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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for NAA40 |
 Gene summary |
| Gene information | Gene symbol | NAA40 | Gene ID | 79829 |
| Gene name | N-alpha-acetyltransferase 40, NatD catalytic subunit | |
| Synonyms | NAT11|NatD|PATT1|hNatD | |
| Cytomap | 11q13.1 | |
| Type of gene | protein-coding | |
| Description | N-alpha-acetyltransferase 40N(alpha)-acetyltransferase 40, NatD catalytic subunit, homologN-acetyltransferase 11 (GCN5-related, putative)N-alpha acetyl transferase 40N-alpha-acetyltransferase DnatD catalytic subunitprotein acetyltransferase 1 | |
| Modification date | 20200313 | |
| UniProtAcc | Q86UY6, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| NAA40 | GO:0006474 | N-terminal protein amino acid acetylation | 25619998 |
| NAA40 | GO:0043967 | histone H4 acetylation | 25619998 |
| NAA40 | GO:0043968 | histone H2A acetylation | 25619998 |
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RNA A-to-I events for NAA40 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_265558(63940107, +), ADediting_265559(63940150, +), ADediting_265560(63940151, +), ADediting_265561(63940168, +), ADediting_265562(63940190, +), ADediting_265563(63944631, +), ADediting_265564(63944674, +), ADediting_265565(63944782, +), ADediting_265566(63944783, +), ADediting_265567(63944792, +), ADediting_265568(63944809, +), ADediting_265569(63944824, +), ADediting_265570(63944849, +), ADediting_265571(63946257, +), ADediting_265572(63946467, +), ADediting_265573(63947151, +), ADediting_265574(63947152, +), ADediting_265575(63947157, +), ADediting_265576(63947197, +), ADediting_265577(63947225, +), ADediting_265578(63947287, +), ADediting_265579(63947327, +), ADediting_265580(63947339, +), ADediting_265581(63947361, +), ADediting_265582(63947386, +), ADediting_265583(63947615, +), ADediting_265584(63947631, +), ADediting_265585(63947650, +), ADediting_265586(63947791, +), ADediting_265587(63947826, +), ADediting_265588(63947855, +), ADediting_265589(63947887, +), ADediting_265590(63947919, +), ADediting_265591(63947972, +), ADediting_265592(63947981, +), ADediting_265593(63947982, +), ADediting_265594(63947994, +), ADediting_265595(63948020, +), ADediting_265596(63948052, +), ADediting_265597(63948055, +), ADediting_265598(63948107, +), ADediting_265599(63948117, +), ADediting_265600(63948129, +), ADediting_265601(63948463, +), ADediting_265602(63948780, +), ADediting_265603(63948781, +), ADediting_265604(63948979, +), ADediting_265605(63948999, +), ADediting_265606(63949079, +), ADediting_265607(63949098, +), ADediting_265608(63949106, +), ADediting_265609(63949143, +), ADediting_265610(63949171, +), ADediting_265611(63951424, +), ADediting_265612(63951560, +), ADediting_265613(63956711, +), ADediting_265614(63956713, +), ADediting_265615(63956719, +), ADediting_265616(63956720, +), ADediting_265617(63956746, +), ADediting_265618(63956755, +), ADediting_265619(63956760, +), ADediting_265620(63956765, +), ADediting_265621(63956773, +), ADediting_265622(63956774, +), ADediting_265623(63956789, +), ADediting_265624(63956796, +), ADediting_265625(63956799, +), ADediting_265626(63956810, +), ADediting_265627(63956813, +), ADediting_265628(63956816, +), ADediting_265629(63956817, +), ADediting_265630(63956826, +), ADediting_265631(63956829, +), ADediting_265632(63956833, +), ADediting_265633(63956852, +), ADediting_265634(63956853, +), ADediting_265635(63956858, +), ADediting_265636(63956862, +), ADediting_265637(63956879, +), ADediting_265638(63956882, +), ADediting_265639(63956894, +), ADediting_265640(63956898, +), ADediting_265641(63956923, +), ADediting_265642(63956928, +), ADediting_265643(63956948, +), ADediting_1610350(63950005, +), ADediting_1610351(63950006, +), ADediting_1610352(63950018, +), |
Top |
RNA editing positional annotations for NAA40 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_265558 | chr11_63940107_+ | intronic |
| ADediting_265559 | chr11_63940150_+ | intronic |
| ADediting_265560 | chr11_63940151_+ | intronic |
| ADediting_265561 | chr11_63940168_+ | intronic |
| ADediting_265562 | chr11_63940190_+ | intronic |
| ADediting_265563 | chr11_63944631_+ | intronic |
| ADediting_265564 | chr11_63944674_+ | intronic |
| ADediting_265565 | chr11_63944782_+ | intronic |
| ADediting_265566 | chr11_63944783_+ | intronic |
| ADediting_265567 | chr11_63944792_+ | intronic |
| ADediting_265568 | chr11_63944809_+ | intronic |
| ADediting_265569 | chr11_63944824_+ | intronic |
| ADediting_265570 | chr11_63944849_+ | intronic |
| ADediting_265571 | chr11_63946257_+ | intronic |
| ADediting_265572 | chr11_63946467_+ | intronic |
| ADediting_265573 | chr11_63947151_+ | intronic |
| ADediting_265574 | chr11_63947152_+ | intronic |
| ADediting_265575 | chr11_63947157_+ | intronic |
| ADediting_265576 | chr11_63947197_+ | intronic |
| ADediting_265577 | chr11_63947225_+ | intronic |
| ADediting_265578 | chr11_63947287_+ | intronic |
| ADediting_265579 | chr11_63947327_+ | intronic |
| ADediting_265580 | chr11_63947339_+ | intronic |
| ADediting_265581 | chr11_63947361_+ | intronic |
| ADediting_265582 | chr11_63947386_+ | intronic |
| ADediting_265583 | chr11_63947615_+ | intronic |
| ADediting_265584 | chr11_63947631_+ | intronic |
| ADediting_265585 | chr11_63947650_+ | intronic |
| ADediting_265586 | chr11_63947791_+ | intronic |
| ADediting_265587 | chr11_63947826_+ | intronic |
| ADediting_265588 | chr11_63947855_+ | intronic |
| ADediting_265589 | chr11_63947887_+ | intronic |
| ADediting_265590 | chr11_63947919_+ | intronic |
| ADediting_265591 | chr11_63947972_+ | intronic |
| ADediting_265592 | chr11_63947981_+ | intronic |
| ADediting_265593 | chr11_63947982_+ | intronic |
| ADediting_265594 | chr11_63947994_+ | intronic |
| ADediting_265595 | chr11_63948020_+ | intronic |
| ADediting_265596 | chr11_63948052_+ | intronic |
| ADediting_265597 | chr11_63948055_+ | intronic |
| ADediting_265598 | chr11_63948107_+ | intronic |
| ADediting_265599 | chr11_63948117_+ | intronic |
| ADediting_265600 | chr11_63948129_+ | intronic |
| ADediting_265601 | chr11_63948463_+ | intronic |
| ADediting_265602 | chr11_63948780_+ | intronic |
| ADediting_265603 | chr11_63948781_+ | intronic |
| ADediting_265604 | chr11_63948979_+ | intronic |
| ADediting_265605 | chr11_63948999_+ | intronic |
| ADediting_265606 | chr11_63949079_+ | intronic |
| ADediting_265607 | chr11_63949098_+ | intronic |
| ADediting_265608 | chr11_63949106_+ | intronic |
| ADediting_265609 | chr11_63949143_+ | intronic |
| ADediting_265610 | chr11_63949171_+ | intronic |
| ADediting_265611 | chr11_63951424_+ | intronic |
| ADediting_265612 | chr11_63951560_+ | intronic |
| ADediting_265613 | chr11_63956711_+ | UTR3 |
| ADediting_265614 | chr11_63956713_+ | UTR3 |
| ADediting_265615 | chr11_63956719_+ | UTR3 |
| ADediting_265616 | chr11_63956720_+ | UTR3 |
| ADediting_265617 | chr11_63956746_+ | UTR3 |
| ADediting_265618 | chr11_63956755_+ | UTR3 |
| ADediting_265619 | chr11_63956760_+ | UTR3 |
| ADediting_265620 | chr11_63956765_+ | UTR3 |
| ADediting_265621 | chr11_63956773_+ | UTR3 |
| ADediting_265622 | chr11_63956774_+ | UTR3 |
| ADediting_265623 | chr11_63956789_+ | UTR3 |
| ADediting_265624 | chr11_63956796_+ | UTR3 |
| ADediting_265625 | chr11_63956799_+ | UTR3 |
| ADediting_265626 | chr11_63956810_+ | UTR3 |
| ADediting_265627 | chr11_63956813_+ | UTR3 |
| ADediting_265628 | chr11_63956816_+ | UTR3 |
| ADediting_265629 | chr11_63956817_+ | UTR3 |
| ADediting_265630 | chr11_63956826_+ | UTR3 |
| ADediting_265631 | chr11_63956829_+ | UTR3 |
| ADediting_265632 | chr11_63956833_+ | UTR3 |
| ADediting_265633 | chr11_63956852_+ | UTR3 |
| ADediting_265634 | chr11_63956853_+ | UTR3 |
| ADediting_265635 | chr11_63956858_+ | UTR3 |
| ADediting_265636 | chr11_63956862_+ | UTR3 |
| ADediting_265637 | chr11_63956879_+ | UTR3 |
| ADediting_265638 | chr11_63956882_+ | UTR3 |
| ADediting_265639 | chr11_63956894_+ | UTR3 |
| ADediting_265640 | chr11_63956898_+ | UTR3 |
| ADediting_265641 | chr11_63956923_+ | UTR3 |
| ADediting_265642 | chr11_63956928_+ | UTR3 |
| ADediting_265643 | chr11_63956948_+ | UTR3 |
| ADediting_1610350 | chr11_63950005_+ | intronic |
| ADediting_1610351 | chr11_63950006_+ | intronic |
| ADediting_1610352 | chr11_63950018_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_265558 | chr11_63940107_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265559 | chr11_63940150_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265560 | chr11_63940151_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265561 | chr11_63940168_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265562 | chr11_63940190_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265563 | chr11_63944631_+ | SINE | Alu | Name=AluSz |
| ADediting_265564 | chr11_63944674_+ | SINE | Alu | Name=AluSz |
| ADediting_265565 | chr11_63944782_+ | SINE | Alu | Name=AluSz |
| ADediting_265566 | chr11_63944783_+ | SINE | Alu | Name=AluSz |
| ADediting_265567 | chr11_63944792_+ | SINE | Alu | Name=AluSz |
| ADediting_265568 | chr11_63944809_+ | SINE | Alu | Name=AluSz |
| ADediting_265569 | chr11_63944824_+ | SINE | Alu | Name=AluSz |
| ADediting_265570 | chr11_63944849_+ | SINE | Alu | Name=AluSz |
| ADediting_265571 | chr11_63946257_+ | SINE | Alu | Name=AluJb |
| ADediting_265572 | chr11_63946467_+ | SINE | Alu | Name=AluJb |
| ADediting_265573 | chr11_63947151_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265574 | chr11_63947152_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265575 | chr11_63947157_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265576 | chr11_63947197_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265577 | chr11_63947225_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265578 | chr11_63947287_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265579 | chr11_63947327_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265580 | chr11_63947339_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265581 | chr11_63947361_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265582 | chr11_63947386_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265583 | chr11_63947615_+ | SINE | Alu | Name=AluSz |
| ADediting_265584 | chr11_63947631_+ | SINE | Alu | Name=AluSz |
| ADediting_265585 | chr11_63947650_+ | SINE | Alu | Name=AluSz |
| ADediting_265586 | chr11_63947791_+ | SINE | Alu | Name=AluSg7 |
| ADediting_265587 | chr11_63947826_+ | SINE | Alu | Name=AluSg7 |
| ADediting_265588 | chr11_63947855_+ | SINE | Alu | Name=AluSg7 |
| ADediting_265589 | chr11_63947887_+ | SINE | Alu | Name=AluSg7 |
| ADediting_265590 | chr11_63947919_+ | SINE | Alu | Name=AluSg7 |
| ADediting_265591 | chr11_63947972_+ | SINE | Alu | Name=AluSg7 |
| ADediting_265592 | chr11_63947981_+ | SINE | Alu | Name=AluSg7 |
| ADediting_265593 | chr11_63947982_+ | SINE | Alu | Name=AluSg7 |
| ADediting_265594 | chr11_63947994_+ | SINE | Alu | Name=AluSg7 |
| ADediting_265595 | chr11_63948020_+ | SINE | Alu | Name=AluSz |
| ADediting_265596 | chr11_63948052_+ | SINE | Alu | Name=AluSz |
| ADediting_265597 | chr11_63948055_+ | SINE | Alu | Name=AluSz |
| ADediting_265598 | chr11_63948107_+ | SINE | Alu | Name=AluSz |
| ADediting_265599 | chr11_63948117_+ | SINE | Alu | Name=AluSz |
| ADediting_265600 | chr11_63948129_+ | SINE | Alu | Name=AluSz |
| ADediting_265601 | chr11_63948463_+ | SINE | Alu | Name=AluY |
| ADediting_265602 | chr11_63948780_+ | SINE | Alu | Name=AluJr |
| ADediting_265603 | chr11_63948781_+ | SINE | Alu | Name=AluJr |
| ADediting_265604 | chr11_63948979_+ | SINE | Alu | Name=AluJo |
| ADediting_265605 | chr11_63948999_+ | SINE | Alu | Name=AluJo |
| ADediting_265606 | chr11_63949079_+ | SINE | Alu | Name=AluJo |
| ADediting_265607 | chr11_63949098_+ | SINE | Alu | Name=AluJo |
| ADediting_265608 | chr11_63949106_+ | SINE | Alu | Name=AluJo |
| ADediting_265609 | chr11_63949143_+ | SINE | Alu | Name=AluJo |
| ADediting_265610 | chr11_63949171_+ | SINE | Alu | Name=AluJo |
| ADediting_265611 | chr11_63951424_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265612 | chr11_63951560_+ | SINE | Alu | Name=AluSq2 |
| ADediting_265613 | chr11_63956711_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265614 | chr11_63956713_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265615 | chr11_63956719_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265616 | chr11_63956720_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265617 | chr11_63956746_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265618 | chr11_63956755_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265619 | chr11_63956760_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265620 | chr11_63956765_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265621 | chr11_63956773_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265622 | chr11_63956774_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265623 | chr11_63956789_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265624 | chr11_63956796_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265625 | chr11_63956799_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265626 | chr11_63956810_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265627 | chr11_63956813_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265628 | chr11_63956816_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265629 | chr11_63956817_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265630 | chr11_63956826_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265631 | chr11_63956829_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265632 | chr11_63956833_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265633 | chr11_63956852_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265634 | chr11_63956853_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265635 | chr11_63956858_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265636 | chr11_63956862_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265637 | chr11_63956879_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265638 | chr11_63956882_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265639 | chr11_63956894_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265640 | chr11_63956898_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265641 | chr11_63956923_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265642 | chr11_63956928_+ | SINE | Alu | Name=AluSx1 |
| ADediting_265643 | chr11_63956948_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1610350 | chr11_63950005_+ | SINE | Alu | Name=AluY |
| ADediting_1610351 | chr11_63950006_+ | SINE | Alu | Name=AluY |
| ADediting_1610352 | chr11_63950018_+ | SINE | Alu | Name=AluY |
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RNA A-to-I editing events in the alternative splicing sites for NAA40 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NAA40 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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 | |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for NAA40 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for NAA40 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_265615 | chr11_63956719_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-513a-5p | chr11 | 63956713 | 63956719 | 7mer-m8 | 63956703 | 63956720 | 140 | -16.57 |
| ADediting_265615 | chr11_63956719_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-638 | chr11 | 63956718 | 63956724 | 7mer-1a | 63956700 | 63956724 | 147 | -30.39 |
| ADediting_265616 | chr11_63956720_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-3199 | chr11 | 63956718 | 63956724 | 7mer-1a | 63956705 | 63956724 | 141 | -18.98 |
| ADediting_265617 | chr11_63956746_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4707-3p | chr11 | 63956742 | 63956748 | 7mer-m8 | 63956728 | 63956749 | 162 | -27.77 |
| ADediting_265619 | chr11_63956760_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4726-3p | chr11 | 63956754 | 63956760 | 7mer-m8 | 63956739 | 63956761 | 158 | -28.33 |
| ADediting_265622 | chr11_63956774_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-12113 | chr11 | 63956767 | 63956773 | 7mer-m8 | 63956754 | 63956774 | 147 | -19.86 |
| ADediting_265622 | chr11_63956774_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4539 | chr11 | 63956767 | 63956773 | 7mer-m8 | 63956755 | 63956774 | 151 | -20 |
| ADediting_265623 | chr11_63956789_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4728-3p | chr11 | 63956785 | 63956791 | 7mer-m8 | 63956768 | 63956792 | 151 | -21.22 |
| ADediting_265623 | chr11_63956789_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-628-5p | chr11 | 63956784 | 63956790 | 7mer-m8 | 63956770 | 63956791 | 140 | -13.66 |
| ADediting_265623 | chr11_63956789_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-9718 | chr11 | 63956784 | 63956790 | 7mer-m8 | 63956772 | 63956791 | 169 | -26.61 |
| ADediting_265625 | chr11_63956799_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-3121-5p | chr11 | 63956793 | 63956799 | 7mer-m8 | 63956778 | 63956800 | 148 | -12.76 |
| ADediting_265626 | chr11_63956810_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-374b-3p | chr11 | 63956807 | 63956814 | 8mer-1a | 63956789 | 63956814 | 146 | -11.35 |
| ADediting_265626 | chr11_63956810_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4756-3p | chr11 | 63956803 | 63956809 | 7mer-m8 | 63956785 | 63956810 | 156 | -20.59 |
| ADediting_265627 | chr11_63956813_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-222-5p | chr11 | 63956807 | 63956814 | 8mer-1a | 63956793 | 63956814 | 140 | -9.31 |
| ADediting_265627 | chr11_63956813_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-30a-3p | chr11 | 63956809 | 63956816 | 8mer-1a | 63956790 | 63956816 | 157 | -15.52 |
| ADediting_265627 | chr11_63956813_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-30d-3p | chr11 | 63956809 | 63956816 | 8mer-1a | 63956790 | 63956816 | 158 | -16.23 |
| ADediting_265627 | chr11_63956813_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-30e-3p | chr11 | 63956809 | 63956816 | 8mer-1a | 63956794 | 63956816 | 153 | -11.41 |
| ADediting_265627 | chr11_63956813_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-936 | chr11 | 63956806 | 63956813 | 8mer-1a | 63956792 | 63956813 | 150 | -20.17 |
| ADediting_265628 | chr11_63956816_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-630 | chr11 | 63956814 | 63956821 | 8mer-1a | 63956800 | 63956821 | 164 | -15.52 |
| ADediting_265633 | chr11_63956852_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-513a-5p | chr11 | 63956846 | 63956852 | 7mer-m8 | 63956836 | 63956853 | 140 | -13.52 |
| ADediting_265633 | chr11_63956852_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-638 | chr11 | 63956851 | 63956857 | 7mer-1a | 63956833 | 63956857 | 145 | -29.81 |
| ADediting_265634 | chr11_63956853_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-8052 | chr11 | 63956851 | 63956857 | 7mer-1a | 63956838 | 63956857 | 141 | -20.45 |
| ADediting_265636 | chr11_63956862_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-1207-3p | chr11 | 63956855 | 63956861 | 7mer-m8 | 63956845 | 63956862 | 140 | -12.56 |
| ADediting_265636 | chr11_63956862_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-646 | chr11 | 63956857 | 63956863 | 7mer-m8 | 63956846 | 63956864 | 145 | -14.99 |
| ADediting_265638 | chr11_63956882_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6752-3p | chr11 | 63956875 | 63956881 | 7mer-m8 | 63956863 | 63956882 | 157 | -28.12 |
| ADediting_265638 | chr11_63956882_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6801-3p | chr11 | 63956876 | 63956883 | 8mer-1a | 63956864 | 63956883 | 148 | -23.84 |
| ADediting_265638 | chr11_63956882_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6810-3p | chr11 | 63956876 | 63956883 | 8mer-1a | 63956861 | 63956883 | 151 | -28.6 |
| ADediting_265639 | chr11_63956894_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-10400-3p | chr11 | 63956891 | 63956897 | 7mer-m8 | 63956879 | 63956898 | 148 | -25.83 |
| ADediting_265639 | chr11_63956894_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4437 | chr11 | 63956890 | 63956897 | 8mer-1a | 63956877 | 63956897 | 146 | -19.59 |
| ADediting_265639 | chr11_63956894_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4674 | chr11 | 63956891 | 63956897 | 7mer-m8 | 63956879 | 63956898 | 150 | -25.36 |
| ADediting_265641 | chr11_63956923_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4267 | chr11 | 63956916 | 63956922 | 7mer-m8 | 63956908 | 63956923 | 141 | -17.69 |
| ADediting_265641 | chr11_63956923_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-7977 | chr11 | 63956918 | 63956924 | 7mer-m8 | 63956907 | 63956925 | 154 | -21.86 |
| ADediting_265642 | chr11_63956928_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4634 | chr11 | 63956925 | 63956932 | 8mer-1a | 63956912 | 63956932 | 146 | -21.71 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_265614 | chr11_63956713_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-3934-5p | chr11 | 63956710 | 63956716 | 7mer-m8 | 63956695 | 63956717 | 147 | -20.31 |
| ADediting_265614 | chr11_63956713_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-552-3p | chr11 | 63956711 | 63956718 | 8mer-1a | 63956698 | 63956718 | 140 | -13.88 |
| ADediting_265615 | chr11_63956719_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-10399-5p | chr11 | 63956714 | 63956720 | 7mer-m8 | 63956700 | 63956721 | 144 | -10.26 |
| ADediting_265615 | chr11_63956719_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6504-3p | chr11 | 63956714 | 63956720 | 7mer-m8 | 63956700 | 63956721 | 145 | -14.35 |
| ADediting_265616 | chr11_63956720_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-10399-5p | chr11 | 63956714 | 63956720 | 7mer-m8 | 63956700 | 63956721 | 144 | -10.26 |
| ADediting_265616 | chr11_63956720_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-5089-5p | chr11 | 63956718 | 63956724 | 7mer-m8 | 63956704 | 63956725 | 148 | -13.62 |
| ADediting_265616 | chr11_63956720_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6504-3p | chr11 | 63956714 | 63956720 | 7mer-m8 | 63956700 | 63956721 | 145 | -14.35 |
| ADediting_265617 | chr11_63956746_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6747-3p | chr11 | 63956741 | 63956747 | 7mer-m8 | 63956727 | 63956748 | 150 | -22.22 |
| ADediting_265618 | chr11_63956755_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-125a-3p | chr11 | 63956752 | 63956759 | 8mer-1a | 63956738 | 63956759 | 148 | -17.8 |
| ADediting_265618 | chr11_63956755_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-7973 | chr11 | 63956749 | 63956755 | 7mer-m8 | 63956737 | 63956756 | 140 | -13.09 |
| ADediting_265619 | chr11_63956760_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6790-3p | chr11 | 63956758 | 63956764 | 7mer-1a | 63956743 | 63956764 | 145 | -26.44 |
| ADediting_265623 | chr11_63956789_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4716-5p | chr11 | 63956787 | 63956793 | 7mer-m8 | 63956773 | 63956794 | 140 | -13.86 |
| ADediting_265624 | chr11_63956796_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-3140-3p | chr11 | 63956794 | 63956800 | 7mer-m8 | 63956776 | 63956801 | 141 | -15.09 |
| ADediting_265624 | chr11_63956796_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4659a-5p | chr11 | 63956789 | 63956796 | 8mer-1a | 63956776 | 63956796 | 147 | -11.74 |
| ADediting_265624 | chr11_63956796_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4659b-5p | chr11 | 63956789 | 63956796 | 8mer-1a | 63956779 | 63956796 | 147 | -13.85 |
| ADediting_265624 | chr11_63956796_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4776-3p | chr11 | 63956790 | 63956797 | 8mer-1a | 63956774 | 63956797 | 153 | -16.96 |
| ADediting_265625 | chr11_63956799_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-3119 | chr11 | 63956795 | 63956801 | 7mer-m8 | 63956784 | 63956802 | 148 | -11.91 |
| ADediting_265625 | chr11_63956799_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-3140-3p | chr11 | 63956794 | 63956800 | 7mer-m8 | 63956776 | 63956801 | 141 | -15.09 |
| ADediting_265626 | chr11_63956810_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6832-5p | chr11 | 63956804 | 63956810 | 7mer-m8 | 63956789 | 63956811 | 142 | -15.7 |
| ADediting_265630 | chr11_63956826_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-29a-5p | chr11 | 63956823 | 63956829 | 7mer-m8 | 63956810 | 63956830 | 153 | -9.15 |
| ADediting_265631 | chr11_63956829_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-29a-5p | chr11 | 63956823 | 63956829 | 7mer-m8 | 63956810 | 63956830 | 153 | -9.15 |
| ADediting_265631 | chr11_63956829_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-3085-3p | chr11 | 63956827 | 63956833 | 7mer-m8 | 63956814 | 63956834 | 144 | -14.81 |
| ADediting_265631 | chr11_63956829_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6504-5p | chr11 | 63956827 | 63956833 | 7mer-m8 | 63956812 | 63956834 | 148 | -17.22 |
| ADediting_265632 | chr11_63956833_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-3085-3p | chr11 | 63956827 | 63956833 | 7mer-m8 | 63956814 | 63956834 | 144 | -14.81 |
| ADediting_265632 | chr11_63956833_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6504-5p | chr11 | 63956827 | 63956833 | 7mer-m8 | 63956812 | 63956834 | 148 | -17.22 |
| ADediting_265633 | chr11_63956852_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-10399-5p | chr11 | 63956847 | 63956853 | 7mer-m8 | 63956837 | 63956854 | 142 | -10.94 |
| ADediting_265633 | chr11_63956852_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-7151-3p | chr11 | 63956845 | 63956852 | 8mer-1a | 63956832 | 63956852 | 150 | -15.03 |
| ADediting_265634 | chr11_63956853_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-10399-5p | chr11 | 63956847 | 63956853 | 7mer-m8 | 63956837 | 63956854 | 142 | -10.94 |
| ADediting_265634 | chr11_63956853_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-5089-5p | chr11 | 63956851 | 63956857 | 7mer-m8 | 63956839 | 63956858 | 149 | -11.72 |
| ADediting_265635 | chr11_63956858_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-5089-5p | chr11 | 63956851 | 63956857 | 7mer-m8 | 63956839 | 63956858 | 149 | -11.72 |
| ADediting_265635 | chr11_63956858_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6506-5p | chr11 | 63956852 | 63956858 | 7mer-m8 | 63956837 | 63956859 | 144 | -16.08 |
| ADediting_265637 | chr11_63956879_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-1976 | chr11 | 63956876 | 63956883 | 8mer-1a | 63956863 | 63956883 | 149 | -24.39 |
| ADediting_265637 | chr11_63956879_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6747-3p | chr11 | 63956874 | 63956881 | 8mer-1a | 63956859 | 63956881 | 149 | -23.68 |
| ADediting_265638 | chr11_63956882_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-1976 | chr11 | 63956876 | 63956883 | 8mer-1a | 63956863 | 63956883 | 149 | -24.39 |
| ADediting_265639 | chr11_63956894_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-498-5p | chr11 | 63956887 | 63956893 | 7mer-m8 | 63956872 | 63956894 | 147 | -12.36 |
| ADediting_265640 | chr11_63956898_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-1343-3p | chr11 | 63956894 | 63956900 | 7mer-m8 | 63956878 | 63956901 | 150 | -24.19 |
| ADediting_265640 | chr11_63956898_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6742-3p | chr11 | 63956893 | 63956900 | 8mer-1a | 63956881 | 63956900 | 145 | -15.36 |
| ADediting_265640 | chr11_63956898_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-6783-3p | chr11 | 63956894 | 63956900 | 7mer-m8 | 63956881 | 63956901 | 146 | -18.84 |
| ADediting_265641 | chr11_63956923_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4695-3p | chr11 | 63956920 | 63956927 | 8mer-1a | 63956904 | 63956927 | 154 | -26.63 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-381-3p | chr11 | 63957271 | 63957277 | 7mer-m8 | 63957258 | 63957278 | 154 | -14.43 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-641 | chr11 | 63956537 | 63956543 | 7mer-m8 | 63956519 | 63956544 | 150 | -18.98 |
| ADediting_496066 | chr15_66496985_- | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4512 | chr11 | 63955540 | 63955546 | 7mer-m8 | 63955528 | 63955547 | 147 | -18.73 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-4775 | chr11 | 63956822 | 63956828 | 7mer-m8 | 63956807 | 63956829 | 157 | -8.99 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-5585-3p | chr11 | 63956623 | 63956629 | 7mer-m8 | 63956606 | 63956630 | 157 | -21.92 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-337-3p | chr11 | 63957125 | 63957131 | 7mer-m8 | 63957112 | 63957132 | 150 | -11.3 |
| ADediting_291761 | chr11_93733708_- | ENSG00000110583.13 | ENST00000377793.9 | NAA40-202 | hsa-miR-1304-3p | chr11 | 63955583 | 63955589 | 7mer-m8 | 63955569 | 63955590 | 153 | -20.2 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for NAA40 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000377793.9 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_265613 | ENST00000377793.9 | chr11_63956711_+ | 3041 | -1314.10 | -1314.10 | -1340.70 |
| ADediting_265614 | ENST00000377793.9 | chr11_63956713_+ | 3043 | -1314.10 | -1314.10 | -1340.70 |
| ADediting_265615 | ENST00000377793.9 | chr11_63956719_+ | 3049 | -1314.20 | -1314.10 | -1340.70 |
| ADediting_265616 | ENST00000377793.9 | chr11_63956720_+ | 3050 | -1315.80 | -1314.10 | -1340.70 |
| ADediting_265617 | ENST00000377793.9 | chr11_63956746_+ | 3076 | -1313.40 | -1314.10 | -1340.70 |
| ADediting_265618 | ENST00000377793.9 | chr11_63956755_+ | 3085 | -1314.40 | -1314.10 | -1340.70 |
| ADediting_265619 | ENST00000377793.9 | chr11_63956760_+ | 3090 | -1313.30 | -1314.10 | -1340.70 |
| ADediting_265620 | ENST00000377793.9 | chr11_63956765_+ | 3095 | -1315.90 | -1314.10 | -1340.70 |
| ADediting_265621 | ENST00000377793.9 | chr11_63956773_+ | 3103 | -1314.10 | -1314.10 | -1340.70 |
| ADediting_265622 | ENST00000377793.9 | chr11_63956774_+ | 3104 | -1314.50 | -1314.10 | -1340.70 |
| ADediting_265623 | ENST00000377793.9 | chr11_63956789_+ | 3119 | -1314.10 | -1314.10 | -1340.70 |
| ADediting_265624 | ENST00000377793.9 | chr11_63956796_+ | 3126 | -1314.90 | -1314.10 | -1340.70 |
| ADediting_265625 | ENST00000377793.9 | chr11_63956799_+ | 3129 | -1314.00 | -1314.10 | -1340.70 |
| ADediting_265626 | ENST00000377793.9 | chr11_63956810_+ | 3140 | -1312.80 | -1314.10 | -1340.70 |
| ADediting_265627 | ENST00000377793.9 | chr11_63956813_+ | 3143 | -1314.30 | -1314.10 | -1340.70 |
| ADediting_265628 | ENST00000377793.9 | chr11_63956816_+ | 3146 | -1314.50 | -1314.10 | -1340.70 |
| ADediting_265629 | ENST00000377793.9 | chr11_63956817_+ | 3147 | -1315.30 | -1314.10 | -1340.70 |
| ADediting_265630 | ENST00000377793.9 | chr11_63956826_+ | 3156 | -1314.00 | -1314.10 | -1340.70 |
| ADediting_265631 | ENST00000377793.9 | chr11_63956829_+ | 3159 | -1313.90 | -1314.10 | -1340.70 |
| ADediting_265632 | ENST00000377793.9 | chr11_63956833_+ | 3163 | -1314.00 | -1314.10 | -1340.70 |
| ADediting_265633 | ENST00000377793.9 | chr11_63956852_+ | 3182 | -1313.60 | -1314.10 | -1340.70 |
| ADediting_265634 | ENST00000377793.9 | chr11_63956853_+ | 3183 | -1316.00 | -1314.10 | -1340.70 |
| ADediting_265635 | ENST00000377793.9 | chr11_63956858_+ | 3188 | -1315.30 | -1314.10 | -1340.70 |
| ADediting_265636 | ENST00000377793.9 | chr11_63956862_+ | 3192 | -1314.50 | -1314.10 | -1340.70 |
| ADediting_265637 | ENST00000377793.9 | chr11_63956879_+ | 3209 | -1314.00 | -1314.10 | -1340.70 |
| ADediting_265638 | ENST00000377793.9 | chr11_63956882_+ | 3212 | -1313.20 | -1314.10 | -1340.70 |
| ADediting_265639 | ENST00000377793.9 | chr11_63956894_+ | 3224 | -1318.20 | -1314.10 | -1340.70 |
| ADediting_265640 | ENST00000377793.9 | chr11_63956898_+ | 3228 | -1315.10 | -1314.10 | -1340.70 |
| ADediting_265641 | ENST00000377793.9 | chr11_63956923_+ | 3253 | -1314.30 | -1314.10 | -1340.70 |
| ADediting_265642 | ENST00000377793.9 | chr11_63956928_+ | 3258 | -1315.20 | -1314.10 | -1340.70 |
| ADediting_265643 | ENST00000377793.9 | chr11_63956948_+ | 3278 | -1320.10 | -1314.10 | -1340.70 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for NAA40 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_265571 | chr11_63946257_+ | 0.00977854171259712 | 0.210341265901718 | 8.17684003099713e-05 | 0.315993530361788 | 0.0109186987791205 | 0.207293698434893 |
| TCX | ADediting_265617 | chr11_63956746_+ | 0.0279942415594467 | 0.179456390763275 | 0.000131996608343495 | 0.307114161934719 | 0.74172065331314 | -0.0271317504704066 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 7.16065914259661e-34 | 0.616729467213757 | 6.67698032115263e-27 | 0.559220288755232 | 8.81100193680553e-36 | 0.630645923419403 |
| AC | 5.84934194399261e-64 | 0.82697223345159 | 2.74014073028103e-40 | 0.714113514275484 | 6.06387267269087e-12 | 0.417112979219128 |
| PCC | 5.54199694859422e-46 | 0.811553953251638 | 5.35585334232671e-38 | 0.765212695974232 | 4.32088792004893e-05 | 0.291380083009515 |
| CER | 1.3915910743174e-12 | 0.537052209764651 | 0.000228481562639861 | 0.296581275484179 | 0.147952581593081 | -0.118705758343631 |
| TCX | 2.14652501675327e-23 | 0.699960266963549 | 9.29401475644709e-12 | 0.519842323884471 | 2.22870233789429e-05 | 0.338786244161001 |
| FP | 1.96440401578681e-25 | 0.679284225571641 | 1.89183959578426e-19 | 0.6090201665645 | 4.46822039621672e-11 | 0.468042757529162 |
| IFG | 0.000217161888644148 | 0.67455463733548 | 2.03629231461573e-07 | 0.83540804288402 | 0.031899299616665 | 0.430043210328001 |
| PG | 6.63188039265206e-11 | 0.455270150272304 | 8.27996601428311e-14 | 0.511798889645471 | 0.116354767007596 | 0.115529962890773 |
| STG | 1.44939171899535e-11 | 0.654540345033994 | 3.42883709363745e-06 | 0.48209142435584 | 0.000317431861119499 | 0.383476432077778 |
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Relation with AD stages for NAA40 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| IFG | ADediting_265617 | chr11_63956746_+ | 0.0354713369979928 | 0.422303326441651 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| TCX | 0.000360352331961849 | 0.340150743476655 |
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RelatedDrugs for NAA40 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for NAA40 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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