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	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene

Gene summary for MED28

Gene summary

Gene information	Gene symbol	MED28
	Gene ID	80306
	Gene name	mediator complex subunit 28
	Synonyms	1500003D12Rik|EG1|magicin
	Cytomap	4p15.32
	Type of gene	protein-coding
	Description	mediator of RNA polymerase II transcription subunit 28endothelial-derived gene 1endothelial-derived protein 1mediator of RNA polymerase II transcription, subunit 28 homologmerlin and Grb2-interacting cytoskeletal proteintumor angiogenesis marker EG-1
	Modification date	20200313
	UniProtAcc	Q9H204,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for MED28

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_1117988(17616014, +), ADediting_1117989(17616024, +), ADediting_1117990(17616025, +), ADediting_1117991(17616041, +), ADediting_1117992(17616061, +), ADediting_1117993(17616140, +), ADediting_1117998(17625755, +), ADediting_1117999(17626078, +), ADediting_1118000(17626083, +), ADediting_1118001(17626089, +), ADediting_1118002(17626094, +), ADediting_1118003(17626100, +), ADediting_1118004(17626108, +), ADediting_1118005(17626116, +), ADediting_1118006(17626117, +), ADediting_1118007(17626122, +), ADediting_1118008(17626125, +), ADediting_1118009(17626139, +), ADediting_1118010(17626143, +), ADediting_1118011(17626146, +), ADediting_1118012(17626148, +), ADediting_1118013(17626149, +), ADediting_1118014(17626157, +), ADediting_1118015(17626158, +), ADediting_1118016(17626169, +), ADediting_1118017(17626182, +), ADediting_1118018(17626186, +), ADediting_1118019(17626187, +), ADediting_1118020(17626228, +), ADediting_1118021(17626690, +), ADediting_1118022(17626918, +), ADediting_1118023(17626924, +), ADediting_1118024(17626925, +), ADediting_1118025(17626928, +), ADediting_1118026(17626942, +), ADediting_1118027(17626984, +), ADediting_1118028(17627012, +), ADediting_1118029(17627019, +), ADediting_1118030(17627027, +), ADediting_1118031(17627028, +), ADediting_1118032(17627038, +), ADediting_1118033(17627043, +), ADediting_1118034(17627044, +), ADediting_1118035(17627064, +), ADediting_1118036(17627068, +), ADediting_1118037(17627076, +), ADediting_1118038(17627114, +), ADediting_1118039(17627138, +), ADediting_1118040(17627141, +), ADediting_1118041(17627155, +), ADediting_1118042(17627214, +), ADediting_1118043(17627215, +), ADediting_1118044(17627227, +), ADediting_1118045(17627270, +), ADediting_1118046(17627271, +), ADediting_1118047(17627325, +), ADediting_1118048(17627351, +), ADediting_1118049(17627352, +), ADediting_1118050(17627355, +), ADediting_1118051(17627359, +), ADediting_1118052(17627364, +), ADediting_1118053(17627370, +), ADediting_1118054(17627386, +), ADediting_1118055(17627722, +), ADediting_1118056(17627731, +), ADediting_1118057(17627735, +), ADediting_1118058(17627749, +), ADediting_1118059(17627750, +), ADediting_1118060(17627754, +), ADediting_1118061(17627770, +), ADediting_1118062(17627774, +), ADediting_1118063(17627785, +), ADediting_1118064(17627789, +), ADediting_1118065(17627794, +), ADediting_1118066(17627799, +), ADediting_1118067(17627809, +), ADediting_1118068(17627811, +), ADediting_1118069(17627813, +), ADediting_1118070(17627816, +), ADediting_1118071(17627817, +), ADediting_1118072(17627819, +), ADediting_1118073(17627831, +), ADediting_1118074(17627832, +), ADediting_1118075(17627833, +), ADediting_1118076(17628930, +), ADediting_1118077(17629023, +), ADediting_1118078(17629028, +), ADediting_1118079(17629036, +), ADediting_1118080(17629042, +), ADediting_1118081(17629051, +), ADediting_1118082(17629052, +), ADediting_1118083(17629054, +), ADediting_1118084(17629060, +), ADediting_1118085(17629061, +), ADediting_1118086(17629062, +), ADediting_1118087(17629073, +), ADediting_1118088(17629076, +), ADediting_1118089(17629077, +), ADediting_1118090(17629082, +), ADediting_1118091(17629091, +), ADediting_1118092(17629112, +), ADediting_1118093(17629118, +), ADediting_1118094(17629122, +), ADediting_1118095(17629129, +), ADediting_1118096(17629135, +), ADediting_1118097(17629139, +), ADediting_1118098(17629153, +), ADediting_1118099(17629154, +), ADediting_1118100(17629161, +), ADediting_1118101(17629178, +), ADediting_1118102(17629198, +), ADediting_1118103(17629203, +), ADediting_1118104(17629215, +), ADediting_1118105(17629217, +), ADediting_1118106(17629220, +), ADediting_1118107(17629221, +), ADediting_1651256(17616060, +), ADediting_1651257(17617723, +), ADediting_1651258(17618098, +), ADediting_1651259(17626179, +), ADediting_1651260(17627063, +), ADediting_1651261(17627757, +),

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RNA editing positional annotations for MED28 using Annovar

Protein coding RNA editing(s).

ADeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_1117988	chr4_17616014_+	intronic
ADediting_1117989	chr4_17616024_+	intronic
ADediting_1117990	chr4_17616025_+	intronic
ADediting_1117991	chr4_17616041_+	intronic
ADediting_1117992	chr4_17616061_+	intronic
ADediting_1117993	chr4_17616140_+	intronic
ADediting_1117998	chr4_17625755_+	UTR3
ADediting_1117999	chr4_17626078_+	UTR3
ADediting_1118000	chr4_17626083_+	UTR3
ADediting_1118001	chr4_17626089_+	UTR3
ADediting_1118002	chr4_17626094_+	UTR3
ADediting_1118003	chr4_17626100_+	UTR3
ADediting_1118004	chr4_17626108_+	UTR3
ADediting_1118005	chr4_17626116_+	UTR3
ADediting_1118006	chr4_17626117_+	UTR3
ADediting_1118007	chr4_17626122_+	UTR3
ADediting_1118008	chr4_17626125_+	UTR3
ADediting_1118009	chr4_17626139_+	UTR3
ADediting_1118010	chr4_17626143_+	UTR3
ADediting_1118011	chr4_17626146_+	UTR3
ADediting_1118012	chr4_17626148_+	UTR3
ADediting_1118013	chr4_17626149_+	UTR3
ADediting_1118014	chr4_17626157_+	UTR3
ADediting_1118015	chr4_17626158_+	UTR3
ADediting_1118016	chr4_17626169_+	UTR3
ADediting_1118017	chr4_17626182_+	UTR3
ADediting_1118018	chr4_17626186_+	UTR3
ADediting_1118019	chr4_17626187_+	UTR3
ADediting_1118020	chr4_17626228_+	UTR3
ADediting_1118021	chr4_17626690_+	UTR3
ADediting_1118022	chr4_17626918_+	UTR3
ADediting_1118023	chr4_17626924_+	UTR3
ADediting_1118024	chr4_17626925_+	UTR3
ADediting_1118025	chr4_17626928_+	UTR3
ADediting_1118026	chr4_17626942_+	UTR3
ADediting_1118027	chr4_17626984_+	UTR3
ADediting_1118028	chr4_17627012_+	UTR3
ADediting_1118029	chr4_17627019_+	UTR3
ADediting_1118030	chr4_17627027_+	UTR3
ADediting_1118031	chr4_17627028_+	UTR3
ADediting_1118032	chr4_17627038_+	UTR3
ADediting_1118033	chr4_17627043_+	UTR3
ADediting_1118034	chr4_17627044_+	UTR3
ADediting_1118035	chr4_17627064_+	UTR3
ADediting_1118036	chr4_17627068_+	UTR3
ADediting_1118037	chr4_17627076_+	UTR3
ADediting_1118038	chr4_17627114_+	UTR3
ADediting_1118039	chr4_17627138_+	UTR3
ADediting_1118040	chr4_17627141_+	UTR3
ADediting_1118041	chr4_17627155_+	UTR3
ADediting_1118042	chr4_17627214_+	UTR3
ADediting_1118043	chr4_17627215_+	UTR3
ADediting_1118044	chr4_17627227_+	UTR3
ADediting_1118045	chr4_17627270_+	UTR3
ADediting_1118046	chr4_17627271_+	UTR3
ADediting_1118047	chr4_17627325_+	UTR3
ADediting_1118048	chr4_17627351_+	UTR3
ADediting_1118049	chr4_17627352_+	UTR3
ADediting_1118050	chr4_17627355_+	UTR3
ADediting_1118051	chr4_17627359_+	UTR3
ADediting_1118052	chr4_17627364_+	UTR3
ADediting_1118053	chr4_17627370_+	UTR3
ADediting_1118054	chr4_17627386_+	UTR3
ADediting_1118055	chr4_17627722_+	UTR3
ADediting_1118056	chr4_17627731_+	UTR3
ADediting_1118057	chr4_17627735_+	UTR3
ADediting_1118058	chr4_17627749_+	UTR3
ADediting_1118059	chr4_17627750_+	UTR3
ADediting_1118060	chr4_17627754_+	UTR3
ADediting_1118061	chr4_17627770_+	UTR3
ADediting_1118062	chr4_17627774_+	UTR3
ADediting_1118063	chr4_17627785_+	UTR3
ADediting_1118064	chr4_17627789_+	UTR3
ADediting_1118065	chr4_17627794_+	UTR3
ADediting_1118066	chr4_17627799_+	UTR3
ADediting_1118067	chr4_17627809_+	UTR3
ADediting_1118068	chr4_17627811_+	UTR3
ADediting_1118069	chr4_17627813_+	UTR3
ADediting_1118070	chr4_17627816_+	UTR3
ADediting_1118071	chr4_17627817_+	UTR3
ADediting_1118072	chr4_17627819_+	UTR3
ADediting_1118073	chr4_17627831_+	UTR3
ADediting_1118074	chr4_17627832_+	UTR3
ADediting_1118075	chr4_17627833_+	UTR3
ADediting_1118076	chr4_17628930_+	UTR3
ADediting_1118077	chr4_17629023_+	UTR3
ADediting_1118078	chr4_17629028_+	UTR3
ADediting_1118079	chr4_17629036_+	UTR3
ADediting_1118080	chr4_17629042_+	UTR3
ADediting_1118081	chr4_17629051_+	UTR3
ADediting_1118082	chr4_17629052_+	UTR3
ADediting_1118083	chr4_17629054_+	UTR3
ADediting_1118084	chr4_17629060_+	UTR3
ADediting_1118085	chr4_17629061_+	UTR3
ADediting_1118086	chr4_17629062_+	UTR3
ADediting_1118087	chr4_17629073_+	UTR3
ADediting_1118088	chr4_17629076_+	UTR3
ADediting_1118089	chr4_17629077_+	UTR3
ADediting_1118090	chr4_17629082_+	UTR3
ADediting_1118091	chr4_17629091_+	UTR3
ADediting_1118092	chr4_17629112_+	UTR3
ADediting_1118093	chr4_17629118_+	UTR3
ADediting_1118094	chr4_17629122_+	UTR3
ADediting_1118095	chr4_17629129_+	UTR3
ADediting_1118096	chr4_17629135_+	UTR3
ADediting_1118097	chr4_17629139_+	UTR3
ADediting_1118098	chr4_17629153_+	UTR3
ADediting_1118099	chr4_17629154_+	UTR3
ADediting_1118100	chr4_17629161_+	UTR3
ADediting_1118101	chr4_17629178_+	UTR3
ADediting_1118102	chr4_17629198_+	UTR3
ADediting_1118103	chr4_17629203_+	UTR3
ADediting_1118104	chr4_17629215_+	UTR3
ADediting_1118105	chr4_17629217_+	UTR3
ADediting_1118106	chr4_17629220_+	UTR3
ADediting_1118107	chr4_17629221_+	UTR3
ADediting_1651256	chr4_17616060_+	intronic
ADediting_1651257	chr4_17617723_+	intronic
ADediting_1651258	chr4_17618098_+	intronic
ADediting_1651259	chr4_17626179_+	UTR3
ADediting_1651260	chr4_17627063_+	UTR3
ADediting_1651261	chr4_17627757_+	UTR3

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_1117988	chr4_17616014_+	SINE	Alu	Name=AluSg4
ADediting_1117989	chr4_17616024_+	SINE	Alu	Name=AluSg4
ADediting_1117990	chr4_17616025_+	SINE	Alu	Name=AluSg4
ADediting_1117991	chr4_17616041_+	SINE	Alu	Name=AluSg4
ADediting_1117992	chr4_17616061_+	SINE	Alu	Name=AluSg4
ADediting_1117993	chr4_17616140_+	SINE	Alu	Name=AluSg4
ADediting_1117999	chr4_17626078_+	SINE	MIR	Name=MIR
ADediting_1118002	chr4_17626094_+	SINE	Alu	Name=AluSp
ADediting_1118003	chr4_17626100_+	SINE	Alu	Name=AluSp
ADediting_1118004	chr4_17626108_+	SINE	Alu	Name=AluSp
ADediting_1118005	chr4_17626116_+	SINE	Alu	Name=AluSp
ADediting_1118006	chr4_17626117_+	SINE	Alu	Name=AluSp
ADediting_1118007	chr4_17626122_+	SINE	Alu	Name=AluSp
ADediting_1118008	chr4_17626125_+	SINE	Alu	Name=AluSp
ADediting_1118009	chr4_17626139_+	SINE	Alu	Name=AluSp
ADediting_1118010	chr4_17626143_+	SINE	Alu	Name=AluSp
ADediting_1118011	chr4_17626146_+	SINE	Alu	Name=AluSp
ADediting_1118012	chr4_17626148_+	SINE	Alu	Name=AluSp
ADediting_1118013	chr4_17626149_+	SINE	Alu	Name=AluSp
ADediting_1118014	chr4_17626157_+	SINE	Alu	Name=AluSp
ADediting_1118015	chr4_17626158_+	SINE	Alu	Name=AluSp
ADediting_1118016	chr4_17626169_+	SINE	Alu	Name=AluSp
ADediting_1118017	chr4_17626182_+	SINE	Alu	Name=AluSp
ADediting_1118018	chr4_17626186_+	SINE	Alu	Name=AluSp
ADediting_1118019	chr4_17626187_+	SINE	Alu	Name=AluSp
ADediting_1118020	chr4_17626228_+	SINE	Alu	Name=AluSp
ADediting_1118021	chr4_17626690_+	SINE	Alu	Name=AluYj4
ADediting_1118022	chr4_17626918_+	SINE	Alu	Name=AluSz
ADediting_1118023	chr4_17626924_+	SINE	Alu	Name=AluSz
ADediting_1118024	chr4_17626925_+	SINE	Alu	Name=AluSz
ADediting_1118025	chr4_17626928_+	SINE	Alu	Name=AluSz
ADediting_1118026	chr4_17626942_+	SINE	Alu	Name=AluSz
ADediting_1118027	chr4_17626984_+	SINE	Alu	Name=AluSc
ADediting_1118028	chr4_17627012_+	SINE	Alu	Name=AluSc
ADediting_1118029	chr4_17627019_+	SINE	Alu	Name=AluSc
ADediting_1118030	chr4_17627027_+	SINE	Alu	Name=AluSc
ADediting_1118031	chr4_17627028_+	SINE	Alu	Name=AluSc
ADediting_1118032	chr4_17627038_+	SINE	Alu	Name=AluSc
ADediting_1118033	chr4_17627043_+	SINE	Alu	Name=AluSc
ADediting_1118034	chr4_17627044_+	SINE	Alu	Name=AluSc
ADediting_1118035	chr4_17627064_+	SINE	Alu	Name=AluSc
ADediting_1118036	chr4_17627068_+	SINE	Alu	Name=AluSc
ADediting_1118037	chr4_17627076_+	SINE	Alu	Name=AluSc
ADediting_1118038	chr4_17627114_+	SINE	Alu	Name=AluSc
ADediting_1118039	chr4_17627138_+	SINE	Alu	Name=AluSc
ADediting_1118040	chr4_17627141_+	SINE	Alu	Name=AluSc
ADediting_1118041	chr4_17627155_+	SINE	Alu	Name=AluSc
ADediting_1118042	chr4_17627214_+	SINE	Alu	Name=AluSc
ADediting_1118043	chr4_17627215_+	SINE	Alu	Name=AluSc
ADediting_1118044	chr4_17627227_+	SINE	Alu	Name=AluSc
ADediting_1118045	chr4_17627270_+	SINE	Alu	Name=AluSz
ADediting_1118046	chr4_17627271_+	SINE	Alu	Name=AluSz
ADediting_1118047	chr4_17627325_+	SINE	Alu	Name=AluSz
ADediting_1118048	chr4_17627351_+	SINE	Alu	Name=AluSz
ADediting_1118049	chr4_17627352_+	SINE	Alu	Name=AluSz
ADediting_1118050	chr4_17627355_+	SINE	Alu	Name=AluSz
ADediting_1118051	chr4_17627359_+	SINE	Alu	Name=AluSz
ADediting_1118052	chr4_17627364_+	SINE	Alu	Name=AluSz
ADediting_1118053	chr4_17627370_+	SINE	Alu	Name=AluSz
ADediting_1118054	chr4_17627386_+	SINE	Alu	Name=AluSz
ADediting_1118055	chr4_17627722_+	SINE	Alu	Name=AluSx3
ADediting_1118056	chr4_17627731_+	SINE	Alu	Name=AluSx3
ADediting_1118057	chr4_17627735_+	SINE	Alu	Name=AluSx3
ADediting_1118058	chr4_17627749_+	SINE	Alu	Name=AluSx3
ADediting_1118059	chr4_17627750_+	SINE	Alu	Name=AluSx3
ADediting_1118060	chr4_17627754_+	SINE	Alu	Name=AluSx3
ADediting_1118061	chr4_17627770_+	SINE	Alu	Name=AluSx3
ADediting_1118062	chr4_17627774_+	SINE	Alu	Name=AluSx3
ADediting_1118063	chr4_17627785_+	SINE	Alu	Name=AluSx3
ADediting_1118064	chr4_17627789_+	SINE	Alu	Name=AluSx3
ADediting_1118065	chr4_17627794_+	SINE	Alu	Name=AluSx3
ADediting_1118066	chr4_17627799_+	SINE	Alu	Name=AluSx3
ADediting_1118067	chr4_17627809_+	SINE	Alu	Name=AluSx3
ADediting_1118068	chr4_17627811_+	SINE	Alu	Name=AluSx3
ADediting_1118069	chr4_17627813_+	SINE	Alu	Name=AluSx3
ADediting_1118070	chr4_17627816_+	SINE	Alu	Name=AluSx3
ADediting_1118071	chr4_17627817_+	SINE	Alu	Name=AluSx3
ADediting_1118072	chr4_17627819_+	SINE	Alu	Name=AluSx3
ADediting_1118073	chr4_17627831_+	SINE	Alu	Name=AluSx3
ADediting_1118074	chr4_17627832_+	SINE	Alu	Name=AluSx3
ADediting_1118075	chr4_17627833_+	SINE	Alu	Name=AluSx3
ADediting_1118076	chr4_17628930_+	LTR	ERVL	Name=ERV3-16A3_I-int
ADediting_1118077	chr4_17629023_+	SINE	Alu	Name=AluSx1
ADediting_1118078	chr4_17629028_+	SINE	Alu	Name=AluSx1
ADediting_1118079	chr4_17629036_+	SINE	Alu	Name=AluSx1
ADediting_1118080	chr4_17629042_+	SINE	Alu	Name=AluSx1
ADediting_1118081	chr4_17629051_+	SINE	Alu	Name=AluSx1
ADediting_1118082	chr4_17629052_+	SINE	Alu	Name=AluSx1
ADediting_1118083	chr4_17629054_+	SINE	Alu	Name=AluSx1
ADediting_1118084	chr4_17629060_+	SINE	Alu	Name=AluSx1
ADediting_1118085	chr4_17629061_+	SINE	Alu	Name=AluSx1
ADediting_1118086	chr4_17629062_+	SINE	Alu	Name=AluSx1
ADediting_1118087	chr4_17629073_+	SINE	Alu	Name=AluSx1
ADediting_1118088	chr4_17629076_+	SINE	Alu	Name=AluSx1
ADediting_1118089	chr4_17629077_+	SINE	Alu	Name=AluSx1
ADediting_1118090	chr4_17629082_+	SINE	Alu	Name=AluSx1
ADediting_1118091	chr4_17629091_+	SINE	Alu	Name=AluSx1
ADediting_1118092	chr4_17629112_+	SINE	Alu	Name=AluSx1
ADediting_1118093	chr4_17629118_+	SINE	Alu	Name=AluSx1
ADediting_1118094	chr4_17629122_+	SINE	Alu	Name=AluSx1
ADediting_1118095	chr4_17629129_+	SINE	Alu	Name=AluSx1
ADediting_1118096	chr4_17629135_+	SINE	Alu	Name=AluSx1
ADediting_1118097	chr4_17629139_+	SINE	Alu	Name=AluSx1
ADediting_1118098	chr4_17629153_+	SINE	Alu	Name=AluSx1
ADediting_1118099	chr4_17629154_+	SINE	Alu	Name=AluSx1
ADediting_1118100	chr4_17629161_+	SINE	Alu	Name=AluSx1
ADediting_1118101	chr4_17629178_+	SINE	Alu	Name=AluSx1
ADediting_1118102	chr4_17629198_+	SINE	Alu	Name=AluSx1
ADediting_1118103	chr4_17629203_+	SINE	Alu	Name=AluSx1
ADediting_1118104	chr4_17629215_+	SINE	Alu	Name=AluSx1
ADediting_1118105	chr4_17629217_+	SINE	Alu	Name=AluSx1
ADediting_1118106	chr4_17629220_+	SINE	Alu	Name=AluSx1
ADediting_1118107	chr4_17629221_+	SINE	Alu	Name=AluSx1
ADediting_1651256	chr4_17616060_+	SINE	Alu	Name=AluSg4
ADediting_1651257	chr4_17617723_+	SINE	Alu	Name=AluSz
ADediting_1651258	chr4_17618098_+	SINE	Alu	Name=AluJb
ADediting_1651259	chr4_17626179_+	SINE	Alu	Name=AluSp
ADediting_1651260	chr4_17627063_+	SINE	Alu	Name=AluSc
ADediting_1651261	chr4_17627757_+	SINE	Alu	Name=AluSx3

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RNA A-to-I editing events in the alternative splicing sites for MED28

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for MED28

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

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Protein coding region RNA A-to-I editings for MED28

- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for MED28

RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1117998	chr4_17625755_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4438	chr4	17625753	17625759	7mer-m8	17625740	17625760	145	-16.9
ADediting_1117998	chr4_17625755_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6815-3p	chr4	17625750	17625756	7mer-m8	17625737	17625757	140	-12.67
ADediting_1117999	chr4_17626078_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4287	chr4	17626075	17626082	8mer-1a	17626064	17626082	146	-19.62
ADediting_1117999	chr4_17626078_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4685-3p	chr4	17626075	17626082	8mer-1a	17626059	17626082	144	-19.49
ADediting_1117999	chr4_17626078_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6867-3p	chr4	17626076	17626082	7mer-m8	17626063	17626083	140	-11.02
ADediting_1118000	chr4_17626083_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1306-5p	chr4	17626078	17626084	7mer-m8	17626059	17626085	146	-17.01
ADediting_1118001	chr4_17626089_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5699-5p	chr4	17626085	17626091	7mer-m8	17626071	17626092	150	-16.65
ADediting_1118001	chr4_17626089_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6793-3p	chr4	17626084	17626090	7mer-m8	17626072	17626091	146	-17.93
ADediting_1118001	chr4_17626089_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-874-5p	chr4	17626086	17626093	8mer-1a	17626072	17626093	144	-18.13
ADediting_1118002	chr4_17626094_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-941	chr4	17626090	17626096	7mer-m8	17626078	17626097	145	-23.23
ADediting_1118004	chr4_17626108_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4634	chr4	17626105	17626111	7mer-m8	17626094	17626112	145	-20.24
ADediting_1118005	chr4_17626116_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-513a-5p	chr4	17626110	17626116	7mer-m8	17626100	17626117	144	-16.68
ADediting_1118005	chr4_17626116_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-638	chr4	17626115	17626121	7mer-1a	17626097	17626121	157	-32.92
ADediting_1118006	chr4_17626117_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-8052	chr4	17626115	17626121	7mer-1a	17626103	17626121	140	-24.15
ADediting_1118007	chr4_17626122_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-371a-3p	chr4	17626120	17626126	7mer-m8	17626105	17626127	145	-17.36
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-518a-3p	chr4	17626122	17626128	7mer-m8	17626108	17626129	145	-17.15
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-518b	chr4	17626122	17626128	7mer-m8	17626109	17626129	146	-21.79
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-518c-3p	chr4	17626122	17626128	7mer-m8	17626108	17626129	146	-18.98
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-518d-3p	chr4	17626122	17626128	7mer-m8	17626109	17626129	145	-17.84
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-518e-3p	chr4	17626121	17626127	7mer-m8	17626107	17626128	144	-18.65
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-518f-3p	chr4	17626122	17626128	7mer-m8	17626109	17626129	145	-17.48
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-526a-3p	chr4	17626122	17626128	7mer-m8	17626109	17626129	146	-17.71
ADediting_1118009	chr4_17626139_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1913	chr4	17626137	17626143	7mer-m8	17626117	17626144	149	-29.3
ADediting_1118011	chr4_17626146_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6752-3p	chr4	17626139	17626145	7mer-m8	17626127	17626146	153	-29.36
ADediting_1118011	chr4_17626146_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6801-3p	chr4	17626140	17626147	8mer-1a	17626128	17626147	147	-22.46
ADediting_1118011	chr4_17626146_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6810-3p	chr4	17626140	17626147	8mer-1a	17626127	17626147	154	-34.27
ADediting_1118012	chr4_17626148_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-660-3p	chr4	17626141	17626148	8mer-1a	17626129	17626148	144	-16.11
ADediting_1118013	chr4_17626149_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4431	chr4	17626145	17626151	7mer-m8	17626131	17626152	140	-17.94
ADediting_1118014	chr4_17626157_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-9900	chr4	17626155	17626161	7mer-m8	17626143	17626162	155	-17.58
ADediting_1118015	chr4_17626158_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3155a	chr4	17626155	17626161	7mer-m8	17626141	17626162	141	-23.88
ADediting_1118015	chr4_17626158_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3155b	chr4	17626155	17626161	7mer-m8	17626144	17626162	141	-22.98
ADediting_1118015	chr4_17626158_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-484	chr4	17626155	17626161	7mer-m8	17626141	17626162	151	-23.09
ADediting_1118016	chr4_17626169_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1281	chr4	17626162	17626168	7mer-m8	17626153	17626169	141	-17.01
ADediting_1118018	chr4_17626186_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4638-5p	chr4	17626181	17626188	8mer-1a	17626171	17626188	142	-17.56
ADediting_1118019	chr4_17626187_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-149-5p	chr4	17626180	17626186	7mer-m8	17626163	17626187	148	-22.26
ADediting_1118020	chr4_17626228_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6837-3p	chr4	17626221	17626227	7mer-m8	17626203	17626228	144	-15.01
ADediting_1118021	chr4_17626690_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4433b-5p	chr4	17626687	17626693	7mer-m8	17626674	17626694	140	-10.81
ADediting_1118022	chr4_17626918_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-331-3p	chr4	17626913	17626919	7mer-m8	17626900	17626920	145	-20.4
ADediting_1118022	chr4_17626918_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4292	chr4	17626912	17626918	7mer-m8	17626903	17626919	143	-25.33
ADediting_1118022	chr4_17626918_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6771-3p	chr4	17626916	17626923	8mer-1a	17626903	17626923	150	-18.99
ADediting_1118022	chr4_17626918_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6791-5p	chr4	17626912	17626918	7mer-m8	17626901	17626919	152	-34.32
ADediting_1118023	chr4_17626924_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-371a-5p	chr4	17626919	17626925	7mer-m8	17626905	17626926	164	-24.41
ADediting_1118023	chr4_17626924_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6715b-3p	chr4	17626918	17626924	7mer-m8	17626905	17626925	145	-18.64
ADediting_1118023	chr4_17626924_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-767-3p	chr4	17626922	17626928	7mer-m8	17626908	17626929	160	-20.54
ADediting_1118026	chr4_17626942_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6089	chr4	17626940	17626946	7mer-m8	17626924	17626947	164	-37.06
ADediting_1118027	chr4_17626984_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4733-5p	chr4	17626980	17626986	7mer-m8	17626966	17626987	143	-8.3
ADediting_1118028	chr4_17627012_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3145-5p	chr4	17627009	17627015	7mer-m8	17626995	17627016	142	-9.22
ADediting_1118031	chr4_17627028_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3130-3p	chr4	17627021	17627027	7mer-m8	17627007	17627028	146	-17.65
ADediting_1118031	chr4_17627028_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-873-3p	chr4	17627025	17627031	7mer-m8	17627010	17627032	145	-14.96
ADediting_1118034	chr4_17627044_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-17-3p	chr4	17627037	17627043	7mer-m8	17627023	17627044	150	-18.24
ADediting_1118034	chr4_17627044_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-485-5p	chr4	17627041	17627047	7mer-m8	17627028	17627048	153	-20.87
ADediting_1118034	chr4_17627044_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6884-5p	chr4	17627041	17627047	7mer-m8	17627025	17627048	150	-25.7
ADediting_1118036	chr4_17627068_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-606	chr4	17627063	17627069	7mer-m8	17627050	17627070	147	-11.91
ADediting_1118038	chr4_17627114_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-143-5p	chr4	17627110	17627116	7mer-m8	17627096	17627117	160	-26.91
ADediting_1118042	chr4_17627214_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-2276-5p	chr4	17627211	17627217	7mer-m8	17627200	17627218	144	-21.29
ADediting_1118042	chr4_17627214_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-326	chr4	17627209	17627215	7mer-m8	17627197	17627216	140	-18.72
ADediting_1118042	chr4_17627214_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-330-5p	chr4	17627209	17627215	7mer-m8	17627195	17627216	140	-21.18
ADediting_1118042	chr4_17627214_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4314	chr4	17627208	17627214	7mer-m8	17627198	17627215	142	-19.99
ADediting_1118043	chr4_17627215_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3189-3p	chr4	17627209	17627215	7mer-m8	17627196	17627216	141	-28.83
ADediting_1118043	chr4_17627215_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6769a-3p	chr4	17627213	17627219	7mer-m8	17627200	17627220	140	-14.88
ADediting_1118047	chr4_17627325_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3622a-3p	chr4	17627321	17627328	8mer-1a	17627307	17627328	144	-13.55
ADediting_1118047	chr4_17627325_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3622b-3p	chr4	17627321	17627328	8mer-1a	17627308	17627328	153	-19.33
ADediting_1118047	chr4_17627325_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-544b	chr4	17627319	17627325	7mer-m8	17627306	17627326	157	-19.04
ADediting_1118047	chr4_17627325_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-7162-3p	chr4	17627318	17627324	7mer-m8	17627305	17627325	142	-17.47
ADediting_1118048	chr4_17627351_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-326	chr4	17627346	17627352	7mer-m8	17627334	17627353	140	-13.25
ADediting_1118048	chr4_17627351_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-330-5p	chr4	17627346	17627352	7mer-m8	17627330	17627353	143	-20.01
ADediting_1118048	chr4_17627351_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4314	chr4	17627345	17627351	7mer-m8	17627334	17627352	143	-20.84
ADediting_1118048	chr4_17627351_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-514a-5p	chr4	17627347	17627354	8mer-1a	17627331	17627354	150	-18.93
ADediting_1118049	chr4_17627352_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3189-3p	chr4	17627346	17627352	7mer-m8	17627331	17627353	153	-24.1
ADediting_1118049	chr4_17627352_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6813-3p	chr4	17627347	17627354	8mer-1a	17627334	17627354	140	-10.65
ADediting_1118050	chr4_17627355_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-383-3p	chr4	17627351	17627358	8mer-1a	17627340	17627358	140	-14.58
ADediting_1118051	chr4_17627359_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4712-5p	chr4	17627352	17627358	7mer-m8	17627338	17627359	140	-14.66
ADediting_1118051	chr4_17627359_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-770-5p	chr4	17627352	17627358	7mer-m8	17627337	17627359	140	-18.17
ADediting_1118054	chr4_17627386_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6781-5p	chr4	17627383	17627390	8mer-1a	17627371	17627390	141	-22.71
ADediting_1118056	chr4_17627731_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1913	chr4	17627729	17627735	7mer-m8	17627715	17627736	156	-32.25
ADediting_1118056	chr4_17627731_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6849-3p	chr4	17627724	17627730	7mer-m8	17627706	17627731	149	-27.04
ADediting_1118059	chr4_17627750_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-10400-3p	chr4	17627747	17627753	7mer-m8	17627735	17627754	141	-23.04
ADediting_1118059	chr4_17627750_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4437	chr4	17627746	17627753	8mer-1a	17627733	17627753	146	-19.59
ADediting_1118059	chr4_17627750_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4674	chr4	17627747	17627753	7mer-m8	17627735	17627754	148	-24.84
ADediting_1118062	chr4_17627774_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-324-3p	chr4	17627767	17627773	7mer-m8	17627748	17627774	145	-27.14
ADediting_1118062	chr4_17627774_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6075	chr4	17627771	17627778	8mer-1a	17627757	17627778	148	-22
ADediting_1118063	chr4_17627785_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1538	chr4	17627782	17627788	7mer-1a	17627763	17627788	141	-24.37
ADediting_1118063	chr4_17627785_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4745-3p	chr4	17627782	17627788	7mer-1a	17627766	17627788	149	-29.14
ADediting_1118063	chr4_17627785_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-663b	chr4	17627783	17627789	7mer-m8	17627769	17627790	160	-25.2
ADediting_1118066	chr4_17627799_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4743-5p	chr4	17627795	17627801	7mer-m8	17627783	17627802	147	-24.78
ADediting_1118067	chr4_17627809_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4715-3p	chr4	17627804	17627810	7mer-m8	17627789	17627811	154	-20.01
ADediting_1118067	chr4_17627809_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4727-5p	chr4	17627806	17627812	7mer-m8	17627793	17627813	143	-18.72
ADediting_1118067	chr4_17627809_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6817-5p	chr4	17627806	17627812	7mer-1a	17627791	17627812	143	-30.67
ADediting_1118069	chr4_17627813_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-10a-5p	chr4	17627808	17627815	8mer-1a	17627794	17627815	147	-22.42
ADediting_1118069	chr4_17627813_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-10b-5p	chr4	17627808	17627815	8mer-1a	17627795	17627815	146	-21.2
ADediting_1118069	chr4_17627813_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-339-5p	chr4	17627807	17627813	7mer-m8	17627792	17627814	163	-28.5
ADediting_1118070	chr4_17627816_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6794-3p	chr4	17627810	17627816	7mer-m8	17627800	17627817	150	-20.62
ADediting_1118073	chr4_17627831_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-526b-5p	chr4	17627825	17627832	8mer-1a	17627810	17627832	162	-17.56
ADediting_1118076	chr4_17628930_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6509-3p	chr4	17628925	17628931	7mer-m8	17628912	17628932	143	-15.96
ADediting_1118076	chr4_17628930_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6760-3p	chr4	17628923	17628929	7mer-m8	17628910	17628930	145	-16.4
ADediting_1118077	chr4_17629023_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-186-3p	chr4	17629017	17629023	7mer-m8	17629004	17629024	152	-20.23
ADediting_1118082	chr4_17629052_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3190-5p	chr4	17629045	17629051	7mer-m8	17629033	17629052	152	-19.06
ADediting_1118083	chr4_17629054_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1306-3p	chr4	17629047	17629053	7mer-m8	17629037	17629054	152	-23.71
ADediting_1118084	chr4_17629060_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-23a-5p	chr4	17629058	17629064	7mer-m8	17629043	17629065	144	-18.5
ADediting_1118084	chr4_17629060_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-23b-5p	chr4	17629058	17629064	7mer-m8	17629045	17629065	156	-20.46
ADediting_1118085	chr4_17629061_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1182	chr4	17629059	17629065	7mer-m8	17629044	17629066	143	-14.91
ADediting_1118085	chr4_17629061_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1229-3p	chr4	17629055	17629061	7mer-m8	17629038	17629062	146	-16.14
ADediting_1118085	chr4_17629061_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6511a-3p	chr4	17629054	17629061	8mer-1a	17629040	17629061	145	-15.78
ADediting_1118085	chr4_17629061_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6511b-3p	chr4	17629054	17629061	8mer-1a	17629039	17629061	140	-14.97
ADediting_1118086	chr4_17629062_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3158-3p	chr4	17629059	17629065	7mer-m8	17629046	17629066	150	-20.06
ADediting_1118086	chr4_17629062_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-412-3p	chr4	17629055	17629061	7mer-m8	17629040	17629062	153	-17.3
ADediting_1118086	chr4_17629062_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6754-3p	chr4	17629055	17629061	7mer-m8	17629042	17629062	144	-15.76
ADediting_1118087	chr4_17629073_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-374b-3p	chr4	17629070	17629077	8mer-1a	17629052	17629077	146	-14.59
ADediting_1118088	chr4_17629076_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-222-5p	chr4	17629070	17629077	8mer-1a	17629054	17629077	146	-14.38
ADediting_1118088	chr4_17629076_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-30a-3p	chr4	17629072	17629079	8mer-1a	17629055	17629079	150	-10.49
ADediting_1118088	chr4_17629076_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-30d-3p	chr4	17629072	17629079	8mer-1a	17629054	17629079	147	-10.55
ADediting_1118088	chr4_17629076_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-30e-3p	chr4	17629072	17629079	8mer-1a	17629055	17629079	150	-11.75
ADediting_1118088	chr4_17629076_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-936	chr4	17629069	17629076	8mer-1a	17629054	17629076	159	-26.12
ADediting_1118089	chr4_17629077_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-325	chr4	17629070	17629077	8mer-1a	17629055	17629077	141	-12.77
ADediting_1118090	chr4_17629082_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-153-5p	chr4	17629075	17629081	7mer-m8	17629062	17629082	146	-9.95
ADediting_1118090	chr4_17629082_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5700	chr4	17629079	17629086	8mer-1a	17629067	17629086	149	-10.03
ADediting_1118090	chr4_17629082_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-586	chr4	17629078	17629084	7mer-m8	17629066	17629085	147	-10.83
ADediting_1118091	chr4_17629091_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-192-3p	chr4	17629087	17629093	7mer-m8	17629073	17629094	145	-8.32
ADediting_1118092	chr4_17629112_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-140-3p	chr4	17629107	17629113	7mer-m8	17629094	17629114	147	-21.2
ADediting_1118094	chr4_17629122_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1207-3p	chr4	17629115	17629121	7mer-m8	17629104	17629122	145	-13.53
ADediting_1118094	chr4_17629122_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-646	chr4	17629117	17629123	7mer-m8	17629105	17629124	148	-21.05
ADediting_1118095	chr4_17629129_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3943	chr4	17629126	17629132	7mer-m8	17629113	17629133	150	-22.28
ADediting_1118096	chr4_17629135_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1913	chr4	17629133	17629139	7mer-m8	17629119	17629140	147	-24.36
ADediting_1118096	chr4_17629135_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6849-3p	chr4	17629128	17629134	7mer-m8	17629114	17629135	140	-15.93
ADediting_1118099	chr4_17629154_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4437	chr4	17629150	17629156	7mer-m8	17629137	17629157	146	-19.53
ADediting_1118100	chr4_17629161_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-10392-3p	chr4	17629159	17629166	8mer-1a	17629145	17629166	147	-23.36
ADediting_1118100	chr4_17629161_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5587-3p	chr4	17629154	17629160	7mer-m8	17629140	17629161	150	-24.92
ADediting_1118100	chr4_17629161_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6840-5p	chr4	17629155	17629161	7mer-m8	17629132	17629162	149	-32.3
ADediting_1118101	chr4_17629178_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-324-3p	chr4	17629171	17629177	7mer-m8	17629155	17629178	146	-31.74
ADediting_1118101	chr4_17629178_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4690-3p	chr4	17629175	17629182	8mer-1a	17629163	17629182	165	-27.18
ADediting_1118101	chr4_17629178_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5685	chr4	17629175	17629182	8mer-1a	17629162	17629182	154	-22.83
ADediting_1118105	chr4_17629217_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-339-5p	chr4	17629211	17629217	7mer-m8	17629198	17629218	160	-24.95
ADediting_1118105	chr4_17629217_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-874-3p	chr4	17629213	17629220	8mer-1a	17629197	17629220	154	-25.5
ADediting_1118107	chr4_17629221_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6838-3p	chr4	17629218	17629224	7mer-m8	17629207	17629225	168	-24.31
ADediting_1651259	chr4_17626179_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-197-3p	chr4	17626175	17626181	7mer-m8	17626158	17626182	166	-31.72
ADediting_1651261	chr4_17627757_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-331-3p	chr4	17627751	17627757	7mer-m8	17627738	17627758	146	-20.27
ADediting_1651261	chr4_17627757_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4292	chr4	17627750	17627756	7mer-m8	17627740	17627757	140	-21.97
ADediting_1651261	chr4_17627757_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4640-3p	chr4	17627753	17627759	7mer-m8	17627739	17627760	154	-23.23
ADediting_1651261	chr4_17627757_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6791-5p	chr4	17627750	17627756	7mer-m8	17627736	17627757	147	-31.8

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1118002	chr4_17626094_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3176	chr4	17626088	17626094	7mer-m8	17626077	17626095	140	-18.05
ADediting_1118002	chr4_17626094_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6765-3p	chr4	17626091	17626097	7mer-m8	17626078	17626098	146	-19.05
ADediting_1118002	chr4_17626094_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6804-3p	chr4	17626092	17626099	8mer-1a	17626079	17626099	155	-20.17
ADediting_1118003	chr4_17626100_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3130-3p	chr4	17626094	17626100	7mer-m8	17626082	17626101	145	-21.6
ADediting_1118003	chr4_17626100_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4252	chr4	17626098	17626104	7mer-m8	17626087	17626105	146	-17.81
ADediting_1118003	chr4_17626100_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-500a-3p	chr4	17626093	17626099	7mer-m8	17626077	17626100	155	-23.34
ADediting_1118004	chr4_17626108_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6807-5p	chr4	17626101	17626107	7mer-m8	17626086	17626108	152	-24.01
ADediting_1118005	chr4_17626116_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-10399-5p	chr4	17626111	17626117	7mer-m8	17626097	17626118	144	-10.39
ADediting_1118005	chr4_17626116_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6504-3p	chr4	17626111	17626117	7mer-m8	17626097	17626118	152	-15.11
ADediting_1118005	chr4_17626116_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-7151-3p	chr4	17626109	17626116	8mer-1a	17626096	17626116	144	-16.51
ADediting_1118006	chr4_17626117_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-10399-5p	chr4	17626111	17626117	7mer-m8	17626097	17626118	144	-10.39
ADediting_1118006	chr4_17626117_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5089-5p	chr4	17626115	17626121	7mer-m8	17626100	17626122	148	-14.13
ADediting_1118006	chr4_17626117_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6504-3p	chr4	17626111	17626117	7mer-m8	17626097	17626118	152	-15.11
ADediting_1118007	chr4_17626122_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5089-5p	chr4	17626115	17626121	7mer-m8	17626100	17626122	148	-14.13
ADediting_1118007	chr4_17626122_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-512-3p	chr4	17626120	17626126	7mer-m8	17626106	17626127	149	-15.51
ADediting_1118007	chr4_17626122_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6506-5p	chr4	17626116	17626122	7mer-m8	17626101	17626123	144	-13.78
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-302a-3p	chr4	17626121	17626127	7mer-m8	17626107	17626128	143	-14.98
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-302b-3p	chr4	17626121	17626127	7mer-m8	17626106	17626128	141	-9.83
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-302c-3p	chr4	17626121	17626127	7mer-m8	17626108	17626128	145	-11.96
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-302d-3p	chr4	17626121	17626127	7mer-m8	17626101	17626128	148	-13.74
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-302e	chr4	17626121	17626127	7mer-m8	17626112	17626128	141	-8.62
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-372-3p	chr4	17626121	17626127	7mer-m8	17626101	17626128	155	-20.46
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-512-3p	chr4	17626120	17626126	7mer-m8	17626106	17626127	149	-15.51
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-519d-3p	chr4	17626122	17626128	7mer-m8	17626109	17626129	146	-14.53
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-520a-3p	chr4	17626121	17626127	7mer-m8	17626107	17626128	140	-11.03
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-520b-3p	chr4	17626121	17626127	7mer-m8	17626109	17626128	141	-16.52
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-520c-3p	chr4	17626121	17626127	7mer-m8	17626108	17626128	146	-16.52
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-520d-3p	chr4	17626121	17626127	7mer-m8	17626107	17626128	140	-15.12
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-520e-3p	chr4	17626121	17626127	7mer-m8	17626108	17626128	140	-13.32
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-520g-3p	chr4	17626123	17626129	7mer-m8	17626108	17626130	151	-16.77
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-520h	chr4	17626123	17626129	7mer-m8	17626109	17626130	150	-15.08
ADediting_1118008	chr4_17626125_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-526b-3p	chr4	17626122	17626128	7mer-m8	17626109	17626129	146	-16.66
ADediting_1118010	chr4_17626143_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1976	chr4	17626140	17626147	8mer-1a	17626129	17626147	146	-20.86
ADediting_1118010	chr4_17626143_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6747-3p	chr4	17626138	17626145	8mer-1a	17626124	17626145	148	-23.23
ADediting_1118011	chr4_17626146_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1976	chr4	17626140	17626147	8mer-1a	17626129	17626147	146	-20.86
ADediting_1118014	chr4_17626157_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-498-5p	chr4	17626151	17626157	7mer-m8	17626136	17626158	142	-9.71
ADediting_1118015	chr4_17626158_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-498-5p	chr4	17626151	17626157	7mer-m8	17626136	17626158	142	-9.71
ADediting_1118016	chr4_17626169_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6836-3p	chr4	17626162	17626168	7mer-m8	17626149	17626169	147	-19.36
ADediting_1118017	chr4_17626182_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-549a-5p	chr4	17626177	17626183	7mer-m8	17626161	17626184	146	-18.76
ADediting_1118021	chr4_17626690_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-616-5p	chr4	17626684	17626691	8mer-1a	17626670	17626691	140	-6.24
ADediting_1118022	chr4_17626918_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-326	chr4	17626912	17626918	7mer-m8	17626900	17626919	140	-18.1
ADediting_1118022	chr4_17626918_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-330-5p	chr4	17626912	17626918	7mer-m8	17626898	17626919	140	-18.75
ADediting_1118022	chr4_17626918_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4314	chr4	17626911	17626917	7mer-m8	17626901	17626918	142	-19.99
ADediting_1118023	chr4_17626924_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-302a-5p	chr4	17626919	17626925	7mer-m8	17626901	17626926	148	-12.97
ADediting_1118024	chr4_17626925_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-302a-5p	chr4	17626919	17626925	7mer-m8	17626901	17626926	148	-12.97
ADediting_1118026	chr4_17626942_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4478	chr4	17626939	17626945	7mer-m8	17626931	17626946	149	-25.05
ADediting_1118026	chr4_17626942_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4649-3p	chr4	17626936	17626942	7mer-m8	17626923	17626943	140	-15.87
ADediting_1118026	chr4_17626942_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-485-5p	chr4	17626940	17626946	7mer-m8	17626926	17626947	153	-20.11
ADediting_1118026	chr4_17626942_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-7160-5p	chr4	17626937	17626943	7mer-m8	17626922	17626944	149	-20.61
ADediting_1118027	chr4_17626984_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-371b-5p	chr4	17626978	17626985	8mer-1a	17626964	17626985	146	-7.79
ADediting_1118027	chr4_17626984_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-373-5p	chr4	17626978	17626985	8mer-1a	17626964	17626985	142	-8.35
ADediting_1118027	chr4_17626984_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-616-5p	chr4	17626978	17626985	8mer-1a	17626964	17626985	140	-5.71
ADediting_1118029	chr4_17627019_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-324-3p	chr4	17627016	17627022	7mer-m8	17627001	17627023	142	-18.86
ADediting_1118030	chr4_17627027_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-25-3p	chr4	17627022	17627028	7mer-m8	17627009	17627029	146	-17
ADediting_1118030	chr4_17627027_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-32-5p	chr4	17627022	17627028	7mer-m8	17627004	17627029	145	-14.37
ADediting_1118030	chr4_17627027_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-363-3p	chr4	17627022	17627028	7mer-m8	17627008	17627029	149	-12.29
ADediting_1118030	chr4_17627027_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-367-3p	chr4	17627022	17627028	7mer-m8	17627008	17627029	153	-15.53
ADediting_1118030	chr4_17627027_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5186	chr4	17627025	17627031	7mer-m8	17627012	17627032	140	-9.9
ADediting_1118030	chr4_17627027_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-92a-3p	chr4	17627022	17627028	7mer-m8	17627008	17627029	142	-11.47
ADediting_1118030	chr4_17627027_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-92b-3p	chr4	17627022	17627028	7mer-m8	17627008	17627029	142	-14.93
ADediting_1118031	chr4_17627028_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-25-3p	chr4	17627022	17627028	7mer-m8	17627009	17627029	146	-17
ADediting_1118031	chr4_17627028_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-32-5p	chr4	17627022	17627028	7mer-m8	17627004	17627029	145	-14.37
ADediting_1118031	chr4_17627028_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-363-3p	chr4	17627022	17627028	7mer-m8	17627008	17627029	149	-12.29
ADediting_1118031	chr4_17627028_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-367-3p	chr4	17627022	17627028	7mer-m8	17627008	17627029	153	-15.53
ADediting_1118031	chr4_17627028_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5186	chr4	17627025	17627031	7mer-m8	17627012	17627032	140	-9.9
ADediting_1118031	chr4_17627028_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-92a-3p	chr4	17627022	17627028	7mer-m8	17627008	17627029	142	-11.47
ADediting_1118031	chr4_17627028_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-92b-3p	chr4	17627022	17627028	7mer-m8	17627008	17627029	142	-14.93
ADediting_1118033	chr4_17627043_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-377-5p	chr4	17627041	17627047	7mer-m8	17627025	17627048	150	-19.22
ADediting_1118033	chr4_17627043_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6086	chr4	17627041	17627047	7mer-m8	17627029	17627048	150	-21.06
ADediting_1118033	chr4_17627043_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6516-5p	chr4	17627037	17627043	7mer-m8	17627022	17627044	144	-14.25
ADediting_1118034	chr4_17627044_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-377-5p	chr4	17627041	17627047	7mer-m8	17627025	17627048	150	-19.22
ADediting_1118034	chr4_17627044_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6086	chr4	17627041	17627047	7mer-m8	17627029	17627048	150	-21.06
ADediting_1118034	chr4_17627044_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6516-5p	chr4	17627037	17627043	7mer-m8	17627022	17627044	144	-14.25
ADediting_1118040	chr4_17627141_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3675-3p	chr4	17627139	17627145	7mer-m8	17627125	17627146	145	-12.58
ADediting_1118042	chr4_17627214_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-887-5p	chr4	17627207	17627214	8mer-1a	17627194	17627214	142	-11.92
ADediting_1118043	chr4_17627215_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-129-1-3p	chr4	17627213	17627219	7mer-m8	17627199	17627220	140	-10.75
ADediting_1118043	chr4_17627215_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-129-2-3p	chr4	17627213	17627219	7mer-m8	17627199	17627220	140	-10.75
ADediting_1118046	chr4_17627271_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-136-5p	chr4	17627269	17627276	8mer-1a	17627254	17627276	140	-9.33
ADediting_1118048	chr4_17627351_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-887-5p	chr4	17627344	17627351	8mer-1a	17627332	17627351	143	-14.73
ADediting_1118050	chr4_17627355_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4797-3p	chr4	17627353	17627360	8mer-1a	17627339	17627360	146	-19.89
ADediting_1118051	chr4_17627359_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-216a-5p	chr4	17627356	17627363	8mer-1a	17627342	17627363	145	-13.89
ADediting_1118051	chr4_17627359_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4797-3p	chr4	17627353	17627360	8mer-1a	17627339	17627360	146	-19.89
ADediting_1118053	chr4_17627370_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6514-3p	chr4	17627363	17627369	7mer-m8	17627350	17627370	151	-13.6
ADediting_1118054	chr4_17627386_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1285-3p	chr4	17627380	17627386	7mer-m8	17627366	17627387	140	-15.96
ADediting_1118054	chr4_17627386_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4498	chr4	17627383	17627390	8mer-1a	17627365	17627390	149	-28.33
ADediting_1118054	chr4_17627386_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4505	chr4	17627382	17627388	7mer-m8	17627372	17627389	149	-27.51
ADediting_1118054	chr4_17627386_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5189-5p	chr4	17627380	17627386	7mer-m8	17627365	17627387	155	-24.42
ADediting_1118054	chr4_17627386_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5787	chr4	17627382	17627388	7mer-m8	17627371	17627389	154	-33.08
ADediting_1118054	chr4_17627386_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-612	chr4	17627380	17627386	7mer-m8	17627362	17627387	152	-26.56
ADediting_1118054	chr4_17627386_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6860	chr4	17627380	17627386	7mer-m8	17627365	17627387	150	-22.15
ADediting_1118055	chr4_17627722_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-550b-2-5p	chr4	17627715	17627721	7mer-m8	17627701	17627722	145	-18.83
ADediting_1118055	chr4_17627722_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6529-3p	chr4	17627716	17627722	7mer-m8	17627702	17627723	145	-20.88
ADediting_1118055	chr4_17627722_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-660-3p	chr4	17627720	17627726	7mer-m8	17627709	17627727	154	-24.08
ADediting_1118055	chr4_17627722_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6889-3p	chr4	17627716	17627722	7mer-m8	17627704	17627723	140	-18.54
ADediting_1118057	chr4_17627735_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1976	chr4	17627732	17627739	8mer-1a	17627719	17627739	153	-25.56
ADediting_1118057	chr4_17627735_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6747-3p	chr4	17627730	17627737	8mer-1a	17627714	17627737	153	-25.59
ADediting_1118058	chr4_17627749_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-498-5p	chr4	17627743	17627749	7mer-m8	17627728	17627750	142	-9.71
ADediting_1118059	chr4_17627750_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-498-5p	chr4	17627743	17627749	7mer-m8	17627728	17627750	142	-9.71
ADediting_1118060	chr4_17627754_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1343-3p	chr4	17627750	17627756	7mer-m8	17627734	17627757	150	-24.17
ADediting_1118060	chr4_17627754_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6742-3p	chr4	17627749	17627756	8mer-1a	17627737	17627756	145	-14.93
ADediting_1118060	chr4_17627754_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6783-3p	chr4	17627750	17627756	7mer-m8	17627737	17627757	146	-17.13
ADediting_1118061	chr4_17627770_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4772-3p	chr4	17627764	17627770	7mer-m8	17627749	17627771	154	-16.43
ADediting_1118062	chr4_17627774_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4284	chr4	17627770	17627776	7mer-m8	17627760	17627777	146	-12.71
ADediting_1118064	chr4_17627789_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5693	chr4	17627785	17627791	7mer-m8	17627772	17627792	151	-23.61
ADediting_1118066	chr4_17627799_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3652	chr4	17627795	17627801	7mer-m8	17627783	17627802	148	-20.61
ADediting_1118067	chr4_17627809_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6773-3p	chr4	17627805	17627812	8mer-1a	17627791	17627812	142	-15.63
ADediting_1118067	chr4_17627809_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6879-3p	chr4	17627803	17627810	8mer-1a	17627788	17627810	142	-19.91
ADediting_1118068	chr4_17627811_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3664-5p	chr4	17627808	17627815	8mer-1a	17627793	17627815	151	-18.79
ADediting_1118068	chr4_17627811_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6773-3p	chr4	17627805	17627812	8mer-1a	17627791	17627812	142	-15.63
ADediting_1118069	chr4_17627813_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-3664-5p	chr4	17627808	17627815	8mer-1a	17627793	17627815	151	-18.79
ADediting_1118069	chr4_17627813_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-550b-3p	chr4	17627811	17627818	8mer-1a	17627799	17627818	153	-21.83
ADediting_1118070	chr4_17627816_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-200c-5p	chr4	17627813	17627819	7mer-m8	17627798	17627820	145	-12.95
ADediting_1118070	chr4_17627816_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-550b-3p	chr4	17627811	17627818	8mer-1a	17627799	17627818	153	-21.83
ADediting_1118071	chr4_17627817_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-200c-5p	chr4	17627813	17627819	7mer-m8	17627798	17627820	145	-12.95
ADediting_1118071	chr4_17627817_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-550b-3p	chr4	17627811	17627818	8mer-1a	17627799	17627818	153	-21.83
ADediting_1118072	chr4_17627819_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-200c-5p	chr4	17627813	17627819	7mer-m8	17627798	17627820	145	-12.95
ADediting_1118078	chr4_17629028_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-378a-5p	chr4	17629024	17629030	7mer-m8	17629009	17629031	154	-26.62
ADediting_1118079	chr4_17629036_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-7154-5p	chr4	17629032	17629038	7mer-m8	17629020	17629039	153	-16.57
ADediting_1118080	chr4_17629042_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6131	chr4	17629037	17629043	7mer-m8	17629025	17629044	146	-20
ADediting_1118081	chr4_17629051_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4435	chr4	17629044	17629051	8mer-1a	17629031	17629051	146	-19.19
ADediting_1118081	chr4_17629051_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4781-3p	chr4	17629048	17629054	7mer-m8	17629037	17629055	144	-13.86
ADediting_1118082	chr4_17629052_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4716-5p	chr4	17629050	17629056	7mer-m8	17629036	17629057	140	-11.3
ADediting_1118082	chr4_17629052_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4781-3p	chr4	17629048	17629054	7mer-m8	17629037	17629055	144	-13.86
ADediting_1118083	chr4_17629054_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4716-5p	chr4	17629050	17629056	7mer-m8	17629036	17629057	140	-11.3
ADediting_1118083	chr4_17629054_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4781-3p	chr4	17629048	17629054	7mer-m8	17629037	17629055	144	-13.86
ADediting_1118086	chr4_17629062_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6823-5p	chr4	17629060	17629066	7mer-m8	17629047	17629067	143	-17.07
ADediting_1118087	chr4_17629073_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6832-5p	chr4	17629067	17629073	7mer-m8	17629052	17629074	140	-18.87
ADediting_1118092	chr4_17629112_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-7151-3p	chr4	17629105	17629111	7mer-m8	17629092	17629112	140	-16.96
ADediting_1118095	chr4_17629129_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6778-3p	chr4	17629125	17629131	7mer-m8	17629113	17629132	141	-15.45
ADediting_1118097	chr4_17629139_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1976	chr4	17629136	17629143	8mer-1a	17629123	17629143	149	-24.39
ADediting_1118097	chr4_17629139_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6747-3p	chr4	17629134	17629141	8mer-1a	17629119	17629141	149	-23.68
ADediting_1118098	chr4_17629153_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-498-5p	chr4	17629147	17629153	7mer-m8	17629132	17629154	142	-9.71
ADediting_1118099	chr4_17629154_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-498-5p	chr4	17629147	17629153	7mer-m8	17629132	17629154	142	-9.71
ADediting_1118100	chr4_17629161_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6778-3p	chr4	17629157	17629163	7mer-m8	17629146	17629164	143	-14.8
ADediting_1118102	chr4_17629198_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-342-5p	chr4	17629195	17629202	8mer-1a	17629181	17629202	142	-17.45
ADediting_1118102	chr4_17629198_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4664-5p	chr4	17629195	17629202	8mer-1a	17629181	17629202	140	-20.71
ADediting_1118102	chr4_17629198_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6737-5p	chr4	17629196	17629202	7mer-m8	17629180	17629203	147	-22.38
ADediting_1118102	chr4_17629198_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6812-5p	chr4	17629196	17629202	7mer-m8	17629179	17629203	152	-24.34
ADediting_1118102	chr4_17629198_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6819-5p	chr4	17629196	17629202	7mer-m8	17629181	17629203	153	-25.19
ADediting_1118103	chr4_17629203_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-320e	chr4	17629200	17629206	7mer-m8	17629189	17629207	153	-18.46
ADediting_1118103	chr4_17629203_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4731-5p	chr4	17629198	17629204	7mer-m8	17629184	17629205	144	-21.05
ADediting_1118103	chr4_17629203_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6737-5p	chr4	17629196	17629202	7mer-m8	17629180	17629203	147	-22.38
ADediting_1118103	chr4_17629203_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6812-5p	chr4	17629196	17629202	7mer-m8	17629179	17629203	152	-24.34
ADediting_1118103	chr4_17629203_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6819-5p	chr4	17629196	17629202	7mer-m8	17629181	17629203	153	-25.19
ADediting_1118103	chr4_17629203_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-7155-5p	chr4	17629197	17629203	7mer-m8	17629183	17629204	151	-27.38
ADediting_1118104	chr4_17629215_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5691	chr4	17629213	17629220	8mer-1a	17629199	17629220	153	-22.67
ADediting_1118104	chr4_17629215_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6773-3p	chr4	17629209	17629216	8mer-1a	17629195	17629216	142	-15.63
ADediting_1118104	chr4_17629215_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6805-3p	chr4	17629213	17629220	8mer-1a	17629199	17629220	154	-21.48
ADediting_1118105	chr4_17629217_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5691	chr4	17629213	17629220	8mer-1a	17629199	17629220	153	-22.67
ADediting_1118105	chr4_17629217_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6805-3p	chr4	17629213	17629220	8mer-1a	17629199	17629220	154	-21.48
ADediting_1118106	chr4_17629220_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-431-5p	chr4	17629217	17629223	7mer-m8	17629206	17629224	147	-17.87
ADediting_1118106	chr4_17629220_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5691	chr4	17629213	17629220	8mer-1a	17629199	17629220	153	-22.67
ADediting_1118106	chr4_17629220_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6805-3p	chr4	17629213	17629220	8mer-1a	17629199	17629220	154	-21.48
ADediting_1118107	chr4_17629221_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-431-5p	chr4	17629217	17629223	7mer-m8	17629206	17629224	147	-17.87
ADediting_1651259	chr4_17626179_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-549a-5p	chr4	17626177	17626183	7mer-m8	17626161	17626184	146	-18.76
ADediting_1651261	chr4_17627757_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1306-5p	chr4	17627754	17627760	7mer-m8	17627738	17627761	145	-21.57
ADediting_1651261	chr4_17627757_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-1343-3p	chr4	17627750	17627756	7mer-m8	17627734	17627757	150	-24.17
ADediting_1651261	chr4_17627757_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-6783-3p	chr4	17627750	17627756	7mer-m8	17627737	17627757	146	-17.13

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1337757	chr7_5495852_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-589-3p	chr4	17624249	17624255	7mer-m8	17624233	17624256	155	-16.17
ADediting_1337757	chr7_5495852_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-589-3p	chr4	17624608	17624615	8mer-1a	17624591	17624615	153	-22.42
ADediting_1337757	chr7_5495852_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-589-3p	chr4	17625781	17625787	7mer-m8	17625766	17625788	143	-18.58
ADediting_1337757	chr7_5495852_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-589-3p	chr4	17626701	17626707	7mer-m8	17626684	17626708	161	-18.46
ADediting_1337757	chr7_5495852_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-589-3p	chr4	17626994	17627000	7mer-m8	17626977	17627001	158	-19.59
ADediting_1337757	chr7_5495852_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-589-3p	chr4	17631048	17631054	7mer-m8	17631033	17631055	152	-16.38
ADediting_1391023	chr8_140732605_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-151a-3p	chr4	17631714	17631721	8mer-1a	17631703	17631721	154	-15.49
ADediting_1391023	chr8_140732605_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-151a-3p	chr4	17632311	17632317	7mer-m8	17632298	17632318	140	-17.9
ADediting_1535953	chr14_101045971_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-381-3p	chr4	17633824	17633830	7mer-1a	17633812	17633830	140	-18.74
ADediting_1535954	chr14_101045974_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-381-3p	chr4	17630197	17630203	7mer-m8	17630186	17630204	144	-15.66
ADediting_1631458	chr19_40282624_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-641	chr4	17630256	17630262	7mer-m8	17630240	17630263	163	-19.55
ADediting_496066	chr15_66496985_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4512	chr4	17625040	17625046	7mer-m8	17625025	17625047	141	-17.54
ADediting_843620	chr2_207754818_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4775	chr4	17625719	17625725	7mer-m8	17625705	17625726	150	-8.84
ADediting_843620	chr2_207754818_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4775	chr4	17630869	17630876	8mer-1a	17630855	17630876	144	-9.59
ADediting_98288	chr1_32086990_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5585-3p	chr4	17626655	17626661	7mer-m8	17626641	17626662	144	-13.62
ADediting_98289	chr1_32086992_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5585-3p	chr4	17625102	17625108	7mer-m8	17625083	17625109	162	-30.65
ADediting_98289	chr1_32086992_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5585-3p	chr4	17625949	17625955	7mer-m8	17625935	17625956	144	-16.55

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1097295	chr3_85385762_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5688	chr4	17631752	17631758	7mer-m8	17631735	17631759	151	-14.86
ADediting_1337758	chr7_5495892_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-589-5p	chr4	17625158	17625164	7mer-m8	17625144	17625165	140	-12.9
ADediting_1337758	chr7_5495892_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-589-5p	chr4	17628540	17628546	7mer-m8	17628524	17628547	155	-18.97
ADediting_1337758	chr7_5495892_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-589-5p	chr4	17632844	17632850	7mer-m8	17632830	17632851	145	-14.02
ADediting_1391023	chr8_140732605_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-151a-3p	chr4	17631458	17631464	7mer-m8	17631446	17631465	144	-15.34
ADediting_1471003	chr9_63819626_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4477b	chr4	17629916	17629923	8mer-1a	17629902	17629923	151	-12.76
ADediting_1471004	chr9_63819627_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4477b	chr4	17629916	17629923	8mer-1a	17629902	17629923	151	-12.76
ADediting_1556067	chr19_40282625_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-641	chr4	17627465	17627472	8mer-1a	17627448	17627472	152	-10.92
ADediting_1556067	chr19_40282625_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-641	chr4	17628626	17628632	7mer-m8	17628610	17628633	141	-11.44
ADediting_1596844	chr1_162342605_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-556-3p	chr4	17629885	17629892	8mer-1a	17629871	17629892	150	-11.68
ADediting_1631458	chr19_40282624_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-641	chr4	17627465	17627472	8mer-1a	17627448	17627472	152	-10.92
ADediting_1631458	chr19_40282624_-	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-641	chr4	17628626	17628632	7mer-m8	17628610	17628633	141	-11.44
ADediting_1643790	chr3_121049689_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5682	chr4	17627660	17627666	7mer-m8	17627646	17627667	148	-15.92
ADediting_1643790	chr3_121049689_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5682	chr4	17633609	17633615	7mer-m8	17633593	17633616	152	-14.51
ADediting_843620	chr2_207754818_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-4775	chr4	17629391	17629398	8mer-1a	17629377	17629398	155	-11.5
ADediting_98288	chr1_32086990_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5585-3p	chr4	17630905	17630911	7mer-1a	17630889	17630911	155	-19.65
ADediting_98289	chr1_32086992_+	ENSG00000118579.13	ENST00000237380.12	MED28-201	hsa-miR-5585-3p	chr4	17630905	17630911	7mer-1a	17630889	17630911	155	-19.65

Differentially expressed gene-miRNA network

Differentially expressed mRNA-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for MED28

- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000237380.12	protein_coding

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_1117998	ENST00000237380.12	chr4_17625755_+	2508	-3702.00	-3701.20	-3778.80
ADediting_1117999	ENST00000237380.12	chr4_17626078_+	2831	-3704.10	-3701.20	-3778.80
ADediting_1118000	ENST00000237380.12	chr4_17626083_+	2836	-3701.70	-3701.20	-3778.80
ADediting_1118001	ENST00000237380.12	chr4_17626089_+	2842	-3707.20	-3701.20	-3778.80
ADediting_1118002	ENST00000237380.12	chr4_17626094_+	2847	-3707.40	-3701.20	-3778.80
ADediting_1118003	ENST00000237380.12	chr4_17626100_+	2853	-3705.20	-3701.20	-3778.80
ADediting_1118004	ENST00000237380.12	chr4_17626108_+	2861	-3700.80	-3701.20	-3778.80
ADediting_1118005	ENST00000237380.12	chr4_17626116_+	2869	-3701.30	-3701.20	-3778.80
ADediting_1118006	ENST00000237380.12	chr4_17626117_+	2870	-3701.20	-3701.20	-3778.80
ADediting_1118007	ENST00000237380.12	chr4_17626122_+	2875	-3700.50	-3701.20	-3778.80
ADediting_1118008	ENST00000237380.12	chr4_17626125_+	2878	-3700.80	-3701.20	-3778.80
ADediting_1118009	ENST00000237380.12	chr4_17626139_+	2892	-3700.30	-3701.20	-3778.80
ADediting_1118010	ENST00000237380.12	chr4_17626143_+	2896	-3700.50	-3701.20	-3778.80
ADediting_1118011	ENST00000237380.12	chr4_17626146_+	2899	-3700.30	-3701.20	-3778.80
ADediting_1118012	ENST00000237380.12	chr4_17626148_+	2901	-3700.70	-3701.20	-3778.80
ADediting_1118013	ENST00000237380.12	chr4_17626149_+	2902	-3698.20	-3701.20	-3778.80
ADediting_1118014	ENST00000237380.12	chr4_17626157_+	2910	-3700.80	-3701.20	-3778.80
ADediting_1118015	ENST00000237380.12	chr4_17626158_+	2911	-3701.20	-3701.20	-3778.80
ADediting_1118016	ENST00000237380.12	chr4_17626169_+	2922	-3700.50	-3701.20	-3778.80
ADediting_1651259	ENST00000237380.12	chr4_17626179_+	2932	-3705.30	-3701.20	-3778.80
ADediting_1118017	ENST00000237380.12	chr4_17626182_+	2935	-3706.80	-3701.20	-3778.80
ADediting_1118018	ENST00000237380.12	chr4_17626186_+	2939	-3702.40	-3701.20	-3778.80
ADediting_1118019	ENST00000237380.12	chr4_17626187_+	2940	-3704.30	-3701.20	-3778.80
ADediting_1118020	ENST00000237380.12	chr4_17626228_+	2981	-3701.50	-3701.20	-3778.80
ADediting_1118021	ENST00000237380.12	chr4_17626690_+	3443	-3700.30	-3701.20	-3778.80
ADediting_1118022	ENST00000237380.12	chr4_17626918_+	3671	-3701.20	-3701.20	-3778.80
ADediting_1118023	ENST00000237380.12	chr4_17626924_+	3677	-3700.30	-3701.20	-3778.80
ADediting_1118024	ENST00000237380.12	chr4_17626925_+	3678	-3700.90	-3701.20	-3778.80
ADediting_1118025	ENST00000237380.12	chr4_17626928_+	3681	-3706.40	-3701.20	-3778.80
ADediting_1118026	ENST00000237380.12	chr4_17626942_+	3695	-3700.50	-3701.20	-3778.80
ADediting_1118027	ENST00000237380.12	chr4_17626984_+	3737	-3700.30	-3701.20	-3778.80
ADediting_1118028	ENST00000237380.12	chr4_17627012_+	3765	-3707.80	-3701.20	-3778.80
ADediting_1118029	ENST00000237380.12	chr4_17627019_+	3772	-3700.50	-3701.20	-3778.80
ADediting_1118030	ENST00000237380.12	chr4_17627027_+	3780	-3707.20	-3701.20	-3778.80
ADediting_1118031	ENST00000237380.12	chr4_17627028_+	3781	-3701.40	-3701.20	-3778.80
ADediting_1118032	ENST00000237380.12	chr4_17627038_+	3791	-3700.80	-3701.20	-3778.80
ADediting_1118033	ENST00000237380.12	chr4_17627043_+	3796	-3700.90	-3701.20	-3778.80
ADediting_1118034	ENST00000237380.12	chr4_17627044_+	3797	-3701.20	-3701.20	-3778.80
ADediting_1651260	ENST00000237380.12	chr4_17627063_+	3816	-3700.90	-3701.20	-3778.80
ADediting_1118035	ENST00000237380.12	chr4_17627064_+	3817	-3700.90	-3701.20	-3778.80
ADediting_1118036	ENST00000237380.12	chr4_17627068_+	3821	-3701.50	-3701.20	-3778.80
ADediting_1118037	ENST00000237380.12	chr4_17627076_+	3829	-3707.90	-3701.20	-3778.80
ADediting_1118038	ENST00000237380.12	chr4_17627114_+	3867	-3706.20	-3701.20	-3778.80
ADediting_1118039	ENST00000237380.12	chr4_17627138_+	3891	-3703.90	-3701.20	-3778.80
ADediting_1118040	ENST00000237380.12	chr4_17627141_+	3894	-3703.00	-3701.20	-3778.80
ADediting_1118041	ENST00000237380.12	chr4_17627155_+	3908	-3700.80	-3701.20	-3778.80
ADediting_1118042	ENST00000237380.12	chr4_17627214_+	3967	-3703.20	-3701.20	-3778.80
ADediting_1118043	ENST00000237380.12	chr4_17627215_+	3968	-3703.90	-3701.20	-3778.80
ADediting_1118044	ENST00000237380.12	chr4_17627227_+	3980	-3702.30	-3701.20	-3778.80
ADediting_1118045	ENST00000237380.12	chr4_17627270_+	4023	-3705.10	-3701.20	-3778.80
ADediting_1118046	ENST00000237380.12	chr4_17627271_+	4024	-3701.50	-3701.20	-3778.80
ADediting_1118047	ENST00000237380.12	chr4_17627325_+	4078	-3703.90	-3701.20	-3778.80
ADediting_1118048	ENST00000237380.12	chr4_17627351_+	4104	-3703.60	-3701.20	-3778.80
ADediting_1118049	ENST00000237380.12	chr4_17627352_+	4105	-3705.80	-3701.20	-3778.80
ADediting_1118050	ENST00000237380.12	chr4_17627355_+	4108	-3706.30	-3701.20	-3778.80
ADediting_1118051	ENST00000237380.12	chr4_17627359_+	4112	-3703.20	-3701.20	-3778.80
ADediting_1118052	ENST00000237380.12	chr4_17627364_+	4117	-3701.20	-3701.20	-3778.80
ADediting_1118053	ENST00000237380.12	chr4_17627370_+	4123	-3702.50	-3701.20	-3778.80
ADediting_1118054	ENST00000237380.12	chr4_17627386_+	4139	-3701.30	-3701.20	-3778.80
ADediting_1118055	ENST00000237380.12	chr4_17627722_+	4475	-3705.90	-3701.20	-3778.80
ADediting_1118056	ENST00000237380.12	chr4_17627731_+	4484	-3700.30	-3701.20	-3778.80
ADediting_1118057	ENST00000237380.12	chr4_17627735_+	4488	-3701.20	-3701.20	-3778.80
ADediting_1118058	ENST00000237380.12	chr4_17627749_+	4502	-3700.70	-3701.20	-3778.80
ADediting_1118059	ENST00000237380.12	chr4_17627750_+	4503	-3701.20	-3701.20	-3778.80
ADediting_1118060	ENST00000237380.12	chr4_17627754_+	4507	-3707.40	-3701.20	-3778.80
ADediting_1651261	ENST00000237380.12	chr4_17627757_+	4510	-3700.30	-3701.20	-3778.80
ADediting_1118061	ENST00000237380.12	chr4_17627770_+	4523	-3700.50	-3701.20	-3778.80
ADediting_1118062	ENST00000237380.12	chr4_17627774_+	4527	-3700.30	-3701.20	-3778.80
ADediting_1118063	ENST00000237380.12	chr4_17627785_+	4538	-3703.60	-3701.20	-3778.80
ADediting_1118064	ENST00000237380.12	chr4_17627789_+	4542	-3700.80	-3701.20	-3778.80
ADediting_1118065	ENST00000237380.12	chr4_17627794_+	4547	-3700.80	-3701.20	-3778.80
ADediting_1118066	ENST00000237380.12	chr4_17627799_+	4552	-3701.10	-3701.20	-3778.80
ADediting_1118067	ENST00000237380.12	chr4_17627809_+	4562	-3700.60	-3701.20	-3778.80
ADediting_1118068	ENST00000237380.12	chr4_17627811_+	4564	-3700.50	-3701.20	-3778.80
ADediting_1118069	ENST00000237380.12	chr4_17627813_+	4566	-3700.30	-3701.20	-3778.80
ADediting_1118070	ENST00000237380.12	chr4_17627816_+	4569	-3700.30	-3701.20	-3778.80
ADediting_1118071	ENST00000237380.12	chr4_17627817_+	4570	-3700.90	-3701.20	-3778.80
ADediting_1118072	ENST00000237380.12	chr4_17627819_+	4572	-3700.60	-3701.20	-3778.80
ADediting_1118073	ENST00000237380.12	chr4_17627831_+	4584	-3701.30	-3701.20	-3778.80
ADediting_1118074	ENST00000237380.12	chr4_17627832_+	4585	-3701.30	-3701.20	-3778.80
ADediting_1118075	ENST00000237380.12	chr4_17627833_+	4586	-3701.30	-3701.20	-3778.80
ADediting_1118076	ENST00000237380.12	chr4_17628930_+	5683	-3701.40	-3701.20	-3778.80
ADediting_1118077	ENST00000237380.12	chr4_17629023_+	5776	-3700.40	-3701.20	-3778.80
ADediting_1118078	ENST00000237380.12	chr4_17629028_+	5781	-3700.50	-3701.20	-3778.80
ADediting_1118079	ENST00000237380.12	chr4_17629036_+	5789	-3704.50	-3701.20	-3778.80
ADediting_1118080	ENST00000237380.12	chr4_17629042_+	5795	-3700.50	-3701.20	-3778.80
ADediting_1118081	ENST00000237380.12	chr4_17629051_+	5804	-3700.90	-3701.20	-3778.80
ADediting_1118082	ENST00000237380.12	chr4_17629052_+	5805	-3701.20	-3701.20	-3778.80
ADediting_1118083	ENST00000237380.12	chr4_17629054_+	5807	-3700.80	-3701.20	-3778.80
ADediting_1118084	ENST00000237380.12	chr4_17629060_+	5813	-3700.70	-3701.20	-3778.80
ADediting_1118085	ENST00000237380.12	chr4_17629061_+	5814	-3701.30	-3701.20	-3778.80
ADediting_1118086	ENST00000237380.12	chr4_17629062_+	5815	-3701.20	-3701.20	-3778.80
ADediting_1118087	ENST00000237380.12	chr4_17629073_+	5826	-3701.20	-3701.20	-3778.80
ADediting_1118088	ENST00000237380.12	chr4_17629076_+	5829	-3701.70	-3701.20	-3778.80
ADediting_1118089	ENST00000237380.12	chr4_17629077_+	5830	-3701.30	-3701.20	-3778.80
ADediting_1118090	ENST00000237380.12	chr4_17629082_+	5835	-3701.20	-3701.20	-3778.80
ADediting_1118091	ENST00000237380.12	chr4_17629091_+	5844	-3700.90	-3701.20	-3778.80
ADediting_1118092	ENST00000237380.12	chr4_17629112_+	5865	-3700.80	-3701.20	-3778.80
ADediting_1118093	ENST00000237380.12	chr4_17629118_+	5871	-3700.50	-3701.20	-3778.80
ADediting_1118094	ENST00000237380.12	chr4_17629122_+	5875	-3703.80	-3701.20	-3778.80
ADediting_1118095	ENST00000237380.12	chr4_17629129_+	5882	-3700.30	-3701.20	-3778.80
ADediting_1118096	ENST00000237380.12	chr4_17629135_+	5888	-3700.30	-3701.20	-3778.80
ADediting_1118097	ENST00000237380.12	chr4_17629139_+	5892	-3700.50	-3701.20	-3778.80
ADediting_1118098	ENST00000237380.12	chr4_17629153_+	5906	-3700.70	-3701.20	-3778.80
ADediting_1118099	ENST00000237380.12	chr4_17629154_+	5907	-3701.20	-3701.20	-3778.80
ADediting_1118100	ENST00000237380.12	chr4_17629161_+	5914	-3700.30	-3701.20	-3778.80
ADediting_1118101	ENST00000237380.12	chr4_17629178_+	5931	-3700.30	-3701.20	-3778.80
ADediting_1118102	ENST00000237380.12	chr4_17629198_+	5951	-3700.80	-3701.20	-3778.80
ADediting_1118103	ENST00000237380.12	chr4_17629203_+	5956	-3700.50	-3701.20	-3778.80
ADediting_1118104	ENST00000237380.12	chr4_17629215_+	5968	-3700.50	-3701.20	-3778.80
ADediting_1118105	ENST00000237380.12	chr4_17629217_+	5970	-3700.30	-3701.20	-3778.80
ADediting_1118106	ENST00000237380.12	chr4_17629220_+	5973	-3704.50	-3701.20	-3778.80
ADediting_1118107	ENST00000237380.12	chr4_17629221_+	5974	-3700.70	-3701.20	-3778.80

RNA A-to-I editing in lncRNA.

ADeditom_ID

ENST

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for MED28

Correlation between ADAR gene expression and RNA editing frequency

Tissue	ADeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	ADediting_1117998	chr4_17625755_+	2.00904063506937e-08	0.311967509018586	8.13761498675827e-08	0.298873411893699	0.708685565747615	0.0213039576937049
TCX	ADediting_1118010	chr4_17626143_+	0.0125926737177254	0.203291536576226	0.000185840278265772	0.300593802720427	0.0581156594380473	-0.155071787464396
CER	ADediting_1118018	chr4_17626186_+	0.0255862083901902	0.182272612680402	5.03192375745318e-07	0.396656745986198	0.0203416048420244	0.189293710690877
STG	ADediting_1118021	chr4_17626690_+	0.00211241570324974	0.330853798964313	0.000614614417131855	0.366127822104385	0.22237442057363	-0.134548643236686
TCX	ADediting_1118023	chr4_17626924_+	0.00751433166794805	0.217462332023385	0.000178294690450255	0.301391991303347	0.00172790242207412	-0.253763099220179
CER	ADediting_1118024	chr4_17626925_+	5.4357917200561e-05	0.323350008591652	0.000448749409203217	0.283044141526821	0.0294456279940134	0.177857412922465
CER	ADediting_1118025	chr4_17626928_+	0.000171290409518536	0.302161571980625	4.97521985990636e-06	0.363036274937559	0.0171008119667956	0.194460688251637
TCX	ADediting_1118025	chr4_17626928_+	0.000142886613284797	0.305616769293342	0.000754003291941735	0.272155234582146	0.867914065770955	-0.0136929552270599
CER	ADediting_1118028	chr4_17627012_+	0.00612482539751273	0.222846306546215	0.000148204050821143	0.304923894174859	0.0584573781947706	0.154863826200482
TCX	ADediting_1118029	chr4_17627019_+	0.212274944694653	0.10243319849527	4.76388601759227e-06	0.363709434196513	0.344059327877731	-0.0777884645252808
CER	ADediting_1118030	chr4_17627027_+	0.0336634250139676	0.173563852080318	0.000150153308702825	0.304675692804159	0.27533313432989	0.089639030420503
TCX	ADediting_1118030	chr4_17627027_+	3.32656450701969e-05	0.331953954153603	2.94422991994102e-16	0.603607087776109	0.00581339098306139	-0.224201290248282
CER	ADediting_1118031	chr4_17627028_+	0.00527910607119336	0.226684565958378	1.91864746583877e-05	0.341300841644769	0.0547866953042918	0.157152235592064
TCX	ADediting_1118031	chr4_17627028_+	0.000814624513828686	0.270493764565729	4.44389588628603e-11	0.504896809137946	8.41584356316675e-05	-0.315467173309196
CER	ADediting_1118034	chr4_17627044_+	0.0077540203177778	0.216624600054619	0.000118204083664057	0.3091855115939	0.29320429674741	0.0863855474683115
TCX	ADediting_1118034	chr4_17627044_+	0.000522356176915218	0.279902694452479	5.53466358474688e-08	0.425874726771779	0.0285971802370008	-0.178783752861931
TCX	ADediting_1118036	chr4_17627068_+	0.0130213461956348	0.202342093050664	8.51459404879964e-05	0.315253767286264	0.0633031723238583	-0.152017217811805
CER	ADediting_1118050	chr4_17627355_+	0.015625690993264	0.197100025848834	0.0090109351664551	0.212574837342728	5.33485029533898e-05	0.323683212416575
TCX	ADediting_1118059	chr4_17627750_+	0.000895661980794792	0.268441807852123	3.65444489076196e-05	0.330326717956557	0.337720560701336	-0.07881326910138
CER	ADediting_1118060	chr4_17627754_+	0.000403056813438393	0.285243346368609	5.2114113883138e-05	0.324098810752628	0.24324463702272	0.0958605471539721
TCX	ADediting_1118060	chr4_17627754_+	9.56355789050212e-07	0.387605128920741	2.80683108981177e-07	0.404658162647636	0.550768420836077	-0.0490942337959193
CER	ADediting_1118062	chr4_17627774_+	1.1730036956158e-06	0.384669431796433	1.88063894719677e-09	0.465884230980047	0.00216646329863439	0.248510386827562
CER	ADediting_1118065	chr4_17627794_+	2.22642360881253e-08	0.437165384989294	5.00204406775514e-10	0.480246830088681	0.073173639307289	0.146730055783312
CER	ADediting_1118066	chr4_17627799_+	6.41702666361734e-05	0.32038295463564	1.101643367378e-06	0.385574835912114	0.311954251065168	0.0831107403551329
TCX	ADediting_1118066	chr4_17627799_+	0.00507067885703453	0.227714646856267	4.20761630354453e-08	0.429317193263856	0.00509808396334888	-0.22757706719077
CER	ADediting_1118068	chr4_17627811_+	0.000148095649342386	0.304937786192355	0.00280919738946098	0.242339426986028	0.240879157624913	0.0963410937480159
TCX	ADediting_1118068	chr4_17627811_+	1.30686268896615e-06	0.383104227987859	7.40759931348619e-09	0.450282626320313	0.099612707315858	-0.1349683979975
TCX	ADediting_1118071	chr4_17627817_+	0.00066896810660378	0.274705810496696	1.3147735519303e-05	0.347550774184352	0.137907247966825	-0.121705177348878
TCX	ADediting_1118076	chr4_17628930_+	0.713652130857617	0.0302076613971646	0.0592216137186378	-0.154402324301062	7.36721393645282e-05	0.317890311605013
CER	ADediting_1118086	chr4_17629062_+	0.00094131702982958	0.267359660701362	2.09909636319788e-09	0.464662034816502	0.288679239306878	0.0871965141303247
TCX	ADediting_1118086	chr4_17629062_+	0.160405389189355	0.115194137246632	0.000154324262509181	0.304154531496636	0.170779952028706	-0.112421286247214
STG	ADediting_1118086	chr4_17629062_+	0.0485502782209298	0.215908989921339	0.00336023646724475	0.316458968362292	0.867626150051257	0.0184607480283866
CER	ADediting_1118092	chr4_17629112_+	0.0237380542157916	0.184592379057377	1.01052726639822e-07	0.418177273740638	0.0016073216424835	0.255420464324488
CER	ADediting_1118095	chr4_17629129_+	0.000359170190650721	0.287584496957637	1.91333426373825e-08	0.439005068899719	0.556848260855858	0.0483479546915705
CER	ADediting_1118097	chr4_17629139_+	0.00730434385115175	0.218215980368011	8.33424643774408e-08	0.420661878256842	0.0262017933251567	0.181531795715996
TCX	ADediting_1118097	chr4_17629139_+	0.0171159687376006	0.194434613243762	2.91201657496951e-05	0.334242275750485	0.214311393603854	-0.101980862248599
CER	ADediting_1118098	chr4_17629153_+	0.00177973639235175	0.253082816548103	5.92652883901854e-08	0.425009676193615	0.0974183309823884	0.135842652341723
CER	ADediting_1118099	chr4_17629154_+	0.00599791862269996	0.223390861066658	3.23020286277437e-06	0.369668084224746	0.275425235887883	0.0896219045719877

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	1.11567985071714e-39	0.657008645238695	7.20038829302771e-21	0.498399692053499	2.93336134962843e-21	0.502723820043634
AC	8.00807398241155e-38	0.697919949274288	7.27988358339115e-21	0.54644743444383	3.05624253942719e-24	0.583860609511913
PCC	3.42709362119152e-27	0.679247259792775	1.63016947882107e-25	0.662609698376329	0.000973541800611132	0.236790820670577
CER	7.95016033650184e-47	0.867914401626171	1.03096899655213e-32	0.785965948192464	0.00112498714214118	0.263442764793396
TCX	1.39910527429655e-33	0.792389741309197	4.62801408353192e-06	0.364157342522701	1.37666170424233e-11	0.51615755177421
FP	7.28613965219673e-33	0.745741743752246	9.55146428647814e-31	0.728672585423253	0.000400456073050778	0.262499234142546
IFG	8.12570572353136e-07	0.812410823115377	8.32366976368981e-05	0.704962364206542	0.0376787758995703	0.417825638771676
PG	2.02409307627409e-55	0.859113353457178	8.72316561632403e-31	0.718126192328377	0.148948457834521	0.1062411065112
STG	1.85961689585991e-17	0.766764151141578	1.59909397466056e-11	0.653507497015913	0.22900204097412	0.132657537361251

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Relation with AD stages for MED28

Correlation between AD stages and RNA editing frequency

Tissue	ADeditomID	position	P-val	Coeff.
CER	ADediting_1118025	chr4_17626928_+	0.000594891960748046	0.325185945532573
CER	ADediting_1118030	chr4_17627027_+	0.000235366971829064	0.346867966359422
CER	ADediting_1118034	chr4_17627044_+	0.000621102806815025	0.324138042828774
CER	ADediting_1118062	chr4_17627774_+	0.000327774227359446	0.339303866552598
CER	ADediting_1118092	chr4_17629112_+	9.59846715352028e-05	0.366449194357391
CER	ADediting_1118098	chr4_17629153_+	0.00128265437709004	0.305924837006519
IFG	ADediting_1118087	chr4_17629073_+	0.0138806839050487	-0.48551999521549

Correlation between AD stages and this gene's expression

Tissue	P-val	Coeff.
CER	9.07342551747071e-07	0.452017808596794
TCX	1.03658373037519e-08	0.520930976252431
STG	0.00273899823475437	-0.322883277819241

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RelatedDrugs for MED28

Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for MED28

Diseases associated with this gene. (DisGeNet 4.0)

Gene	Disease ID	Disease name	# pubmeds	Source
MED28	C0006142	Malignant neoplasm of breast	1	CTD_human
MED28	C0027627	Neoplasm Metastasis	1	CTD_human
MED28	C0678222	Breast Carcinoma	1	CTD_human
MED28	C1257931	Mammary Neoplasms, Human	1	CTD_human
MED28	C1458155	Mammary Neoplasms	1	CTD_human

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