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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for LRRC2 |
 Gene summary |
| Gene information | Gene symbol | LRRC2 | Gene ID | 79442 |
| Gene name | leucine rich repeat containing 2 | |
| Synonyms | - | |
| Cytomap | 3p21.31 | |
| Type of gene | protein-coding | |
| Description | leucine-rich repeat-containing protein 2 | |
| Modification date | 20200313 | |
| UniProtAcc | Q9BYS8, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for LRRC2 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_1065432(46515955, -), ADediting_1065433(46515958, -), ADediting_1065434(46515960, -), ADediting_1065435(46515962, -), ADediting_1065436(46515964, -), ADediting_1065437(46515966, -), ADediting_1065438(46516033, -), ADediting_1065439(46516045, -), ADediting_1065440(46516048, -), ADediting_1065441(46516052, -), ADediting_1065442(46516056, -), ADediting_1065443(46516057, -), ADediting_1065444(46516066, -), ADediting_1065445(46516071, -), ADediting_1065446(46516084, -), ADediting_1065447(46516088, -), ADediting_1065448(46516121, -), ADediting_1065449(46516133, -), ADediting_1065450(46516137, -), ADediting_1065451(46516151, -), ADediting_1065452(46516157, -), ADediting_1065453(46516159, -), ADediting_1065454(46516165, -), ADediting_1065455(46516166, -), ADediting_1065456(46516229, -), ADediting_1065457(46516231, -), ADediting_1065458(46517616, -), ADediting_1065459(46518424, -), ADediting_1065460(46518457, -), ADediting_1065461(46518458, -), ADediting_1065462(46518472, -), ADediting_1065463(46518498, -), ADediting_1065464(46518525, -), ADediting_1065465(46518535, -), ADediting_1065466(46518544, -), ADediting_1065467(46518555, -), ADediting_1065468(46518599, -), ADediting_1065469(46518641, -), ADediting_1065470(46522613, -), ADediting_1065471(46522661, -), ADediting_1065472(46525389, -), ADediting_1065473(46525430, -), ADediting_1065474(46525450, -), ADediting_1065475(46525454, -), ADediting_1065476(46526028, -), ADediting_1065477(46526064, -), ADediting_1065478(46526116, -), ADediting_1065479(46526117, -), ADediting_1065480(46526121, -), ADediting_1065481(46526136, -), ADediting_1065482(46526148, -), ADediting_1065483(46526154, -), ADediting_1065484(46526155, -), ADediting_1065486(46527785, -), ADediting_1065487(46527816, -), ADediting_1065488(46527820, -), ADediting_1065489(46527830, -), ADediting_1065490(46527836, -), ADediting_1065491(46527860, -), ADediting_1065492(46527924, -), ADediting_1065493(46527930, -), ADediting_1065494(46527947, -), ADediting_1065495(46527948, -), ADediting_1065496(46528001, -), ADediting_1065497(46528002, -), ADediting_1065498(46528018, -), ADediting_1065499(46528364, -), ADediting_1065500(46528420, -), ADediting_1065502(46528867, -), ADediting_1065503(46528877, -), ADediting_1065504(46528890, -), ADediting_1065505(46528894, -), ADediting_1065506(46528924, -), ADediting_1065507(46528927, -), ADediting_1065508(46528939, -), ADediting_1065509(46528946, -), ADediting_1065510(46528995, -), ADediting_1065511(46529005, -), ADediting_1065512(46529030, -), ADediting_1065513(46529031, -), ADediting_1065514(46529034, -), ADediting_1065515(46529076, -), ADediting_1065516(46529099, -), ADediting_1065518(46546856, -), ADediting_1065519(46554579, -), ADediting_1574355(46516032, -), ADediting_1574356(46516092, -), ADediting_1574357(46516097, -), ADediting_1574358(46518556, -), ADediting_1574359(46522557, -), ADediting_1574360(46522682, -), ADediting_1574361(46527870, -), ADediting_1574362(46527942, -), ADediting_1647645(46518499, -), |
Top |
RNA editing positional annotations for LRRC2 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1065432 | chr3_46515955_- | UTR3 |
| ADediting_1065433 | chr3_46515958_- | UTR3 |
| ADediting_1065434 | chr3_46515960_- | UTR3 |
| ADediting_1065435 | chr3_46515962_- | UTR3 |
| ADediting_1065436 | chr3_46515964_- | UTR3 |
| ADediting_1065437 | chr3_46515966_- | UTR3 |
| ADediting_1065438 | chr3_46516033_- | UTR3 |
| ADediting_1065439 | chr3_46516045_- | UTR3 |
| ADediting_1065440 | chr3_46516048_- | UTR3 |
| ADediting_1065441 | chr3_46516052_- | UTR3 |
| ADediting_1065442 | chr3_46516056_- | UTR3 |
| ADediting_1065443 | chr3_46516057_- | UTR3 |
| ADediting_1065444 | chr3_46516066_- | UTR3 |
| ADediting_1065445 | chr3_46516071_- | UTR3 |
| ADediting_1065446 | chr3_46516084_- | UTR3 |
| ADediting_1065447 | chr3_46516088_- | UTR3 |
| ADediting_1065448 | chr3_46516121_- | UTR3 |
| ADediting_1065449 | chr3_46516133_- | UTR3 |
| ADediting_1065450 | chr3_46516137_- | UTR3 |
| ADediting_1065451 | chr3_46516151_- | UTR3 |
| ADediting_1065452 | chr3_46516157_- | UTR3 |
| ADediting_1065453 | chr3_46516159_- | UTR3 |
| ADediting_1065454 | chr3_46516165_- | UTR3 |
| ADediting_1065455 | chr3_46516166_- | UTR3 |
| ADediting_1065456 | chr3_46516229_- | UTR3 |
| ADediting_1065457 | chr3_46516231_- | UTR3 |
| ADediting_1065458 | chr3_46517616_- | UTR3 |
| ADediting_1065459 | chr3_46518424_- | UTR3 |
| ADediting_1065460 | chr3_46518457_- | UTR3 |
| ADediting_1065461 | chr3_46518458_- | UTR3 |
| ADediting_1065462 | chr3_46518472_- | UTR3 |
| ADediting_1065463 | chr3_46518498_- | UTR3 |
| ADediting_1065464 | chr3_46518525_- | UTR3 |
| ADediting_1065465 | chr3_46518535_- | UTR3 |
| ADediting_1065466 | chr3_46518544_- | UTR3 |
| ADediting_1065467 | chr3_46518555_- | UTR3 |
| ADediting_1065468 | chr3_46518599_- | UTR3 |
| ADediting_1065469 | chr3_46518641_- | UTR3 |
| ADediting_1065470 | chr3_46522613_- | intronic |
| ADediting_1065471 | chr3_46522661_- | intronic |
| ADediting_1065472 | chr3_46525389_- | intronic |
| ADediting_1065473 | chr3_46525430_- | intronic |
| ADediting_1065474 | chr3_46525450_- | intronic |
| ADediting_1065475 | chr3_46525454_- | intronic |
| ADediting_1065476 | chr3_46526028_- | intronic |
| ADediting_1065477 | chr3_46526064_- | intronic |
| ADediting_1065478 | chr3_46526116_- | intronic |
| ADediting_1065479 | chr3_46526117_- | intronic |
| ADediting_1065480 | chr3_46526121_- | intronic |
| ADediting_1065481 | chr3_46526136_- | intronic |
| ADediting_1065482 | chr3_46526148_- | intronic |
| ADediting_1065483 | chr3_46526154_- | intronic |
| ADediting_1065484 | chr3_46526155_- | intronic |
| ADediting_1065486 | chr3_46527785_- | intronic |
| ADediting_1065487 | chr3_46527816_- | intronic |
| ADediting_1065488 | chr3_46527820_- | intronic |
| ADediting_1065489 | chr3_46527830_- | intronic |
| ADediting_1065490 | chr3_46527836_- | intronic |
| ADediting_1065491 | chr3_46527860_- | intronic |
| ADediting_1065492 | chr3_46527924_- | intronic |
| ADediting_1065493 | chr3_46527930_- | intronic |
| ADediting_1065494 | chr3_46527947_- | intronic |
| ADediting_1065495 | chr3_46527948_- | intronic |
| ADediting_1065496 | chr3_46528001_- | intronic |
| ADediting_1065497 | chr3_46528002_- | intronic |
| ADediting_1065498 | chr3_46528018_- | intronic |
| ADediting_1065499 | chr3_46528364_- | intronic |
| ADediting_1065500 | chr3_46528420_- | intronic |
| ADediting_1065502 | chr3_46528867_- | intronic |
| ADediting_1065503 | chr3_46528877_- | intronic |
| ADediting_1065504 | chr3_46528890_- | intronic |
| ADediting_1065505 | chr3_46528894_- | intronic |
| ADediting_1065506 | chr3_46528924_- | intronic |
| ADediting_1065507 | chr3_46528927_- | intronic |
| ADediting_1065508 | chr3_46528939_- | intronic |
| ADediting_1065509 | chr3_46528946_- | intronic |
| ADediting_1065510 | chr3_46528995_- | intronic |
| ADediting_1065511 | chr3_46529005_- | intronic |
| ADediting_1065512 | chr3_46529030_- | intronic |
| ADediting_1065513 | chr3_46529031_- | intronic |
| ADediting_1065514 | chr3_46529034_- | intronic |
| ADediting_1065515 | chr3_46529076_- | intronic |
| ADediting_1065516 | chr3_46529099_- | intronic |
| ADediting_1065518 | chr3_46546856_- | intronic |
| ADediting_1065519 | chr3_46554579_- | intronic |
| ADediting_1574355 | chr3_46516032_- | UTR3 |
| ADediting_1574356 | chr3_46516092_- | UTR3 |
| ADediting_1574357 | chr3_46516097_- | UTR3 |
| ADediting_1574358 | chr3_46518556_- | UTR3 |
| ADediting_1574359 | chr3_46522557_- | intronic |
| ADediting_1574360 | chr3_46522682_- | intronic |
| ADediting_1574361 | chr3_46527870_- | intronic |
| ADediting_1574362 | chr3_46527942_- | intronic |
| ADediting_1647645 | chr3_46518499_- | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1065432 | chr3_46515955_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065433 | chr3_46515958_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065434 | chr3_46515960_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065435 | chr3_46515962_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065436 | chr3_46515964_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065437 | chr3_46515966_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065438 | chr3_46516033_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065439 | chr3_46516045_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065440 | chr3_46516048_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065441 | chr3_46516052_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065442 | chr3_46516056_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065443 | chr3_46516057_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065444 | chr3_46516066_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065445 | chr3_46516071_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065446 | chr3_46516084_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065447 | chr3_46516088_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065448 | chr3_46516121_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065449 | chr3_46516133_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065450 | chr3_46516137_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065451 | chr3_46516151_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065452 | chr3_46516157_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065453 | chr3_46516159_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065454 | chr3_46516165_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065455 | chr3_46516166_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065456 | chr3_46516229_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065457 | chr3_46516231_- | SINE | Alu | Name=AluSx3 |
| ADediting_1065458 | chr3_46517616_- | SINE | Alu | Name=AluJb |
| ADediting_1065459 | chr3_46518424_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065460 | chr3_46518457_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065461 | chr3_46518458_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065462 | chr3_46518472_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065463 | chr3_46518498_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065464 | chr3_46518525_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065465 | chr3_46518535_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065466 | chr3_46518544_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065467 | chr3_46518555_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065468 | chr3_46518599_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065469 | chr3_46518641_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065470 | chr3_46522613_- | SINE | Alu | Name=AluJr |
| ADediting_1065471 | chr3_46522661_- | SINE | Alu | Name=AluJr |
| ADediting_1065472 | chr3_46525389_- | SINE | Alu | Name=AluJr4 |
| ADediting_1065473 | chr3_46525430_- | SINE | Alu | Name=AluJr4 |
| ADediting_1065474 | chr3_46525450_- | SINE | Alu | Name=AluJr4 |
| ADediting_1065475 | chr3_46525454_- | SINE | Alu | Name=AluJr4 |
| ADediting_1065476 | chr3_46526028_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065477 | chr3_46526064_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065478 | chr3_46526116_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065479 | chr3_46526117_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065480 | chr3_46526121_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065481 | chr3_46526136_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065482 | chr3_46526148_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065483 | chr3_46526154_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065484 | chr3_46526155_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065486 | chr3_46527785_- | SINE | Alu | Name=AluJb |
| ADediting_1065487 | chr3_46527816_- | SINE | Alu | Name=AluJb |
| ADediting_1065488 | chr3_46527820_- | SINE | Alu | Name=AluJb |
| ADediting_1065489 | chr3_46527830_- | SINE | Alu | Name=AluJb |
| ADediting_1065490 | chr3_46527836_- | SINE | Alu | Name=AluJb |
| ADediting_1065491 | chr3_46527860_- | SINE | Alu | Name=AluJb |
| ADediting_1065492 | chr3_46527924_- | SINE | Alu | Name=AluJb |
| ADediting_1065493 | chr3_46527930_- | SINE | Alu | Name=AluJb |
| ADediting_1065494 | chr3_46527947_- | SINE | Alu | Name=AluJb |
| ADediting_1065495 | chr3_46527948_- | SINE | Alu | Name=AluJb |
| ADediting_1065496 | chr3_46528001_- | SINE | Alu | Name=AluJb |
| ADediting_1065497 | chr3_46528002_- | SINE | Alu | Name=AluJb |
| ADediting_1065498 | chr3_46528018_- | SINE | Alu | Name=AluJb |
| ADediting_1065499 | chr3_46528364_- | SINE | Alu | Name=FLAM_C |
| ADediting_1065500 | chr3_46528420_- | SINE | Alu | Name=FLAM_C |
| ADediting_1065502 | chr3_46528867_- | SINE | Alu | Name=AluJr |
| ADediting_1065503 | chr3_46528877_- | SINE | Alu | Name=AluJr |
| ADediting_1065504 | chr3_46528890_- | SINE | Alu | Name=AluJr |
| ADediting_1065505 | chr3_46528894_- | SINE | Alu | Name=AluJr |
| ADediting_1065506 | chr3_46528924_- | SINE | Alu | Name=AluJr |
| ADediting_1065507 | chr3_46528927_- | SINE | Alu | Name=AluJr |
| ADediting_1065508 | chr3_46528939_- | SINE | Alu | Name=AluJr |
| ADediting_1065509 | chr3_46528946_- | SINE | Alu | Name=AluJr |
| ADediting_1065510 | chr3_46528995_- | SINE | Alu | Name=AluJr |
| ADediting_1065511 | chr3_46529005_- | SINE | Alu | Name=AluJr |
| ADediting_1065512 | chr3_46529030_- | SINE | Alu | Name=AluJr |
| ADediting_1065513 | chr3_46529031_- | SINE | Alu | Name=AluJr |
| ADediting_1065514 | chr3_46529034_- | SINE | Alu | Name=AluJr |
| ADediting_1065515 | chr3_46529076_- | SINE | Alu | Name=AluJr |
| ADediting_1065516 | chr3_46529099_- | SINE | Alu | Name=AluJr |
| ADediting_1065518 | chr3_46546856_- | SINE | Alu | Name=AluSx1 |
| ADediting_1065519 | chr3_46554579_- | SINE | Alu | Name=AluSx4 |
| ADediting_1574355 | chr3_46516032_- | SINE | Alu | Name=AluSx3 |
| ADediting_1574356 | chr3_46516092_- | SINE | Alu | Name=AluSx3 |
| ADediting_1574357 | chr3_46516097_- | SINE | Alu | Name=AluSx3 |
| ADediting_1574358 | chr3_46518556_- | SINE | Alu | Name=AluSx1 |
| ADediting_1574359 | chr3_46522557_- | SINE | Alu | Name=AluJr |
| ADediting_1574360 | chr3_46522682_- | SINE | Alu | Name=AluJr |
| ADediting_1574361 | chr3_46527870_- | SINE | Alu | Name=AluJb |
| ADediting_1574362 | chr3_46527942_- | SINE | Alu | Name=AluJb |
| ADediting_1647645 | chr3_46518499_- | SINE | Alu | Name=AluSx1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for LRRC2 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for LRRC2 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
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| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for LRRC2 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for LRRC2 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1065438 | chr3_46516033_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-1304-3p | chr3 | 46516031 | 46516037 | 7mer-m8 | 46516030 | 46516051 | 167 | -27.5 |
| ADediting_1065440 | chr3_46516048_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-5001-3p | chr3 | 46516043 | 46516049 | 7mer-m8 | 46516042 | 46516066 | 153 | -21.28 |
| ADediting_1065440 | chr3_46516048_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-660-3p | chr3 | 46516047 | 46516053 | 7mer-m8 | 46516046 | 46516066 | 158 | -17.09 |
| ADediting_1065440 | chr3_46516048_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6791-3p | chr3 | 46516045 | 46516052 | 8mer-1a | 46516045 | 46516064 | 161 | -26.76 |
| ADediting_1065440 | chr3_46516048_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6829-3p | chr3 | 46516045 | 46516052 | 8mer-1a | 46516045 | 46516064 | 144 | -18.51 |
| ADediting_1065440 | chr3_46516048_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6836-3p | chr3 | 46516045 | 46516051 | 7mer-m8 | 46516044 | 46516064 | 140 | -17.31 |
| ADediting_1065442 | chr3_46516056_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-10400-3p | chr3 | 46516052 | 46516058 | 7mer-m8 | 46516051 | 46516072 | 141 | -22.13 |
| ADediting_1065442 | chr3_46516056_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-4437 | chr3 | 46516052 | 46516059 | 8mer-1a | 46516052 | 46516072 | 146 | -19.59 |
| ADediting_1065442 | chr3_46516056_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-4674 | chr3 | 46516052 | 46516058 | 7mer-m8 | 46516051 | 46516071 | 147 | -23.48 |
| ADediting_1065444 | chr3_46516066_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-660-3p | chr3 | 46516065 | 46516072 | 8mer-1a | 46516065 | 46516084 | 144 | -16.11 |
| ADediting_1065447 | chr3_46516088_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-1207-3p | chr3 | 46516088 | 46516094 | 7mer-m8 | 46516087 | 46516104 | 140 | -12.56 |
| ADediting_1065447 | chr3_46516088_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-646 | chr3 | 46516086 | 46516092 | 7mer-m8 | 46516085 | 46516103 | 145 | -15.36 |
| ADediting_1065449 | chr3_46516133_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-4325 | chr3 | 46516128 | 46516135 | 8mer-1a | 46516128 | 46516145 | 143 | -11.61 |
| ADediting_1065451 | chr3_46516151_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-3158-3p | chr3 | 46516147 | 46516153 | 7mer-m8 | 46516146 | 46516166 | 150 | -16.48 |
| ADediting_1065451 | chr3_46516151_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6837-3p | chr3 | 46516151 | 46516157 | 7mer-m8 | 46516150 | 46516172 | 151 | -17.11 |
| ADediting_1065452 | chr3_46516157_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-4716-5p | chr3 | 46516156 | 46516162 | 7mer-m8 | 46516155 | 46516176 | 140 | -9.16 |
| ADediting_1065454 | chr3_46516165_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-645 | chr3 | 46516164 | 46516171 | 8mer-1a | 46516164 | 46516181 | 156 | -24.28 |
| ADediting_1065454 | chr3_46516165_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-8078 | chr3 | 46516162 | 46516169 | 8mer-1a | 46516162 | 46516183 | 148 | -23.16 |
| ADediting_1065456 | chr3_46516229_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-638 | chr3 | 46516223 | 46516229 | 7mer-1a | 46516223 | 46516247 | 151 | -30 |
| ADediting_1065457 | chr3_46516231_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-10399-5p | chr3 | 46516227 | 46516233 | 7mer-m8 | 46516226 | 46516247 | 148 | -11.17 |
| ADediting_1065457 | chr3_46516231_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6504-3p | chr3 | 46516227 | 46516233 | 7mer-m8 | 46516226 | 46516245 | 140 | -7.64 |
| ADediting_1065457 | chr3_46516231_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-7151-3p | chr3 | 46516228 | 46516235 | 8mer-1a | 46516228 | 46516248 | 146 | -14.97 |
| ADediting_1065458 | chr3_46517616_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-10399-5p | chr3 | 46517612 | 46517618 | 7mer-m8 | 46517611 | 46517632 | 148 | -11.21 |
| ADediting_1065458 | chr3_46517616_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-3934-5p | chr3 | 46517616 | 46517622 | 7mer-m8 | 46517615 | 46517637 | 155 | -24.94 |
| ADediting_1065458 | chr3_46517616_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-552-3p | chr3 | 46517614 | 46517621 | 8mer-1a | 46517614 | 46517634 | 140 | -13.45 |
| ADediting_1065458 | chr3_46517616_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6504-3p | chr3 | 46517612 | 46517618 | 7mer-m8 | 46517611 | 46517632 | 145 | -14.35 |
| ADediting_1065460 | chr3_46518457_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-3155a | chr3 | 46518453 | 46518459 | 7mer-m8 | 46518452 | 46518473 | 141 | -23.88 |
| ADediting_1065460 | chr3_46518457_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-3155b | chr3 | 46518453 | 46518459 | 7mer-m8 | 46518452 | 46518470 | 141 | -22.98 |
| ADediting_1065460 | chr3_46518457_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-484 | chr3 | 46518453 | 46518459 | 7mer-m8 | 46518452 | 46518473 | 151 | -23.09 |
| ADediting_1065460 | chr3_46518457_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-3155a | chr3 | 46518453 | 46518459 | 7mer-m8 | 46518452 | 46518473 | 141 | -23.88 |
| ADediting_1065460 | chr3_46518457_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-3155b | chr3 | 46518453 | 46518459 | 7mer-m8 | 46518452 | 46518470 | 141 | -22.98 |
| ADediting_1065460 | chr3_46518457_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-484 | chr3 | 46518453 | 46518459 | 7mer-m8 | 46518452 | 46518473 | 151 | -23.09 |
| ADediting_1065461 | chr3_46518458_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-9900 | chr3 | 46518453 | 46518459 | 7mer-m8 | 46518452 | 46518471 | 155 | -17.58 |
| ADediting_1065461 | chr3_46518458_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-9900 | chr3 | 46518453 | 46518459 | 7mer-m8 | 46518452 | 46518471 | 155 | -17.58 |
| ADediting_1065463 | chr3_46518498_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-3117-3p | chr3 | 46518493 | 46518499 | 7mer-m8 | 46518492 | 46518514 | 153 | -19.99 |
| ADediting_1065463 | chr3_46518498_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-4759 | chr3 | 46518493 | 46518500 | 8mer-1a | 46518493 | 46518513 | 145 | -15.05 |
| ADediting_1065463 | chr3_46518498_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-3117-3p | chr3 | 46518493 | 46518499 | 7mer-m8 | 46518492 | 46518514 | 153 | -19.99 |
| ADediting_1065463 | chr3_46518498_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-4759 | chr3 | 46518493 | 46518500 | 8mer-1a | 46518493 | 46518513 | 145 | -15.05 |
| ADediting_1065465 | chr3_46518535_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-153-5p | chr3 | 46518535 | 46518541 | 7mer-m8 | 46518534 | 46518556 | 148 | -8.16 |
| ADediting_1065465 | chr3_46518535_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-3680-3p | chr3 | 46518530 | 46518537 | 8mer-1a | 46518530 | 46518552 | 140 | -14.24 |
| ADediting_1065465 | chr3_46518535_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-153-5p | chr3 | 46518535 | 46518541 | 7mer-m8 | 46518534 | 46518556 | 148 | -8.16 |
| ADediting_1065465 | chr3_46518535_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-3680-3p | chr3 | 46518530 | 46518537 | 8mer-1a | 46518530 | 46518552 | 140 | -14.24 |
| ADediting_1065466 | chr3_46518544_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-374b-3p | chr3 | 46518539 | 46518546 | 8mer-1a | 46518539 | 46518561 | 146 | -9.57 |
| ADediting_1065466 | chr3_46518544_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-4756-3p | chr3 | 46518544 | 46518550 | 7mer-m8 | 46518543 | 46518568 | 159 | -21.63 |
| ADediting_1065466 | chr3_46518544_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-374b-3p | chr3 | 46518539 | 46518546 | 8mer-1a | 46518539 | 46518561 | 146 | -9.57 |
| ADediting_1065466 | chr3_46518544_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-4756-3p | chr3 | 46518544 | 46518550 | 7mer-m8 | 46518543 | 46518568 | 159 | -21.63 |
| ADediting_1574355 | chr3_46516032_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-24-1-5p | chr3 | 46516030 | 46516036 | 7mer-m8 | 46516029 | 46516051 | 148 | -18.75 |
| ADediting_1574355 | chr3_46516032_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-24-2-5p | chr3 | 46516030 | 46516036 | 7mer-m8 | 46516029 | 46516051 | 148 | -18.27 |
| ADediting_1647645 | chr3_46518499_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-513a-5p | chr3 | 46518498 | 46518504 | 7mer-m8 | 46518497 | 46518514 | 156 | -22.21 |
| ADediting_1647645 | chr3_46518499_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-513a-5p | chr3 | 46518498 | 46518504 | 7mer-m8 | 46518497 | 46518514 | 156 | -22.21 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1065432 | chr3_46515955_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-130a-5p | chr3 | 46515949 | 46515956 | 8mer-1a | 46515949 | 46515970 | 140 | -7.11 |
| ADediting_1065439 | chr3_46516045_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6728-3p | chr3 | 46516042 | 46516048 | 7mer-m8 | 46516041 | 46516063 | 143 | -15.88 |
| ADediting_1065440 | chr3_46516048_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-516a-3p | chr3 | 46516045 | 46516052 | 8mer-1a | 46516045 | 46516065 | 144 | -17.08 |
| ADediting_1065440 | chr3_46516048_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-516b-3p | chr3 | 46516045 | 46516052 | 8mer-1a | 46516045 | 46516065 | 144 | -17.08 |
| ADediting_1065440 | chr3_46516048_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-7162-5p | chr3 | 46516045 | 46516052 | 8mer-1a | 46516045 | 46516064 | 141 | -15.47 |
| ADediting_1065441 | chr3_46516052_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-1343-3p | chr3 | 46516048 | 46516055 | 8mer-1a | 46516048 | 46516071 | 150 | -20.85 |
| ADediting_1065441 | chr3_46516052_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6742-3p | chr3 | 46516049 | 46516056 | 8mer-1a | 46516049 | 46516068 | 145 | -14.93 |
| ADediting_1065441 | chr3_46516052_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6783-3p | chr3 | 46516048 | 46516055 | 8mer-1a | 46516048 | 46516068 | 146 | -18.3 |
| ADediting_1065442 | chr3_46516056_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-498-5p | chr3 | 46516056 | 46516062 | 7mer-m8 | 46516055 | 46516077 | 142 | -10.65 |
| ADediting_1065443 | chr3_46516057_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-498-5p | chr3 | 46516056 | 46516062 | 7mer-m8 | 46516055 | 46516077 | 142 | -10.65 |
| ADediting_1065444 | chr3_46516066_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-5571-5p | chr3 | 46516063 | 46516069 | 7mer-m8 | 46516062 | 46516084 | 142 | -24.8 |
| ADediting_1065445 | chr3_46516071_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-1976 | chr3 | 46516066 | 46516073 | 8mer-1a | 46516066 | 46516086 | 153 | -25.04 |
| ADediting_1065445 | chr3_46516071_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6747-3p | chr3 | 46516068 | 46516075 | 8mer-1a | 46516068 | 46516090 | 149 | -23.42 |
| ADediting_1065446 | chr3_46516084_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-1200 | chr3 | 46516081 | 46516087 | 7mer-m8 | 46516080 | 46516101 | 141 | -17.86 |
| ADediting_1065446 | chr3_46516084_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6869-5p | chr3 | 46516084 | 46516090 | 7mer-m8 | 46516083 | 46516106 | 148 | -20.31 |
| ADediting_1065447 | chr3_46516088_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6869-5p | chr3 | 46516084 | 46516090 | 7mer-m8 | 46516083 | 46516106 | 148 | -20.31 |
| ADediting_1065448 | chr3_46516121_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-4735-5p | chr3 | 46516120 | 46516126 | 7mer-m8 | 46516119 | 46516140 | 140 | -4.28 |
| ADediting_1065449 | chr3_46516133_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-153-5p | chr3 | 46516131 | 46516137 | 7mer-m8 | 46516130 | 46516150 | 146 | -10.1 |
| ADediting_1065451 | chr3_46516151_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6823-5p | chr3 | 46516146 | 46516152 | 7mer-m8 | 46516145 | 46516165 | 143 | -18.06 |
| ADediting_1065460 | chr3_46518457_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-498-5p | chr3 | 46518457 | 46518463 | 7mer-m8 | 46518456 | 46518478 | 142 | -9.71 |
| ADediting_1065460 | chr3_46518457_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-498-5p | chr3 | 46518457 | 46518463 | 7mer-m8 | 46518456 | 46518478 | 142 | -9.71 |
| ADediting_1065461 | chr3_46518458_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-498-5p | chr3 | 46518457 | 46518463 | 7mer-m8 | 46518456 | 46518478 | 142 | -9.71 |
| ADediting_1065461 | chr3_46518458_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-498-5p | chr3 | 46518457 | 46518463 | 7mer-m8 | 46518456 | 46518478 | 142 | -9.71 |
| ADediting_1065462 | chr3_46518472_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-1976 | chr3 | 46518467 | 46518474 | 8mer-1a | 46518467 | 46518487 | 153 | -25.04 |
| ADediting_1065462 | chr3_46518472_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-6747-3p | chr3 | 46518469 | 46518476 | 8mer-1a | 46518469 | 46518491 | 149 | -23.42 |
| ADediting_1065462 | chr3_46518472_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-1976 | chr3 | 46518467 | 46518474 | 8mer-1a | 46518467 | 46518487 | 153 | -25.04 |
| ADediting_1065462 | chr3_46518472_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6747-3p | chr3 | 46518469 | 46518476 | 8mer-1a | 46518469 | 46518491 | 149 | -23.42 |
| ADediting_1065463 | chr3_46518498_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-10399-5p | chr3 | 46518497 | 46518503 | 7mer-m8 | 46518496 | 46518519 | 147 | -14.34 |
| ADediting_1065463 | chr3_46518498_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-10399-5p | chr3 | 46518497 | 46518503 | 7mer-m8 | 46518496 | 46518519 | 147 | -14.34 |
| ADediting_1065464 | chr3_46518525_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-4735-5p | chr3 | 46518524 | 46518530 | 7mer-m8 | 46518523 | 46518544 | 140 | -4.28 |
| ADediting_1065464 | chr3_46518525_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-4735-5p | chr3 | 46518524 | 46518530 | 7mer-m8 | 46518523 | 46518544 | 140 | -4.28 |
| ADediting_1065466 | chr3_46518544_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-6832-5p | chr3 | 46518543 | 46518549 | 7mer-m8 | 46518542 | 46518564 | 142 | -15.43 |
| ADediting_1065466 | chr3_46518544_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6832-5p | chr3 | 46518543 | 46518549 | 7mer-m8 | 46518542 | 46518564 | 142 | -15.43 |
| ADediting_1065467 | chr3_46518555_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-193b-5p | chr3 | 46518550 | 46518557 | 8mer-1a | 46518550 | 46518571 | 146 | -18.7 |
| ADediting_1065467 | chr3_46518555_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-3170 | chr3 | 46518550 | 46518556 | 7mer-m8 | 46518549 | 46518570 | 143 | -15.88 |
| ADediting_1065467 | chr3_46518555_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-6855-5p | chr3 | 46518550 | 46518556 | 7mer-m8 | 46518549 | 46518574 | 155 | -19.83 |
| ADediting_1065467 | chr3_46518555_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-193b-5p | chr3 | 46518550 | 46518557 | 8mer-1a | 46518550 | 46518571 | 146 | -18.7 |
| ADediting_1065467 | chr3_46518555_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-3170 | chr3 | 46518550 | 46518556 | 7mer-m8 | 46518549 | 46518570 | 143 | -15.88 |
| ADediting_1065467 | chr3_46518555_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6855-5p | chr3 | 46518550 | 46518556 | 7mer-m8 | 46518549 | 46518574 | 155 | -19.83 |
| ADediting_1065468 | chr3_46518599_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-125a-3p | chr3 | 46518594 | 46518601 | 8mer-1a | 46518594 | 46518615 | 140 | -17.58 |
| ADediting_1065468 | chr3_46518599_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-640 | chr3 | 46518599 | 46518605 | 7mer-m8 | 46518598 | 46518620 | 150 | -18.79 |
| ADediting_1065468 | chr3_46518599_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-125a-3p | chr3 | 46518594 | 46518601 | 8mer-1a | 46518594 | 46518615 | 140 | -17.58 |
| ADediting_1065468 | chr3_46518599_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-640 | chr3 | 46518599 | 46518605 | 7mer-m8 | 46518598 | 46518620 | 150 | -18.79 |
| ADediting_1065469 | chr3_46518641_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-3934-5p | chr3 | 46518637 | 46518643 | 7mer-m8 | 46518636 | 46518658 | 147 | -20.32 |
| ADediting_1065469 | chr3_46518641_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-552-3p | chr3 | 46518635 | 46518642 | 8mer-1a | 46518635 | 46518657 | 142 | -14.51 |
| ADediting_1065469 | chr3_46518641_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-3934-5p | chr3 | 46518637 | 46518643 | 7mer-m8 | 46518636 | 46518658 | 147 | -20.32 |
| ADediting_1065469 | chr3_46518641_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-552-3p | chr3 | 46518635 | 46518642 | 8mer-1a | 46518635 | 46518657 | 142 | -14.51 |
| ADediting_1574356 | chr3_46516092_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-5089-5p | chr3 | 46516092 | 46516098 | 7mer-m8 | 46516091 | 46516109 | 146 | -14.2 |
| ADediting_1574356 | chr3_46516092_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-6506-5p | chr3 | 46516091 | 46516097 | 7mer-m8 | 46516090 | 46516112 | 140 | -15.98 |
| ADediting_1574357 | chr3_46516097_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-5089-5p | chr3 | 46516092 | 46516098 | 7mer-m8 | 46516091 | 46516109 | 146 | -14.2 |
| ADediting_1574358 | chr3_46518556_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-193b-5p | chr3 | 46518550 | 46518557 | 8mer-1a | 46518550 | 46518571 | 146 | -18.7 |
| ADediting_1574358 | chr3_46518556_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-193b-5p | chr3 | 46518550 | 46518557 | 8mer-1a | 46518550 | 46518571 | 146 | -18.7 |
| ADediting_1647645 | chr3_46518499_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-10399-5p | chr3 | 46518497 | 46518503 | 7mer-m8 | 46518496 | 46518519 | 147 | -14.34 |
| ADediting_1647645 | chr3_46518499_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-7151-3p | chr3 | 46518498 | 46518505 | 8mer-1a | 46518498 | 46518518 | 140 | -12.04 |
| ADediting_1647645 | chr3_46518499_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-10399-5p | chr3 | 46518497 | 46518503 | 7mer-m8 | 46518496 | 46518519 | 147 | -14.34 |
| ADediting_1647645 | chr3_46518499_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-7151-3p | chr3 | 46518498 | 46518505 | 8mer-1a | 46518498 | 46518518 | 140 | -12.04 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1391023 | chr8_140732605_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-151a-3p | chr3 | 46516914 | 46516921 | 8mer-1a | 46516914 | 46516933 | 156 | -21.86 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-151a-3p | chr3 | 46517910 | 46517916 | 7mer-m8 | 46517909 | 46517931 | 150 | -18.16 |
| ADediting_291761 | chr11_93733708_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-1304-3p | chr3 | 46516816 | 46516822 | 7mer-m8 | 46516815 | 46516836 | 141 | -19.57 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-4775 | chr3 | 46515705 | 46515711 | 7mer-m8 | 46515704 | 46515725 | 142 | -5.83 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-4775 | chr3 | 46517427 | 46517433 | 7mer-m8 | 46517426 | 46517448 | 158 | -17.24 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-589-3p | chr3 | 46517154 | 46517160 | 7mer-m8 | 46517153 | 46517175 | 145 | -17.76 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-641 | chr3 | 46518735 | 46518742 | 8mer-1a | 46518735 | 46518761 | 147 | -9.97 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-641 | chr3 | 46518735 | 46518742 | 8mer-1a | 46518735 | 46518761 | 147 | -9.97 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000163827.13 | ENST00000296144.3 | LRRC2-201 | hsa-miR-641 | chr3 | 46518735 | 46518742 | 8mer-1a | 46518735 | 46518761 | 147 | -9.97 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-641 | chr3 | 46518735 | 46518742 | 8mer-1a | 46518735 | 46518761 | 147 | -9.97 |
| ADediting_291761 | chr11_93733708_- | ENSG00000163827.13 | ENST00000395905.8 | LRRC2-202 | hsa-miR-1304-3p | chr3 | 46516851 | 46516858 | 8mer-1a | 46516851 | 46516871 | 144 | -18.28 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for LRRC2 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000395905.8 | protein_coding |  |  |
| ENST00000296144.3 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1065432 | ENST00000395905.8 | chr3_46515955_- | 4320 | -1460.00 | -1459.60 | -1509.60 |
| ADediting_1065433 | ENST00000395905.8 | chr3_46515958_- | 4317 | -1459.60 | -1459.60 | -1509.60 |
| ADediting_1065434 | ENST00000395905.8 | chr3_46515960_- | 4315 | -1459.60 | -1459.60 | -1509.60 |
| ADediting_1065435 | ENST00000395905.8 | chr3_46515962_- | 4313 | -1459.60 | -1459.60 | -1509.60 |
| ADediting_1065436 | ENST00000395905.8 | chr3_46515964_- | 4311 | -1459.60 | -1459.60 | -1509.60 |
| ADediting_1065437 | ENST00000395905.8 | chr3_46515966_- | 4309 | -1459.60 | -1459.60 | -1509.60 |
| ADediting_1574355 | ENST00000395905.8 | chr3_46516032_- | 4243 | -1459.70 | -1459.60 | -1509.60 |
| ADediting_1065438 | ENST00000395905.8 | chr3_46516033_- | 4242 | -1461.30 | -1459.60 | -1509.60 |
| ADediting_1065439 | ENST00000395905.8 | chr3_46516045_- | 4230 | -1458.80 | -1459.60 | -1509.60 |
| ADediting_1065440 | ENST00000395905.8 | chr3_46516048_- | 4227 | -1459.80 | -1459.60 | -1509.60 |
| ADediting_1065441 | ENST00000395905.8 | chr3_46516052_- | 4223 | -1459.60 | -1459.60 | -1509.60 |
| ADediting_1065442 | ENST00000395905.8 | chr3_46516056_- | 4219 | -1463.60 | -1459.60 | -1509.60 |
| ADediting_1065443 | ENST00000395905.8 | chr3_46516057_- | 4218 | -1459.60 | -1459.60 | -1509.60 |
| ADediting_1065444 | ENST00000395905.8 | chr3_46516066_- | 4209 | -1460.10 | -1459.60 | -1509.60 |
| ADediting_1065445 | ENST00000395905.8 | chr3_46516071_- | 4204 | -1462.00 | -1459.60 | -1509.60 |
| ADediting_1065446 | ENST00000395905.8 | chr3_46516084_- | 4191 | -1458.90 | -1459.60 | -1509.60 |
| ADediting_1065447 | ENST00000395905.8 | chr3_46516088_- | 4187 | -1460.60 | -1459.60 | -1509.60 |
| ADediting_1574356 | ENST00000395905.8 | chr3_46516092_- | 4183 | -1461.50 | -1459.60 | -1509.60 |
| ADediting_1574357 | ENST00000395905.8 | chr3_46516097_- | 4178 | -1463.40 | -1459.60 | -1509.60 |
| ADediting_1065448 | ENST00000395905.8 | chr3_46516121_- | 4154 | -1459.30 | -1459.60 | -1509.60 |
| ADediting_1065449 | ENST00000395905.8 | chr3_46516133_- | 4142 | -1459.30 | -1459.60 | -1509.60 |
| ADediting_1065450 | ENST00000395905.8 | chr3_46516137_- | 4138 | -1458.80 | -1459.60 | -1509.60 |
| ADediting_1065451 | ENST00000395905.8 | chr3_46516151_- | 4124 | -1460.80 | -1459.60 | -1509.60 |
| ADediting_1065452 | ENST00000395905.8 | chr3_46516157_- | 4118 | -1464.70 | -1459.60 | -1509.60 |
| ADediting_1065453 | ENST00000395905.8 | chr3_46516159_- | 4116 | -1459.60 | -1459.60 | -1509.60 |
| ADediting_1065454 | ENST00000395905.8 | chr3_46516165_- | 4110 | -1463.60 | -1459.60 | -1509.60 |
| ADediting_1065455 | ENST00000395905.8 | chr3_46516166_- | 4109 | -1463.60 | -1459.60 | -1509.60 |
| ADediting_1065456 | ENST00000395905.8 | chr3_46516229_- | 4046 | -1459.60 | -1459.60 | -1509.60 |
| ADediting_1065457 | ENST00000395905.8 | chr3_46516231_- | 4044 | -1459.60 | -1459.60 | -1509.60 |
| ADediting_1065458 | ENST00000395905.8 | chr3_46517616_- | 2659 | -1462.40 | -1459.60 | -1509.60 |
| ADediting_1065459 | ENST00000395905.8 | chr3_46518424_- | 1851 | -1463.00 | -1459.60 | -1509.60 |
| ADediting_1065460 | ENST00000395905.8 | chr3_46518457_- | 1818 | -1459.60 | -1459.60 | -1509.60 |
| ADediting_1065461 | ENST00000395905.8 | chr3_46518458_- | 1817 | -1460.80 | -1459.60 | -1509.60 |
| ADediting_1065462 | ENST00000395905.8 | chr3_46518472_- | 1803 | -1462.20 | -1459.60 | -1509.60 |
| ADediting_1065463 | ENST00000395905.8 | chr3_46518498_- | 1777 | -1459.90 | -1459.60 | -1509.60 |
| ADediting_1647645 | ENST00000395905.8 | chr3_46518499_- | 1776 | -1459.90 | -1459.60 | -1509.60 |
| ADediting_1065464 | ENST00000395905.8 | chr3_46518525_- | 1750 | -1459.30 | -1459.60 | -1509.60 |
| ADediting_1065465 | ENST00000395905.8 | chr3_46518535_- | 1740 | -1461.70 | -1459.60 | -1509.60 |
| ADediting_1065466 | ENST00000395905.8 | chr3_46518544_- | 1731 | -1461.30 | -1459.60 | -1509.60 |
| ADediting_1065467 | ENST00000395905.8 | chr3_46518555_- | 1720 | -1460.70 | -1459.60 | -1509.60 |
| ADediting_1574358 | ENST00000395905.8 | chr3_46518556_- | 1719 | -1459.70 | -1459.60 | -1509.60 |
| ADediting_1065468 | ENST00000395905.8 | chr3_46518599_- | 1676 | -1460.40 | -1459.60 | -1509.60 |
| ADediting_1065469 | ENST00000395905.8 | chr3_46518641_- | 1634 | -1459.20 | -1459.60 | -1509.60 |
| ADediting_1065459 | ENST00000296144.3 | chr3_46518424_- | 1888 | -557.70 | -554.30 | -570.70 |
| ADediting_1065460 | ENST00000296144.3 | chr3_46518457_- | 1855 | -559.30 | -554.30 | -570.70 |
| ADediting_1065461 | ENST00000296144.3 | chr3_46518458_- | 1854 | -554.30 | -554.30 | -570.70 |
| ADediting_1065462 | ENST00000296144.3 | chr3_46518472_- | 1840 | -556.70 | -554.30 | -570.70 |
| ADediting_1065463 | ENST00000296144.3 | chr3_46518498_- | 1814 | -554.80 | -554.30 | -570.70 |
| ADediting_1647645 | ENST00000296144.3 | chr3_46518499_- | 1813 | -555.30 | -554.30 | -570.70 |
| ADediting_1065464 | ENST00000296144.3 | chr3_46518525_- | 1787 | -555.00 | -554.30 | -570.70 |
| ADediting_1065465 | ENST00000296144.3 | chr3_46518535_- | 1777 | -555.70 | -554.30 | -570.70 |
| ADediting_1065466 | ENST00000296144.3 | chr3_46518544_- | 1768 | -555.30 | -554.30 | -570.70 |
| ADediting_1065467 | ENST00000296144.3 | chr3_46518555_- | 1757 | -554.70 | -554.30 | -570.70 |
| ADediting_1574358 | ENST00000296144.3 | chr3_46518556_- | 1756 | -554.40 | -554.30 | -570.70 |
| ADediting_1065468 | ENST00000296144.3 | chr3_46518599_- | 1713 | -555.10 | -554.30 | -570.70 |
| ADediting_1065469 | ENST00000296144.3 | chr3_46518641_- | 1671 | -553.90 | -554.30 | -570.70 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for LRRC2 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| TCX | ADediting_1065452 | chr3_46516157_- | 0.0011251504640971 | 0.263439550784298 | 9.20616858144157e-05 | 0.31382101070904 | 0.183591988903574 | 0.109164208381575 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 3.02871432864917e-31 | 0.59638648779421 | 4.20337201763111e-36 | 0.63292028901199 | 1.34096114539582e-05 | 0.244477069916227 |
| AC | 1.74568221727607e-17 | 0.503638106557542 | 2.89670154067801e-12 | 0.422851267166408 | 0.0314293719961884 | 0.136126880268174 |
| PCC | 3.75540688470437e-44 | 0.801928316310627 | 4.18209576832199e-42 | 0.790502585853518 | 0.492399967599167 | 0.0499701297735452 |
| CER | 3.07259380706019e-16 | 0.60330669245866 | 1.16137735168014e-07 | 0.416370638054148 | 0.0534903091827428 | 0.157990705887493 |
| TCX | 1.3576144008757e-18 | 0.639115192276139 | 1.13761237630948e-25 | 0.724292356894026 | 0.000666548804094215 | -0.274782654973596 |
| FP | 1.58968295857514e-12 | 0.497608792877355 | 9.07248177313128e-24 | 0.661526755469632 | 0.115641766766112 | -0.11834525607401 |
| IFG | 0.0132566206525183 | 0.488346422880584 | 0.0324363302268819 | 0.428836770298455 | 0.606505842828366 | -0.108252027219041 |
| PG | 1.87363174745849e-21 | 0.62386248293894 | 6.3357623314264e-24 | 0.652350415327683 | 0.00556032634030437 | -0.202553728880551 |
| STG | 6.4852201676275e-10 | 0.611460249485866 | 1.69913220396185e-11 | 0.652867883756958 | 0.480270503995466 | -0.0780685732892854 |
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Relation with AD stages for LRRC2 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| IFG | ADediting_1065452 | chr3_46516157_- | 0.04897706951583 | -0.397704204776515 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for LRRC2 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for LRRC2 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
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