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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for CLMN |
 Gene summary |
| Gene information | Gene symbol | CLMN | Gene ID | 79789 |
| Gene name | calmin | |
| Synonyms | - | |
| Cytomap | 14q32.13 | |
| Type of gene | protein-coding | |
| Description | calmincalmin (calponin-like, transmembrane)calponin-like transmembrane domain protein | |
| Modification date | 20200313 | |
| UniProtAcc | Q96JQ2, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for CLMN |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_461138(95184842, -), ADediting_461139(95184846, -), ADediting_461140(95184850, -), ADediting_461141(95184863, -), ADediting_461142(95184864, -), ADediting_461143(95184865, -), ADediting_461144(95184891, -), ADediting_461145(95184892, -), ADediting_461146(95184904, -), ADediting_461147(95184917, -), ADediting_461148(95184942, -), ADediting_461149(95184994, -), ADediting_461150(95184997, -), ADediting_461151(95184998, -), ADediting_461152(95185006, -), ADediting_461153(95185019, -), ADediting_461154(95185024, -), ADediting_461155(95185038, -), ADediting_461156(95185044, -), ADediting_461157(95185054, -), ADediting_461158(95185070, -), ADediting_461159(95185097, -), ADediting_461160(95185100, -), ADediting_461161(95185104, -), ADediting_461162(95185489, -), ADediting_461163(95186607, -), ADediting_461164(95186617, -), ADediting_461165(95186633, -), ADediting_461166(95186643, -), ADediting_461167(95186648, -), ADediting_461168(95186676, -), ADediting_461169(95186689, -), ADediting_461170(95186693, -), ADediting_461171(95186697, -), ADediting_461172(95186703, -), ADediting_461173(95186705, -), ADediting_461174(95186711, -), ADediting_461175(95186779, -), ADediting_461176(95186780, -), ADediting_461177(95186784, -), ADediting_461178(95186788, -), ADediting_461179(95186793, -), ADediting_461180(95186807, -), ADediting_461181(95186811, -), ADediting_461182(95186812, -), ADediting_461183(95186817, -), ADediting_461184(95186833, -), ADediting_461185(95186834, -), ADediting_461186(95186836, -), ADediting_461187(95186840, -), ADediting_461188(95186850, -), ADediting_461189(95186855, -), ADediting_461190(95186877, -), ADediting_461191(95186878, -), ADediting_461192(95193319, -), ADediting_461193(95198117, -), ADediting_461194(95198148, -), ADediting_461195(95198187, -), ADediting_461196(95198188, -), ADediting_461197(95200676, -), ADediting_461198(95200826, -), ADediting_461199(95201639, -), ADediting_461200(95201667, -), ADediting_461201(95202430, -), ADediting_461202(95249730, -), ADediting_461203(95249813, -), ADediting_461204(95260252, -), ADediting_461205(95260342, -), ADediting_461206(95261121, -), ADediting_461207(95261577, -), ADediting_461208(95262731, -), ADediting_461209(95262740, -), ADediting_461210(95262749, -), ADediting_461211(95262770, -), ADediting_461212(95262852, -), ADediting_461213(95264194, -), ADediting_461214(95264267, -), ADediting_461215(95264996, -), ADediting_461216(95265002, -), ADediting_461217(95265120, -), ADediting_461218(95265197, -), ADediting_461219(95268906, -), ADediting_461220(95268942, -), ADediting_461221(95268952, -), ADediting_461222(95269023, -), ADediting_461223(95271263, -), ADediting_461224(95274736, -), ADediting_461225(95274737, -), ADediting_461226(95274786, -), ADediting_461227(95274787, -), ADediting_461228(95274857, -), ADediting_461229(95274863, -), ADediting_461230(95274867, -), ADediting_461231(95274896, -), ADediting_461232(95274897, -), ADediting_461233(95275725, -), ADediting_461234(95275787, -), ADediting_461235(95275791, -), ADediting_461236(95275795, -), ADediting_461237(95275800, -), ADediting_461238(95275801, -), ADediting_461239(95275871, -), ADediting_461240(95275890, -), ADediting_461241(95275927, -), ADediting_461242(95275935, -), ADediting_461243(95275936, -), ADediting_461244(95275958, -), ADediting_461245(95277695, -), ADediting_461246(95277766, -), ADediting_461247(95277792, -), ADediting_461248(95277815, -), ADediting_461249(95277831, -), ADediting_461250(95277834, -), ADediting_461251(95277858, -), ADediting_461252(95277873, -), ADediting_461253(95277893, -), ADediting_461254(95277899, -), ADediting_461255(95277900, -), ADediting_461256(95279539, -), ADediting_461257(95279590, -), ADediting_461258(95279594, -), ADediting_461259(95279602, -), ADediting_461260(95279610, -), ADediting_461261(95279616, -), ADediting_461262(95279635, -), ADediting_461263(95279661, -), ADediting_461264(95279671, -), ADediting_1538463(95186601, -), ADediting_1538464(95264308, -), ADediting_1620912(95261122, -), ADediting_1620913(95261525, -), ADediting_1620914(95262705, -), ADediting_1620915(95264168, -), ADediting_1620916(95264204, -), ADediting_1620917(95264228, -), ADediting_1620918(95270661, -), ADediting_1620919(95274799, -), ADediting_1620920(95274807, -), ADediting_1620921(95274835, -), ADediting_1620922(95275823, -), ADediting_1620923(95275827, -), ADediting_1620924(95275831, -), ADediting_1620925(95275836, -), ADediting_1620926(95275845, -), ADediting_1620927(95275851, -), ADediting_1620928(95275859, -), ADediting_1620929(95289328, -), |
Top |
RNA editing positional annotations for CLMN using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| ADediting_461192 | chr14_95193319_- | synonymous SNV | ENST00000556441.1 | c.A39G | p.K13K | . | . | . |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_461138 | chr14_95184842_- | UTR3 |
| ADediting_461139 | chr14_95184846_- | UTR3 |
| ADediting_461140 | chr14_95184850_- | UTR3 |
| ADediting_461141 | chr14_95184863_- | UTR3 |
| ADediting_461142 | chr14_95184864_- | UTR3 |
| ADediting_461143 | chr14_95184865_- | UTR3 |
| ADediting_461144 | chr14_95184891_- | UTR3 |
| ADediting_461145 | chr14_95184892_- | UTR3 |
| ADediting_461146 | chr14_95184904_- | UTR3 |
| ADediting_461147 | chr14_95184917_- | UTR3 |
| ADediting_461148 | chr14_95184942_- | UTR3 |
| ADediting_461149 | chr14_95184994_- | UTR3 |
| ADediting_461150 | chr14_95184997_- | UTR3 |
| ADediting_461151 | chr14_95184998_- | UTR3 |
| ADediting_461152 | chr14_95185006_- | UTR3 |
| ADediting_461153 | chr14_95185019_- | UTR3 |
| ADediting_461154 | chr14_95185024_- | UTR3 |
| ADediting_461155 | chr14_95185038_- | UTR3 |
| ADediting_461156 | chr14_95185044_- | UTR3 |
| ADediting_461157 | chr14_95185054_- | UTR3 |
| ADediting_461158 | chr14_95185070_- | UTR3 |
| ADediting_461159 | chr14_95185097_- | UTR3 |
| ADediting_461160 | chr14_95185100_- | UTR3 |
| ADediting_461161 | chr14_95185104_- | UTR3 |
| ADediting_461162 | chr14_95185489_- | ncRNA_exonic |
| ADediting_461163 | chr14_95186607_- | UTR3 |
| ADediting_461164 | chr14_95186617_- | UTR3 |
| ADediting_461165 | chr14_95186633_- | UTR3 |
| ADediting_461166 | chr14_95186643_- | UTR3 |
| ADediting_461167 | chr14_95186648_- | UTR3 |
| ADediting_461168 | chr14_95186676_- | UTR3 |
| ADediting_461169 | chr14_95186689_- | UTR3 |
| ADediting_461170 | chr14_95186693_- | UTR3 |
| ADediting_461171 | chr14_95186697_- | UTR3 |
| ADediting_461172 | chr14_95186703_- | UTR3 |
| ADediting_461173 | chr14_95186705_- | UTR3 |
| ADediting_461174 | chr14_95186711_- | UTR3 |
| ADediting_461175 | chr14_95186779_- | UTR3 |
| ADediting_461176 | chr14_95186780_- | UTR3 |
| ADediting_461177 | chr14_95186784_- | UTR3 |
| ADediting_461178 | chr14_95186788_- | UTR3 |
| ADediting_461179 | chr14_95186793_- | UTR3 |
| ADediting_461180 | chr14_95186807_- | UTR3 |
| ADediting_461181 | chr14_95186811_- | UTR3 |
| ADediting_461182 | chr14_95186812_- | UTR3 |
| ADediting_461183 | chr14_95186817_- | UTR3 |
| ADediting_461184 | chr14_95186833_- | UTR3 |
| ADediting_461185 | chr14_95186834_- | UTR3 |
| ADediting_461186 | chr14_95186836_- | UTR3 |
| ADediting_461187 | chr14_95186840_- | UTR3 |
| ADediting_461188 | chr14_95186850_- | UTR3 |
| ADediting_461189 | chr14_95186855_- | UTR3 |
| ADediting_461190 | chr14_95186877_- | UTR3 |
| ADediting_461191 | chr14_95186878_- | UTR3 |
| ADediting_461192 | chr14_95193319_- | exonic |
| ADediting_461193 | chr14_95198117_- | intronic |
| ADediting_461194 | chr14_95198148_- | intronic |
| ADediting_461195 | chr14_95198187_- | intronic |
| ADediting_461196 | chr14_95198188_- | intronic |
| ADediting_461197 | chr14_95200676_- | intronic |
| ADediting_461198 | chr14_95200826_- | intronic |
| ADediting_461199 | chr14_95201639_- | intronic |
| ADediting_461200 | chr14_95201667_- | intronic |
| ADediting_461201 | chr14_95202430_- | intronic |
| ADediting_461202 | chr14_95249730_- | intronic |
| ADediting_461203 | chr14_95249813_- | intronic |
| ADediting_461204 | chr14_95260252_- | intronic |
| ADediting_461205 | chr14_95260342_- | intronic |
| ADediting_461206 | chr14_95261121_- | intronic |
| ADediting_461207 | chr14_95261577_- | intronic |
| ADediting_461208 | chr14_95262731_- | intronic |
| ADediting_461209 | chr14_95262740_- | intronic |
| ADediting_461210 | chr14_95262749_- | intronic |
| ADediting_461211 | chr14_95262770_- | intronic |
| ADediting_461212 | chr14_95262852_- | intronic |
| ADediting_461213 | chr14_95264194_- | intronic |
| ADediting_461214 | chr14_95264267_- | intronic |
| ADediting_461215 | chr14_95264996_- | intronic |
| ADediting_461216 | chr14_95265002_- | intronic |
| ADediting_461217 | chr14_95265120_- | intronic |
| ADediting_461218 | chr14_95265197_- | intronic |
| ADediting_461219 | chr14_95268906_- | intronic |
| ADediting_461220 | chr14_95268942_- | intronic |
| ADediting_461221 | chr14_95268952_- | intronic |
| ADediting_461222 | chr14_95269023_- | intronic |
| ADediting_461223 | chr14_95271263_- | intronic |
| ADediting_461224 | chr14_95274736_- | intronic |
| ADediting_461225 | chr14_95274737_- | intronic |
| ADediting_461226 | chr14_95274786_- | intronic |
| ADediting_461227 | chr14_95274787_- | intronic |
| ADediting_461228 | chr14_95274857_- | intronic |
| ADediting_461229 | chr14_95274863_- | intronic |
| ADediting_461230 | chr14_95274867_- | intronic |
| ADediting_461231 | chr14_95274896_- | intronic |
| ADediting_461232 | chr14_95274897_- | intronic |
| ADediting_461233 | chr14_95275725_- | intronic |
| ADediting_461234 | chr14_95275787_- | intronic |
| ADediting_461235 | chr14_95275791_- | intronic |
| ADediting_461236 | chr14_95275795_- | intronic |
| ADediting_461237 | chr14_95275800_- | intronic |
| ADediting_461238 | chr14_95275801_- | intronic |
| ADediting_461239 | chr14_95275871_- | intronic |
| ADediting_461240 | chr14_95275890_- | intronic |
| ADediting_461241 | chr14_95275927_- | intronic |
| ADediting_461242 | chr14_95275935_- | intronic |
| ADediting_461243 | chr14_95275936_- | intronic |
| ADediting_461244 | chr14_95275958_- | intronic |
| ADediting_461245 | chr14_95277695_- | intronic |
| ADediting_461246 | chr14_95277766_- | intronic |
| ADediting_461247 | chr14_95277792_- | intronic |
| ADediting_461248 | chr14_95277815_- | intronic |
| ADediting_461249 | chr14_95277831_- | intronic |
| ADediting_461250 | chr14_95277834_- | intronic |
| ADediting_461251 | chr14_95277858_- | intronic |
| ADediting_461252 | chr14_95277873_- | intronic |
| ADediting_461253 | chr14_95277893_- | intronic |
| ADediting_461254 | chr14_95277899_- | intronic |
| ADediting_461255 | chr14_95277900_- | intronic |
| ADediting_461256 | chr14_95279539_- | intronic |
| ADediting_461257 | chr14_95279590_- | intronic |
| ADediting_461258 | chr14_95279594_- | intronic |
| ADediting_461259 | chr14_95279602_- | intronic |
| ADediting_461260 | chr14_95279610_- | intronic |
| ADediting_461261 | chr14_95279616_- | intronic |
| ADediting_461262 | chr14_95279635_- | intronic |
| ADediting_461263 | chr14_95279661_- | intronic |
| ADediting_461264 | chr14_95279671_- | intronic |
| ADediting_1538463 | chr14_95186601_- | UTR3 |
| ADediting_1538464 | chr14_95264308_- | intronic |
| ADediting_1620912 | chr14_95261122_- | intronic |
| ADediting_1620913 | chr14_95261525_- | intronic |
| ADediting_1620914 | chr14_95262705_- | intronic |
| ADediting_1620915 | chr14_95264168_- | intronic |
| ADediting_1620916 | chr14_95264204_- | intronic |
| ADediting_1620917 | chr14_95264228_- | intronic |
| ADediting_1620918 | chr14_95270661_- | intronic |
| ADediting_1620919 | chr14_95274799_- | intronic |
| ADediting_1620920 | chr14_95274807_- | intronic |
| ADediting_1620921 | chr14_95274835_- | intronic |
| ADediting_1620922 | chr14_95275823_- | intronic |
| ADediting_1620923 | chr14_95275827_- | intronic |
| ADediting_1620924 | chr14_95275831_- | intronic |
| ADediting_1620925 | chr14_95275836_- | intronic |
| ADediting_1620926 | chr14_95275845_- | intronic |
| ADediting_1620927 | chr14_95275851_- | intronic |
| ADediting_1620928 | chr14_95275859_- | intronic |
| ADediting_1620929 | chr14_95289328_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_461138 | chr14_95184842_- | SINE | Alu | Name=AluJr |
| ADediting_461139 | chr14_95184846_- | SINE | Alu | Name=AluJr |
| ADediting_461140 | chr14_95184850_- | SINE | Alu | Name=AluJr |
| ADediting_461141 | chr14_95184863_- | SINE | Alu | Name=AluJr |
| ADediting_461142 | chr14_95184864_- | SINE | Alu | Name=AluJr |
| ADediting_461143 | chr14_95184865_- | SINE | Alu | Name=AluJr |
| ADediting_461144 | chr14_95184891_- | SINE | Alu | Name=AluJr |
| ADediting_461145 | chr14_95184892_- | SINE | Alu | Name=AluJr |
| ADediting_461146 | chr14_95184904_- | SINE | Alu | Name=AluJr |
| ADediting_461147 | chr14_95184917_- | SINE | Alu | Name=AluJr |
| ADediting_461148 | chr14_95184942_- | SINE | Alu | Name=AluJr |
| ADediting_461149 | chr14_95184994_- | SINE | Alu | Name=AluJr |
| ADediting_461150 | chr14_95184997_- | SINE | Alu | Name=AluJr |
| ADediting_461151 | chr14_95184998_- | SINE | Alu | Name=AluJr |
| ADediting_461152 | chr14_95185006_- | SINE | Alu | Name=AluJr |
| ADediting_461153 | chr14_95185019_- | SINE | Alu | Name=AluJr |
| ADediting_461154 | chr14_95185024_- | SINE | Alu | Name=AluJr |
| ADediting_461155 | chr14_95185038_- | SINE | Alu | Name=AluJr |
| ADediting_461156 | chr14_95185044_- | SINE | Alu | Name=AluJr |
| ADediting_461157 | chr14_95185054_- | SINE | Alu | Name=AluJr |
| ADediting_461158 | chr14_95185070_- | SINE | Alu | Name=AluJr |
| ADediting_461159 | chr14_95185097_- | SINE | Alu | Name=AluJr |
| ADediting_461160 | chr14_95185100_- | SINE | Alu | Name=AluJr |
| ADediting_461161 | chr14_95185104_- | SINE | Alu | Name=AluJr |
| ADediting_461163 | chr14_95186607_- | SINE | Alu | Name=AluJr4 |
| ADediting_461164 | chr14_95186617_- | SINE | Alu | Name=AluJr4 |
| ADediting_461165 | chr14_95186633_- | SINE | Alu | Name=AluJr4 |
| ADediting_461166 | chr14_95186643_- | SINE | Alu | Name=AluJr4 |
| ADediting_461167 | chr14_95186648_- | SINE | Alu | Name=AluJr4 |
| ADediting_461168 | chr14_95186676_- | SINE | Alu | Name=AluJr4 |
| ADediting_461169 | chr14_95186689_- | SINE | Alu | Name=AluJr4 |
| ADediting_461170 | chr14_95186693_- | SINE | Alu | Name=AluJr4 |
| ADediting_461171 | chr14_95186697_- | SINE | Alu | Name=AluJr4 |
| ADediting_461172 | chr14_95186703_- | SINE | Alu | Name=AluJr4 |
| ADediting_461173 | chr14_95186705_- | SINE | Alu | Name=AluJr4 |
| ADediting_461174 | chr14_95186711_- | SINE | Alu | Name=AluJr4 |
| ADediting_461175 | chr14_95186779_- | SINE | Alu | Name=AluJr4 |
| ADediting_461176 | chr14_95186780_- | SINE | Alu | Name=AluJr4 |
| ADediting_461177 | chr14_95186784_- | SINE | Alu | Name=AluJr4 |
| ADediting_461178 | chr14_95186788_- | SINE | Alu | Name=AluJr4 |
| ADediting_461179 | chr14_95186793_- | SINE | Alu | Name=AluJr4 |
| ADediting_461180 | chr14_95186807_- | SINE | Alu | Name=AluJr4 |
| ADediting_461181 | chr14_95186811_- | SINE | Alu | Name=AluJr4 |
| ADediting_461182 | chr14_95186812_- | SINE | Alu | Name=AluJr4 |
| ADediting_461183 | chr14_95186817_- | SINE | Alu | Name=AluJr4 |
| ADediting_461184 | chr14_95186833_- | SINE | Alu | Name=AluJr4 |
| ADediting_461185 | chr14_95186834_- | SINE | Alu | Name=AluJr4 |
| ADediting_461186 | chr14_95186836_- | SINE | Alu | Name=AluJr4 |
| ADediting_461187 | chr14_95186840_- | SINE | Alu | Name=AluJr4 |
| ADediting_461193 | chr14_95198117_- | SINE | Alu | Name=AluSq2 |
| ADediting_461194 | chr14_95198148_- | SINE | Alu | Name=AluSq2 |
| ADediting_461195 | chr14_95198187_- | SINE | Alu | Name=AluSq2 |
| ADediting_461196 | chr14_95198188_- | SINE | Alu | Name=AluSq2 |
| ADediting_461199 | chr14_95201639_- | LINE | L1 | Name=L1PA8 |
| ADediting_461200 | chr14_95201667_- | LINE | L1 | Name=L1PA8 |
| ADediting_461201 | chr14_95202430_- | LINE | L1 | Name=L1PA16 |
| ADediting_461202 | chr14_95249730_- | SINE | Alu | Name=AluSc8 |
| ADediting_461203 | chr14_95249813_- | SINE | Alu | Name=AluSc8 |
| ADediting_461204 | chr14_95260252_- | SINE | Alu | Name=AluYf1 |
| ADediting_461205 | chr14_95260342_- | SINE | Alu | Name=AluYf1 |
| ADediting_461206 | chr14_95261121_- | DNA | TcMar-Tigger | Name=Tigger17a |
| ADediting_461207 | chr14_95261577_- | DNA | TcMar-Tigger | Name=Tigger17c |
| ADediting_461208 | chr14_95262731_- | SINE | Alu | Name=AluJo |
| ADediting_461209 | chr14_95262740_- | SINE | Alu | Name=AluJo |
| ADediting_461210 | chr14_95262749_- | SINE | Alu | Name=AluJo |
| ADediting_461211 | chr14_95262770_- | SINE | Alu | Name=AluJo |
| ADediting_461212 | chr14_95262852_- | SINE | Alu | Name=AluJo |
| ADediting_461213 | chr14_95264194_- | SINE | Alu | Name=AluJb |
| ADediting_461214 | chr14_95264267_- | SINE | Alu | Name=AluJb |
| ADediting_461215 | chr14_95264996_- | SINE | Alu | Name=AluJb |
| ADediting_461216 | chr14_95265002_- | SINE | Alu | Name=AluJb |
| ADediting_461217 | chr14_95265120_- | SINE | Alu | Name=AluJb |
| ADediting_461218 | chr14_95265197_- | SINE | Alu | Name=AluJb |
| ADediting_461219 | chr14_95268906_- | SINE | Alu | Name=AluSx4 |
| ADediting_461220 | chr14_95268942_- | SINE | Alu | Name=AluSx4 |
| ADediting_461221 | chr14_95268952_- | SINE | Alu | Name=AluSx4 |
| ADediting_461222 | chr14_95269023_- | SINE | Alu | Name=AluSx4 |
| ADediting_461223 | chr14_95271263_- | LINE | L1 | Name=L1MB8 |
| ADediting_461224 | chr14_95274736_- | SINE | Alu | Name=AluSc |
| ADediting_461225 | chr14_95274737_- | SINE | Alu | Name=AluSc |
| ADediting_461226 | chr14_95274786_- | SINE | Alu | Name=AluSc |
| ADediting_461227 | chr14_95274787_- | SINE | Alu | Name=AluSc |
| ADediting_461228 | chr14_95274857_- | SINE | Alu | Name=AluSc |
| ADediting_461229 | chr14_95274863_- | SINE | Alu | Name=AluSc |
| ADediting_461230 | chr14_95274867_- | SINE | Alu | Name=AluSc |
| ADediting_461231 | chr14_95274896_- | SINE | Alu | Name=AluSc |
| ADediting_461232 | chr14_95274897_- | SINE | Alu | Name=AluSc |
| ADediting_461233 | chr14_95275725_- | SINE | Alu | Name=AluSq2 |
| ADediting_461234 | chr14_95275787_- | SINE | Alu | Name=AluSq2 |
| ADediting_461235 | chr14_95275791_- | SINE | Alu | Name=AluSq2 |
| ADediting_461236 | chr14_95275795_- | SINE | Alu | Name=AluSq2 |
| ADediting_461237 | chr14_95275800_- | SINE | Alu | Name=AluSq2 |
| ADediting_461238 | chr14_95275801_- | SINE | Alu | Name=AluSq2 |
| ADediting_461239 | chr14_95275871_- | SINE | Alu | Name=AluSq2 |
| ADediting_461240 | chr14_95275890_- | SINE | Alu | Name=AluSq2 |
| ADediting_461241 | chr14_95275927_- | SINE | Alu | Name=AluSq2 |
| ADediting_461242 | chr14_95275935_- | SINE | Alu | Name=AluSq2 |
| ADediting_461243 | chr14_95275936_- | SINE | Alu | Name=AluSq2 |
| ADediting_461244 | chr14_95275958_- | SINE | Alu | Name=AluSq2 |
| ADediting_461245 | chr14_95277695_- | SINE | Alu | Name=AluSx1 |
| ADediting_461246 | chr14_95277766_- | SINE | Alu | Name=AluSx1 |
| ADediting_461247 | chr14_95277792_- | SINE | Alu | Name=AluSx1 |
| ADediting_461248 | chr14_95277815_- | SINE | Alu | Name=AluSx1 |
| ADediting_461249 | chr14_95277831_- | SINE | Alu | Name=AluSx1 |
| ADediting_461250 | chr14_95277834_- | SINE | Alu | Name=AluSx1 |
| ADediting_461251 | chr14_95277858_- | SINE | Alu | Name=AluSx1 |
| ADediting_461252 | chr14_95277873_- | SINE | Alu | Name=AluSx1 |
| ADediting_461253 | chr14_95277893_- | SINE | Alu | Name=AluSx1 |
| ADediting_461254 | chr14_95277899_- | SINE | Alu | Name=AluSx1 |
| ADediting_461255 | chr14_95277900_- | SINE | Alu | Name=AluSx1 |
| ADediting_461256 | chr14_95279539_- | SINE | Alu | Name=AluY |
| ADediting_461257 | chr14_95279590_- | SINE | Alu | Name=AluY |
| ADediting_461258 | chr14_95279594_- | SINE | Alu | Name=AluY |
| ADediting_461259 | chr14_95279602_- | SINE | Alu | Name=AluY |
| ADediting_461260 | chr14_95279610_- | SINE | Alu | Name=AluY |
| ADediting_461261 | chr14_95279616_- | SINE | Alu | Name=AluY |
| ADediting_461262 | chr14_95279635_- | SINE | Alu | Name=AluY |
| ADediting_461263 | chr14_95279661_- | SINE | Alu | Name=AluY |
| ADediting_461264 | chr14_95279671_- | SINE | Alu | Name=AluY |
| ADediting_1538463 | chr14_95186601_- | SINE | Alu | Name=AluJr4 |
| ADediting_1538464 | chr14_95264308_- | SINE | Alu | Name=AluJb |
| ADediting_1620912 | chr14_95261122_- | DNA | TcMar-Tigger | Name=Tigger17a |
| ADediting_1620913 | chr14_95261525_- | DNA | TcMar-Tigger | Name=Tigger17c |
| ADediting_1620914 | chr14_95262705_- | SINE | Alu | Name=AluJo |
| ADediting_1620915 | chr14_95264168_- | SINE | Alu | Name=AluJb |
| ADediting_1620916 | chr14_95264204_- | SINE | Alu | Name=AluJb |
| ADediting_1620917 | chr14_95264228_- | SINE | Alu | Name=AluJb |
| ADediting_1620918 | chr14_95270661_- | LINE | L1 | Name=L1MB8 |
| ADediting_1620919 | chr14_95274799_- | SINE | Alu | Name=AluSc |
| ADediting_1620920 | chr14_95274807_- | SINE | Alu | Name=AluSc |
| ADediting_1620921 | chr14_95274835_- | SINE | Alu | Name=AluSc |
| ADediting_1620922 | chr14_95275823_- | SINE | Alu | Name=AluSq2 |
| ADediting_1620923 | chr14_95275827_- | SINE | Alu | Name=AluSq2 |
| ADediting_1620924 | chr14_95275831_- | SINE | Alu | Name=AluSq2 |
| ADediting_1620925 | chr14_95275836_- | SINE | Alu | Name=AluSq2 |
| ADediting_1620926 | chr14_95275845_- | SINE | Alu | Name=AluSq2 |
| ADediting_1620927 | chr14_95275851_- | SINE | Alu | Name=AluSq2 |
| ADediting_1620928 | chr14_95275859_- | SINE | Alu | Name=AluSq2 |
| ADediting_1620929 | chr14_95289328_- | SINE | Alu | Name=AluSx3 |
Top |
RNA A-to-I editing events in the alternative splicing sites for CLMN |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| ES | ADediting_461192 | chr14_95193319_- | 95193313:95193321 | 5ss | 1e | AAAGTATTT | 0.86 | AAGGTATTT | 7.64 |
| RI | ADediting_461192 | chr14_95193319_- | 95193313:95193321 | 5ss | 1e | AAAGTATTT | 0.86 | AAGGTATTT | 7.64 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for CLMN |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for CLMN |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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Top |
The effects of the RNA editing to the miRNA binding sites for CLMN |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_461138 | chr14_95184842_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6847-3p | chr14 | 95184841 | 95184847 | 7mer-m8 | 95184840 | 95184862 | 153 | -20.81 |
| ADediting_461141 | chr14_95184863_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-383-3p | chr14 | 95184858 | 95184864 | 7mer-m8 | 95184857 | 95184873 | 144 | -17.06 |
| ADediting_461141 | chr14_95184863_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-9-5p | chr14 | 95184863 | 95184869 | 7mer-m8 | 95184862 | 95184884 | 143 | -13.27 |
| ADediting_461144 | chr14_95184891_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3622a-3p | chr14 | 95184887 | 95184894 | 8mer-1a | 95184887 | 95184908 | 140 | -15.99 |
| ADediting_461144 | chr14_95184891_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3622b-3p | chr14 | 95184887 | 95184894 | 8mer-1a | 95184887 | 95184907 | 149 | -20.31 |
| ADediting_461144 | chr14_95184891_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4649-3p | chr14 | 95184891 | 95184897 | 7mer-m8 | 95184890 | 95184910 | 147 | -18.42 |
| ADediting_461144 | chr14_95184891_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-544b | chr14 | 95184890 | 95184896 | 7mer-m8 | 95184889 | 95184909 | 153 | -18.39 |
| ADediting_461146 | chr14_95184904_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-28-5p | chr14 | 95184899 | 95184905 | 7mer-m8 | 95184898 | 95184918 | 151 | -22.03 |
| ADediting_461146 | chr14_95184904_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3139 | chr14 | 95184899 | 95184905 | 7mer-m8 | 95184898 | 95184920 | 165 | -26.99 |
| ADediting_461146 | chr14_95184904_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-708-5p | chr14 | 95184899 | 95184905 | 7mer-m8 | 95184898 | 95184919 | 150 | -20.51 |
| ADediting_461148 | chr14_95184942_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-1283 | chr14 | 95184938 | 95184945 | 8mer-1a | 95184938 | 95184960 | 155 | -14.08 |
| ADediting_461149 | chr14_95184994_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3614-5p | chr14 | 95184994 | 95185000 | 7mer-m8 | 95184993 | 95185016 | 152 | -25.27 |
| ADediting_461149 | chr14_95184994_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4691-3p | chr14 | 95184990 | 95184996 | 7mer-m8 | 95184989 | 95185016 | 150 | -26.36 |
| ADediting_461151 | chr14_95184998_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6771-5p | chr14 | 95184997 | 95185003 | 7mer-m8 | 95184996 | 95185015 | 160 | -34.33 |
| ADediting_461152 | chr14_95185006_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6089 | chr14 | 95185001 | 95185007 | 7mer-m8 | 95185000 | 95185023 | 167 | -39.13 |
| ADediting_461153 | chr14_95185019_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-1288-3p | chr14 | 95185016 | 95185022 | 7mer-m8 | 95185015 | 95185036 | 156 | -29.04 |
| ADediting_461153 | chr14_95185019_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3169 | chr14 | 95185015 | 95185021 | 7mer-m8 | 95185014 | 95185034 | 157 | -19.51 |
| ADediting_461153 | chr14_95185019_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-5002-3p | chr14 | 95185017 | 95185023 | 7mer-m8 | 95185016 | 95185034 | 151 | -16.18 |
| ADediting_461154 | chr14_95185024_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-615-3p | chr14 | 95185023 | 95185029 | 7mer-m8 | 95185022 | 95185043 | 152 | -24.79 |
| ADediting_461158 | chr14_95185070_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4793-3p | chr14 | 95185067 | 95185073 | 7mer-m8 | 95185066 | 95185088 | 149 | -22.66 |
| ADediting_461158 | chr14_95185070_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-7703 | chr14 | 95185068 | 95185074 | 7mer-m8 | 95185067 | 95185089 | 163 | -26.74 |
| ADediting_461159 | chr14_95185097_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-208a-3p | chr14 | 95185092 | 95185098 | 7mer-m8 | 95185091 | 95185112 | 140 | -10.6 |
| ADediting_461159 | chr14_95185097_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-208b-3p | chr14 | 95185092 | 95185098 | 7mer-m8 | 95185091 | 95185112 | 140 | -10.23 |
| ADediting_461160 | chr14_95185100_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-340-3p | chr14 | 95185099 | 95185105 | 7mer-m8 | 95185098 | 95185117 | 142 | -14.11 |
| ADediting_461160 | chr14_95185100_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6827-3p | chr14 | 95185099 | 95185105 | 7mer-m8 | 95185098 | 95185118 | 150 | -16.89 |
| ADediting_461162 | chr14_95185489_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4659a-5p | chr14 | 95185486 | 95185492 | 7mer-m8 | 95185485 | 95185506 | 145 | -15.65 |
| ADediting_461162 | chr14_95185489_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4659b-5p | chr14 | 95185486 | 95185492 | 7mer-m8 | 95185485 | 95185503 | 145 | -13.31 |
| ADediting_461162 | chr14_95185489_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4722-3p | chr14 | 95185484 | 95185490 | 7mer-m8 | 95185483 | 95185504 | 140 | -14.95 |
| ADediting_461162 | chr14_95185489_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4769-3p | chr14 | 95185485 | 95185491 | 7mer-m8 | 95185484 | 95185505 | 140 | -12.3 |
| ADediting_461162 | chr14_95185489_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6727-3p | chr14 | 95185484 | 95185490 | 7mer-m8 | 95185483 | 95185502 | 140 | -13.48 |
| ADediting_461162 | chr14_95185489_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6817-5p | chr14 | 95185485 | 95185491 | 7mer-m8 | 95185484 | 95185510 | 143 | -20.25 |
| ADediting_461163 | chr14_95186607_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4726-3p | chr14 | 95186606 | 95186612 | 7mer-m8 | 95186605 | 95186626 | 140 | -16.04 |
| ADediting_461163 | chr14_95186607_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-500b-3p | chr14 | 95186603 | 95186610 | 8mer-1a | 95186603 | 95186620 | 146 | -19.6 |
| ADediting_461163 | chr14_95186607_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6879-3p | chr14 | 95186601 | 95186608 | 8mer-1a | 95186601 | 95186621 | 141 | -16.41 |
| ADediting_461164 | chr14_95186617_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-1468-3p | chr14 | 95186616 | 95186622 | 7mer-m8 | 95186615 | 95186635 | 151 | -14.63 |
| ADediting_461164 | chr14_95186617_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-548p | chr14 | 95186615 | 95186621 | 7mer-m8 | 95186614 | 95186634 | 145 | -11.26 |
| ADediting_461166 | chr14_95186643_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3120-3p | chr14 | 95186639 | 95186645 | 7mer-m8 | 95186638 | 95186658 | 147 | -14.77 |
| ADediting_461167 | chr14_95186648_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-186-3p | chr14 | 95186647 | 95186653 | 7mer-m8 | 95186646 | 95186667 | 140 | -18.01 |
| ADediting_461170 | chr14_95186693_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-1207-3p | chr14 | 95186693 | 95186699 | 7mer-m8 | 95186692 | 95186708 | 145 | -12.96 |
| ADediting_461170 | chr14_95186693_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-646 | chr14 | 95186691 | 95186697 | 7mer-m8 | 95186690 | 95186710 | 152 | -17.66 |
| ADediting_461172 | chr14_95186703_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3619-3p | chr14 | 95186699 | 95186705 | 7mer-m8 | 95186698 | 95186720 | 147 | -19.98 |
| ADediting_461173 | chr14_95186705_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6513-3p | chr14 | 95186705 | 95186711 | 7mer-m8 | 95186704 | 95186724 | 152 | -15.91 |
| ADediting_461174 | chr14_95186711_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-519a-3p | chr14 | 95186705 | 95186712 | 8mer-1a | 95186705 | 95186726 | 152 | -13.94 |
| ADediting_461174 | chr14_95186711_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-519b-3p | chr14 | 95186705 | 95186712 | 8mer-1a | 95186705 | 95186726 | 152 | -13.94 |
| ADediting_461174 | chr14_95186711_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-519c-3p | chr14 | 95186705 | 95186712 | 8mer-1a | 95186705 | 95186726 | 148 | -11.33 |
| ADediting_461175 | chr14_95186779_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3140-5p | chr14 | 95186777 | 95186784 | 8mer-1a | 95186777 | 95186797 | 147 | -15.8 |
| ADediting_461175 | chr14_95186779_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4680-3p | chr14 | 95186779 | 95186785 | 7mer-m8 | 95186778 | 95186798 | 140 | -10.63 |
| ADediting_461177 | chr14_95186784_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4680-5p | chr14 | 95186780 | 95186786 | 7mer-1a | 95186780 | 95186800 | 144 | -21.51 |
| ADediting_461179 | chr14_95186793_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-5699-5p | chr14 | 95186790 | 95186796 | 7mer-m8 | 95186789 | 95186810 | 140 | -12.74 |
| ADediting_461179 | chr14_95186793_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-874-5p | chr14 | 95186788 | 95186795 | 8mer-1a | 95186788 | 95186810 | 147 | -18.62 |
| ADediting_461181 | chr14_95186811_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-18a-3p | chr14 | 95186806 | 95186812 | 7mer-m8 | 95186805 | 95186825 | 147 | -22.46 |
| ADediting_461181 | chr14_95186811_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3176 | chr14 | 95186811 | 95186817 | 7mer-m8 | 95186810 | 95186828 | 140 | -16.93 |
| ADediting_461181 | chr14_95186811_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3922-3p | chr14 | 95186811 | 95186817 | 7mer-m8 | 95186810 | 95186831 | 141 | -19.73 |
| ADediting_461181 | chr14_95186811_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-874-3p | chr14 | 95186807 | 95186813 | 7mer-m8 | 95186806 | 95186830 | 162 | -34.51 |
| ADediting_461184 | chr14_95186833_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-625-3p | chr14 | 95186832 | 95186838 | 7mer-m8 | 95186831 | 95186852 | 144 | -12.75 |
| ADediting_461185 | chr14_95186834_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-638 | chr14 | 95186828 | 95186834 | 7mer-1a | 95186828 | 95186852 | 141 | -24.95 |
| ADediting_461186 | chr14_95186836_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-10399-5p | chr14 | 95186832 | 95186838 | 7mer-m8 | 95186831 | 95186852 | 148 | -10 |
| ADediting_461186 | chr14_95186836_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3934-5p | chr14 | 95186836 | 95186842 | 7mer-m8 | 95186835 | 95186857 | 151 | -23.91 |
| ADediting_461186 | chr14_95186836_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-552-3p | chr14 | 95186834 | 95186841 | 8mer-1a | 95186834 | 95186854 | 140 | -14.62 |
| ADediting_461186 | chr14_95186836_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6504-3p | chr14 | 95186832 | 95186838 | 7mer-m8 | 95186831 | 95186852 | 149 | -15.24 |
| ADediting_461191 | chr14_95186878_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-513c-5p | chr14 | 95186874 | 95186881 | 8mer-1a | 95186874 | 95186896 | 150 | -16.52 |
| ADediting_461191 | chr14_95186878_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-514b-5p | chr14 | 95186874 | 95186881 | 8mer-1a | 95186874 | 95186893 | 155 | -19.44 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1538463 | chr14_95186601_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6773-3p | chr14 | 95186599 | 95186606 | 8mer-1a | 95186599 | 95186620 | 147 | -13.62 |
| ADediting_461138 | chr14_95184842_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-1206 | chr14 | 95184841 | 95184847 | 7mer-m8 | 95184840 | 95184860 | 149 | -11.69 |
| ADediting_461138 | chr14_95184842_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-203a-5p | chr14 | 95184838 | 95184844 | 7mer-m8 | 95184837 | 95184865 | 145 | -17.04 |
| ADediting_461139 | chr14_95184846_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-1206 | chr14 | 95184841 | 95184847 | 7mer-m8 | 95184840 | 95184860 | 149 | -11.69 |
| ADediting_461141 | chr14_95184863_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4310 | chr14 | 95184858 | 95184864 | 7mer-m8 | 95184857 | 95184872 | 141 | -8.38 |
| ADediting_461141 | chr14_95184863_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-7157-5p | chr14 | 95184858 | 95184864 | 7mer-m8 | 95184857 | 95184879 | 152 | -19.49 |
| ADediting_461147 | chr14_95184917_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4293 | chr14 | 95184913 | 95184919 | 7mer-m8 | 95184912 | 95184929 | 144 | -22.7 |
| ADediting_461149 | chr14_95184994_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-5690 | chr14 | 95184990 | 95184996 | 7mer-m8 | 95184989 | 95185009 | 145 | -16.74 |
| ADediting_461150 | chr14_95184997_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-12126 | chr14 | 95184994 | 95185001 | 8mer-1a | 95184994 | 95185017 | 147 | -13.08 |
| ADediting_461150 | chr14_95184997_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-887-5p | chr14 | 95184997 | 95185003 | 7mer-m8 | 95184996 | 95185015 | 143 | -19.73 |
| ADediting_461151 | chr14_95184998_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-12126 | chr14 | 95184994 | 95185001 | 8mer-1a | 95184994 | 95185017 | 147 | -13.08 |
| ADediting_461151 | chr14_95184998_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-30b-3p | chr14 | 95184997 | 95185004 | 8mer-1a | 95184997 | 95185018 | 151 | -15.38 |
| ADediting_461151 | chr14_95184998_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3689a-3p | chr14 | 95184997 | 95185004 | 8mer-1a | 95184997 | 95185017 | 147 | -18.72 |
| ADediting_461151 | chr14_95184998_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3689b-3p | chr14 | 95184997 | 95185004 | 8mer-1a | 95184997 | 95185017 | 147 | -17.55 |
| ADediting_461151 | chr14_95184998_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3689c | chr14 | 95184997 | 95185004 | 8mer-1a | 95184997 | 95185017 | 147 | -17.55 |
| ADediting_461151 | chr14_95184998_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6779-5p | chr14 | 95184997 | 95185004 | 8mer-1a | 95184997 | 95185015 | 148 | -22.58 |
| ADediting_461151 | chr14_95184998_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-887-5p | chr14 | 95184997 | 95185003 | 7mer-m8 | 95184996 | 95185015 | 143 | -19.73 |
| ADediting_461152 | chr14_95185006_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3929 | chr14 | 95185002 | 95185008 | 7mer-m8 | 95185001 | 95185022 | 151 | -18.23 |
| ADediting_461152 | chr14_95185006_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4478 | chr14 | 95185002 | 95185008 | 7mer-m8 | 95185001 | 95185019 | 150 | -25.92 |
| ADediting_461152 | chr14_95185006_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4649-3p | chr14 | 95185005 | 95185011 | 7mer-m8 | 95185004 | 95185024 | 140 | -16.11 |
| ADediting_461152 | chr14_95185006_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-485-5p | chr14 | 95185001 | 95185007 | 7mer-m8 | 95185000 | 95185022 | 155 | -16.98 |
| ADediting_461152 | chr14_95185006_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-7160-5p | chr14 | 95185004 | 95185010 | 7mer-m8 | 95185003 | 95185023 | 147 | -22.03 |
| ADediting_461154 | chr14_95185024_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6751-3p | chr14 | 95185023 | 95185029 | 7mer-m8 | 95185022 | 95185042 | 141 | -15.05 |
| ADediting_461156 | chr14_95185044_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-17-3p | chr14 | 95185043 | 95185049 | 7mer-m8 | 95185042 | 95185063 | 150 | -16.77 |
| ADediting_461157 | chr14_95185054_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4679 | chr14 | 95185053 | 95185059 | 7mer-m8 | 95185052 | 95185073 | 144 | -13.75 |
| ADediting_461160 | chr14_95185100_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-626 | chr14 | 95185097 | 95185104 | 8mer-1a | 95185097 | 95185117 | 144 | -10.32 |
| ADediting_461160 | chr14_95185100_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6818-3p | chr14 | 95185100 | 95185106 | 7mer-m8 | 95185099 | 95185120 | 146 | -13.18 |
| ADediting_461160 | chr14_95185100_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6876-3p | chr14 | 95185097 | 95185104 | 8mer-1a | 95185097 | 95185120 | 142 | -10.84 |
| ADediting_461161 | chr14_95185104_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6818-3p | chr14 | 95185100 | 95185106 | 7mer-m8 | 95185099 | 95185120 | 146 | -13.18 |
| ADediting_461163 | chr14_95186607_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-668-3p | chr14 | 95186601 | 95186608 | 8mer-1a | 95186601 | 95186623 | 151 | -19.19 |
| ADediting_461165 | chr14_95186633_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-7705 | chr14 | 95186632 | 95186638 | 7mer-m8 | 95186631 | 95186651 | 154 | -14.58 |
| ADediting_461166 | chr14_95186643_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-216a-3p | chr14 | 95186637 | 95186643 | 7mer-1a | 95186637 | 95186658 | 145 | -23.27 |
| ADediting_461168 | chr14_95186676_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-1976 | chr14 | 95186671 | 95186678 | 8mer-1a | 95186671 | 95186691 | 154 | -27.14 |
| ADediting_461168 | chr14_95186676_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6727-3p | chr14 | 95186673 | 95186679 | 7mer-1a | 95186673 | 95186692 | 140 | -26.35 |
| ADediting_461168 | chr14_95186676_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6747-3p | chr14 | 95186673 | 95186680 | 8mer-1a | 95186673 | 95186695 | 153 | -24.55 |
| ADediting_461169 | chr14_95186689_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-1200 | chr14 | 95186686 | 95186692 | 7mer-m8 | 95186685 | 95186706 | 141 | -18.61 |
| ADediting_461169 | chr14_95186689_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6869-5p | chr14 | 95186689 | 95186695 | 7mer-m8 | 95186688 | 95186710 | 149 | -14.55 |
| ADediting_461170 | chr14_95186693_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6869-5p | chr14 | 95186689 | 95186695 | 7mer-m8 | 95186688 | 95186710 | 149 | -14.55 |
| ADediting_461172 | chr14_95186703_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-8052 | chr14 | 95186697 | 95186703 | 7mer-1a | 95186697 | 95186717 | 149 | -19.15 |
| ADediting_461178 | chr14_95186788_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3176 | chr14 | 95186787 | 95186793 | 7mer-m8 | 95186786 | 95186804 | 145 | -17.1 |
| ADediting_461178 | chr14_95186788_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-3922-3p | chr14 | 95186787 | 95186793 | 7mer-m8 | 95186786 | 95186806 | 154 | -21.46 |
| ADediting_461178 | chr14_95186788_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6878-3p | chr14 | 95186788 | 95186794 | 7mer-m8 | 95186787 | 95186809 | 150 | -27.54 |
| ADediting_461179 | chr14_95186793_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6878-3p | chr14 | 95186788 | 95186794 | 7mer-m8 | 95186787 | 95186809 | 150 | -27.54 |
| ADediting_461180 | chr14_95186807_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-1976 | chr14 | 95186803 | 95186809 | 7mer-m8 | 95186802 | 95186823 | 152 | -25.54 |
| ADediting_461180 | chr14_95186807_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-660-3p | chr14 | 95186801 | 95186808 | 8mer-1a | 95186801 | 95186821 | 143 | -18.16 |
| ADediting_461180 | chr14_95186807_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6747-3p | chr14 | 95186804 | 95186811 | 8mer-1a | 95186804 | 95186825 | 154 | -24.54 |
| ADediting_461181 | chr14_95186811_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-212-5p | chr14 | 95186809 | 95186815 | 7mer-m8 | 95186808 | 95186832 | 154 | -20.38 |
| ADediting_461182 | chr14_95186812_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-212-5p | chr14 | 95186809 | 95186815 | 7mer-m8 | 95186808 | 95186832 | 154 | -20.38 |
| ADediting_461182 | chr14_95186812_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6878-3p | chr14 | 95186811 | 95186818 | 8mer-1a | 95186811 | 95186831 | 142 | -14.14 |
| ADediting_461183 | chr14_95186817_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-150-5p | chr14 | 95186816 | 95186822 | 7mer-m8 | 95186815 | 95186836 | 140 | -13.4 |
| ADediting_461183 | chr14_95186817_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6778-3p | chr14 | 95186814 | 95186820 | 7mer-m8 | 95186813 | 95186833 | 143 | -13.66 |
| ADediting_461183 | chr14_95186817_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6878-3p | chr14 | 95186811 | 95186818 | 8mer-1a | 95186811 | 95186831 | 142 | -14.14 |
| ADediting_461184 | chr14_95186833_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-5089-5p | chr14 | 95186828 | 95186834 | 7mer-m8 | 95186827 | 95186849 | 148 | -13.1 |
| ADediting_461188 | chr14_95186850_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4693-5p | chr14 | 95186850 | 95186856 | 7mer-m8 | 95186849 | 95186872 | 142 | -12.62 |
| ADediting_461189 | chr14_95186855_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4693-5p | chr14 | 95186850 | 95186856 | 7mer-m8 | 95186849 | 95186872 | 142 | -12.62 |
| ADediting_461189 | chr14_95186855_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-550b-2-5p | chr14 | 95186853 | 95186859 | 7mer-m8 | 95186852 | 95186872 | 150 | -15.41 |
| ADediting_461189 | chr14_95186855_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6529-3p | chr14 | 95186852 | 95186858 | 7mer-m8 | 95186851 | 95186873 | 155 | -16.63 |
| ADediting_461189 | chr14_95186855_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-6889-3p | chr14 | 95186852 | 95186858 | 7mer-m8 | 95186851 | 95186872 | 142 | -17.44 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-589-3p | chr14 | 95187165 | 95187172 | 8mer-1a | 95187165 | 95187185 | 153 | -26.42 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-589-3p | chr14 | 95187609 | 95187616 | 8mer-1a | 95187609 | 95187631 | 153 | -22.78 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-589-5p | chr14 | 95184689 | 95184695 | 7mer-m8 | 95184688 | 95184707 | 164 | -29.25 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4477b | chr14 | 95184039 | 95184045 | 7mer-m8 | 95184038 | 95184058 | 146 | -9.89 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-337-3p | chr14 | 95182742 | 95182748 | 7mer-m8 | 95182741 | 95182765 | 147 | -13.11 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-337-3p | chr14 | 95184794 | 95184800 | 7mer-m8 | 95184793 | 95184814 | 152 | -12.57 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-381-3p | chr14 | 95183002 | 95183008 | 7mer-1a | 95183002 | 95183023 | 148 | -18.46 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-381-3p | chr14 | 95183459 | 95183465 | 7mer-m8 | 95183458 | 95183479 | 149 | -11.96 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-381-3p | chr14 | 95185157 | 95185163 | 7mer-m8 | 95185156 | 95185177 | 147 | -13.4 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-641 | chr14 | 95187510 | 95187517 | 8mer-1a | 95187510 | 95187532 | 156 | -15.92 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-641 | chr14 | 95189043 | 95189049 | 7mer-m8 | 95189042 | 95189065 | 149 | -16.31 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-641 | chr14 | 95190228 | 95190234 | 7mer-m8 | 95190227 | 95190250 | 147 | -17.01 |
| ADediting_286380 | chr11_79422188_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-5579-3p | chr14 | 95182626 | 95182633 | 8mer-1a | 95182626 | 95182647 | 160 | -20.92 |
| ADediting_286380 | chr11_79422188_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-5579-3p | chr14 | 95183929 | 95183935 | 7mer-m8 | 95183928 | 95183949 | 146 | -12.43 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4775 | chr14 | 95181985 | 95181991 | 7mer-m8 | 95181984 | 95182006 | 147 | -9.42 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4775 | chr14 | 95183340 | 95183347 | 8mer-1a | 95183340 | 95183360 | 154 | -12.08 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4775 | chr14 | 95190410 | 95190416 | 7mer-m8 | 95190409 | 95190430 | 143 | -7.36 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-5585-3p | chr14 | 95182669 | 95182675 | 7mer-m8 | 95182668 | 95182689 | 140 | -14.95 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-5581-3p | chr14 | 95185199 | 95185205 | 7mer-m8 | 95185198 | 95185219 | 140 | -11.31 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-589-3p | chr14 | 95184583 | 95184590 | 8mer-1a | 95184583 | 95184606 | 150 | -13.8 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-589-3p | chr14 | 95184644 | 95184650 | 7mer-m8 | 95184643 | 95184663 | 142 | -16.4 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-589-3p | chr14 | 95185476 | 95185482 | 7mer-m8 | 95185475 | 95185499 | 148 | -15.82 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-589-3p | chr14 | 95188691 | 95188698 | 8mer-1a | 95188691 | 95188714 | 140 | -13.72 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4477b | chr14 | 95182826 | 95182833 | 8mer-1a | 95182826 | 95182847 | 147 | -8.2 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-4477b | chr14 | 95182826 | 95182833 | 8mer-1a | 95182826 | 95182847 | 147 | -8.2 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-381-3p | chr14 | 95183386 | 95183392 | 7mer-m8 | 95183385 | 95183407 | 145 | -11.86 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-381-3p | chr14 | 95183386 | 95183392 | 7mer-m8 | 95183385 | 95183407 | 145 | -11.86 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-641 | chr14 | 95190674 | 95190680 | 7mer-m8 | 95190673 | 95190695 | 143 | -10 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-641 | chr14 | 95190674 | 95190680 | 7mer-m8 | 95190673 | 95190695 | 143 | -10 |
| ADediting_1643790 | chr3_121049689_+ | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-5682 | chr14 | 95182008 | 95182014 | 7mer-m8 | 95182007 | 95182028 | 154 | -19.05 |
| ADediting_291761 | chr11_93733708_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-1304-3p | chr14 | 95190302 | 95190308 | 7mer-m8 | 95190301 | 95190323 | 149 | -24.06 |
| ADediting_291761 | chr11_93733708_- | ENSG00000165959.12 | ENST00000298912.9 | CLMN-201 | hsa-miR-1304-3p | chr14 | 95190382 | 95190388 | 7mer-m8 | 95190381 | 95190401 | 149 | -21.35 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for CLMN |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000298912.9 | protein_coding |  |  |
| ENST00000556441.1 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_461138 | ENST00000298912.9 | chr14_95184842_- | 9847 | -4210.60 | -4203.90 | -4272.90 |
| ADediting_461139 | ENST00000298912.9 | chr14_95184846_- | 9843 | -4208.10 | -4203.90 | -4272.90 |
| ADediting_461140 | ENST00000298912.9 | chr14_95184850_- | 9839 | -4203.60 | -4203.90 | -4272.90 |
| ADediting_461141 | ENST00000298912.9 | chr14_95184863_- | 9826 | -4207.30 | -4203.90 | -4272.90 |
| ADediting_461142 | ENST00000298912.9 | chr14_95184864_- | 9825 | -4203.10 | -4203.90 | -4272.90 |
| ADediting_461143 | ENST00000298912.9 | chr14_95184865_- | 9824 | -4204.00 | -4203.90 | -4272.90 |
| ADediting_461144 | ENST00000298912.9 | chr14_95184891_- | 9798 | -4203.60 | -4203.90 | -4272.90 |
| ADediting_461145 | ENST00000298912.9 | chr14_95184892_- | 9797 | -4203.60 | -4203.90 | -4272.90 |
| ADediting_461146 | ENST00000298912.9 | chr14_95184904_- | 9785 | -4203.60 | -4203.90 | -4272.90 |
| ADediting_461147 | ENST00000298912.9 | chr14_95184917_- | 9772 | -4203.20 | -4203.90 | -4272.90 |
| ADediting_461148 | ENST00000298912.9 | chr14_95184942_- | 9747 | -4208.10 | -4203.90 | -4272.90 |
| ADediting_461149 | ENST00000298912.9 | chr14_95184994_- | 9695 | -4203.60 | -4203.90 | -4272.90 |
| ADediting_461150 | ENST00000298912.9 | chr14_95184997_- | 9692 | -4203.50 | -4203.90 | -4272.90 |
| ADediting_461151 | ENST00000298912.9 | chr14_95184998_- | 9691 | -4207.30 | -4203.90 | -4272.90 |
| ADediting_461152 | ENST00000298912.9 | chr14_95185006_- | 9683 | -4202.90 | -4203.90 | -4272.90 |
| ADediting_461153 | ENST00000298912.9 | chr14_95185019_- | 9670 | -4203.90 | -4203.90 | -4272.90 |
| ADediting_461154 | ENST00000298912.9 | chr14_95185024_- | 9665 | -4203.10 | -4203.90 | -4272.90 |
| ADediting_461155 | ENST00000298912.9 | chr14_95185038_- | 9651 | -4204.30 | -4203.90 | -4272.90 |
| ADediting_461156 | ENST00000298912.9 | chr14_95185044_- | 9645 | -4203.80 | -4203.90 | -4272.90 |
| ADediting_461157 | ENST00000298912.9 | chr14_95185054_- | 9635 | -4203.90 | -4203.90 | -4272.90 |
| ADediting_461158 | ENST00000298912.9 | chr14_95185070_- | 9619 | -4203.60 | -4203.90 | -4272.90 |
| ADediting_461159 | ENST00000298912.9 | chr14_95185097_- | 9592 | -4209.70 | -4203.90 | -4272.90 |
| ADediting_461160 | ENST00000298912.9 | chr14_95185100_- | 9589 | -4203.20 | -4203.90 | -4272.90 |
| ADediting_461161 | ENST00000298912.9 | chr14_95185104_- | 9585 | -4203.00 | -4203.90 | -4272.90 |
| ADediting_461162 | ENST00000298912.9 | chr14_95185489_- | 9200 | -4210.50 | -4203.90 | -4272.90 |
| ADediting_1538463 | ENST00000298912.9 | chr14_95186601_- | 8088 | -4203.20 | -4203.90 | -4272.90 |
| ADediting_461163 | ENST00000298912.9 | chr14_95186607_- | 8082 | -4209.00 | -4203.90 | -4272.90 |
| ADediting_461164 | ENST00000298912.9 | chr14_95186617_- | 8072 | -4203.90 | -4203.90 | -4272.90 |
| ADediting_461165 | ENST00000298912.9 | chr14_95186633_- | 8056 | -4210.10 | -4203.90 | -4272.90 |
| ADediting_461166 | ENST00000298912.9 | chr14_95186643_- | 8046 | -4210.60 | -4203.90 | -4272.90 |
| ADediting_461167 | ENST00000298912.9 | chr14_95186648_- | 8041 | -4203.90 | -4203.90 | -4272.90 |
| ADediting_461168 | ENST00000298912.9 | chr14_95186676_- | 8013 | -4203.20 | -4203.90 | -4272.90 |
| ADediting_461169 | ENST00000298912.9 | chr14_95186689_- | 8000 | -4207.50 | -4203.90 | -4272.90 |
| ADediting_461170 | ENST00000298912.9 | chr14_95186693_- | 7996 | -4203.90 | -4203.90 | -4272.90 |
| ADediting_461171 | ENST00000298912.9 | chr14_95186697_- | 7992 | -4203.20 | -4203.90 | -4272.90 |
| ADediting_461172 | ENST00000298912.9 | chr14_95186703_- | 7986 | -4203.60 | -4203.90 | -4272.90 |
| ADediting_461173 | ENST00000298912.9 | chr14_95186705_- | 7984 | -4210.10 | -4203.90 | -4272.90 |
| ADediting_461174 | ENST00000298912.9 | chr14_95186711_- | 7978 | -4210.60 | -4203.90 | -4272.90 |
| ADediting_461175 | ENST00000298912.9 | chr14_95186779_- | 7910 | -4203.80 | -4203.90 | -4272.90 |
| ADediting_461176 | ENST00000298912.9 | chr14_95186780_- | 7909 | -4209.90 | -4203.90 | -4272.90 |
| ADediting_461177 | ENST00000298912.9 | chr14_95186784_- | 7905 | -4210.10 | -4203.90 | -4272.90 |
| ADediting_461178 | ENST00000298912.9 | chr14_95186788_- | 7901 | -4203.20 | -4203.90 | -4272.90 |
| ADediting_461179 | ENST00000298912.9 | chr14_95186793_- | 7896 | -4203.00 | -4203.90 | -4272.90 |
| ADediting_461180 | ENST00000298912.9 | chr14_95186807_- | 7882 | -4203.20 | -4203.90 | -4272.90 |
| ADediting_461181 | ENST00000298912.9 | chr14_95186811_- | 7878 | -4203.60 | -4203.90 | -4272.90 |
| ADediting_461182 | ENST00000298912.9 | chr14_95186812_- | 7877 | -4203.60 | -4203.90 | -4272.90 |
| ADediting_461183 | ENST00000298912.9 | chr14_95186817_- | 7872 | -4203.90 | -4203.90 | -4272.90 |
| ADediting_461184 | ENST00000298912.9 | chr14_95186833_- | 7856 | -4203.90 | -4203.90 | -4272.90 |
| ADediting_461185 | ENST00000298912.9 | chr14_95186834_- | 7855 | -4204.00 | -4203.90 | -4272.90 |
| ADediting_461186 | ENST00000298912.9 | chr14_95186836_- | 7853 | -4203.90 | -4203.90 | -4272.90 |
| ADediting_461187 | ENST00000298912.9 | chr14_95186840_- | 7849 | -4207.70 | -4203.90 | -4272.90 |
| ADediting_461188 | ENST00000298912.9 | chr14_95186850_- | 7839 | -4208.90 | -4203.90 | -4272.90 |
| ADediting_461189 | ENST00000298912.9 | chr14_95186855_- | 7834 | -4203.50 | -4203.90 | -4272.90 |
| ADediting_461190 | ENST00000298912.9 | chr14_95186877_- | 7812 | -4203.60 | -4203.90 | -4272.90 |
| ADediting_461191 | ENST00000298912.9 | chr14_95186878_- | 7811 | -4204.00 | -4203.90 | -4272.90 |
| ADediting_461192 | ENST00000556441.1 | chr14_95193319_- | 254 | -131.50 | -130.80 | -131.50 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for CLMN |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_461144 | chr14_95184891_- | 1.58164695662953e-06 | 0.380320122906071 | 7.99864731998172e-06 | 0.355571466678303 | 0.0637493646952631 | 0.151764184149517 |
| CER | ADediting_461149 | chr14_95184994_- | 1.69410660184549e-07 | 0.411414113386297 | 5.32523969471951e-05 | 0.323715244239997 | 0.173718020853181 | 0.111658828955741 |
| CER | ADediting_461151 | chr14_95184998_- | 1.63966523684126e-07 | 0.411846095653924 | 1.9191513521172e-05 | 0.34129645259861 | 0.00551644341456563 | 0.225554979328267 |
| TCX | ADediting_461151 | chr14_95184998_- | 3.06664763855777e-05 | 0.33335486335428 | 0.0513650811605507 | 0.159402330372275 | 0.180827004304493 | 0.109852612943638 |
| STG | ADediting_461151 | chr14_95184998_- | 0.43294582631204 | -0.0866967263931478 | 0.148347487038857 | -0.159082763254477 | 0.00268212050327292 | 0.323535048714343 |
| CER | ADediting_461159 | chr14_95185097_- | 3.14151482801711e-08 | 0.432944701069088 | 1.79657721742747e-07 | 0.410635892077817 | 0.00419204807008833 | 0.232522422968572 |
| FP | ADediting_461159 | chr14_95185097_- | 0.806944408793352 | -0.0184446822446171 | 0.0240404407042806 | -0.169101961795868 | 3.57578405977929e-05 | 0.30455809599971 |
| PG | ADediting_461159 | chr14_95185097_- | 0.00281673064457895 | -0.217853775338003 | 0.00548606859566067 | -0.20286651965062 | 1.34761717644579e-05 | 0.313167530729352 |
| CER | ADediting_461165 | chr14_95186633_- | 2.24447524179472e-15 | 0.588949164860218 | 1.28783527362156e-10 | 0.494303742214082 | 0.000495260002894645 | 0.281008597553078 |
| IFG | ADediting_461165 | chr14_95186633_- | 0.108093100036096 | 0.329187382345842 | 0.336342634417204 | 0.200588853058304 | 0.0112559856352695 | 0.498215857946359 |
| CER | ADediting_461166 | chr14_95186643_- | 5.96940217462365e-11 | 0.501994927052104 | 1.86059863703543e-08 | 0.439343159288402 | 0.0271883298281343 | 0.180375039918983 |
| CER | ADediting_461169 | chr14_95186689_- | 1.21567360639148e-13 | 0.557804549457661 | 6.79762794089755e-11 | 0.500708652494622 | 0.00118826803222987 | 0.26222831863434 |
| CER | ADediting_461170 | chr14_95186693_- | 4.21220746658751e-11 | 0.505420403561836 | 1.21761987787453e-08 | 0.44442743108879 | 0.000853243760479227 | 0.269493580814166 |
| CER | ADediting_461174 | chr14_95186711_- | 1.09828692414905e-08 | 0.445651780389639 | 2.6812355352948e-07 | 0.405276885654207 | 0.000183826193516687 | 0.30080386373471 |
| CER | ADediting_461176 | chr14_95186780_- | 1.86199218642947e-06 | 0.377918964229611 | 1.16468388164833e-05 | 0.349527293753648 | 0.0528148834243567 | 0.158434228687427 |
| TCX | ADediting_461176 | chr14_95186780_- | 3.05360380710663e-05 | 0.333428075682458 | 0.0224236872313236 | 0.18633844387502 | 0.128366918860275 | 0.124712351303908 |
| CER | ADediting_461177 | chr14_95186784_- | 3.24229596710892e-06 | 0.369611336073766 | 0.000952887485436766 | 0.267093062948817 | 0.110335225007349 | 0.130902493666825 |
| TCX | ADediting_461192 | chr14_95193319_- | 0.344270188523003 | 0.0777545804053619 | 0.37819602542583 | -0.0724632633597282 | 1.64963996374843e-05 | 0.343814892019934 |
| DLPFC | ADediting_461254 | chr14_95277899_- | 0.691309535018872 | 0.0226411196189294 | 0.139566249206232 | -0.084102172825078 | 5.31564694348504e-19 | 0.476789835224382 |
| DLPFC | ADediting_461255 | chr14_95277900_- | 0.860674467532013 | 0.010008803026905 | 0.0640957818322239 | -0.105291742999723 | 1.32741476711873e-18 | 0.471988218767107 |
| DLPFC | ADediting_461258 | chr14_95279594_- | 0.393957157252729 | -0.0485843164050391 | 0.00466255730376893 | -0.160309938004939 | 3.8930784987743e-11 | 0.363842645289116 |
| DLPFC | ADediting_461263 | chr14_95279661_- | 0.320450727119375 | -0.056612262615525 | 0.000698183374365093 | -0.191543481799188 | 3.33358579535815e-12 | 0.381917159135354 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 4.56157072503048e-06 | 0.257005835489852 | 0.000472675577912562 | 0.197387529626788 | 5.82209661007396e-11 | 0.360772529988535 |
| AC | 2.27139579095814e-10 | 0.387269228052403 | 2.17863009714316e-07 | 0.320733397468242 | 9.97405371837112e-26 | 0.598921414193422 |
| PCC | 0.347994753114821 | 0.0682753583389483 | 0.245860844590245 | 0.0843720999916027 | 6.2955104752896e-11 | 0.450336488637787 |
| CER | 5.7904635647911e-15 | 0.581847781107058 | 6.05524339602734e-14 | 0.563483475033985 | 1.46553465636536e-09 | 0.46864012226021 |
| TCX | 0.00103999597170711 | 0.265176202894542 | 0.0075405470527355 | -0.217369561455766 | 2.50581069185378e-27 | 0.740512191108185 |
| FP | 2.65034054057453e-07 | 0.374287458075804 | 0.00870375460886041 | 0.196106354041244 | 3.05025006111972e-28 | 0.706662010462266 |
| IFG | 0.365751964903674 | 0.188927544992178 | 0.77635368594203 | -0.0598268331700148 | 0.000427907720757206 | 0.65073004908895 |
| PG | 1.21981325554518e-18 | 0.587416898947325 | 1.11584393033889e-08 | 0.403599113810718 | 8.80951783487755e-10 | 0.43028220338063 |
| STG | 8.14255724662444e-05 | 0.416446085403605 | 0.342277770754634 | 0.104903559962685 | 3.15134820436159e-11 | 0.646268799045288 |
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Relation with AD stages for CLMN |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_461151 | chr14_95184998_- | 9.57702718642291e-05 | 0.366496467070834 |
| CER | ADediting_461169 | chr14_95186689_- | 4.55386585938497e-05 | 0.381820451990339 |
| CER | ADediting_461174 | chr14_95186711_- | 2.44277903996458e-05 | 0.394097194403081 |
| TCX | ADediting_461144 | chr14_95184891_- | 0.00144870460218485 | 0.305522995305001 |
| TCX | ADediting_461170 | chr14_95186693_- | 0.000141869211760817 | 0.361283344753064 |
| TCX | ADediting_461176 | chr14_95186780_- | 0.000836922467130855 | 0.319670674844954 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 9.86505468644261e-07 | 0.450671345105569 |
| TCX | 4.58720722162384e-08 | 0.500759365271254 |
| PG | 6.01196779776299e-07 | 0.356267966591994 |
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RelatedDrugs for CLMN |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CLMN |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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