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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for OGFOD3 |
 Gene summary |
| Gene information | Gene symbol | OGFOD3 | Gene ID | 79701 |
| Gene name | 2-oxoglutarate and iron dependent oxygenase domain containing 3 | |
| Synonyms | C17orf101 | |
| Cytomap | 17q25.3 | |
| Type of gene | protein-coding | |
| Description | 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3PKHD domain-containing transmembrane protein C17orf101 | |
| Modification date | 20200313 | |
| UniProtAcc | Q6PK18, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for OGFOD3 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_674957(82389517, -), ADediting_674958(82389518, -), ADediting_674959(82389519, -), ADediting_674960(82389520, -), ADediting_674961(82389534, -), ADediting_674962(82389560, -), ADediting_674963(82389575, -), ADediting_674964(82389581, -), ADediting_674965(82389614, -), ADediting_674966(82389618, -), ADediting_674967(82389629, -), ADediting_674968(82389633, -), ADediting_674969(82389652, -), ADediting_674970(82389665, -), ADediting_674971(82389684, -), ADediting_674972(82389747, -), ADediting_674973(82389751, -), ADediting_674974(82389755, -), ADediting_674975(82389756, -), ADediting_674976(82389777, -), ADediting_674977(82389778, -), ADediting_674978(82389830, -), ADediting_674979(82389838, -), ADediting_674980(82389843, -), ADediting_674981(82389852, -), ADediting_674982(82389855, -), ADediting_674983(82389861, -), ADediting_674984(82389886, -), ADediting_674985(82389909, -), ADediting_674986(82389920, -), ADediting_674987(82389921, -), ADediting_674988(82389934, -), ADediting_674989(82389937, -), ADediting_674990(82389952, -), ADediting_674991(82389958, -), ADediting_674992(82389964, -), ADediting_674993(82389974, -), ADediting_674994(82389983, -), ADediting_674995(82389995, -), ADediting_674996(82390007, -), ADediting_674997(82391397, -), ADediting_674998(82391428, -), ADediting_674999(82391435, -), ADediting_675000(82391454, -), ADediting_675001(82391471, -), ADediting_675002(82391514, -), ADediting_675003(82391516, -), ADediting_675004(82391524, -), ADediting_675005(82391567, -), ADediting_675006(82391593, -), ADediting_675007(82393837, -), ADediting_675008(82394037, -), ADediting_675009(82394052, -), ADediting_675010(82394058, -), ADediting_675011(82394075, -), ADediting_675012(82394082, -), ADediting_675013(82394101, -), ADediting_675014(82394115, -), ADediting_675015(82394118, -), ADediting_675016(82394128, -), ADediting_675017(82394154, -), ADediting_675018(82394168, -), ADediting_675019(82394186, -), ADediting_675020(82394193, -), ADediting_675021(82394195, -), ADediting_675022(82394196, -), ADediting_675023(82394219, -), ADediting_675024(82394240, -), ADediting_675025(82394241, -), ADediting_675026(82394263, -), ADediting_675027(82395129, -), ADediting_675028(82395156, -), ADediting_675029(82395170, -), ADediting_675030(82395172, -), ADediting_675031(82395199, -), ADediting_675032(82395205, -), ADediting_675033(82395208, -), ADediting_675034(82395209, -), ADediting_675035(82395227, -), ADediting_675036(82395228, -), ADediting_675037(82395233, -), ADediting_675038(82395234, -), ADediting_675039(82395235, -), ADediting_675040(82395236, -), ADediting_675041(82395251, -), ADediting_675042(82395274, -), ADediting_675043(82395278, -), ADediting_675044(82395303, -), ADediting_675045(82395304, -), ADediting_675046(82395310, -), ADediting_675047(82395326, -), ADediting_675048(82395617, -), ADediting_675049(82395632, -), ADediting_675050(82395640, -), ADediting_675051(82395657, -), ADediting_675052(82395663, -), ADediting_675053(82395673, -), ADediting_675054(82395697, -), ADediting_675055(82395699, -), ADediting_675056(82395709, -), ADediting_675057(82395758, -), ADediting_675058(82398599, -), ADediting_675059(82401323, -), ADediting_675060(82401343, -), ADediting_675061(82401638, -), ADediting_675062(82401641, -), ADediting_675063(82402178, -), ADediting_675064(82402352, -), ADediting_675065(82402375, -), ADediting_675068(82403375, -), ADediting_675069(82403410, -), ADediting_675070(82403411, -), ADediting_675071(82403435, -), ADediting_675072(82403466, -), ADediting_675073(82403469, -), ADediting_675075(82403532, -), ADediting_675076(82403545, -), ADediting_675083(82406775, -), ADediting_675084(82406801, -), ADediting_675085(82406810, -), ADediting_675086(82406996, -), ADediting_675087(82406997, -), ADediting_675088(82407026, -), ADediting_675089(82407156, -), ADediting_675090(82407226, -), ADediting_675093(82408043, -), ADediting_675094(82408104, -), ADediting_675097(82409703, -), ADediting_675098(82409732, -), ADediting_675099(82409773, -), ADediting_675100(82409783, -), ADediting_675101(82409795, -), ADediting_675102(82409812, -), ADediting_675103(82409813, -), ADediting_675105(82411289, -), ADediting_675108(82413653, -), ADediting_675109(82413667, -), ADediting_675110(82413687, -), ADediting_675111(82413749, -), ADediting_675112(82413771, -), ADediting_675113(82413838, -), ADediting_675114(82414199, -), ADediting_675115(82414252, -), ADediting_675116(82414261, -), ADediting_675117(82414278, -), ADediting_675118(82414308, -), ADediting_675119(82414326, -), ADediting_675120(82414337, -), ADediting_675121(82414356, -), ADediting_675122(82414357, -), ADediting_675123(82414362, -), ADediting_675124(82414364, -), ADediting_675125(82414365, -), ADediting_675126(82414384, -), ADediting_675128(82416795, -), ADediting_675129(82416845, -), ADediting_675130(82416888, -), ADediting_675131(82416902, -), ADediting_675132(82416912, -), ADediting_675133(82416948, -), ADediting_675134(82417572, -), ADediting_1550055(82389555, -), ADediting_1550056(82390019, -), ADediting_1550057(82395057, -), ADediting_1550058(82395121, -), ADediting_1550059(82395207, -), ADediting_1550060(82395250, -), ADediting_1550061(82407951, -), ADediting_1550062(82407960, -), ADediting_1550063(82410898, -), ADediting_1550064(82414309, -), |
Top |
RNA editing positional annotations for OGFOD3 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_674957 | chr17_82389517_- | UTR3 |
| ADediting_674958 | chr17_82389518_- | UTR3 |
| ADediting_674959 | chr17_82389519_- | UTR3 |
| ADediting_674960 | chr17_82389520_- | UTR3 |
| ADediting_674961 | chr17_82389534_- | UTR3 |
| ADediting_674962 | chr17_82389560_- | UTR3 |
| ADediting_674963 | chr17_82389575_- | UTR3 |
| ADediting_674964 | chr17_82389581_- | UTR3 |
| ADediting_674965 | chr17_82389614_- | UTR3 |
| ADediting_674966 | chr17_82389618_- | UTR3 |
| ADediting_674967 | chr17_82389629_- | UTR3 |
| ADediting_674968 | chr17_82389633_- | UTR3 |
| ADediting_674969 | chr17_82389652_- | UTR3 |
| ADediting_674970 | chr17_82389665_- | UTR3 |
| ADediting_674971 | chr17_82389684_- | UTR3 |
| ADediting_674972 | chr17_82389747_- | UTR3 |
| ADediting_674973 | chr17_82389751_- | UTR3 |
| ADediting_674974 | chr17_82389755_- | UTR3 |
| ADediting_674975 | chr17_82389756_- | UTR3 |
| ADediting_674976 | chr17_82389777_- | UTR3 |
| ADediting_674977 | chr17_82389778_- | UTR3 |
| ADediting_674978 | chr17_82389830_- | UTR3 |
| ADediting_674979 | chr17_82389838_- | UTR3 |
| ADediting_674980 | chr17_82389843_- | UTR3 |
| ADediting_674981 | chr17_82389852_- | UTR3 |
| ADediting_674982 | chr17_82389855_- | UTR3 |
| ADediting_674983 | chr17_82389861_- | UTR3 |
| ADediting_674984 | chr17_82389886_- | UTR3 |
| ADediting_674985 | chr17_82389909_- | UTR3 |
| ADediting_674986 | chr17_82389920_- | UTR3 |
| ADediting_674987 | chr17_82389921_- | UTR3 |
| ADediting_674988 | chr17_82389934_- | UTR3 |
| ADediting_674989 | chr17_82389937_- | UTR3 |
| ADediting_674990 | chr17_82389952_- | UTR3 |
| ADediting_674991 | chr17_82389958_- | UTR3 |
| ADediting_674992 | chr17_82389964_- | UTR3 |
| ADediting_674993 | chr17_82389974_- | UTR3 |
| ADediting_674994 | chr17_82389983_- | UTR3 |
| ADediting_674995 | chr17_82389995_- | UTR3 |
| ADediting_674996 | chr17_82390007_- | UTR3 |
| ADediting_674997 | chr17_82391397_- | UTR3 |
| ADediting_674998 | chr17_82391428_- | UTR3 |
| ADediting_674999 | chr17_82391435_- | UTR3 |
| ADediting_675000 | chr17_82391454_- | UTR3 |
| ADediting_675001 | chr17_82391471_- | UTR3 |
| ADediting_675002 | chr17_82391514_- | UTR3 |
| ADediting_675003 | chr17_82391516_- | UTR3 |
| ADediting_675004 | chr17_82391524_- | UTR3 |
| ADediting_675005 | chr17_82391567_- | UTR3 |
| ADediting_675006 | chr17_82391593_- | UTR3 |
| ADediting_675007 | chr17_82393837_- | intronic |
| ADediting_675008 | chr17_82394037_- | intronic |
| ADediting_675009 | chr17_82394052_- | intronic |
| ADediting_675010 | chr17_82394058_- | intronic |
| ADediting_675011 | chr17_82394075_- | intronic |
| ADediting_675012 | chr17_82394082_- | intronic |
| ADediting_675013 | chr17_82394101_- | intronic |
| ADediting_675014 | chr17_82394115_- | intronic |
| ADediting_675015 | chr17_82394118_- | intronic |
| ADediting_675016 | chr17_82394128_- | intronic |
| ADediting_675017 | chr17_82394154_- | intronic |
| ADediting_675018 | chr17_82394168_- | intronic |
| ADediting_675019 | chr17_82394186_- | intronic |
| ADediting_675020 | chr17_82394193_- | intronic |
| ADediting_675021 | chr17_82394195_- | intronic |
| ADediting_675022 | chr17_82394196_- | intronic |
| ADediting_675023 | chr17_82394219_- | intronic |
| ADediting_675024 | chr17_82394240_- | intronic |
| ADediting_675025 | chr17_82394241_- | intronic |
| ADediting_675026 | chr17_82394263_- | intronic |
| ADediting_675027 | chr17_82395129_- | intronic |
| ADediting_675028 | chr17_82395156_- | intronic |
| ADediting_675029 | chr17_82395170_- | intronic |
| ADediting_675030 | chr17_82395172_- | intronic |
| ADediting_675031 | chr17_82395199_- | intronic |
| ADediting_675032 | chr17_82395205_- | intronic |
| ADediting_675033 | chr17_82395208_- | intronic |
| ADediting_675034 | chr17_82395209_- | intronic |
| ADediting_675035 | chr17_82395227_- | intronic |
| ADediting_675036 | chr17_82395228_- | intronic |
| ADediting_675037 | chr17_82395233_- | intronic |
| ADediting_675038 | chr17_82395234_- | intronic |
| ADediting_675039 | chr17_82395235_- | intronic |
| ADediting_675040 | chr17_82395236_- | intronic |
| ADediting_675041 | chr17_82395251_- | intronic |
| ADediting_675042 | chr17_82395274_- | intronic |
| ADediting_675043 | chr17_82395278_- | intronic |
| ADediting_675044 | chr17_82395303_- | intronic |
| ADediting_675045 | chr17_82395304_- | intronic |
| ADediting_675046 | chr17_82395310_- | intronic |
| ADediting_675047 | chr17_82395326_- | intronic |
| ADediting_675048 | chr17_82395617_- | intronic |
| ADediting_675049 | chr17_82395632_- | intronic |
| ADediting_675050 | chr17_82395640_- | intronic |
| ADediting_675051 | chr17_82395657_- | intronic |
| ADediting_675052 | chr17_82395663_- | intronic |
| ADediting_675053 | chr17_82395673_- | intronic |
| ADediting_675054 | chr17_82395697_- | intronic |
| ADediting_675055 | chr17_82395699_- | intronic |
| ADediting_675056 | chr17_82395709_- | intronic |
| ADediting_675057 | chr17_82395758_- | intronic |
| ADediting_675058 | chr17_82398599_- | intronic |
| ADediting_675059 | chr17_82401323_- | ncRNA_exonic |
| ADediting_675060 | chr17_82401343_- | ncRNA_exonic |
| ADediting_675061 | chr17_82401638_- | intronic |
| ADediting_675062 | chr17_82401641_- | intronic |
| ADediting_675063 | chr17_82402178_- | intronic |
| ADediting_675064 | chr17_82402352_- | intronic |
| ADediting_675065 | chr17_82402375_- | intronic |
| ADediting_675068 | chr17_82403375_- | intronic |
| ADediting_675069 | chr17_82403410_- | intronic |
| ADediting_675070 | chr17_82403411_- | intronic |
| ADediting_675071 | chr17_82403435_- | intronic |
| ADediting_675072 | chr17_82403466_- | intronic |
| ADediting_675073 | chr17_82403469_- | intronic |
| ADediting_675075 | chr17_82403532_- | intronic |
| ADediting_675076 | chr17_82403545_- | intronic |
| ADediting_675083 | chr17_82406775_- | intronic |
| ADediting_675084 | chr17_82406801_- | intronic |
| ADediting_675085 | chr17_82406810_- | intronic |
| ADediting_675086 | chr17_82406996_- | intronic |
| ADediting_675087 | chr17_82406997_- | intronic |
| ADediting_675088 | chr17_82407026_- | intronic |
| ADediting_675089 | chr17_82407156_- | intronic |
| ADediting_675090 | chr17_82407226_- | intronic |
| ADediting_675093 | chr17_82408043_- | intronic |
| ADediting_675094 | chr17_82408104_- | intronic |
| ADediting_675097 | chr17_82409703_- | intronic |
| ADediting_675098 | chr17_82409732_- | intronic |
| ADediting_675099 | chr17_82409773_- | intronic |
| ADediting_675100 | chr17_82409783_- | intronic |
| ADediting_675101 | chr17_82409795_- | intronic |
| ADediting_675102 | chr17_82409812_- | intronic |
| ADediting_675103 | chr17_82409813_- | intronic |
| ADediting_675105 | chr17_82411289_- | intronic |
| ADediting_675108 | chr17_82413653_- | intronic |
| ADediting_675109 | chr17_82413667_- | intronic |
| ADediting_675110 | chr17_82413687_- | intronic |
| ADediting_675111 | chr17_82413749_- | intronic |
| ADediting_675112 | chr17_82413771_- | intronic |
| ADediting_675113 | chr17_82413838_- | intronic |
| ADediting_675114 | chr17_82414199_- | intronic |
| ADediting_675115 | chr17_82414252_- | intronic |
| ADediting_675116 | chr17_82414261_- | intronic |
| ADediting_675117 | chr17_82414278_- | intronic |
| ADediting_675118 | chr17_82414308_- | intronic |
| ADediting_675119 | chr17_82414326_- | intronic |
| ADediting_675120 | chr17_82414337_- | intronic |
| ADediting_675121 | chr17_82414356_- | intronic |
| ADediting_675122 | chr17_82414357_- | intronic |
| ADediting_675123 | chr17_82414362_- | intronic |
| ADediting_675124 | chr17_82414364_- | intronic |
| ADediting_675125 | chr17_82414365_- | intronic |
| ADediting_675126 | chr17_82414384_- | intronic |
| ADediting_675128 | chr17_82416795_- | intronic |
| ADediting_675129 | chr17_82416845_- | intronic |
| ADediting_675130 | chr17_82416888_- | intronic |
| ADediting_675131 | chr17_82416902_- | intronic |
| ADediting_675132 | chr17_82416912_- | intronic |
| ADediting_675133 | chr17_82416948_- | intronic |
| ADediting_675134 | chr17_82417572_- | intronic |
| ADediting_1550055 | chr17_82389555_- | UTR3 |
| ADediting_1550056 | chr17_82390019_- | UTR3 |
| ADediting_1550057 | chr17_82395057_- | intronic |
| ADediting_1550058 | chr17_82395121_- | intronic |
| ADediting_1550059 | chr17_82395207_- | intronic |
| ADediting_1550060 | chr17_82395250_- | intronic |
| ADediting_1550061 | chr17_82407951_- | intronic |
| ADediting_1550062 | chr17_82407960_- | intronic |
| ADediting_1550063 | chr17_82410898_- | intronic |
| ADediting_1550064 | chr17_82414309_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_674957 | chr17_82389517_- | SINE | Alu | Name=AluJb |
| ADediting_674958 | chr17_82389518_- | SINE | Alu | Name=AluJb |
| ADediting_674959 | chr17_82389519_- | SINE | Alu | Name=AluJb |
| ADediting_674960 | chr17_82389520_- | SINE | Alu | Name=AluJb |
| ADediting_674961 | chr17_82389534_- | SINE | Alu | Name=AluJb |
| ADediting_674962 | chr17_82389560_- | SINE | Alu | Name=AluJb |
| ADediting_674963 | chr17_82389575_- | SINE | Alu | Name=AluJb |
| ADediting_674964 | chr17_82389581_- | SINE | Alu | Name=AluJb |
| ADediting_674965 | chr17_82389614_- | SINE | Alu | Name=AluJb |
| ADediting_674966 | chr17_82389618_- | SINE | Alu | Name=AluJb |
| ADediting_674967 | chr17_82389629_- | SINE | Alu | Name=AluJb |
| ADediting_674968 | chr17_82389633_- | SINE | Alu | Name=AluJb |
| ADediting_674969 | chr17_82389652_- | SINE | Alu | Name=AluJb |
| ADediting_674970 | chr17_82389665_- | SINE | Alu | Name=AluJb |
| ADediting_674971 | chr17_82389684_- | SINE | Alu | Name=AluJb |
| ADediting_674972 | chr17_82389747_- | SINE | Alu | Name=AluJb |
| ADediting_674973 | chr17_82389751_- | SINE | Alu | Name=AluJb |
| ADediting_674974 | chr17_82389755_- | SINE | Alu | Name=AluJb |
| ADediting_674975 | chr17_82389756_- | SINE | Alu | Name=AluJb |
| ADediting_674976 | chr17_82389777_- | SINE | Alu | Name=AluJb |
| ADediting_674977 | chr17_82389778_- | SINE | Alu | Name=AluJb |
| ADediting_674978 | chr17_82389830_- | SINE | Alu | Name=AluY |
| ADediting_674979 | chr17_82389838_- | SINE | Alu | Name=AluY |
| ADediting_674980 | chr17_82389843_- | SINE | Alu | Name=AluY |
| ADediting_674981 | chr17_82389852_- | SINE | Alu | Name=AluY |
| ADediting_674982 | chr17_82389855_- | SINE | Alu | Name=AluY |
| ADediting_674983 | chr17_82389861_- | SINE | Alu | Name=AluY |
| ADediting_674984 | chr17_82389886_- | SINE | Alu | Name=AluY |
| ADediting_674985 | chr17_82389909_- | SINE | Alu | Name=AluY |
| ADediting_674986 | chr17_82389920_- | SINE | Alu | Name=AluY |
| ADediting_674987 | chr17_82389921_- | SINE | Alu | Name=AluY |
| ADediting_674988 | chr17_82389934_- | SINE | Alu | Name=AluY |
| ADediting_674989 | chr17_82389937_- | SINE | Alu | Name=AluY |
| ADediting_674990 | chr17_82389952_- | SINE | Alu | Name=AluY |
| ADediting_674991 | chr17_82389958_- | SINE | Alu | Name=AluY |
| ADediting_674992 | chr17_82389964_- | SINE | Alu | Name=AluY |
| ADediting_674993 | chr17_82389974_- | SINE | Alu | Name=AluY |
| ADediting_674994 | chr17_82389983_- | SINE | Alu | Name=AluY |
| ADediting_674995 | chr17_82389995_- | SINE | Alu | Name=AluY |
| ADediting_674996 | chr17_82390007_- | SINE | Alu | Name=AluY |
| ADediting_674997 | chr17_82391397_- | SINE | Alu | Name=AluSz |
| ADediting_674998 | chr17_82391428_- | SINE | Alu | Name=AluSz |
| ADediting_674999 | chr17_82391435_- | SINE | Alu | Name=AluSz |
| ADediting_675000 | chr17_82391454_- | SINE | Alu | Name=AluSz |
| ADediting_675001 | chr17_82391471_- | SINE | Alu | Name=AluSz |
| ADediting_675002 | chr17_82391514_- | SINE | Alu | Name=AluSz |
| ADediting_675003 | chr17_82391516_- | SINE | Alu | Name=AluSz |
| ADediting_675004 | chr17_82391524_- | SINE | Alu | Name=AluSz |
| ADediting_675005 | chr17_82391567_- | SINE | Alu | Name=AluSz |
| ADediting_675006 | chr17_82391593_- | SINE | Alu | Name=AluSz |
| ADediting_675008 | chr17_82394037_- | SINE | Alu | Name=AluY |
| ADediting_675009 | chr17_82394052_- | SINE | Alu | Name=AluY |
| ADediting_675010 | chr17_82394058_- | SINE | Alu | Name=AluY |
| ADediting_675011 | chr17_82394075_- | SINE | Alu | Name=AluY |
| ADediting_675012 | chr17_82394082_- | SINE | Alu | Name=AluY |
| ADediting_675013 | chr17_82394101_- | SINE | Alu | Name=AluY |
| ADediting_675014 | chr17_82394115_- | SINE | Alu | Name=AluY |
| ADediting_675015 | chr17_82394118_- | SINE | Alu | Name=AluY |
| ADediting_675016 | chr17_82394128_- | SINE | Alu | Name=AluY |
| ADediting_675017 | chr17_82394154_- | SINE | Alu | Name=AluY |
| ADediting_675018 | chr17_82394168_- | SINE | Alu | Name=AluY |
| ADediting_675019 | chr17_82394186_- | SINE | Alu | Name=AluY |
| ADediting_675020 | chr17_82394193_- | SINE | Alu | Name=AluY |
| ADediting_675021 | chr17_82394195_- | SINE | Alu | Name=AluY |
| ADediting_675022 | chr17_82394196_- | SINE | Alu | Name=AluY |
| ADediting_675023 | chr17_82394219_- | SINE | Alu | Name=AluY |
| ADediting_675024 | chr17_82394240_- | SINE | Alu | Name=AluY |
| ADediting_675025 | chr17_82394241_- | SINE | Alu | Name=AluY |
| ADediting_675026 | chr17_82394263_- | SINE | Alu | Name=AluY |
| ADediting_675027 | chr17_82395129_- | SINE | Alu | Name=AluJb |
| ADediting_675028 | chr17_82395156_- | SINE | Alu | Name=AluJb |
| ADediting_675029 | chr17_82395170_- | SINE | Alu | Name=AluJb |
| ADediting_675030 | chr17_82395172_- | SINE | Alu | Name=AluJb |
| ADediting_675031 | chr17_82395199_- | SINE | Alu | Name=AluJb |
| ADediting_675032 | chr17_82395205_- | SINE | Alu | Name=AluJb |
| ADediting_675033 | chr17_82395208_- | SINE | Alu | Name=AluJb |
| ADediting_675034 | chr17_82395209_- | SINE | Alu | Name=AluJb |
| ADediting_675035 | chr17_82395227_- | SINE | Alu | Name=AluJb |
| ADediting_675036 | chr17_82395228_- | SINE | Alu | Name=AluJb |
| ADediting_675037 | chr17_82395233_- | SINE | Alu | Name=AluJb |
| ADediting_675038 | chr17_82395234_- | SINE | Alu | Name=AluJb |
| ADediting_675039 | chr17_82395235_- | SINE | Alu | Name=AluJb |
| ADediting_675040 | chr17_82395236_- | SINE | Alu | Name=AluJb |
| ADediting_675041 | chr17_82395251_- | SINE | Alu | Name=AluJb |
| ADediting_675042 | chr17_82395274_- | SINE | Alu | Name=AluJb |
| ADediting_675043 | chr17_82395278_- | SINE | Alu | Name=AluJb |
| ADediting_675044 | chr17_82395303_- | SINE | Alu | Name=AluJb |
| ADediting_675045 | chr17_82395304_- | SINE | Alu | Name=AluJb |
| ADediting_675046 | chr17_82395310_- | SINE | Alu | Name=AluJb |
| ADediting_675047 | chr17_82395326_- | SINE | Alu | Name=AluJb |
| ADediting_675048 | chr17_82395617_- | SINE | Alu | Name=AluY |
| ADediting_675049 | chr17_82395632_- | SINE | Alu | Name=AluY |
| ADediting_675050 | chr17_82395640_- | SINE | Alu | Name=AluY |
| ADediting_675051 | chr17_82395657_- | SINE | Alu | Name=AluY |
| ADediting_675052 | chr17_82395663_- | SINE | Alu | Name=AluY |
| ADediting_675053 | chr17_82395673_- | SINE | Alu | Name=AluY |
| ADediting_675054 | chr17_82395697_- | SINE | Alu | Name=AluY |
| ADediting_675055 | chr17_82395699_- | SINE | Alu | Name=AluY |
| ADediting_675056 | chr17_82395709_- | SINE | Alu | Name=AluY |
| ADediting_675057 | chr17_82395758_- | SINE | Alu | Name=AluY |
| ADediting_675058 | chr17_82398599_- | SINE | Alu | Name=AluSx1 |
| ADediting_675059 | chr17_82401323_- | SINE | Alu | Name=AluY |
| ADediting_675060 | chr17_82401343_- | SINE | Alu | Name=AluY |
| ADediting_675061 | chr17_82401638_- | SINE | Alu | Name=AluSx |
| ADediting_675062 | chr17_82401641_- | SINE | Alu | Name=AluSx |
| ADediting_675063 | chr17_82402178_- | SINE | Alu | Name=AluSz |
| ADediting_675064 | chr17_82402352_- | SINE | Alu | Name=AluSz |
| ADediting_675065 | chr17_82402375_- | SINE | Alu | Name=AluSz |
| ADediting_675068 | chr17_82403375_- | SINE | Alu | Name=AluSx |
| ADediting_675069 | chr17_82403410_- | SINE | Alu | Name=AluSx |
| ADediting_675070 | chr17_82403411_- | SINE | Alu | Name=AluSx |
| ADediting_675071 | chr17_82403435_- | SINE | Alu | Name=AluSx |
| ADediting_675072 | chr17_82403466_- | SINE | Alu | Name=AluSx |
| ADediting_675073 | chr17_82403469_- | SINE | Alu | Name=AluSx |
| ADediting_675075 | chr17_82403532_- | SINE | Alu | Name=AluSx |
| ADediting_675076 | chr17_82403545_- | SINE | Alu | Name=AluSx |
| ADediting_675083 | chr17_82406775_- | SINE | Alu | Name=AluJb |
| ADediting_675084 | chr17_82406801_- | SINE | Alu | Name=AluJb |
| ADediting_675085 | chr17_82406810_- | SINE | Alu | Name=AluJb |
| ADediting_675086 | chr17_82406996_- | SINE | Alu | Name=AluSq2 |
| ADediting_675087 | chr17_82406997_- | SINE | Alu | Name=AluSq2 |
| ADediting_675088 | chr17_82407026_- | SINE | Alu | Name=AluSq2 |
| ADediting_675089 | chr17_82407156_- | SINE | Alu | Name=AluSq2 |
| ADediting_675090 | chr17_82407226_- | SINE | Alu | Name=AluSq2 |
| ADediting_675093 | chr17_82408043_- | SINE | Alu | Name=AluSx |
| ADediting_675094 | chr17_82408104_- | SINE | Alu | Name=AluSx |
| ADediting_675097 | chr17_82409703_- | SINE | Alu | Name=AluSg |
| ADediting_675098 | chr17_82409732_- | SINE | Alu | Name=AluSg |
| ADediting_675099 | chr17_82409773_- | SINE | Alu | Name=AluSg |
| ADediting_675100 | chr17_82409783_- | SINE | Alu | Name=AluSg |
| ADediting_675101 | chr17_82409795_- | SINE | Alu | Name=AluSg |
| ADediting_675102 | chr17_82409812_- | SINE | Alu | Name=AluSg |
| ADediting_675103 | chr17_82409813_- | SINE | Alu | Name=AluSg |
| ADediting_675105 | chr17_82411289_- | SINE | Alu | Name=AluSx |
| ADediting_675108 | chr17_82413653_- | SINE | Alu | Name=AluSx1 |
| ADediting_675109 | chr17_82413667_- | SINE | Alu | Name=AluSx1 |
| ADediting_675110 | chr17_82413687_- | SINE | Alu | Name=AluSx1 |
| ADediting_675111 | chr17_82413749_- | SINE | Alu | Name=AluSx1 |
| ADediting_675112 | chr17_82413771_- | SINE | Alu | Name=AluSx1 |
| ADediting_675113 | chr17_82413838_- | SINE | Alu | Name=AluSx1 |
| ADediting_675114 | chr17_82414199_- | SINE | Alu | Name=AluJr |
| ADediting_675115 | chr17_82414252_- | SINE | Alu | Name=AluJr |
| ADediting_675116 | chr17_82414261_- | SINE | Alu | Name=AluJr |
| ADediting_675117 | chr17_82414278_- | SINE | Alu | Name=AluJr |
| ADediting_675118 | chr17_82414308_- | SINE | Alu | Name=AluJr |
| ADediting_675119 | chr17_82414326_- | SINE | Alu | Name=AluJr |
| ADediting_675120 | chr17_82414337_- | SINE | Alu | Name=AluJr |
| ADediting_675121 | chr17_82414356_- | SINE | Alu | Name=AluJr |
| ADediting_675122 | chr17_82414357_- | SINE | Alu | Name=AluJr |
| ADediting_675123 | chr17_82414362_- | SINE | Alu | Name=AluJr |
| ADediting_675124 | chr17_82414364_- | SINE | Alu | Name=AluJr |
| ADediting_675125 | chr17_82414365_- | SINE | Alu | Name=AluJr |
| ADediting_675126 | chr17_82414384_- | SINE | Alu | Name=AluJr |
| ADediting_675128 | chr17_82416795_- | SINE | Alu | Name=AluSq2 |
| ADediting_675129 | chr17_82416845_- | SINE | Alu | Name=AluSq2 |
| ADediting_675130 | chr17_82416888_- | SINE | Alu | Name=AluSq2 |
| ADediting_675131 | chr17_82416902_- | SINE | Alu | Name=AluSq2 |
| ADediting_675132 | chr17_82416912_- | SINE | Alu | Name=AluSq2 |
| ADediting_675133 | chr17_82416948_- | SINE | Alu | Name=AluSq2 |
| ADediting_675134 | chr17_82417572_- | SINE | Alu | Name=AluSx1 |
| ADediting_1550055 | chr17_82389555_- | SINE | Alu | Name=AluJb |
| ADediting_1550056 | chr17_82390019_- | SINE | Alu | Name=AluY |
| ADediting_1550057 | chr17_82395057_- | SINE | Alu | Name=AluJb |
| ADediting_1550058 | chr17_82395121_- | SINE | Alu | Name=AluJb |
| ADediting_1550059 | chr17_82395207_- | SINE | Alu | Name=AluJb |
| ADediting_1550060 | chr17_82395250_- | SINE | Alu | Name=AluJb |
| ADediting_1550061 | chr17_82407951_- | SINE | Alu | Name=AluSx |
| ADediting_1550062 | chr17_82407960_- | SINE | Alu | Name=AluSx |
| ADediting_1550063 | chr17_82410898_- | SINE | Alu | Name=AluSx |
| ADediting_1550064 | chr17_82414309_- | SINE | Alu | Name=AluJr |
Top |
RNA A-to-I editing events in the alternative splicing sites for OGFOD3 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for OGFOD3 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for OGFOD3 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for OGFOD3 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_674960 | chr17_82389520_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-526b-5p | chr17 | 82389518 | 82389525 | 8mer-1a | 82389518 | 82389540 | 154 | -17.98 |
| ADediting_674961 | chr17_82389534_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-370-3p | chr17 | 82389532 | 82389539 | 8mer-1a | 82389532 | 82389553 | 140 | -20.66 |
| ADediting_674961 | chr17_82389534_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6893-3p | chr17 | 82389532 | 82389539 | 8mer-1a | 82389532 | 82389553 | 153 | -21.22 |
| ADediting_674962 | chr17_82389560_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-7846-3p | chr17 | 82389558 | 82389564 | 7mer-m8 | 82389557 | 82389577 | 153 | -25.64 |
| ADediting_674963 | chr17_82389575_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4690-3p | chr17 | 82389571 | 82389577 | 7mer-m8 | 82389570 | 82389589 | 169 | -29.96 |
| ADediting_674963 | chr17_82389575_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-5685 | chr17 | 82389571 | 82389577 | 7mer-m8 | 82389570 | 82389590 | 150 | -21.19 |
| ADediting_674963 | chr17_82389575_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6856-3p | chr17 | 82389570 | 82389576 | 7mer-m8 | 82389569 | 82389592 | 152 | -24.36 |
| ADediting_674964 | chr17_82389581_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1184 | chr17 | 82389578 | 82389584 | 7mer-m8 | 82389577 | 82389602 | 156 | -24.52 |
| ADediting_674964 | chr17_82389581_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4418 | chr17 | 82389577 | 82389583 | 7mer-m8 | 82389576 | 82389592 | 146 | -20.25 |
| ADediting_674964 | chr17_82389581_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-509-3-5p | chr17 | 82389577 | 82389583 | 7mer-m8 | 82389576 | 82389597 | 151 | -22.31 |
| ADediting_674964 | chr17_82389581_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-509-5p | chr17 | 82389577 | 82389583 | 7mer-m8 | 82389576 | 82389596 | 142 | -22.1 |
| ADediting_674964 | chr17_82389581_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-7156-3p | chr17 | 82389579 | 82389585 | 7mer-m8 | 82389578 | 82389600 | 142 | -25.19 |
| ADediting_674966 | chr17_82389618_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1913 | chr17 | 82389613 | 82389619 | 7mer-m8 | 82389612 | 82389637 | 156 | -31.36 |
| ADediting_674966 | chr17_82389618_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4267 | chr17 | 82389618 | 82389624 | 7mer-m8 | 82389617 | 82389634 | 149 | -22.68 |
| ADediting_674967 | chr17_82389629_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1207-3p | chr17 | 82389629 | 82389635 | 7mer-m8 | 82389628 | 82389646 | 145 | -15.47 |
| ADediting_674967 | chr17_82389629_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-646 | chr17 | 82389627 | 82389633 | 7mer-m8 | 82389626 | 82389644 | 145 | -17.14 |
| ADediting_674970 | chr17_82389665_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-449b-3p | chr17 | 82389662 | 82389668 | 7mer-m8 | 82389661 | 82389682 | 140 | -14.77 |
| ADediting_674970 | chr17_82389665_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4691-3p | chr17 | 82389661 | 82389667 | 7mer-m8 | 82389660 | 82389684 | 146 | -24.77 |
| ADediting_674971 | chr17_82389684_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-486-5p | chr17 | 82389682 | 82389689 | 8mer-1a | 82389682 | 82389702 | 150 | -17.23 |
| ADediting_674971 | chr17_82389684_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-7152-5p | chr17 | 82389680 | 82389687 | 8mer-1a | 82389680 | 82389701 | 142 | -14.94 |
| ADediting_674973 | chr17_82389751_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1224-3p | chr17 | 82389748 | 82389755 | 8mer-1a | 82389748 | 82389771 | 149 | -23.8 |
| ADediting_674973 | chr17_82389751_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1260a | chr17 | 82389747 | 82389754 | 8mer-1a | 82389747 | 82389764 | 156 | -25.21 |
| ADediting_674973 | chr17_82389751_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1260b | chr17 | 82389747 | 82389754 | 8mer-1a | 82389747 | 82389765 | 153 | -21.29 |
| ADediting_674974 | chr17_82389755_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3176 | chr17 | 82389755 | 82389761 | 7mer-m8 | 82389754 | 82389772 | 140 | -15.24 |
| ADediting_674974 | chr17_82389755_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3922-3p | chr17 | 82389755 | 82389761 | 7mer-m8 | 82389754 | 82389775 | 141 | -19.73 |
| ADediting_674976 | chr17_82389777_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3199 | chr17 | 82389772 | 82389778 | 7mer-1a | 82389772 | 82389795 | 140 | -21.93 |
| ADediting_674977 | chr17_82389778_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1226-3p | chr17 | 82389777 | 82389784 | 8mer-1a | 82389777 | 82389804 | 157 | -30.23 |
| ADediting_674977 | chr17_82389778_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-638 | chr17 | 82389772 | 82389778 | 7mer-1a | 82389772 | 82389796 | 145 | -25.89 |
| ADediting_674978 | chr17_82389830_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3190-5p | chr17 | 82389824 | 82389831 | 8mer-1a | 82389824 | 82389842 | 152 | -22.97 |
| ADediting_674978 | chr17_82389830_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-548s | chr17 | 82389826 | 82389832 | 7mer-m8 | 82389825 | 82389849 | 153 | -14.49 |
| ADediting_674980 | chr17_82389843_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6771-3p | chr17 | 82389840 | 82389846 | 7mer-m8 | 82389839 | 82389860 | 158 | -18.1 |
| ADediting_674984 | chr17_82389886_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-10400-5p | chr17 | 82389883 | 82389890 | 8mer-1a | 82389883 | 82389904 | 161 | -28.01 |
| ADediting_674984 | chr17_82389886_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3960 | chr17 | 82389885 | 82389891 | 7mer-m8 | 82389884 | 82389904 | 141 | -24.57 |
| ADediting_674984 | chr17_82389886_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4467 | chr17 | 82389883 | 82389890 | 8mer-1a | 82389883 | 82389905 | 151 | -24.75 |
| ADediting_674984 | chr17_82389886_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6770-3p | chr17 | 82389883 | 82389889 | 7mer-m8 | 82389882 | 82389903 | 150 | -21.06 |
| ADediting_674984 | chr17_82389886_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-8072 | chr17 | 82389885 | 82389891 | 7mer-m8 | 82389884 | 82389905 | 148 | -30.51 |
| ADediting_674985 | chr17_82389909_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4691-3p | chr17 | 82389905 | 82389911 | 7mer-m8 | 82389904 | 82389928 | 142 | -24.74 |
| ADediting_674986 | chr17_82389920_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3929 | chr17 | 82389917 | 82389923 | 7mer-m8 | 82389916 | 82389937 | 156 | -18.66 |
| ADediting_674986 | chr17_82389920_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4478 | chr17 | 82389917 | 82389923 | 7mer-m8 | 82389916 | 82389931 | 149 | -25.05 |
| ADediting_674986 | chr17_82389920_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4649-3p | chr17 | 82389920 | 82389926 | 7mer-m8 | 82389919 | 82389939 | 140 | -14.11 |
| ADediting_674986 | chr17_82389920_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-485-5p | chr17 | 82389916 | 82389922 | 7mer-m8 | 82389915 | 82389936 | 157 | -19.07 |
| ADediting_674986 | chr17_82389920_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6884-5p | chr17 | 82389916 | 82389922 | 7mer-m8 | 82389915 | 82389938 | 161 | -24.41 |
| ADediting_674986 | chr17_82389920_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-7160-5p | chr17 | 82389919 | 82389925 | 7mer-m8 | 82389918 | 82389937 | 149 | -18.69 |
| ADediting_674988 | chr17_82389934_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6786-5p | chr17 | 82389934 | 82389940 | 7mer-m8 | 82389933 | 82389953 | 158 | -31.51 |
| ADediting_674991 | chr17_82389958_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-17-3p | chr17 | 82389958 | 82389964 | 7mer-m8 | 82389957 | 82389978 | 150 | -17.09 |
| ADediting_674991 | chr17_82389958_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4725-5p | chr17 | 82389954 | 82389960 | 7mer-m8 | 82389953 | 82389973 | 155 | -21.94 |
| ADediting_674991 | chr17_82389958_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-504-5p | chr17 | 82389954 | 82389960 | 7mer-m8 | 82389953 | 82389973 | 142 | -15.52 |
| ADediting_674993 | chr17_82389974_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-873-3p | chr17 | 82389970 | 82389976 | 7mer-m8 | 82389969 | 82389995 | 141 | -22.1 |
| ADediting_674995 | chr17_82389995_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3940-3p | chr17 | 82389991 | 82389997 | 7mer-m8 | 82389990 | 82390011 | 147 | -22.47 |
| ADediting_674997 | chr17_82391397_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-143-5p | chr17 | 82391394 | 82391400 | 7mer-m8 | 82391393 | 82391415 | 167 | -26.83 |
| ADediting_674997 | chr17_82391397_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-5693 | chr17 | 82391397 | 82391403 | 7mer-m8 | 82391396 | 82391416 | 143 | -19.73 |
| ADediting_674998 | chr17_82391428_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-718 | chr17 | 82391425 | 82391431 | 7mer-m8 | 82391424 | 82391443 | 158 | -32.35 |
| ADediting_674999 | chr17_82391435_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-5587-3p | chr17 | 82391432 | 82391438 | 7mer-m8 | 82391431 | 82391452 | 150 | -24.92 |
| ADediting_674999 | chr17_82391435_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6840-5p | chr17 | 82391431 | 82391437 | 7mer-m8 | 82391430 | 82391460 | 149 | -32.3 |
| ADediting_675001 | chr17_82391471_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1207-3p | chr17 | 82391471 | 82391477 | 7mer-m8 | 82391470 | 82391487 | 148 | -12.56 |
| ADediting_675001 | chr17_82391471_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4530 | chr17 | 82391467 | 82391473 | 7mer-m8 | 82391466 | 82391482 | 145 | -23.81 |
| ADediting_675001 | chr17_82391471_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-646 | chr17 | 82391469 | 82391475 | 7mer-m8 | 82391468 | 82391486 | 145 | -13.43 |
| ADediting_675002 | chr17_82391514_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3158-3p | chr17 | 82391510 | 82391516 | 7mer-m8 | 82391509 | 82391529 | 150 | -19.46 |
| ADediting_675003 | chr17_82391516_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-23a-5p | chr17 | 82391511 | 82391517 | 7mer-m8 | 82391510 | 82391532 | 144 | -18.43 |
| ADediting_675003 | chr17_82391516_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-23b-5p | chr17 | 82391511 | 82391517 | 7mer-m8 | 82391510 | 82391530 | 160 | -21.78 |
| ADediting_675003 | chr17_82391516_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6084 | chr17 | 82391514 | 82391521 | 8mer-1a | 82391514 | 82391531 | 154 | -28.35 |
| ADediting_675003 | chr17_82391516_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-718 | chr17 | 82391514 | 82391520 | 7mer-m8 | 82391513 | 82391533 | 146 | -23.29 |
| ADediting_675004 | chr17_82391524_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3190-5p | chr17 | 82391524 | 82391530 | 7mer-m8 | 82391523 | 82391542 | 152 | -19.64 |
| ADediting_675006 | chr17_82391593_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3672 | chr17 | 82391588 | 82391594 | 7mer-m8 | 82391587 | 82391612 | 155 | -15.79 |
| ADediting_675006 | chr17_82391593_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6864-3p | chr17 | 82391588 | 82391594 | 7mer-m8 | 82391587 | 82391607 | 142 | -10.4 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1550056 | chr17_82390019_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-340-3p | chr17 | 82390013 | 82390020 | 8mer-1a | 82390013 | 82390034 | 146 | -18.88 |
| ADediting_1550056 | chr17_82390019_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-371b-5p | chr17 | 82390017 | 82390024 | 8mer-1a | 82390017 | 82390038 | 150 | -11.38 |
| ADediting_1550056 | chr17_82390019_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-373-5p | chr17 | 82390017 | 82390024 | 8mer-1a | 82390017 | 82390038 | 144 | -11.44 |
| ADediting_1550056 | chr17_82390019_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-616-5p | chr17 | 82390017 | 82390024 | 8mer-1a | 82390017 | 82390038 | 140 | -5.88 |
| ADediting_1550056 | chr17_82390019_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6827-3p | chr17 | 82390013 | 82390020 | 8mer-1a | 82390013 | 82390033 | 140 | -14.67 |
| ADediting_674964 | chr17_82389581_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1183 | chr17 | 82389577 | 82389583 | 7mer-m8 | 82389576 | 82389602 | 140 | -25.07 |
| ADediting_674965 | chr17_82389614_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6747-3p | chr17 | 82389611 | 82389618 | 8mer-1a | 82389611 | 82389632 | 150 | -23.73 |
| ADediting_674966 | chr17_82389618_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6787-3p | chr17 | 82389617 | 82389623 | 7mer-m8 | 82389616 | 82389637 | 142 | -16.73 |
| ADediting_674969 | chr17_82389652_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-12121 | chr17 | 82389652 | 82389658 | 7mer-m8 | 82389651 | 82389670 | 141 | -22.44 |
| ADediting_674970 | chr17_82389665_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-222-3p | chr17 | 82389663 | 82389669 | 7mer-m8 | 82389662 | 82389682 | 142 | -10.55 |
| ADediting_674970 | chr17_82389665_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-5690 | chr17 | 82389661 | 82389667 | 7mer-m8 | 82389660 | 82389677 | 142 | -14.51 |
| ADediting_674971 | chr17_82389684_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-578 | chr17 | 82389680 | 82389687 | 8mer-1a | 82389680 | 82389700 | 146 | -13.17 |
| ADediting_674972 | chr17_82389747_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-141-5p | chr17 | 82389744 | 82389750 | 7mer-m8 | 82389743 | 82389762 | 146 | -14.08 |
| ADediting_674972 | chr17_82389747_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3685 | chr17 | 82389747 | 82389753 | 7mer-m8 | 82389746 | 82389771 | 154 | -21.82 |
| ADediting_674973 | chr17_82389751_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3685 | chr17 | 82389747 | 82389753 | 7mer-m8 | 82389746 | 82389771 | 154 | -21.82 |
| ADediting_674975 | chr17_82389756_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6878-3p | chr17 | 82389755 | 82389762 | 8mer-1a | 82389755 | 82389775 | 142 | -14.14 |
| ADediting_674976 | chr17_82389777_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-5089-5p | chr17 | 82389772 | 82389778 | 7mer-m8 | 82389771 | 82389790 | 150 | -15.3 |
| ADediting_674978 | chr17_82389830_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3064-5p | chr17 | 82389824 | 82389830 | 7mer-1a | 82389824 | 82389844 | 144 | -24.18 |
| ADediting_674978 | chr17_82389830_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4794 | chr17 | 82389824 | 82389831 | 8mer-1a | 82389824 | 82389846 | 145 | -20.93 |
| ADediting_674978 | chr17_82389830_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-664a-5p | chr17 | 82389824 | 82389831 | 8mer-1a | 82389824 | 82389851 | 143 | -16.67 |
| ADediting_674980 | chr17_82389843_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-605-5p | chr17 | 82389840 | 82389846 | 7mer-m8 | 82389839 | 82389861 | 150 | -13.6 |
| ADediting_674981 | chr17_82389852_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3675-3p | chr17 | 82389847 | 82389853 | 7mer-m8 | 82389846 | 82389867 | 145 | -12.58 |
| ADediting_674985 | chr17_82389909_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-5690 | chr17 | 82389905 | 82389911 | 7mer-m8 | 82389904 | 82389924 | 145 | -16.75 |
| ADediting_674986 | chr17_82389920_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1304-5p | chr17 | 82389920 | 82389926 | 7mer-m8 | 82389919 | 82389940 | 148 | -17.68 |
| ADediting_674987 | chr17_82389921_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1304-5p | chr17 | 82389920 | 82389926 | 7mer-m8 | 82389919 | 82389940 | 148 | -17.68 |
| ADediting_674987 | chr17_82389921_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6765-5p | chr17 | 82389920 | 82389926 | 7mer-1a | 82389920 | 82389941 | 150 | -27.23 |
| ADediting_674988 | chr17_82389934_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4790-3p | chr17 | 82389931 | 82389937 | 7mer-m8 | 82389930 | 82389951 | 140 | -9.9 |
| ADediting_674990 | chr17_82389952_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-12114 | chr17 | 82389949 | 82389955 | 7mer-m8 | 82389948 | 82389970 | 143 | -20.2 |
| ADediting_674990 | chr17_82389952_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4535 | chr17 | 82389952 | 82389958 | 7mer-m8 | 82389951 | 82389967 | 151 | -19.52 |
| ADediting_674990 | chr17_82389952_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4800-5p | chr17 | 82389951 | 82389957 | 7mer-m8 | 82389950 | 82389970 | 145 | -17.5 |
| ADediting_674990 | chr17_82389952_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6134 | chr17 | 82389948 | 82389954 | 7mer-m8 | 82389947 | 82389964 | 143 | -19.08 |
| ADediting_674990 | chr17_82389952_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6851-5p | chr17 | 82389947 | 82389953 | 7mer-m8 | 82389946 | 82389968 | 154 | -24.94 |
| ADediting_674991 | chr17_82389958_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-3200-3p | chr17 | 82389955 | 82389961 | 7mer-m8 | 82389954 | 82389977 | 149 | -15.83 |
| ADediting_674991 | chr17_82389958_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6516-5p | chr17 | 82389958 | 82389964 | 7mer-m8 | 82389957 | 82389979 | 144 | -17.11 |
| ADediting_674991 | chr17_82389958_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6841-3p | chr17 | 82389956 | 82389962 | 7mer-m8 | 82389955 | 82389973 | 141 | -14.12 |
| ADediting_674993 | chr17_82389974_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-5186 | chr17 | 82389970 | 82389976 | 7mer-m8 | 82389969 | 82389989 | 140 | -10.42 |
| ADediting_674994 | chr17_82389983_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-324-3p | chr17 | 82389979 | 82389985 | 7mer-m8 | 82389978 | 82390000 | 148 | -24.15 |
| ADediting_674994 | chr17_82389983_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4252 | chr17 | 82389978 | 82389984 | 7mer-m8 | 82389977 | 82389997 | 149 | -21.82 |
| ADediting_674994 | chr17_82389983_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4793-3p | chr17 | 82389982 | 82389988 | 7mer-m8 | 82389981 | 82390003 | 153 | -23.14 |
| ADediting_674995 | chr17_82389995_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4486 | chr17 | 82389994 | 82390000 | 7mer-m8 | 82389993 | 82390009 | 145 | -17.61 |
| ADediting_674995 | chr17_82389995_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-661 | chr17 | 82389992 | 82389998 | 7mer-m8 | 82389991 | 82390014 | 146 | -18.31 |
| ADediting_674995 | chr17_82389995_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-939-3p | chr17 | 82389993 | 82389999 | 7mer-m8 | 82389992 | 82390012 | 141 | -15.42 |
| ADediting_674996 | chr17_82390007_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-7702 | chr17 | 82390007 | 82390013 | 7mer-m8 | 82390006 | 82390025 | 149 | -12.8 |
| ADediting_674997 | chr17_82391397_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4280 | chr17 | 82391393 | 82391399 | 7mer-m8 | 82391392 | 82391412 | 145 | -16.94 |
| ADediting_674998 | chr17_82391428_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1913 | chr17 | 82391426 | 82391433 | 8mer-1a | 82391426 | 82391447 | 152 | -22.39 |
| ADediting_674998 | chr17_82391428_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6738-3p | chr17 | 82391425 | 82391431 | 7mer-m8 | 82391424 | 82391450 | 144 | -18.04 |
| ADediting_674999 | chr17_82391435_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-331-3p | chr17 | 82391431 | 82391437 | 7mer-m8 | 82391430 | 82391450 | 146 | -20.27 |
| ADediting_674999 | chr17_82391435_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4292 | chr17 | 82391432 | 82391438 | 7mer-m8 | 82391431 | 82391448 | 140 | -21.97 |
| ADediting_674999 | chr17_82391435_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6742-3p | chr17 | 82391433 | 82391439 | 7mer-m8 | 82391432 | 82391451 | 145 | -14.84 |
| ADediting_674999 | chr17_82391435_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6791-5p | chr17 | 82391432 | 82391438 | 7mer-m8 | 82391431 | 82391452 | 147 | -31.8 |
| ADediting_675000 | chr17_82391454_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1976 | chr17 | 82391449 | 82391456 | 8mer-1a | 82391449 | 82391470 | 149 | -22.56 |
| ADediting_675002 | chr17_82391514_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6823-5p | chr17 | 82391509 | 82391515 | 7mer-m8 | 82391508 | 82391528 | 143 | -17.8 |
| ADediting_675004 | chr17_82391524_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4716-5p | chr17 | 82391519 | 82391525 | 7mer-m8 | 82391518 | 82391539 | 140 | -10.69 |
| ADediting_675004 | chr17_82391524_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4781-3p | chr17 | 82391521 | 82391527 | 7mer-m8 | 82391520 | 82391538 | 144 | -13.86 |
| ADediting_675005 | chr17_82391567_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-1976 | chr17 | 82391563 | 82391569 | 7mer-m8 | 82391562 | 82391582 | 149 | -28.61 |
| ADediting_675005 | chr17_82391567_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-660-3p | chr17 | 82391561 | 82391568 | 8mer-1a | 82391561 | 82391581 | 143 | -18.48 |
| ADediting_675005 | chr17_82391567_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6747-3p | chr17 | 82391564 | 82391571 | 8mer-1a | 82391564 | 82391587 | 155 | -25.99 |
| ADediting_675006 | chr17_82391593_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-10399-5p | chr17 | 82391592 | 82391598 | 7mer-m8 | 82391591 | 82391612 | 148 | -11.2 |
| ADediting_675006 | chr17_82391593_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-6504-3p | chr17 | 82391592 | 82391598 | 7mer-m8 | 82391591 | 82391612 | 145 | -14.35 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-589-3p | chr17 | 82390971 | 82390977 | 7mer-m8 | 82390970 | 82390993 | 166 | -30.27 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-589-5p | chr17 | 82389937 | 82389944 | 8mer-1a | 82389937 | 82389958 | 140 | -18.13 |
| ADediting_496066 | chr15_66496985_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-4512 | chr17 | 82390994 | 82391001 | 8mer-1a | 82390994 | 82391015 | 151 | -23.54 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-5581-3p | chr17 | 82390262 | 82390269 | 8mer-1a | 82390262 | 82390283 | 141 | -15.6 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-5688 | chr17 | 82390163 | 82390170 | 8mer-1a | 82390163 | 82390183 | 145 | -13.47 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-5585-3p | chr17 | 82390093 | 82390099 | 7mer-m8 | 82390092 | 82390112 | 151 | -9.35 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000181396.13 | ENST00000313056.10 | OGFOD3-201 | hsa-miR-5585-3p | chr17 | 82390093 | 82390099 | 7mer-m8 | 82390092 | 82390112 | 151 | -9.35 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for OGFOD3 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000313056.10 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_674957 | ENST00000313056.10 | chr17_82389517_- | 3942 | -1919.90 | -1919.80 | -1996.80 |
| ADediting_674958 | ENST00000313056.10 | chr17_82389518_- | 3941 | -1920.30 | -1919.80 | -1996.80 |
| ADediting_674959 | ENST00000313056.10 | chr17_82389519_- | 3940 | -1922.00 | -1919.80 | -1996.80 |
| ADediting_674960 | ENST00000313056.10 | chr17_82389520_- | 3939 | -1920.10 | -1919.80 | -1996.80 |
| ADediting_674961 | ENST00000313056.10 | chr17_82389534_- | 3925 | -1919.80 | -1919.80 | -1996.80 |
| ADediting_1550055 | ENST00000313056.10 | chr17_82389555_- | 3904 | -1921.70 | -1919.80 | -1996.80 |
| ADediting_674962 | ENST00000313056.10 | chr17_82389560_- | 3899 | -1919.80 | -1919.80 | -1996.80 |
| ADediting_674963 | ENST00000313056.10 | chr17_82389575_- | 3884 | -1921.90 | -1919.80 | -1996.80 |
| ADediting_674964 | ENST00000313056.10 | chr17_82389581_- | 3878 | -1921.40 | -1919.80 | -1996.80 |
| ADediting_674965 | ENST00000313056.10 | chr17_82389614_- | 3845 | -1919.10 | -1919.80 | -1996.80 |
| ADediting_674966 | ENST00000313056.10 | chr17_82389618_- | 3841 | -1923.40 | -1919.80 | -1996.80 |
| ADediting_674967 | ENST00000313056.10 | chr17_82389629_- | 3830 | -1919.80 | -1919.80 | -1996.80 |
| ADediting_674968 | ENST00000313056.10 | chr17_82389633_- | 3826 | -1921.50 | -1919.80 | -1996.80 |
| ADediting_674969 | ENST00000313056.10 | chr17_82389652_- | 3807 | -1922.70 | -1919.80 | -1996.80 |
| ADediting_674970 | ENST00000313056.10 | chr17_82389665_- | 3794 | -1919.50 | -1919.80 | -1996.80 |
| ADediting_674971 | ENST00000313056.10 | chr17_82389684_- | 3775 | -1920.00 | -1919.80 | -1996.80 |
| ADediting_674972 | ENST00000313056.10 | chr17_82389747_- | 3712 | -1924.80 | -1919.80 | -1996.80 |
| ADediting_674973 | ENST00000313056.10 | chr17_82389751_- | 3708 | -1921.00 | -1919.80 | -1996.80 |
| ADediting_674974 | ENST00000313056.10 | chr17_82389755_- | 3704 | -1924.80 | -1919.80 | -1996.80 |
| ADediting_674975 | ENST00000313056.10 | chr17_82389756_- | 3703 | -1920.10 | -1919.80 | -1996.80 |
| ADediting_674976 | ENST00000313056.10 | chr17_82389777_- | 3682 | -1919.80 | -1919.80 | -1996.80 |
| ADediting_674977 | ENST00000313056.10 | chr17_82389778_- | 3681 | -1920.10 | -1919.80 | -1996.80 |
| ADediting_674978 | ENST00000313056.10 | chr17_82389830_- | 3629 | -1926.40 | -1919.80 | -1996.80 |
| ADediting_674979 | ENST00000313056.10 | chr17_82389838_- | 3621 | -1925.20 | -1919.80 | -1996.80 |
| ADediting_674980 | ENST00000313056.10 | chr17_82389843_- | 3616 | -1926.50 | -1919.80 | -1996.80 |
| ADediting_674981 | ENST00000313056.10 | chr17_82389852_- | 3607 | -1919.50 | -1919.80 | -1996.80 |
| ADediting_674982 | ENST00000313056.10 | chr17_82389855_- | 3604 | -1919.50 | -1919.80 | -1996.80 |
| ADediting_674983 | ENST00000313056.10 | chr17_82389861_- | 3598 | -1926.00 | -1919.80 | -1996.80 |
| ADediting_674984 | ENST00000313056.10 | chr17_82389886_- | 3573 | -1923.40 | -1919.80 | -1996.80 |
| ADediting_674985 | ENST00000313056.10 | chr17_82389909_- | 3550 | -1919.50 | -1919.80 | -1996.80 |
| ADediting_674986 | ENST00000313056.10 | chr17_82389920_- | 3539 | -1926.50 | -1919.80 | -1996.80 |
| ADediting_674987 | ENST00000313056.10 | chr17_82389921_- | 3538 | -1919.10 | -1919.80 | -1996.80 |
| ADediting_674988 | ENST00000313056.10 | chr17_82389934_- | 3525 | -1920.10 | -1919.80 | -1996.80 |
| ADediting_674989 | ENST00000313056.10 | chr17_82389937_- | 3522 | -1923.80 | -1919.80 | -1996.80 |
| ADediting_674990 | ENST00000313056.10 | chr17_82389952_- | 3507 | -1923.70 | -1919.80 | -1996.80 |
| ADediting_674991 | ENST00000313056.10 | chr17_82389958_- | 3501 | -1918.80 | -1919.80 | -1996.80 |
| ADediting_674992 | ENST00000313056.10 | chr17_82389964_- | 3495 | -1919.40 | -1919.80 | -1996.80 |
| ADediting_674993 | ENST00000313056.10 | chr17_82389974_- | 3485 | -1920.00 | -1919.80 | -1996.80 |
| ADediting_674994 | ENST00000313056.10 | chr17_82389983_- | 3476 | -1919.80 | -1919.80 | -1996.80 |
| ADediting_674995 | ENST00000313056.10 | chr17_82389995_- | 3464 | -1919.10 | -1919.80 | -1996.80 |
| ADediting_674996 | ENST00000313056.10 | chr17_82390007_- | 3452 | -1920.10 | -1919.80 | -1996.80 |
| ADediting_1550056 | ENST00000313056.10 | chr17_82390019_- | 3440 | -1919.00 | -1919.80 | -1996.80 |
| ADediting_674997 | ENST00000313056.10 | chr17_82391397_- | 2062 | -1926.50 | -1919.80 | -1996.80 |
| ADediting_674998 | ENST00000313056.10 | chr17_82391428_- | 2031 | -1924.50 | -1919.80 | -1996.80 |
| ADediting_674999 | ENST00000313056.10 | chr17_82391435_- | 2024 | -1919.10 | -1919.80 | -1996.80 |
| ADediting_675000 | ENST00000313056.10 | chr17_82391454_- | 2005 | -1919.10 | -1919.80 | -1996.80 |
| ADediting_675001 | ENST00000313056.10 | chr17_82391471_- | 1988 | -1921.70 | -1919.80 | -1996.80 |
| ADediting_675002 | ENST00000313056.10 | chr17_82391514_- | 1945 | -1919.50 | -1919.80 | -1996.80 |
| ADediting_675003 | ENST00000313056.10 | chr17_82391516_- | 1943 | -1919.30 | -1919.80 | -1996.80 |
| ADediting_675004 | ENST00000313056.10 | chr17_82391524_- | 1935 | -1919.80 | -1919.80 | -1996.80 |
| ADediting_675005 | ENST00000313056.10 | chr17_82391567_- | 1892 | -1921.60 | -1919.80 | -1996.80 |
| ADediting_675006 | ENST00000313056.10 | chr17_82391593_- | 1866 | -1924.10 | -1919.80 | -1996.80 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for OGFOD3 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| TCX | ADediting_674963 | chr17_82389575_- | 0.0640587995907042 | 0.151589554015893 | 4.69240296364531e-05 | 0.325953820556056 | 0.0405169207232574 | -0.167472250140742 |
| DLPFC | ADediting_674964 | chr17_82389581_- | 3.48478116294535e-06 | 0.260035136086326 | 2.32945248552445e-13 | 0.400307827367042 | 0.573330898165499 | 0.0321063796478454 |
| TCX | ADediting_674964 | chr17_82389581_- | 0.00482436990631766 | 0.228981960640603 | 4.41789838121096e-12 | 0.526698505862921 | 8.325997430469e-05 | -0.31566338122755 |
| DLPFC | ADediting_674966 | chr17_82389618_- | 1.51236091749794e-08 | 0.314549427908593 | 2.47985754967643e-11 | 0.36724466741667 | 0.304825492157031 | 0.0584671716857881 |
| DLPFC | ADediting_674969 | chr17_82389652_- | 7.38530163928377e-11 | 0.358942746476878 | 1.27777682064489e-15 | 0.433307089028979 | 0.261289825564949 | 0.0639949713518768 |
| TCX | ADediting_674969 | chr17_82389652_- | 0.00211232069682388 | 0.249103547410298 | 0.000165227235475965 | 0.302851784927495 | 0.121588078210066 | -0.126955277746921 |
| DLPFC | ADediting_674974 | chr17_82389755_- | 8.7160735127857e-08 | 0.298213666693468 | 5.19002445982400e-11 | 0.361652540849107 | 0.33261797240954 | -0.0552082665946744 |
| DLPFC | ADediting_674975 | chr17_82389756_- | 1.55806325433454e-09 | 0.334378000323456 | 9.45891434155761e-12 | 0.374383999491731 | 0.951350619230599 | 0.00347922453191085 |
| DLPFC | ADediting_674976 | chr17_82389777_- | 1.1414589795118e-12 | 0.389462293802665 | 1.89610453164324e-20 | 0.493667389003063 | 0.278362117789898 | 0.0617581074710726 |
| TCX | ADediting_674976 | chr17_82389777_- | 8.93296474931436e-08 | 0.419769611220506 | 4.16330395243597e-07 | 0.39927717242915 | 0.124484020962319 | -0.125985575195283 |
| DLPFC | ADediting_674984 | chr17_82389886_- | 3.07415787368545e-11 | 0.365629133342948 | 1.80180502929521e-15 | 0.431236478754386 | 0.0784754112760575 | 0.100091882879435 |
| TCX | ADediting_674984 | chr17_82389886_- | 0.030920170309832 | 0.176300230848253 | 8.17068383943011e-06 | 0.355232459454229 | 0.0049712930141179 | -0.228219232042757 |
| DLPFC | ADediting_674985 | chr17_82389909_- | 1.70422830980716e-08 | 0.313466512972045 | 5.67210247525188e-12 | 0.378102175614847 | 0.0587764896391581 | 0.107460024847727 |
| TCX | ADediting_674985 | chr17_82389909_- | 0.0422786667935711 | 0.166047568160485 | 7.68281938366618e-06 | 0.356212185153666 | 0.0306796091450984 | -0.176549901876337 |
| DLPFC | ADediting_674987 | chr17_82389921_- | 3.48440971634819e-06 | 0.260036327907779 | 3.64723996620234e-12 | 0.381275211218973 | 0.245317397480555 | 0.0661807000864142 |
| DLPFC | ADediting_674991 | chr17_82389958_- | 1.38357598544796e-09 | 0.335376063543011 | 1.23843920126806e-20 | 0.495758264537202 | 0.303325154550964 | 0.0586485419466197 |
| TCX | ADediting_674991 | chr17_82389958_- | 0.0112883983888971 | 0.206365607633422 | 2.77217936662217e-07 | 0.404826181636554 | 0.0733980594021569 | -0.146616761540998 |
| DLPFC | ADediting_674993 | chr17_82389974_- | 3.55047768060626e-08 | 0.306714607225444 | 1.23512008092304e-17 | 0.459958856172787 | 0.148870470805193 | 0.0821803979630335 |
| DLPFC | ADediting_674994 | chr17_82389983_- | 4.67274576950259e-07 | 0.281539326475911 | 6.87886348055464e-14 | 0.408371694854122 | 0.0513035591937603 | 0.110798454004756 |
| DLPFC | ADediting_675097 | chr17_82409703_- | 0.76118334216227 | 0.0173306209090213 | 0.165599926354653 | -0.0789428236078642 | 8.70591702332105e-13 | 0.391339203788651 |
| DLPFC | ADediting_675098 | chr17_82409732_- | 0.137421607907503 | 0.0845589733565821 | 0.524751746572576 | -0.0362591198939022 | 9.06217753947677e-24 | 0.529172196066117 |
| DLPFC | ADediting_675102 | chr17_82409812_- | 0.423309457436188 | 0.0456369633880229 | 0.133122234613784 | -0.0854914673232908 | 1.02999862849656e-15 | 0.434598687616163 |
| DLPFC | ADediting_675122 | chr17_82414357_- | 0.190283547112903 | 0.0745859332339213 | 0.613678515351803 | -0.0287827292104554 | 1.72510710975931e-09 | 0.333519316853235 |
| DLPFC | ADediting_675124 | chr17_82414364_- | 0.128838692469903 | 0.0864438916116014 | 0.705038232645798 | -0.0215836462586486 | 8.69183322235957e-09 | 0.319515393573593 |
| DLPFC | ADediting_675126 | chr17_82414384_- | 0.361796428626173 | 0.0519700659760641 | 0.687762018087703 | -0.0229156226855113 | 1.55922123658264e-13 | 0.402985918580947 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 6.56536471495871e-19 | 0.475688652583969 | 7.97974623180429e-13 | 0.391940145461564 | 1.72183091659605e-49 | 0.713407331929242 |
| AC | 2.7819661972527e-18 | 0.514299042959863 | 3.53506146186729e-10 | 0.38341272644038 | 1.74632140437284e-26 | 0.606295600451571 |
| PCC | 2.88249292660844e-15 | 0.530652590119512 | 9.64096334675385e-10 | 0.424194494238991 | 2.28991761204907e-11 | 0.459487497119853 |
| TCX | 7.62238530043621e-11 | 0.499570492561263 | 0.00774432776984025 | 0.21665802766436 | 5.15089643774356e-07 | 0.396332029523466 |
| FP | 4.34733435697176e-21 | 0.630144427793211 | 3.80850680932839e-07 | 0.36966796616301 | 7.28662863075844e-09 | 0.416604752763267 |
| IFG | 0.000103604419951868 | 0.698332685294085 | 0.00056059562038498 | 0.640644383953323 | 0.179695159061809 | 0.277237094906226 |
| STG | 6.18778367467245e-11 | 0.638872228682044 | 2.59837149569201e-05 | 0.441704480463202 | 0.000428556178551029 | 0.375714305734129 |
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Relation with AD stages for OGFOD3 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| TCX | ADediting_675006 | chr17_82391593_- | 5.18797666534087e-05 | 0.382553948899357 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for OGFOD3 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for OGFOD3 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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