ADeditome: functional annotation of RNA A-to-I editing in AD

Gene summary for C1orf50

Gene summary

Gene information	Gene symbol	C1orf50
	Gene ID	79078
	Gene name	chromosome 1 open reading frame 50
	Synonyms	-
	Cytomap	1p34.2
	Type of gene	protein-coding
	Description	uncharacterized protein C1orf50
	Modification date	20200313
	UniProtAcc	Q9BV19,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for C1orf50

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_114488(42769050, +), ADediting_114489(42769054, +), ADediting_114490(42769312, +), ADediting_114491(42769336, +), ADediting_114492(42769632, +), ADediting_114493(42769660, +), ADediting_114494(42769696, +), ADediting_114495(42770489, +), ADediting_114496(42770509, +), ADediting_114497(42770532, +), ADediting_114498(42770536, +), ADediting_114499(42770537, +), ADediting_114500(42770562, +), ADediting_114501(42770574, +), ADediting_114502(42770606, +), ADediting_114503(42770615, +), ADediting_114504(42770621, +), ADediting_114505(42770652, +), ADediting_114506(42770694, +), ADediting_114507(42771768, +), ADediting_114508(42771831, +), ADediting_114509(42771871, +), ADediting_114510(42772571, +), ADediting_114511(42772716, +), ADediting_114512(42774297, +), ADediting_114513(42777121, +), ADediting_114514(42777134, +), ADediting_114515(42777150, +), ADediting_114516(42777160, +), ADediting_114517(42777161, +), ADediting_114518(42777166, +), ADediting_114519(42777196, +), ADediting_114520(42777225, +), ADediting_114521(42777230, +), ADediting_114522(42777235, +), ADediting_114523(42777237, +), ADediting_114524(42777257, +), ADediting_114525(42777261, +), ADediting_114526(42777262, +), ADediting_114527(42777270, +), ADediting_114528(42777276, +), ADediting_114529(42777279, +), ADediting_114530(42777285, +), ADediting_114531(42777296, +), ADediting_114532(42777305, +), ADediting_114533(42777330, +), ADediting_114534(42777333, +), ADediting_114535(42777337, +), ADediting_114536(42777346, +), ADediting_114537(42777379, +), ADediting_114538(42779122, +), ADediting_114539(42779123, +), ADediting_114540(42779128, +), ADediting_114541(42779166, +), ADediting_114542(42779190, +), ADediting_114543(42779192, +), ADediting_114544(42779194, +), ADediting_114545(42779230, +), ADediting_114546(42779256, +), ADediting_114547(42779257, +), ADediting_114548(42779262, +), ADediting_114549(42779266, +), ADediting_114550(42779311, +), ADediting_114551(42779318, +), ADediting_114552(42779322, +), ADediting_114553(42779364, +), ADediting_1520087(42777317, +), ADediting_1520088(42779158, +), ADediting_1520089(42779342, +),

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RNA editing positional annotations for C1orf50 using Annovar

Protein coding RNA editing(s).

ADeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_114488	chr1_42769050_+	intronic
ADediting_114489	chr1_42769054_+	intronic
ADediting_114490	chr1_42769312_+	intronic
ADediting_114491	chr1_42769336_+	intronic
ADediting_114492	chr1_42769632_+	intronic
ADediting_114493	chr1_42769660_+	intronic
ADediting_114494	chr1_42769696_+	intronic
ADediting_114495	chr1_42770489_+	intronic
ADediting_114496	chr1_42770509_+	intronic
ADediting_114497	chr1_42770532_+	intronic
ADediting_114498	chr1_42770536_+	intronic
ADediting_114499	chr1_42770537_+	intronic
ADediting_114500	chr1_42770562_+	intronic
ADediting_114501	chr1_42770574_+	intronic
ADediting_114502	chr1_42770606_+	intronic
ADediting_114503	chr1_42770615_+	intronic
ADediting_114504	chr1_42770621_+	intronic
ADediting_114505	chr1_42770652_+	intronic
ADediting_114506	chr1_42770694_+	intronic
ADediting_114507	chr1_42771768_+	intronic
ADediting_114508	chr1_42771831_+	intronic
ADediting_114509	chr1_42771871_+	intronic
ADediting_114510	chr1_42772571_+	intronic
ADediting_114511	chr1_42772716_+	intronic
ADediting_114512	chr1_42774297_+	intronic
ADediting_114513	chr1_42777121_+	UTR3
ADediting_114514	chr1_42777134_+	UTR3
ADediting_114515	chr1_42777150_+	UTR3
ADediting_114516	chr1_42777160_+	UTR3
ADediting_114517	chr1_42777161_+	UTR3
ADediting_114518	chr1_42777166_+	UTR3
ADediting_114519	chr1_42777196_+	UTR3
ADediting_114520	chr1_42777225_+	UTR3
ADediting_114521	chr1_42777230_+	UTR3
ADediting_114522	chr1_42777235_+	UTR3
ADediting_114523	chr1_42777237_+	UTR3
ADediting_114524	chr1_42777257_+	UTR3
ADediting_114525	chr1_42777261_+	UTR3
ADediting_114526	chr1_42777262_+	UTR3
ADediting_114527	chr1_42777270_+	UTR3
ADediting_114528	chr1_42777276_+	UTR3
ADediting_114529	chr1_42777279_+	UTR3
ADediting_114530	chr1_42777285_+	UTR3
ADediting_114531	chr1_42777296_+	UTR3
ADediting_114532	chr1_42777305_+	UTR3
ADediting_114533	chr1_42777330_+	UTR3
ADediting_114534	chr1_42777333_+	UTR3
ADediting_114535	chr1_42777337_+	UTR3
ADediting_114536	chr1_42777346_+	UTR3
ADediting_114537	chr1_42777379_+	UTR3
ADediting_114538	chr1_42779122_+	UTR3
ADediting_114539	chr1_42779123_+	UTR3
ADediting_114540	chr1_42779128_+	UTR3
ADediting_114541	chr1_42779166_+	UTR3
ADediting_114542	chr1_42779190_+	UTR3
ADediting_114543	chr1_42779192_+	UTR3
ADediting_114544	chr1_42779194_+	UTR3
ADediting_114545	chr1_42779230_+	UTR3
ADediting_114546	chr1_42779256_+	UTR3
ADediting_114547	chr1_42779257_+	UTR3
ADediting_114548	chr1_42779262_+	UTR3
ADediting_114549	chr1_42779266_+	UTR3
ADediting_114550	chr1_42779311_+	UTR3
ADediting_114551	chr1_42779318_+	UTR3
ADediting_114552	chr1_42779322_+	UTR3
ADediting_114553	chr1_42779364_+	UTR3
ADediting_1520087	chr1_42777317_+	UTR3
ADediting_1520088	chr1_42779158_+	UTR3
ADediting_1520089	chr1_42779342_+	UTR3

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_114488	chr1_42769050_+	SINE	Alu	Name=AluSz
ADediting_114489	chr1_42769054_+	SINE	Alu	Name=AluSz
ADediting_114490	chr1_42769312_+	SINE	Alu	Name=AluSx3
ADediting_114491	chr1_42769336_+	SINE	Alu	Name=AluSx3
ADediting_114492	chr1_42769632_+	SINE	Alu	Name=AluSx3
ADediting_114493	chr1_42769660_+	SINE	Alu	Name=AluSx3
ADediting_114494	chr1_42769696_+	SINE	Alu	Name=AluSx3
ADediting_114495	chr1_42770489_+	SINE	Alu	Name=AluSp
ADediting_114496	chr1_42770509_+	SINE	Alu	Name=AluSp
ADediting_114497	chr1_42770532_+	SINE	Alu	Name=AluSp
ADediting_114498	chr1_42770536_+	SINE	Alu	Name=AluSp
ADediting_114499	chr1_42770537_+	SINE	Alu	Name=AluSp
ADediting_114500	chr1_42770562_+	SINE	Alu	Name=AluSp
ADediting_114501	chr1_42770574_+	SINE	Alu	Name=AluSp
ADediting_114502	chr1_42770606_+	SINE	Alu	Name=AluSp
ADediting_114503	chr1_42770615_+	SINE	Alu	Name=AluSp
ADediting_114504	chr1_42770621_+	SINE	Alu	Name=AluSp
ADediting_114505	chr1_42770652_+	SINE	Alu	Name=AluSp
ADediting_114506	chr1_42770694_+	SINE	Alu	Name=AluSp
ADediting_114507	chr1_42771768_+	SINE	Alu	Name=AluSz6
ADediting_114508	chr1_42771831_+	SINE	Alu	Name=AluSz6
ADediting_114509	chr1_42771871_+	SINE	Alu	Name=AluSz6
ADediting_114510	chr1_42772571_+	SINE	Alu	Name=AluSq2
ADediting_114511	chr1_42772716_+	SINE	Alu	Name=AluSq2
ADediting_114512	chr1_42774297_+	SINE	Alu	Name=AluSz6
ADediting_114513	chr1_42777121_+	SINE	Alu	Name=AluSc
ADediting_114514	chr1_42777134_+	SINE	Alu	Name=AluSc
ADediting_114515	chr1_42777150_+	SINE	Alu	Name=AluSc
ADediting_114516	chr1_42777160_+	SINE	Alu	Name=AluSc
ADediting_114517	chr1_42777161_+	SINE	Alu	Name=AluSc
ADediting_114518	chr1_42777166_+	SINE	Alu	Name=AluSc
ADediting_114519	chr1_42777196_+	SINE	Alu	Name=AluSc
ADediting_114520	chr1_42777225_+	SINE	Alu	Name=AluSc
ADediting_114521	chr1_42777230_+	SINE	Alu	Name=AluSc
ADediting_114522	chr1_42777235_+	SINE	Alu	Name=AluSc
ADediting_114523	chr1_42777237_+	SINE	Alu	Name=AluSc
ADediting_114524	chr1_42777257_+	SINE	Alu	Name=AluSc
ADediting_114525	chr1_42777261_+	SINE	Alu	Name=AluSc
ADediting_114526	chr1_42777262_+	SINE	Alu	Name=AluSc
ADediting_114527	chr1_42777270_+	SINE	Alu	Name=AluSc
ADediting_114528	chr1_42777276_+	SINE	Alu	Name=AluSc
ADediting_114529	chr1_42777279_+	SINE	Alu	Name=AluSc
ADediting_114530	chr1_42777285_+	SINE	Alu	Name=AluSc
ADediting_114531	chr1_42777296_+	SINE	Alu	Name=AluSc
ADediting_114532	chr1_42777305_+	SINE	Alu	Name=AluSc
ADediting_114533	chr1_42777330_+	SINE	Alu	Name=AluSc
ADediting_114534	chr1_42777333_+	SINE	Alu	Name=AluSc
ADediting_114535	chr1_42777337_+	SINE	Alu	Name=AluSc
ADediting_114536	chr1_42777346_+	SINE	Alu	Name=AluSc
ADediting_114537	chr1_42777379_+	SINE	Alu	Name=AluSc
ADediting_114538	chr1_42779122_+	SINE	Alu	Name=AluY
ADediting_114539	chr1_42779123_+	SINE	Alu	Name=AluY
ADediting_114540	chr1_42779128_+	SINE	Alu	Name=AluY
ADediting_114541	chr1_42779166_+	SINE	Alu	Name=AluY
ADediting_114542	chr1_42779190_+	SINE	Alu	Name=AluY
ADediting_114543	chr1_42779192_+	SINE	Alu	Name=AluY
ADediting_114544	chr1_42779194_+	SINE	Alu	Name=AluY
ADediting_114545	chr1_42779230_+	SINE	Alu	Name=AluY
ADediting_114546	chr1_42779256_+	SINE	Alu	Name=AluY
ADediting_114547	chr1_42779257_+	SINE	Alu	Name=AluY
ADediting_114548	chr1_42779262_+	SINE	Alu	Name=AluY
ADediting_114549	chr1_42779266_+	SINE	Alu	Name=AluY
ADediting_114550	chr1_42779311_+	SINE	Alu	Name=AluY
ADediting_114551	chr1_42779318_+	SINE	Alu	Name=AluY
ADediting_114552	chr1_42779322_+	SINE	Alu	Name=AluY
ADediting_114553	chr1_42779364_+	SINE	Alu	Name=AluY
ADediting_1520087	chr1_42777317_+	SINE	Alu	Name=AluSc
ADediting_1520088	chr1_42779158_+	SINE	Alu	Name=AluY
ADediting_1520089	chr1_42779342_+	SINE	Alu	Name=AluY

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RNA A-to-I editing events in the alternative splicing sites for C1orf50

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for C1orf50

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

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Protein coding region RNA A-to-I editings for C1orf50

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for C1orf50

RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_114513	chr1_42777121_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-340-3p	chr1	42777115	42777122	8mer-1a	42777101	42777122	146	-18.22
ADediting_114513	chr1_42777121_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6827-3p	chr1	42777115	42777122	8mer-1a	42777102	42777122	140	-14.67
ADediting_114514	chr1_42777134_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-196a-3p	chr1	42777132	42777139	8mer-1a	42777117	42777139	147	-17.07
ADediting_114515	chr1_42777150_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4793-3p	chr1	42777146	42777152	7mer-m8	42777131	42777153	154	-20.63
ADediting_114515	chr1_42777150_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-7703	chr1	42777145	42777151	7mer-m8	42777130	42777152	162	-24.32
ADediting_114517	chr1_42777161_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-1199-5p	chr1	42777154	42777160	7mer-m8	42777142	42777161	140	-15.71
ADediting_114517	chr1_42777161_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3672	chr1	42777159	42777165	7mer-m8	42777144	42777166	142	-11.66
ADediting_114517	chr1_42777161_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4499	chr1	42777157	42777163	7mer-m8	42777148	42777164	145	-14.68
ADediting_114517	chr1_42777161_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6751-3p	chr1	42777154	42777160	7mer-m8	42777140	42777161	155	-21.12
ADediting_114517	chr1_42777161_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6857-3p	chr1	42777156	42777162	7mer-m8	42777143	42777163	153	-17.8
ADediting_114517	chr1_42777161_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6864-3p	chr1	42777159	42777165	7mer-m8	42777146	42777166	140	-11.59
ADediting_114517	chr1_42777161_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-873-3p	chr1	42777158	42777165	8mer-1a	42777141	42777165	146	-21.39
ADediting_114519	chr1_42777196_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3622a-3p	chr1	42777192	42777199	8mer-1a	42777178	42777199	146	-16.14
ADediting_114519	chr1_42777196_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3622b-3p	chr1	42777192	42777199	8mer-1a	42777179	42777199	147	-19.2
ADediting_114520	chr1_42777225_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-181a-2-3p	chr1	42777219	42777225	7mer-m8	42777207	42777226	143	-15.09
ADediting_114520	chr1_42777225_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3157-5p	chr1	42777223	42777229	7mer-m8	42777202	42777230	142	-24.52
ADediting_114520	chr1_42777225_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4252	chr1	42777220	42777226	7mer-m8	42777209	42777227	151	-19.78
ADediting_114520	chr1_42777225_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4691-3p	chr1	42777222	42777229	8mer-1a	42777208	42777229	154	-21.11
ADediting_114521	chr1_42777230_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-7977	chr1	42777225	42777231	7mer-m8	42777215	42777232	142	-12.93
ADediting_114525	chr1_42777261_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-1207-3p	chr1	42777254	42777261	8mer-1a	42777244	42777261	144	-14.68
ADediting_114525	chr1_42777261_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-34a-3p	chr1	42777257	42777263	7mer-m8	42777242	42777264	147	-10.17
ADediting_114526	chr1_42777262_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4661-5p	chr1	42777256	42777262	7mer-m8	42777244	42777263	145	-14.64
ADediting_114526	chr1_42777262_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-548ae-3p	chr1	42777260	42777266	7mer-m8	42777247	42777267	141	-6.06
ADediting_114526	chr1_42777262_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-548ah-3p	chr1	42777260	42777266	7mer-m8	42777245	42777267	143	-6.06
ADediting_114526	chr1_42777262_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-548aj-3p	chr1	42777260	42777266	7mer-m8	42777247	42777267	141	-6.96
ADediting_114526	chr1_42777262_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-548am-3p	chr1	42777260	42777266	7mer-m8	42777245	42777267	143	-6.06
ADediting_114526	chr1_42777262_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-548aq-3p	chr1	42777260	42777266	7mer-m8	42777246	42777267	141	-6.06
ADediting_114526	chr1_42777262_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-548j-3p	chr1	42777260	42777266	7mer-m8	42777247	42777267	141	-6.06
ADediting_114526	chr1_42777262_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-548x-3p	chr1	42777260	42777266	7mer-m8	42777248	42777267	141	-6.96
ADediting_114526	chr1_42777262_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-7844-5p	chr1	42777258	42777264	7mer-m8	42777244	42777265	160	-18.3
ADediting_114527	chr1_42777270_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3613-3p	chr1	42777263	42777269	7mer-m8	42777247	42777270	154	-9.56
ADediting_114530	chr1_42777285_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-340-3p	chr1	42777279	42777285	7mer-m8	42777265	42777286	149	-17.69
ADediting_114530	chr1_42777285_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6827-3p	chr1	42777279	42777285	7mer-m8	42777266	42777286	153	-17.53
ADediting_114531	chr1_42777296_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-433-5p	chr1	42777290	42777296	7mer-m8	42777274	42777297	167	-28.7
ADediting_114534	chr1_42777333_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3619-3p	chr1	42777329	42777336	8mer-1a	42777315	42777336	140	-13.38
ADediting_114534	chr1_42777333_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4800-5p	chr1	42777331	42777337	7mer-m8	42777314	42777338	152	-22.96
ADediting_114534	chr1_42777333_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-591	chr1	42777328	42777334	7mer-m8	42777316	42777335	153	-16.12
ADediting_114535	chr1_42777337_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3937	chr1	42777334	42777340	7mer-m8	42777315	42777341	146	-22.98
ADediting_114536	chr1_42777346_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6089	chr1	42777344	42777350	7mer-m8	42777329	42777351	164	-38.53
ADediting_114537	chr1_42777379_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3622b-5p	chr1	42777374	42777380	7mer-m8	42777362	42777381	154	-27.79
ADediting_114537	chr1_42777379_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4645-5p	chr1	42777377	42777383	7mer-m8	42777366	42777384	142	-13.03
ADediting_114537	chr1_42777379_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4673	chr1	42777377	42777383	7mer-m8	42777360	42777384	147	-23.76
ADediting_114538	chr1_42779122_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-513a-5p	chr1	42779116	42779122	7mer-m8	42779106	42779123	144	-16.68
ADediting_114538	chr1_42779122_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-638	chr1	42779121	42779127	7mer-1a	42779103	42779127	157	-32.92
ADediting_114539	chr1_42779123_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-8052	chr1	42779121	42779127	7mer-1a	42779109	42779127	140	-24.15
ADediting_114540	chr1_42779128_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-371a-3p	chr1	42779126	42779132	7mer-m8	42779111	42779133	145	-17.36
ADediting_114542	chr1_42779190_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3146	chr1	42779186	42779193	8mer-1a	42779173	42779193	151	-17.98
ADediting_114544	chr1_42779194_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4716-5p	chr1	42779188	42779194	7mer-m8	42779174	42779195	140	-11.49
ADediting_114546	chr1_42779256_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-513a-5p	chr1	42779250	42779256	7mer-m8	42779240	42779257	140	-18.01
ADediting_114546	chr1_42779256_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-638	chr1	42779255	42779261	7mer-1a	42779237	42779261	155	-34.54
ADediting_114547	chr1_42779257_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-8052	chr1	42779255	42779261	7mer-1a	42779241	42779261	141	-23.11
ADediting_114549	chr1_42779266_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-1207-3p	chr1	42779259	42779265	7mer-m8	42779249	42779266	140	-12.56
ADediting_114549	chr1_42779266_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-646	chr1	42779261	42779267	7mer-m8	42779250	42779268	145	-14.99
ADediting_114550	chr1_42779311_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-10401-3p	chr1	42779305	42779311	7mer-m8	42779293	42779312	152	-25.6
ADediting_114550	chr1_42779311_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-7109-3p	chr1	42779308	42779314	7mer-m8	42779294	42779315	159	-27.21
ADediting_114552	chr1_42779322_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-324-3p	chr1	42779315	42779321	7mer-m8	42779302	42779322	142	-23.42
ADediting_114552	chr1_42779322_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6075	chr1	42779319	42779326	8mer-1a	42779304	42779326	148	-23.5
ADediting_1520087	chr1_42777317_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4524a-3p	chr1	42777314	42777320	7mer-m8	42777299	42777321	149	-17.03

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_114513	chr1_42777121_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3664-5p	chr1	42777118	42777124	7mer-m8	42777104	42777125	153	-15.73
ADediting_114513	chr1_42777121_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4522	chr1	42777119	42777125	7mer-m8	42777106	42777126	148	-12.83
ADediting_114513	chr1_42777121_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6888-3p	chr1	42777116	42777122	7mer-m8	42777103	42777123	151	-14.42
ADediting_114516	chr1_42777160_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-5186	chr1	42777158	42777165	8mer-1a	42777141	42777165	145	-19.97
ADediting_114516	chr1_42777160_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6807-5p	chr1	42777153	42777160	8mer-1a	42777139	42777160	151	-18.41
ADediting_114517	chr1_42777161_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-5186	chr1	42777158	42777165	8mer-1a	42777141	42777165	145	-19.97
ADediting_114518	chr1_42777166_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-320e	chr1	42777164	42777170	7mer-1a	42777152	42777170	145	-19.06
ADediting_114520	chr1_42777225_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-5690	chr1	42777222	42777229	8mer-1a	42777209	42777229	145	-16.69
ADediting_114523	chr1_42777237_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6720-3p	chr1	42777235	42777242	8mer-1a	42777221	42777242	148	-16.2
ADediting_114524	chr1_42777257_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-1285-3p	chr1	42777251	42777257	7mer-m8	42777237	42777258	140	-16.92
ADediting_114524	chr1_42777257_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-5189-5p	chr1	42777251	42777257	7mer-m8	42777236	42777258	145	-22.84
ADediting_114529	chr1_42777279_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4684-5p	chr1	42777276	42777282	7mer-m8	42777262	42777283	151	-12.03
ADediting_114529	chr1_42777279_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-593-3p	chr1	42777278	42777284	7mer-1a	42777266	42777284	140	-19.02
ADediting_114530	chr1_42777285_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-10a-5p	chr1	42777282	42777288	7mer-m8	42777267	42777289	145	-13.67
ADediting_114530	chr1_42777285_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-10b-5p	chr1	42777282	42777288	7mer-m8	42777267	42777289	140	-12.49
ADediting_114530	chr1_42777285_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-339-5p	chr1	42777281	42777287	7mer-m8	42777265	42777288	152	-17.69
ADediting_114530	chr1_42777285_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4421	chr1	42777280	42777286	7mer-m8	42777266	42777287	154	-16.06
ADediting_114530	chr1_42777285_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-5699-3p	chr1	42777280	42777286	7mer-m8	42777266	42777287	153	-17.34
ADediting_114530	chr1_42777285_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6818-3p	chr1	42777278	42777284	7mer-m8	42777264	42777285	140	-11.1
ADediting_114532	chr1_42777305_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3190-5p	chr1	42777299	42777305	7mer-m8	42777287	42777306	147	-18.34
ADediting_114532	chr1_42777305_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-548s	chr1	42777298	42777304	7mer-m8	42777281	42777305	143	-15.64
ADediting_114532	chr1_42777305_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-660-3p	chr1	42777303	42777309	7mer-m8	42777289	42777310	152	-23.24
ADediting_114535	chr1_42777337_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-12114	chr1	42777333	42777339	7mer-m8	42777323	42777340	155	-29.3
ADediting_114535	chr1_42777337_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3165	chr1	42777332	42777338	7mer-m8	42777320	42777339	144	-16
ADediting_114535	chr1_42777337_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3665	chr1	42777335	42777341	7mer-m8	42777325	42777342	140	-16.04
ADediting_114536	chr1_42777346_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4478	chr1	42777343	42777349	7mer-m8	42777335	42777350	149	-22.24
ADediting_114536	chr1_42777346_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4649-3p	chr1	42777340	42777346	7mer-m8	42777327	42777347	140	-14.63
ADediting_114536	chr1_42777346_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-485-5p	chr1	42777344	42777350	7mer-m8	42777330	42777351	149	-16.01
ADediting_114536	chr1_42777346_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-7160-5p	chr1	42777341	42777347	7mer-m8	42777326	42777348	145	-19.94
ADediting_114538	chr1_42779122_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-10399-5p	chr1	42779117	42779123	7mer-m8	42779103	42779124	144	-10.39
ADediting_114538	chr1_42779122_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6504-3p	chr1	42779117	42779123	7mer-m8	42779103	42779124	152	-15.11
ADediting_114538	chr1_42779122_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-7151-3p	chr1	42779115	42779122	8mer-1a	42779098	42779122	145	-21.31
ADediting_114539	chr1_42779123_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-10399-5p	chr1	42779117	42779123	7mer-m8	42779103	42779124	144	-10.39
ADediting_114539	chr1_42779123_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-5089-5p	chr1	42779121	42779127	7mer-m8	42779106	42779128	148	-14.13
ADediting_114539	chr1_42779123_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6504-3p	chr1	42779117	42779123	7mer-m8	42779103	42779124	152	-15.11
ADediting_114540	chr1_42779128_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-5089-5p	chr1	42779121	42779127	7mer-m8	42779106	42779128	148	-14.13
ADediting_114540	chr1_42779128_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-512-3p	chr1	42779126	42779132	7mer-m8	42779112	42779133	149	-15.51
ADediting_114540	chr1_42779128_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6506-5p	chr1	42779122	42779128	7mer-m8	42779107	42779129	144	-13.78
ADediting_114545	chr1_42779230_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4735-5p	chr1	42779224	42779230	7mer-m8	42779210	42779231	140	-4.28
ADediting_114546	chr1_42779256_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-10399-5p	chr1	42779251	42779257	7mer-m8	42779239	42779258	141	-12.5
ADediting_114546	chr1_42779256_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6504-3p	chr1	42779251	42779257	7mer-m8	42779237	42779258	148	-14.75
ADediting_114546	chr1_42779256_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-7151-3p	chr1	42779249	42779256	8mer-1a	42779236	42779256	140	-12.68
ADediting_114547	chr1_42779257_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-10399-5p	chr1	42779251	42779257	7mer-m8	42779239	42779258	141	-12.5
ADediting_114547	chr1_42779257_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-5089-5p	chr1	42779255	42779261	7mer-m8	42779242	42779262	144	-13.27
ADediting_114547	chr1_42779257_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6504-3p	chr1	42779251	42779257	7mer-m8	42779237	42779258	148	-14.75
ADediting_114548	chr1_42779262_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-5089-5p	chr1	42779255	42779261	7mer-m8	42779242	42779262	144	-13.27
ADediting_114548	chr1_42779262_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6506-5p	chr1	42779256	42779262	7mer-m8	42779241	42779263	144	-15.62
ADediting_114551	chr1_42779318_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-2276-3p	chr1	42779312	42779318	7mer-m8	42779298	42779319	148	-17.56
ADediting_114552	chr1_42779322_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-4284	chr1	42779318	42779324	7mer-m8	42779308	42779325	144	-12.71
ADediting_114553	chr1_42779364_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-431-5p	chr1	42779361	42779367	7mer-m8	42779348	42779368	140	-13.39
ADediting_114553	chr1_42779364_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-5691	chr1	42779357	42779364	8mer-1a	42779343	42779364	153	-22.95
ADediting_114553	chr1_42779364_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-6805-3p	chr1	42779357	42779364	8mer-1a	42779342	42779364	154	-18.56
ADediting_1520087	chr1_42777317_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-3976	chr1	42777311	42777317	7mer-m8	42777295	42777318	142	-11.66
ADediting_1520089	chr1_42779342_+	ENSG00000164008.16	ENST00000372525.7	C1orf50-201	hsa-miR-504-3p	chr1	42779339	42779346	8mer-1a	42779326	42779346	152	-23.54

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1097295

chr3_85385762_+

ENSG00000164008.16

ENST00000372525.7

C1orf50-201

hsa-miR-5688

chr1

42775978

42775984

7mer-m8

42775966

42775985

148

-16.69

ADediting_1471004

chr9_63819627_+

ENSG00000164008.16

ENST00000372525.7

C1orf50-201

hsa-miR-4477b

chr1

42778885

42778891

7mer-m8

42778871

42778892

140

-13.55

ADediting_1535954

chr14_101045974_+

ENSG00000164008.16

ENST00000372525.7

C1orf50-201

hsa-miR-381-3p

chr1

42778944

42778950

7mer-m8

42778930

42778951

144

-16.22

ADediting_1596844

chr1_162342605_+

ENSG00000164008.16

ENST00000372525.7

C1orf50-201

hsa-miR-556-3p

chr1

42777772

42777778

7mer-m8

42777760

42777779

149

-10.64

ADediting_1631458

chr19_40282624_-

ENSG00000164008.16

ENST00000372525.7

C1orf50-201

hsa-miR-641

chr1

42778636

42778642

7mer-m8

42778621

42778643

148

-22.39

ADediting_286380

chr11_79422188_-

ENSG00000164008.16

ENST00000372525.7

C1orf50-201

hsa-miR-5579-3p

chr1

42778072

42778078

7mer-m8

42778059

42778079

154

-16.81

ADediting_286380

chr11_79422188_-

ENSG00000164008.16

ENST00000372525.7

C1orf50-201

hsa-miR-5579-3p

chr1

42778584

42778590

7mer-m8

42778570

42778591

150

-13.18

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_107020

chr1_37500952_-

ENSG00000164008.16

ENST00000372525.7

C1orf50-201

hsa-miR-5581-3p

chr1

42778361

42778368

8mer-1a

42778346

42778368

148

-16.31

ADediting_1596844

chr1_162342605_+

ENSG00000164008.16

ENST00000372525.7

C1orf50-201

hsa-miR-556-3p

chr1

42778837

42778843

7mer-m8

42778823

42778844

148

-14

ADediting_843620

chr2_207754818_+

ENSG00000164008.16

ENST00000372525.7

C1orf50-201

hsa-miR-4775

chr1

42776331

42776337

7mer-m8

42776317

42776338

140

-6.58

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for C1orf50

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000372525.7	protein_coding
ENST00000468913.2	lncRNA

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_114513	ENST00000372525.7	chr1_42777121_+	2390	-1687.80	-1684.00	-1741.70
ADediting_114514	ENST00000372525.7	chr1_42777134_+	2403	-1690.20	-1684.00	-1741.70
ADediting_114515	ENST00000372525.7	chr1_42777150_+	2419	-1690.70	-1684.00	-1741.70
ADediting_114516	ENST00000372525.7	chr1_42777160_+	2429	-1683.70	-1684.00	-1741.70
ADediting_114517	ENST00000372525.7	chr1_42777161_+	2430	-1684.00	-1684.00	-1741.70
ADediting_114518	ENST00000372525.7	chr1_42777166_+	2435	-1690.20	-1684.00	-1741.70
ADediting_114519	ENST00000372525.7	chr1_42777196_+	2465	-1686.40	-1684.00	-1741.70
ADediting_114520	ENST00000372525.7	chr1_42777225_+	2494	-1683.70	-1684.00	-1741.70
ADediting_114521	ENST00000372525.7	chr1_42777230_+	2499	-1690.90	-1684.00	-1741.70
ADediting_114522	ENST00000372525.7	chr1_42777235_+	2504	-1684.00	-1684.00	-1741.70
ADediting_114523	ENST00000372525.7	chr1_42777237_+	2506	-1683.30	-1684.00	-1741.70
ADediting_114524	ENST00000372525.7	chr1_42777257_+	2526	-1690.20	-1684.00	-1741.70
ADediting_114525	ENST00000372525.7	chr1_42777261_+	2530	-1684.10	-1684.00	-1741.70
ADediting_114526	ENST00000372525.7	chr1_42777262_+	2531	-1684.00	-1684.00	-1741.70
ADediting_114527	ENST00000372525.7	chr1_42777270_+	2539	-1684.00	-1684.00	-1741.70
ADediting_114528	ENST00000372525.7	chr1_42777276_+	2545	-1683.70	-1684.00	-1741.70
ADediting_114529	ENST00000372525.7	chr1_42777279_+	2548	-1683.70	-1684.00	-1741.70
ADediting_114530	ENST00000372525.7	chr1_42777285_+	2554	-1683.30	-1684.00	-1741.70
ADediting_114531	ENST00000372525.7	chr1_42777296_+	2565	-1684.30	-1684.00	-1741.70
ADediting_114532	ENST00000372525.7	chr1_42777305_+	2574	-1683.30	-1684.00	-1741.70
ADediting_1520087	ENST00000372525.7	chr1_42777317_+	2586	-1684.40	-1684.00	-1741.70
ADediting_114533	ENST00000372525.7	chr1_42777330_+	2599	-1689.80	-1684.00	-1741.70
ADediting_114534	ENST00000372525.7	chr1_42777333_+	2602	-1683.40	-1684.00	-1741.70
ADediting_114535	ENST00000372525.7	chr1_42777337_+	2606	-1689.40	-1684.00	-1741.70
ADediting_114536	ENST00000372525.7	chr1_42777346_+	2615	-1683.30	-1684.00	-1741.70
ADediting_114537	ENST00000372525.7	chr1_42777379_+	2648	-1686.60	-1684.00	-1741.70
ADediting_114538	ENST00000372525.7	chr1_42779122_+	4391	-1684.40	-1684.00	-1741.70
ADediting_114539	ENST00000372525.7	chr1_42779123_+	4392	-1683.70	-1684.00	-1741.70
ADediting_114540	ENST00000372525.7	chr1_42779128_+	4397	-1683.70	-1684.00	-1741.70
ADediting_1520088	ENST00000372525.7	chr1_42779158_+	4427	-1684.00	-1684.00	-1741.70
ADediting_114541	ENST00000372525.7	chr1_42779166_+	4435	-1683.20	-1684.00	-1741.70
ADediting_114542	ENST00000372525.7	chr1_42779190_+	4459	-1684.00	-1684.00	-1741.70
ADediting_114543	ENST00000372525.7	chr1_42779192_+	4461	-1683.60	-1684.00	-1741.70
ADediting_114544	ENST00000372525.7	chr1_42779194_+	4463	-1690.60	-1684.00	-1741.70
ADediting_114545	ENST00000372525.7	chr1_42779230_+	4499	-1683.70	-1684.00	-1741.70
ADediting_114546	ENST00000372525.7	chr1_42779256_+	4525	-1684.10	-1684.00	-1741.70
ADediting_114547	ENST00000372525.7	chr1_42779257_+	4526	-1684.00	-1684.00	-1741.70
ADediting_114548	ENST00000372525.7	chr1_42779262_+	4531	-1683.30	-1684.00	-1741.70
ADediting_114549	ENST00000372525.7	chr1_42779266_+	4535	-1684.00	-1684.00	-1741.70
ADediting_114550	ENST00000372525.7	chr1_42779311_+	4580	-1686.70	-1684.00	-1741.70
ADediting_114551	ENST00000372525.7	chr1_42779318_+	4587	-1690.20	-1684.00	-1741.70
ADediting_114552	ENST00000372525.7	chr1_42779322_+	4591	-1683.20	-1684.00	-1741.70
ADediting_1520089	ENST00000372525.7	chr1_42779342_+	4611	-1684.30	-1684.00	-1741.70
ADediting_114553	ENST00000372525.7	chr1_42779364_+	4633	-1690.00	-1684.00	-1741.70

RNA A-to-I editing in lncRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_114494	ENST00000468913.2	chr1_42769696_+	19	-175.10	-172.50	-175.10

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Relation with ADAR for C1orf50

Correlation between ADAR gene expression and RNA editing frequency

Tissue

ADeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	1.24034793648184e-22	0.517484428712602	2.89466501160825e-11	0.366082462599066	1.11082035407884e-31	0.599863400120404
AC	2.53648735305476e-62	0.821062804033126	3.44570009252713e-42	0.725871265916958	1.8775589938255e-15	0.474673933687909
PCC	1.67685864702506e-19	0.592703608446078	1.9752975914822e-16	0.549036018932121	0.000346758551973843	0.25621360293856
CER	1.20563532749999e-13	0.557872749298979	0.000936623469845762	0.267468663659015	0.0148221746310376	0.198630368418946
TCX	1.61712206503855e-18	0.638029409982041	0.00027446519366183	0.292969748717172	5.52662175038766e-05	0.323055104966008
FP	3.37571391545962e-11	0.470639562258738	2.31031803697244e-07	0.376018380020475	0.0125483476139931	0.186774707236774
IFG	0.004219668609296	0.55206657533979	0.00503431521477555	0.542995278518438	0.735256087333386	0.0711870594933968
PG	6.15407030470037e-27	0.683387542251788	6.90801216335828e-15	0.53040417904681	0.488897448958109	0.0510556317792604
STG	3.01376280265063e-10	0.620697921555078	0.000174355651862219	0.398420592680523	0.192041562985529	0.143752945056314

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Relation with AD stages for C1orf50

Correlation between AD stages and RNA editing frequency

Tissue

ADeditomID

position

P-val

Coeff.

Correlation between AD stages and this gene's expression

Tissue

P-val

Coeff.

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RelatedDrugs for C1orf50

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for C1orf50

Diseases associated with this gene.
(DisGeNet 4.0)

Gene

Disease ID

Disease name

# pubmeds

Source

Home

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Statistics

Landscape

Help

Contact

Gene summary for C1orf50

RNA A-to-I events for C1orf50

RNA editing positional annotations for C1orf50 using Annovar

RNA A-to-I editing events in the alternative splicing sites for C1orf50

Differntial gene expression between RNA A-to-I edited versus non-edited samples for C1orf50

Protein coding region RNA A-to-I editings for C1orf50

The effects of the RNA editing to the miRNA binding sites for C1orf50

The effects of the RNA editing to the stability of the RNA structures for C1orf50

Relation with ADAR for C1orf50

Relation with AD stages for C1orf50

RelatedDrugs for C1orf50

RelatedDiseases for C1orf50

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene