chr3_138500045_- | SINE | Alu | Name=AluJr |
| ADediting_1026404 | chr3_138500053_- | SINE | Alu | Name=AluJr |
| ADediting_1026405 | chr3_138510351_- | SINE | Alu | Name=AluSx |
| ADediting_1026406 | chr3_138510357_- | SINE | Alu | Name=AluSx |
| ADediting_1026407 | chr3_138510389_- | SINE | Alu | Name=AluSx |
| ADediting_1026408 | chr3_138510402_- | SINE | Alu | Name=AluSx |
| ADediting_1026409 | chr3_138510411_- | SINE | Alu | Name=AluSx |
| ADediting_1026410 | chr3_138510419_- | SINE | Alu | Name=AluSx |
| ADediting_1026411 | chr3_138511068_- | SINE | Alu | Name=AluSg |
| ADediting_1026412 | chr3_138511069_- | SINE | Alu | Name=AluSg |
| ADediting_1026413 | chr3_138528121_- | SINE | Alu | Name=AluJr |
| ADediting_1026414 | chr3_138528133_- | SINE | Alu | Name=AluJr |
| ADediting_1026415 | chr3_138528147_- | SINE | Alu | Name=AluJr |
| ADediting_1026416 | chr3_138528303_- | SINE | Alu | Name=AluJr |
| ADediting_1026417 | chr3_138533025_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026418 | chr3_138533037_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026419 | chr3_138533038_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026420 | chr3_138533060_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026421 | chr3_138533075_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026422 | chr3_138533083_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026423 | chr3_138533097_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026424 | chr3_138533114_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026425 | chr3_138533117_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026426 | chr3_138533123_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026427 | chr3_138533132_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026428 | chr3_138533153_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026429 | chr3_138533159_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026430 | chr3_138533169_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026431 | chr3_138533218_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026432 | chr3_138533219_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026433 | chr3_138533228_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026434 | chr3_138533258_- | SINE | Alu | Name=AluSx3 |
| ADediting_1026435 | chr3_138533820_- | SINE | Alu | Name=AluY |
| ADediting_1026436 | chr3_138533842_- | SINE | Alu | Name=AluY |
| ADediting_1026437 | chr3_138533847_- | SINE | Alu | Name=AluY |
| ADediting_1026438 | chr3_138533853_- | SINE | Alu | Name=AluY |
| ADediting_1026439 | chr3_138533863_- | SINE | Alu | Name=AluY |
| ADediting_1026440 | chr3_138533874_- | SINE | Alu | Name=AluY |
| ADediting_1026441 | chr3_138533881_- | SINE | Alu | Name=AluY |
| ADediting_1026442 | chr3_138533882_- | SINE | Alu | Name=AluY |
| ADediting_1026443 | chr3_138533917_- | SINE | Alu | Name=AluY |
| ADediting_1026444 | chr3_138533923_- | SINE | Alu | Name=AluY |
| ADediting_1026445 | chr3_138533989_- | SINE | Alu | Name=AluY |
| ADediting_1026446 | chr3_138534021_- | SINE | Alu | Name=AluY |
| ADediting_1026447 | chr3_138534048_- | SINE | Alu | Name=AluY |
| ADediting_1026448 | chr3_138539216_- | SINE | Alu | Name=AluSz |
| ADediting_1026449 | chr3_138539251_- | SINE | Alu | Name=AluSz |
| ADediting_1026450 | chr3_138539260_- | SINE | Alu | Name=AluSz |
| ADediting_1026451 | chr3_138539265_- | SINE | Alu | Name=AluSz |
| ADediting_1026452 | chr3_138539293_- | SINE | Alu | Name=AluSz |
| ADediting_1026453 | chr3_138540260_- | SINE | Alu | Name=AluSx |
| ADediting_1026454 | chr3_138541759_- | SINE | Alu | Name=AluJb |
| ADediting_1026455 | chr3_138545981_- | LTR | ERVK | Name=MER11A |
| ADediting_1026456 | chr3_138545995_- | LTR | ERVK | Name=MER11A |
| ADediting_1026457 | chr3_138546057_- | LTR | ERVK | Name=MER11A |
| ADediting_1026458 | chr3_138546077_- | LTR | ERVK | Name=MER11A |
| ADediting_1026459 | chr3_138546088_- | LTR | ERVK | Name=MER11A |
| ADediting_1026460 | chr3_138546715_- | SINE | Alu | Name=AluSx1 |
| ADediting_1026461 | chr3_138550658_- | SINE | Alu | Name=AluSq2 |
| ADediting_1026462 | chr3_138553254_- | SINE | Alu | Name=AluY |
| ADediting_1026463 | chr3_138553393_- | SINE | Alu | Name=AluY |
| ADediting_1026464 | chr3_138553428_- | SINE | Alu | Name=AluY |
| ADediting_1026465 | chr3_138554834_- | LINE | L1 | Name=L1PB |
| ADediting_1026466 | chr3_138554841_- | LINE | L1 | Name=L1PB |
| ADediting_1026467 | chr3_138554843_- | LINE | L1 | Name=L1PB |
| ADediting_1026468 | chr3_138554844_- | LINE | L1 | Name=L1PB |
| ADediting_1026469 | chr3_138554853_- | LINE | L1 | Name=L1PB |
| ADediting_1026470 | chr3_138554859_- | LINE | L1 | Name=L1PB |
| ADediting_1026471 | chr3_138554862_- | LINE | L1 | Name=L1PB |
| ADediting_1026472 | chr3_138554863_- | LINE | L1 | Name=L1PB |
| ADediting_1026473 | chr3_138554864_- | LINE | L1 | Name=L1PB |
| ADediting_1026474 | chr3_138554871_- | LINE | L1 | Name=L1PB |
| ADediting_1026475 | chr3_138554873_- | LINE | L1 | Name=L1PB |
| ADediting_1026476 | chr3_138554874_- | LINE | L1 | Name=L1PB |
| ADediting_1026477 | chr3_138554877_- | LINE | L1 | Name=L1PB |
| ADediting_1026478 | chr3_138554878_- | LINE | L1 | Name=L1PB |
| ADediting_1026479 | chr3_138556720_- | LTR | ERVK | Name=MER11C |
| ADediting_1026480 | chr3_138556736_- | LTR | ERVK | Name=MER11C |
| ADediting_1026481 | chr3_138556737_- | LTR | ERVK | Name=MER11C |
| ADediting_1026482 | chr3_138556746_- | LTR | ERVK | Name=MER11C |
| ADediting_1026483 | chr3_138557491_- | LTR | ERVK | Name=MER11C |
| ADediting_1026484 | chr3_138558202_- | SINE | Alu | Name=AluSx |
| ADediting_1572257 | chr3_138495589_- | SINE | Alu | Name=AluSx1 |
| ADediting_1572258 | chr3_138495751_- | SINE | Alu | Name=AluSx1 |
| ADediting_1572259 | chr3_138495770_- | SINE | Alu | Name=AluSx1 |
| ADediting_1572260 | chr3_138498367_- | SINE | Alu | Name=AluY |
| ADediting_1572261 | chr3_138498390_- | SINE | Alu | Name=AluY |
| ADediting_1572262 | chr3_138498401_- | SINE | Alu | Name=AluY |
| ADediting_1572263 | chr3_138498530_- | SINE | Alu | Name=AluY |
| ADediting_1572264 | chr3_138498898_- | SINE | Alu | Name=AluSz |
| ADediting_1572265 | chr3_138499771_- | SINE | Alu | Name=AluJb |
| ADediting_1644661 | chr3_138541837_- | SINE | Alu | Name=AluJb |
| ADediting_1644662 | chr3_138546087_- | LTR | ERVK | Name=MER11A |
| ADediting_1644663 | chr3_138550501_- | SINE | Alu | Name=AluSq2 |
| ADediting_1644664 | chr3_138550528_- | SINE | Alu | Name=AluSq2 |
| ADediting_1644665 | chr3_138550590_- | SINE | Alu | Name=AluSq2 |
| ADediting_1644666 | chr3_138550595_- | SINE | Alu | Name=AluSq2 |
| ADediting_1644667 | chr3_138550605_- | SINE | Alu | Name=AluSq2 |
| ADediting_1644668 | chr3_138550635_- | SINE | Alu | Name=AluSq2 |
| ADediting_1644669 | chr3_138550636_- | SINE | Alu | Name=AluSq2 |
| ADediting_1644670 | chr3_138554805_- | LINE | L1 | Name=L1PB |
| ADediting_1644671 | chr3_138554807_- | LINE | L1 | Name=L1PB |
| ADediting_1644672 | chr3_138554831_- | LINE | L1 | Name=L1PB |
| ADediting_1644673 | chr3_138554842_- | LINE | L1 | Name=L1PB |
| ADediting_1644674 | chr3_138555528_- | LINE | L1 | Name=L1PB1 |
| ADediting_1644675 | chr3_138555542_- | LINE | L1 | Name=L1PB1 |
| ADediting_1644676 | chr3_138587745_- | SINE | Alu | Name=AluJr |
Top |
RNA A-to-I editing events in the alternative splicing sites for CEP70 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for CEP70 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for CEP70 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for CEP70 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1026394 | chr3_138499975_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-18a-3p | chr3 | 138499970 | 138499976 | 7mer-m8 | 138499969 | 138499991 | 140 | -26.51 |
| ADediting_1026394 | chr3_138499975_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-3173-5p | chr3 | 138499971 | 138499978 | 8mer-1a | 138499971 | 138499993 | 141 | -17.32 |
| ADediting_1026394 | chr3_138499975_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-6799-3p | chr3 | 138499971 | 138499978 | 8mer-1a | 138499971 | 138499993 | 144 | -20.1 |
| ADediting_1026394 | chr3_138499975_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-767-3p | chr3 | 138499975 | 138499981 | 7mer-m8 | 138499974 | 138499996 | 147 | -16.62 |
| ADediting_1026394 | chr3_138499975_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-874-3p | chr3 | 138499971 | 138499977 | 7mer-m8 | 138499970 | 138499992 | 154 | -25.62 |
| ADediting_1026396 | chr3_138499990_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-4535 | chr3 | 138499985 | 138499991 | 7mer-m8 | 138499984 | 138500004 | 146 | -23.74 |
| ADediting_1026397 | chr3_138499991_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-371a-5p | chr3 | 138499989 | 138499995 | 7mer-m8 | 138499988 | 138500008 | 157 | -20.97 |
| ADediting_1026397 | chr3_138499991_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-888-5p | chr3 | 138499988 | 138499994 | 7mer-m8 | 138499987 | 138500007 | 146 | -11.81 |
| ADediting_1026399 | chr3_138500003_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-10400-3p | chr3 | 138499999 | 138500005 | 7mer-m8 | 138499998 | 138500019 | 140 | -20.37 |
| ADediting_1026399 | chr3_138500003_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-4437 | chr3 | 138499999 | 138500006 | 8mer-1a | 138499999 | 138500019 | 146 | -19.6 |
| ADediting_1026399 | chr3_138500003_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-4674 | chr3 | 138499999 | 138500005 | 7mer-m8 | 138499998 | 138500018 | 147 | -22.8 |
| ADediting_1026402 | chr3_138500028_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-3943 | chr3 | 138500024 | 138500030 | 7mer-m8 | 138500023 | 138500043 | 146 | -22.28 |
| ADediting_1026403 | chr3_138500045_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-140-3p | chr3 | 138500043 | 138500049 | 7mer-m8 | 138500042 | 138500062 | 156 | -22.58 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1026395 | chr3_138499985_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-3654 | chr3 | 138499983 | 138499989 | 7mer-m8 | 138499982 | 138500002 | 148 | -18.84 |
| ADediting_1026395 | chr3_138499985_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-378b | chr3 | 138499984 | 138499990 | 7mer-m8 | 138499983 | 138500001 | 152 | -18.59 |
| ADediting_1026395 | chr3_138499985_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-378f | chr3 | 138499984 | 138499990 | 7mer-m8 | 138499983 | 138500002 | 152 | -20.77 |
| ADediting_1026395 | chr3_138499985_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-378h | chr3 | 138499984 | 138499990 | 7mer-m8 | 138499983 | 138500003 | 151 | -22.28 |
| ADediting_1026395 | chr3_138499985_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-378i | chr3 | 138499984 | 138499990 | 7mer-m8 | 138499983 | 138500003 | 151 | -19.21 |
| ADediting_1026395 | chr3_138499985_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-4463 | chr3 | 138499981 | 138499987 | 7mer-m8 | 138499980 | 138499996 | 143 | -15.39 |
| ADediting_1026395 | chr3_138499985_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-4494 | chr3 | 138499979 | 138499986 | 8mer-1a | 138499979 | 138499999 | 149 | -17.57 |
| ADediting_1026395 | chr3_138499985_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-5009-5p | chr3 | 138499985 | 138499991 | 7mer-m8 | 138499984 | 138500010 | 145 | -20.72 |
| ADediting_1026395 | chr3_138499985_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-8058 | chr3 | 138499985 | 138499991 | 7mer-m8 | 138499984 | 138500006 | 155 | -19.81 |
| ADediting_1026396 | chr3_138499990_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-302a-5p | chr3 | 138499989 | 138499995 | 7mer-m8 | 138499988 | 138500012 | 148 | -11.75 |
| ADediting_1026396 | chr3_138499990_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-5009-5p | chr3 | 138499985 | 138499991 | 7mer-m8 | 138499984 | 138500010 | 145 | -20.72 |
| ADediting_1026396 | chr3_138499990_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-8058 | chr3 | 138499985 | 138499991 | 7mer-m8 | 138499984 | 138500006 | 155 | -19.81 |
| ADediting_1026397 | chr3_138499991_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-302a-5p | chr3 | 138499989 | 138499995 | 7mer-m8 | 138499988 | 138500012 | 148 | -11.75 |
| ADediting_1026398 | chr3_138499999_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-1343-3p | chr3 | 138499996 | 138500002 | 7mer-m8 | 138499995 | 138500016 | 140 | -20.85 |
| ADediting_1026398 | chr3_138499999_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-6742-3p | chr3 | 138499996 | 138500003 | 8mer-1a | 138499996 | 138500015 | 145 | -17.41 |
| ADediting_1026398 | chr3_138499999_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-6783-3p | chr3 | 138499996 | 138500002 | 7mer-m8 | 138499995 | 138500015 | 146 | -19.15 |
| ADediting_1026401 | chr3_138500009_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-1245a | chr3 | 138500007 | 138500013 | 7mer-m8 | 138500006 | 138500026 | 141 | -20.65 |
| ADediting_1026401 | chr3_138500009_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-8079 | chr3 | 138500007 | 138500013 | 7mer-m8 | 138500006 | 138500025 | 153 | -15.79 |
| ADediting_1026402 | chr3_138500028_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-150-5p | chr3 | 138500027 | 138500033 | 7mer-m8 | 138500026 | 138500049 | 142 | -15.65 |
| ADediting_1026402 | chr3_138500028_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-6778-3p | chr3 | 138500025 | 138500031 | 7mer-m8 | 138500024 | 138500044 | 140 | -14.56 |
| ADediting_1026403 | chr3_138500045_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-7151-3p | chr3 | 138500045 | 138500051 | 7mer-m8 | 138500044 | 138500065 | 141 | -19.09 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000114107.9 | ENST00000464035.5 | CEP70-205 | hsa-miR-5688 | chr3 | 138537118 | 138537124 | 7mer-m8 | 138537117 | 138537140 | 155 | -13.38 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000114107.9 | ENST00000464035.5 | CEP70-205 | hsa-miR-5688 | chr3 | 138537122 | 138537128 | 7mer-m8 | 138537117 | 138537140 | 155 | -13.38 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000114107.9 | ENST00000464035.5 | CEP70-205 | hsa-miR-5688 | chr3 | 138537126 | 138537132 | 7mer-m8 | 138537117 | 138537140 | 155 | -13.38 |
| ADediting_291761 | chr11_93733708_- | ENSG00000114107.9 | ENST00000481834.5 | CEP70-210 | hsa-miR-1304-3p | chr3 | 138499965 | 138499972 | 8mer-1a | 138499965 | 138499987 | 148 | -21.47 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for CEP70 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000481834.5 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1026394 | ENST00000481834.5 | chr3_138499975_- | 1946 | -490.50 | -488.00 | -496.70 |
| ADediting_1026395 | ENST00000481834.5 | chr3_138499985_- | 1936 | -491.20 | -488.00 | -496.70 |
| ADediting_1026396 | ENST00000481834.5 | chr3_138499990_- | 1931 | -488.70 | -488.00 | -496.70 |
| ADediting_1026397 | ENST00000481834.5 | chr3_138499991_- | 1930 | -487.30 | -488.00 | -496.70 |
| ADediting_1026398 | ENST00000481834.5 | chr3_138499999_- | 1922 | -488.00 | -488.00 | -496.70 |
| ADediting_1026399 | ENST00000481834.5 | chr3_138500003_- | 1918 | -489.80 | -488.00 | -496.70 |
| ADediting_1026400 | ENST00000481834.5 | chr3_138500004_- | 1917 | -488.40 | -488.00 | -496.70 |
| ADediting_1026401 | ENST00000481834.5 | chr3_138500009_- | 1912 | -488.20 | -488.00 | -496.70 |
| ADediting_1026402 | ENST00000481834.5 | chr3_138500028_- | 1893 | -487.10 | -488.00 | -496.70 |
| ADediting_1026403 | ENST00000481834.5 | chr3_138500045_- | 1876 | -487.60 | -488.00 | -496.70 |
| ADediting_1026404 | ENST00000481834.5 | chr3_138500053_- | 1868 | -488.80 | -488.00 | -496.70 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for CEP70 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1026330 | chr3_138495765_- | 0.000358170523429985 | 0.287640849540161 | 1.00729049498333e-06 | 0.386861803313753 | 0.00128751462748785 | 0.260437854100223 |
| DLPFC | ADediting_1026339 | chr3_138498435_- | 0.000496756976469205 | 0.196652267414272 | 0.156842703985505 | 0.0806050934651872 | 6.3996109379865e-19 | 0.475822218345278 |
| DLPFC | ADediting_1026340 | chr3_138498443_- | 0.00204825881177002 | 0.174470657397225 | 0.240507762081472 | 0.0668582140238692 | 1.61647298578768e-13 | 0.402746339065074 |
| CER | ADediting_1026340 | chr3_138498443_- | 6.03628711904868e-05 | 0.321480148481318 | 0.00551753205928688 | 0.225549898867985 | 0.185408880893454 | -0.108715982167669 |
| DLPFC | ADediting_1026343 | chr3_138498489_- | 8.88032308319949e-10 | 0.339070989843469 | 1.66362032865893e-07 | 0.291920783882018 | 6.0094744701806e-06 | 0.253864694067939 |
| CER | ADediting_1026343 | chr3_138498489_- | 3.42088144009974e-12 | 0.529021319719399 | 4.85417785570531e-06 | 0.363418433033891 | 0.0544865495590253 | 0.157344892918859 |
| TCX | ADediting_1026343 | chr3_138498489_- | 3.07023279634752e-05 | 0.333334791920969 | 0.00782477528326156 | 0.216381697192897 | 0.0360448404289643 | 0.171337501779143 |
| DLPFC | ADediting_1026344 | chr3_138498499_- | 3.56946967560344e-12 | 0.381429209351502 | 2.67242670040543e-09 | 0.329798480326133 | 8.88389159857336e-05 | 0.220736221530248 |
| CER | ADediting_1026344 | chr3_138498499_- | 2.07242278824035e-09 | 0.464804509994539 | 3.61959418782996e-05 | 0.330493011013298 | 0.226693010498583 | 0.0992945326347765 |
| TCX | ADediting_1026344 | chr3_138498499_- | 1.51994956138285e-05 | 0.345168581361728 | 0.00186419024915818 | 0.25201210290069 | 0.115384708247792 | 0.129094273599747 |
| DLPFC | ADediting_1026347 | chr3_138498509_- | 3.97639959026588e-14 | 0.411925410729111 | 1.30186252779768e-09 | 0.335886230028252 | 3.09539737025891e-06 | 0.261356343129833 |
| CER | ADediting_1026347 | chr3_138498509_- | 5.83149826443618e-05 | 0.322097422911656 | 0.00236117665363804 | 0.246482846714185 | 0.303366684973954 | 0.0845940589860032 |
| DLPFC | ADediting_1026348 | chr3_138498511_- | 1.27046210540555e-12 | 0.388717114594423 | 9.90714696153425e-10 | 0.338163750873132 | 4.0427443951474e-06 | 0.258368914342894 |
| CER | ADediting_1026348 | chr3_138498511_- | 1.50161833070611e-11 | 0.515336683693061 | 2.48690557376837e-06 | 0.37361296697401 | 0.0318380139823786 | 0.175362537166267 |
| TCX | ADediting_1026348 | chr3_138498511_- | 4.13769543383286e-05 | 0.328162678013727 | 0.0376659477778249 | 0.169891983307119 | 0.0222738320783465 | 0.186543070103884 |
| DLPFC | ADediting_1026349 | chr3_138498512_- | 7.70521930472906e-09 | 0.320583762118726 | 9.74479660458862e-07 | 0.273885655536125 | 0.000951459980562308 | 0.186783152089791 |
| CER | ADediting_1026349 | chr3_138498512_- | 4.59920536225925e-07 | 0.397903002176415 | 0.000553416748805094 | 0.278698296904061 | 0.35636548807296 | 0.075832386027167 |
| DLPFC | ADediting_1026350 | chr3_138498513_- | 1.39128276004393e-09 | 0.335329465709505 | 1.589935977632e-07 | 0.292366776460049 | 0.000504304711382014 | 0.196428619011682 |
| CER | ADediting_1026350 | chr3_138498513_- | 2.0796503479924e-07 | 0.408688382566731 | 0.000600656391059515 | 0.276980997583411 | 0.443057967573332 | 0.0630938972593794 |
| CER | ADediting_1026351 | chr3_138498514_- | 8.23521519373893e-06 | 0.355107036203485 | 0.000330707981643717 | 0.289248835037335 | 0.18275965623781 | -0.109370630903163 |
| DLPFC | ADediting_1026352 | chr3_138498515_- | 3.27731044436539e-10 | 0.347203961745781 | 8.70073633577743e-08 | 0.298230607543699 | 0.000148871919456049 | 0.213792460775314 |
| CER | ADediting_1026352 | chr3_138498515_- | 5.83334042702762e-07 | 0.394597312141506 | 0.00390722591958624 | 0.234276521763848 | 0.0226307299985916 | 0.186057655701502 |
| CER | ADediting_1026353 | chr3_138498518_- | 7.03667393981628e-07 | 0.391963631262813 | 0.00087630388040612 | 0.268915997442443 | 0.490768507800166 | 0.0566927055690985 |
| CER | ADediting_1026354 | chr3_138498529_- | 8.1783435668092e-08 | 0.420904300938113 | 3.79057211718322e-05 | 0.329691142515832 | 0.238221298452506 | 0.0968849787010795 |
| DLPFC | ADediting_1026359 | chr3_138498620_- | 1.13398008750305e-09 | 0.337039817377648 | 2.63438173884129e-07 | 0.287351761722268 | 1.2402292804584e-07 | 0.294798739291578 |
| CER | ADediting_1026359 | chr3_138498620_- | 1.51763014309058e-11 | 0.515236321313761 | 9.42896117454037e-09 | 0.447453751678909 | 0.0262868461651129 | 0.181430614050262 |
| CER | ADediting_1026361 | chr3_138498785_- | 9.33950072993059e-17 | 0.611572676532832 | 3.70060263237135e-09 | 0.4582787651747 | 0.133565760463519 | 0.123053207513542 |
| CER | ADediting_1026362 | chr3_138498791_- | 4.68680172646573e-17 | 0.616250720869807 | 1.38956637134052e-11 | 0.516069504039536 | 0.422139161734911 | 0.0660222050185172 |
| TCX | ADediting_1026362 | chr3_138498791_- | 1.0999123380603e-07 | 0.417077965263568 | 8.84591407991586e-10 | 0.474145216016491 | 0.611941704867882 | -0.0417523862572051 |
| CER | ADediting_1026364 | chr3_138498804_- | 1.59973124365977e-05 | 0.344323532009773 | 0.00144097679045182 | 0.257903364565324 | 0.805536709147046 | 0.0202686570624848 |
| DLPFC | ADediting_1026365 | chr3_138498850_- | 1.37732216749787e-05 | 0.244157651798851 | 0.00474881749850078 | 0.159981598940201 | 3.46647111785239e-10 | 0.346752302915638 |
| CER | ADediting_1026365 | chr3_138498850_- | 1.7716431797384e-09 | 0.466546217866528 | 1.67153289537826e-06 | 0.379508912409813 | 0.123438098379854 | 0.126333769604024 |
| DLPFC | ADediting_1026366 | chr3_138498864_- | 2.61782831331231e-06 | 0.263212750399372 | 0.000765179281584283 | 0.190145969652962 | 1.20896155638863e-10 | 0.355113339699307 |
| CER | ADediting_1026366 | chr3_138498864_- | 4.83395263066243e-09 | 0.45522486082024 | 5.18329885261885e-07 | 0.396244832658831 | 0.106739540153811 | 0.132229946846713 |
| DLPFC | ADediting_1026367 | chr3_138498881_- | 0.000605884832502869 | 0.193687230682127 | 0.0308422927284302 | 0.122660821661794 | 1.58408292852396e-08 | 0.314129855031611 |
| CER | ADediting_1026367 | chr3_138498881_- | 1.48571047677172e-05 | 0.345544150624116 | 0.000216212952980713 | 0.297659080505576 | 0.573953515365088 | -0.0462690484334188 |
| CER | ADediting_1026368 | chr3_138498884_- | 9.1129387250186e-09 | 0.447855014036055 | 3.89212643668934e-07 | 0.400203182742513 | 0.256101571706561 | 0.093303822845894 |
| CER | ADediting_1026369 | chr3_138498902_- | 1.75997770851788e-06 | 0.378750242769086 | 1.83336671998799e-05 | 0.3420597908404 | 0.889558288464561 | 0.0114334043379209 |
| CER | ADediting_1026370 | chr3_138498906_- | 1.42657682769717e-05 | 0.346212456345613 | 7.24180032287533e-05 | 0.318201445963388 | 0.734398810389693 | 0.0279303400436803 |
| DLPFC | ADediting_1026372 | chr3_138498959_- | 1.02201759727622e-05 | 0.247695491393428 | 0.000672138923420477 | 0.192120484240261 | 2.63640988820268e-10 | 0.348948675692684 |
| CER | ADediting_1026372 | chr3_138498959_- | 7.92332404083924e-06 | 0.355722071928562 | 2.79658619489737e-06 | 0.371848972593345 | 0.0617702410613946 | 0.152897806135193 |
| DLPFC | ADediting_1026373 | chr3_138498960_- | 0.00137067593758432 | 0.181017888146104 | 0.02172452105208 | 0.130325818830859 | 1.43208795949903e-09 | 0.335086840551558 |
| DLPFC | ADediting_1026374 | chr3_138498963_- | 9.15940776010916e-06 | 0.248981698711738 | 0.00186100226601348 | 0.17605371972413 | 3.41991025862089e-10 | 0.346861213146315 |
| CER | ADediting_1026374 | chr3_138498963_- | 0.000100008816781371 | 0.312293900167899 | 0.000124897639390657 | 0.308153627183695 | 0.11684251523004 | 0.128583721242067 |
| DLPFC | ADediting_1026376 | chr3_138498970_- | 0.000147137108089641 | 0.213952593733132 | 0.0217096077267874 | 0.130340478572949 | 4.30512031837048e-14 | 0.411413003095383 |
| CER | ADediting_1026376 | chr3_138498970_- | 9.8568159583968e-05 | 0.312562114838185 | 2.44942395005312e-05 | 0.337189796741992 | 0.0161009769695771 | 0.196226793685841 |
| DLPFC | ADediting_1026377 | chr3_138498994_- | 2.65363754219214e-07 | 0.287278716251772 | 0.000179627430892671 | 0.211210533633575 | 1.66048652307261e-09 | 0.33384151886595 |
| DLPFC | ADediting_1026378 | chr3_138499032_- | 0.00107172780361798 | 0.18492182107733 | 0.00817703267957995 | 0.149962712303312 | 1.96712023373378e-08 | 0.312160074338388 |
| CER | ADediting_1026381 | chr3_138499680_- | 4.23814965607329e-06 | 0.36551542043199 | 3.24446033059931e-07 | 0.402691565312082 | 0.874694305737126 | 0.0129841121280241 |
| CER | ADediting_1026384 | chr3_138499719_- | 2.53528006782833e-07 | 0.406031708745071 | 8.17328573143725e-06 | 0.35522738430982 | 0.0459196007787086 | 0.163254027925934 |
| CER | ADediting_1026386 | chr3_138499733_- | 3.06671636800011e-12 | 0.53000851309823 | 3.06763462076611e-10 | 0.485385853936386 | 0.658820870204533 | 0.0363438480698859 |
| CER | ADediting_1026387 | chr3_138499734_- | 1.05682073079484e-12 | 0.539467451747942 | 5.37376414697479e-10 | 0.479486209169634 | 0.136393030959325 | 0.122171609261962 |
| CER | ADediting_1026388 | chr3_138499740_- | 9.78907878919807e-13 | 0.540136203822749 | 2.94128995699978e-09 | 0.460880000195413 | 0.312546645488724 | 0.0830094068024791 |
| TCX | ADediting_1026388 | chr3_138499740_- | 3.93747144184199e-05 | 0.329028893908655 | 0.0810069276874382 | 0.142931567804821 | 0.000181092515296783 | 0.301092427780364 |
| CER | ADediting_1026389 | chr3_138499745_- | 1.27642627960536e-09 | 0.470156353650079 | 2.67645215874131e-05 | 0.335683272408205 | 0.156783043053865 | 0.116193838256731 |
| TCX | ADediting_1026389 | chr3_138499745_- | 0.00318873074839959 | 0.239273396893123 | 0.5355246893141 | 0.0509832740313272 | 2.37549716695622e-05 | 0.337708848291703 |
| CER | ADediting_1026390 | chr3_138499764_- | 6.92092418455466e-13 | 0.543145555804387 | 7.17137061167309e-09 | 0.450660655902472 | 0.127645892749077 | 0.124946514744934 |
| CER | ADediting_1026395 | chr3_138499985_- | 2.04748892525554e-14 | 0.572108692557704 | 8.90028303087703e-08 | 0.419816816507793 | 0.256451234327055 | 0.0932355395275536 |
| TCX | ADediting_1026395 | chr3_138499985_- | 1.21622212119735e-09 | 0.470684856378595 | 2.04099462808762e-12 | 0.533658484799279 | 0.227351205117995 | -0.0991546701664447 |
| CER | ADediting_1026397 | chr3_138499991_- | 3.3899147824942e-11 | 0.50753508560857 | 1.84237860458158e-06 | 0.378075368155747 | 0.17625447278459 | 0.111008229149687 |
| TCX | ADediting_1026397 | chr3_138499991_- | 1.86306050374352e-05 | 0.341791825433461 | 3.34648076683676e-06 | 0.369130595234001 | 0.994681491751382 | -0.000548852569017941 |
| CER | ADediting_1026398 | chr3_138499999_- | 8.03617527816007e-05 | 0.316310084753787 | 0.00211905390742717 | 0.249029035221146 | 0.667371443234169 | -0.0353745594112863 |
| DLPFC | ADediting_1026399 | chr3_138500003_- | 1.54961952265024e-08 | 0.3143291219848 | 1.60908906313936e-11 | 0.370470267370569 | 0.725874321444744 | -0.0199925864969869 |
| CER | ADediting_1026399 | chr3_138500003_- | 1.92296832286498e-12 | 0.534188811716281 | 3.69786766710835e-07 | 0.400905225975995 | 0.808523635446669 | -0.019951180838529 |
| TCX | ADediting_1026399 | chr3_138500003_- | 3.20584892852567e-06 | 0.369782982250822 | 1.75835409909754e-14 | 0.573299812822753 | 0.00263488102254053 | -0.243875151276684 |
| CER | ADediting_1026402 | chr3_138500028_- | 2.12533706947463e-05 | 0.339585772352407 | 0.00237825874982286 | 0.246312283815524 | 0.889230505879189 | -0.0114675555080734 |
| DLPFC | ADediting_1026403 | chr3_138500045_- | 1.33128724107058e-07 | 0.294107378564706 | 1.31576258050314e-10 | 0.35445039877727 | 0.11102249881339 | -0.0906909582985774 |
| CER | ADediting_1026403 | chr3_138500045_- | 3.61137456336084e-07 | 0.401229215043449 | 0.000587615969612618 | 0.277442255745548 | 0.412610679111203 | 0.0673838411800623 |
| TCX | ADediting_1026403 | chr3_138500045_- | 3.48083933358754e-06 | 0.368531176657806 | 2.55040062209462e-07 | 0.405951608502821 | 0.00139083287982747 | -0.258703219260159 |
| DLPFC | ADediting_1026422 | chr3_138533083_- | 0.000299761221612514 | 0.204007398391516 | 0.0255910862538989 | 0.126789704001323 | 4.98852994358264e-12 | 0.379028475995038 |
| DLPFC | ADediting_1026423 | chr3_138533097_- | 0.0216173266176368 | 0.13043138501797 | 0.299518505371215 | 0.0591113939356008 | 8.62811982935718e-12 | 0.375055894593307 |
| DLPFC | ADediting_1026424 | chr3_138533114_- | 0.105938412354615 | 0.0920004351218611 | 0.852499029171659 | -0.0106026952586754 | 2.31126249928294e-16 | 0.443404328681146 |
| DLPFC | ADediting_1026425 | chr3_138533117_- | 0.0952395542483943 | 0.094927226299746 | 0.734839363007225 | -0.0193128190286167 | 1.43931869687556e-20 | 0.495022029288667 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 5.5482100547618e-37 | 0.639047672772081 | 4.95127937555931e-38 | 0.646182026297777 | 0.275918945042342 | 0.062072379175149 |
| AC | 2.89880562052492e-69 | 0.844683378457282 | 7.72094842342811e-40 | 0.711240355946392 | 2.01063159716888e-23 | 0.57522341932446 |
| PCC | 4.52088904024426e-27 | 0.678089420240596 | 2.53500673746577e-25 | 0.660637604471727 | 3.98559521113081e-10 | 0.432902958191287 |
| CER | 3.69406700271576e-28 | 0.748219771972262 | 8.70089541369735e-16 | 0.595880415712134 | 3.79554455703203e-06 | 0.367208927045388 |
| TCX | 3.39298185990618e-21 | 0.673867833254138 | 0.00020151346647649 | 0.299027944648153 | 6.93172162894738e-12 | 0.522564252979606 |
| FP | 2.04585388437531e-21 | 0.634178171208885 | 3.08444323381134e-20 | 0.619374188238576 | 0.00245391270761528 | 0.22568429635021 |
| IFG | 0.00385938722492042 | 0.556559254631201 | 0.000590823076599093 | 0.63864120577465 | 0.149843241073465 | 0.296674404047959 |
| PG | 5.13719935507038e-42 | 0.796218758438971 | 7.67754246003554e-22 | 0.628530980756933 | 0.541528094913037 | 0.0450452472372467 |
| STG | 4.27019892005387e-14 | 0.709382821939247 | 1.19001966815872e-11 | 0.656600259663775 | 0.0362301084192275 | 0.228897231999466 |
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Relation with AD stages for CEP70 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1026375 | chr3_138498964_- | 0.000459740922117779 | 0.331372889643512 |
| CER | ADediting_1026393 | chr3_138499783_- | 0.000951305510397732 | 0.313569292444355 |
| TCX | ADediting_1026340 | chr3_138498443_- | 0.000314848630317021 | 0.343304362216782 |
| TCX | ADediting_1026367 | chr3_138498881_- | 0.000996436039068031 | 0.315246710391301 |
| IFG | ADediting_1026343 | chr3_138498489_- | 0.0238272635805609 | 0.450496241781338 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 1.21244888113678e-07 | 0.482791503040906 |
| TCX | 4.33535832133462e-09 | 0.532170623450292 |
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RelatedDrugs for CEP70 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CEP70 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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