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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for CACNB1 |
 Gene summary |
| Gene information | Gene symbol | CACNB1 | Gene ID | 782 |
| Gene name | calcium voltage-gated channel auxiliary subunit beta 1 | |
| Synonyms | CAB1|CACNLB1|CCHLB1 | |
| Cytomap | 17q12 | |
| Type of gene | protein-coding | |
| Description | voltage-dependent L-type calcium channel subunit beta-1calcium channel voltage-dependent subunit beta 1calcium channel, L type, beta 1 polypeptidecalcium channel, voltage-dependent, beta 1 subunitdihydropyridine-sensitive L-type, calcium channel beta- | |
| Modification date | 20200313 | |
| UniProtAcc | Q02641, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for CACNB1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_615571(39178449, -), ADediting_615572(39178451, -), ADediting_615573(39178457, -), ADediting_615574(39178460, -), ADediting_615575(39178468, -), ADediting_615576(39178496, -), ADediting_615577(39178504, -), ADediting_615578(39178518, -), ADediting_615579(39178528, -), ADediting_615580(39178533, -), ADediting_615581(39178536, -), ADediting_615582(39178544, -), ADediting_615583(39178548, -), ADediting_615584(39178559, -), ADediting_615585(39178578, -), ADediting_615586(39178579, -), ADediting_615587(39178581, -), ADediting_615588(39178582, -), ADediting_615589(39178586, -), ADediting_615590(39178596, -), ADediting_615591(39178610, -), ADediting_615592(39178628, -), ADediting_615593(39178629, -), ADediting_615594(39178641, -), ADediting_615595(39178650, -), ADediting_615596(39178655, -), ADediting_615597(39178656, -), ADediting_615598(39178658, -), ADediting_615599(39178664, -), ADediting_615600(39178672, -), ADediting_615601(39179049, -), ADediting_615602(39179074, -), ADediting_615603(39179104, -), ADediting_615604(39179109, -), ADediting_615605(39179126, -), ADediting_615606(39179129, -), ADediting_615607(39179171, -), ADediting_615608(39179176, -), ADediting_615609(39179181, -), ADediting_615610(39179184, -), ADediting_615611(39179254, -), ADediting_615612(39179359, -), ADediting_615613(39179421, -), ADediting_615614(39179424, -), ADediting_615615(39179453, -), ADediting_615616(39179459, -), ADediting_615617(39179469, -), ADediting_615618(39179505, -), ADediting_615619(39179529, -), ADediting_615620(39179565, -), ADediting_615621(39179651, -), ADediting_615622(39179682, -), ADediting_615623(39179716, -), ADediting_615624(39179787, -), ADediting_615625(39179797, -), ADediting_615626(39179832, -), ADediting_615627(39179833, -), ADediting_615628(39179857, -), ADediting_615629(39180006, -), ADediting_615630(39180018, -), ADediting_615631(39180019, -), ADediting_615632(39180020, -), ADediting_615633(39180033, -), ADediting_615634(39180048, -), ADediting_615635(39180082, -), ADediting_615636(39180099, -), ADediting_615637(39180125, -), ADediting_615638(39180143, -), ADediting_615639(39180153, -), ADediting_615640(39180165, -), ADediting_615641(39180176, -), ADediting_615642(39180179, -), ADediting_615643(39180185, -), ADediting_615644(39180200, -), ADediting_615645(39180205, -), ADediting_615646(39180249, -), ADediting_615647(39180398, -), ADediting_615648(39180410, -), ADediting_615649(39180411, -), ADediting_615650(39180420, -), ADediting_615651(39180435, -), ADediting_615652(39180436, -), ADediting_615653(39180489, -), ADediting_615654(39180492, -), ADediting_615655(39180531, -), ADediting_615656(39180533, -), ADediting_615657(39180543, -), ADediting_615658(39180546, -), ADediting_615659(39180547, -), ADediting_615660(39180568, -), ADediting_615661(39180572, -), ADediting_615662(39180573, -), ADediting_615663(39180579, -), ADediting_615664(39180648, -), ADediting_615665(39180805, -), ADediting_615666(39180815, -), ADediting_615667(39180845, -), ADediting_615668(39180850, -), ADediting_615669(39180851, -), ADediting_615670(39180857, -), ADediting_615671(39180873, -), ADediting_615672(39180877, -), ADediting_615673(39181123, -), ADediting_615674(39181124, -), ADediting_615675(39181141, -), ADediting_615676(39181146, -), ADediting_615677(39181161, -), ADediting_615678(39181166, -), ADediting_615679(39181190, -), ADediting_615680(39181218, -), ADediting_615681(39181222, -), ADediting_615682(39181231, -), ADediting_615683(39181232, -), ADediting_615684(39181238, -), ADediting_615685(39181250, -), ADediting_615686(39181258, -), ADediting_615687(39181262, -), ADediting_615688(39181263, -), ADediting_615689(39181271, -), ADediting_615690(39181272, -), ADediting_615691(39181273, -), ADediting_615692(39181276, -), ADediting_615693(39181287, -), ADediting_615694(39181292, -), ADediting_615695(39181295, -), ADediting_615696(39181297, -), ADediting_615697(39181307, -), ADediting_615698(39181312, -), ADediting_615699(39181313, -), ADediting_615700(39181320, -), ADediting_615701(39181358, -), ADediting_615702(39181366, -), ADediting_615703(39181367, -), ADediting_615704(39181373, -), ADediting_615705(39181385, -), ADediting_615706(39181389, -), ADediting_615707(39181760, -), ADediting_615708(39181772, -), ADediting_615709(39181773, -), ADediting_615710(39181782, -), ADediting_615711(39181800, -), ADediting_615712(39181813, -), ADediting_615713(39181815, -), ADediting_615714(39181849, -), ADediting_615715(39181852, -), ADediting_615716(39181912, -), ADediting_615717(39181918, -), ADediting_615718(39181978, -), ADediting_615719(39181995, -), ADediting_615720(39181998, -), ADediting_615721(39182039, -), ADediting_615722(39182049, -), ADediting_615723(39182146, -), ADediting_615724(39182245, -), ADediting_615725(39182252, -), ADediting_615726(39182268, -), ADediting_615727(39182444, -), ADediting_615728(39182456, -), ADediting_615729(39182457, -), ADediting_615730(39182471, -), ADediting_615731(39182516, -), ADediting_615732(39182533, -), ADediting_615733(39182536, -), ADediting_615734(39182552, -), ADediting_615735(39182553, -), ADediting_615736(39182580, -), ADediting_615737(39182602, -), ADediting_615738(39182619, -), ADediting_615739(39182620, -), ADediting_615740(39182626, -), ADediting_615741(39182639, -), ADediting_615742(39182640, -), ADediting_615743(39182645, -), ADediting_615744(39183168, -), ADediting_615745(39183210, -), ADediting_615746(39183220, -), ADediting_615747(39183237, -), ADediting_615748(39183245, -), ADediting_615749(39183246, -), ADediting_615750(39183250, -), ADediting_615751(39183251, -), ADediting_615752(39183270, -), ADediting_615753(39183285, -), ADediting_615754(39187851, -), ADediting_615755(39188856, -), ADediting_615756(39188872, -), ADediting_615757(39188921, -), ADediting_615758(39189319, -), ADediting_615759(39189537, -), ADediting_615760(39189659, -), ADediting_615761(39189671, -), ADediting_615762(39189691, -), ADediting_615763(39189701, -), ADediting_615764(39189770, -), ADediting_615765(39189771, -), ADediting_615766(39189847, -), ADediting_615767(39189855, -), ADediting_615768(39189867, -), ADediting_615769(39189868, -), ADediting_615770(39190003, -), ADediting_615771(39190080, -), ADediting_615772(39190520, -), ADediting_615773(39190556, -), ADediting_615774(39190565, -), ADediting_615775(39190566, -), ADediting_615776(39190621, -), ADediting_615777(39194167, -), ADediting_1546249(39178584, -), ADediting_1546250(39179050, -), ADediting_1546251(39179865, -), ADediting_1546252(39180102, -), ADediting_1546253(39181321, -), ADediting_1546254(39181855, -), ADediting_1546255(39182426, -), |
Top |
RNA editing positional annotations for CACNB1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_615571 | chr17_39178449_- | intronic |
| ADediting_615572 | chr17_39178451_- | intronic |
| ADediting_615573 | chr17_39178457_- | intronic |
| ADediting_615574 | chr17_39178460_- | intronic |
| ADediting_615575 | chr17_39178468_- | intronic |
| ADediting_615576 | chr17_39178496_- | intronic |
| ADediting_615577 | chr17_39178504_- | intronic |
| ADediting_615578 | chr17_39178518_- | intronic |
| ADediting_615579 | chr17_39178528_- | intronic |
| ADediting_615580 | chr17_39178533_- | intronic |
| ADediting_615581 | chr17_39178536_- | intronic |
| ADediting_615582 | chr17_39178544_- | intronic |
| ADediting_615583 | chr17_39178548_- | intronic |
| ADediting_615584 | chr17_39178559_- | intronic |
| ADediting_615585 | chr17_39178578_- | intronic |
| ADediting_615586 | chr17_39178579_- | intronic |
| ADediting_615587 | chr17_39178581_- | intronic |
| ADediting_615588 | chr17_39178582_- | intronic |
| ADediting_615589 | chr17_39178586_- | intronic |
| ADediting_615590 | chr17_39178596_- | intronic |
| ADediting_615591 | chr17_39178610_- | intronic |
| ADediting_615592 | chr17_39178628_- | intronic |
| ADediting_615593 | chr17_39178629_- | intronic |
| ADediting_615594 | chr17_39178641_- | intronic |
| ADediting_615595 | chr17_39178650_- | intronic |
| ADediting_615596 | chr17_39178655_- | intronic |
| ADediting_615597 | chr17_39178656_- | intronic |
| ADediting_615598 | chr17_39178658_- | intronic |
| ADediting_615599 | chr17_39178664_- | intronic |
| ADediting_615600 | chr17_39178672_- | intronic |
| ADediting_615601 | chr17_39179049_- | intronic |
| ADediting_615602 | chr17_39179074_- | intronic |
| ADediting_615603 | chr17_39179104_- | intronic |
| ADediting_615604 | chr17_39179109_- | intronic |
| ADediting_615605 | chr17_39179126_- | intronic |
| ADediting_615606 | chr17_39179129_- | intronic |
| ADediting_615607 | chr17_39179171_- | intronic |
| ADediting_615608 | chr17_39179176_- | intronic |
| ADediting_615609 | chr17_39179181_- | intronic |
| ADediting_615610 | chr17_39179184_- | intronic |
| ADediting_615611 | chr17_39179254_- | intronic |
| ADediting_615612 | chr17_39179359_- | intronic |
| ADediting_615613 | chr17_39179421_- | intronic |
| ADediting_615614 | chr17_39179424_- | intronic |
| ADediting_615615 | chr17_39179453_- | intronic |
| ADediting_615616 | chr17_39179459_- | intronic |
| ADediting_615617 | chr17_39179469_- | intronic |
| ADediting_615618 | chr17_39179505_- | intronic |
| ADediting_615619 | chr17_39179529_- | intronic |
| ADediting_615620 | chr17_39179565_- | intronic |
| ADediting_615621 | chr17_39179651_- | intronic |
| ADediting_615622 | chr17_39179682_- | intronic |
| ADediting_615623 | chr17_39179716_- | intronic |
| ADediting_615624 | chr17_39179787_- | intronic |
| ADediting_615625 | chr17_39179797_- | intronic |
| ADediting_615626 | chr17_39179832_- | intronic |
| ADediting_615627 | chr17_39179833_- | intronic |
| ADediting_615628 | chr17_39179857_- | intronic |
| ADediting_615629 | chr17_39180006_- | intronic |
| ADediting_615630 | chr17_39180018_- | intronic |
| ADediting_615631 | chr17_39180019_- | intronic |
| ADediting_615632 | chr17_39180020_- | intronic |
| ADediting_615633 | chr17_39180033_- | intronic |
| ADediting_615634 | chr17_39180048_- | intronic |
| ADediting_615635 | chr17_39180082_- | intronic |
| ADediting_615636 | chr17_39180099_- | intronic |
| ADediting_615637 | chr17_39180125_- | intronic |
| ADediting_615638 | chr17_39180143_- | intronic |
| ADediting_615639 | chr17_39180153_- | intronic |
| ADediting_615640 | chr17_39180165_- | intronic |
| ADediting_615641 | chr17_39180176_- | intronic |
| ADediting_615642 | chr17_39180179_- | intronic |
| ADediting_615643 | chr17_39180185_- | intronic |
| ADediting_615644 | chr17_39180200_- | intronic |
| ADediting_615645 | chr17_39180205_- | intronic |
| ADediting_615646 | chr17_39180249_- | intronic |
| ADediting_615647 | chr17_39180398_- | intronic |
| ADediting_615648 | chr17_39180410_- | intronic |
| ADediting_615649 | chr17_39180411_- | intronic |
| ADediting_615650 | chr17_39180420_- | intronic |
| ADediting_615651 | chr17_39180435_- | intronic |
| ADediting_615652 | chr17_39180436_- | intronic |
| ADediting_615653 | chr17_39180489_- | intronic |
| ADediting_615654 | chr17_39180492_- | intronic |
| ADediting_615655 | chr17_39180531_- | intronic |
| ADediting_615656 | chr17_39180533_- | intronic |
| ADediting_615657 | chr17_39180543_- | intronic |
| ADediting_615658 | chr17_39180546_- | intronic |
| ADediting_615659 | chr17_39180547_- | intronic |
| ADediting_615660 | chr17_39180568_- | intronic |
| ADediting_615661 | chr17_39180572_- | intronic |
| ADediting_615662 | chr17_39180573_- | intronic |
| ADediting_615663 | chr17_39180579_- | intronic |
| ADediting_615664 | chr17_39180648_- | intronic |
| ADediting_615665 | chr17_39180805_- | intronic |
| ADediting_615666 | chr17_39180815_- | intronic |
| ADediting_615667 | chr17_39180845_- | intronic |
| ADediting_615668 | chr17_39180850_- | intronic |
| ADediting_615669 | chr17_39180851_- | intronic |
| ADediting_615670 | chr17_39180857_- | intronic |
| ADediting_615671 | chr17_39180873_- | intronic |
| ADediting_615672 | chr17_39180877_- | intronic |
| ADediting_615673 | chr17_39181123_- | intronic |
| ADediting_615674 | chr17_39181124_- | intronic |
| ADediting_615675 | chr17_39181141_- | intronic |
| ADediting_615676 | chr17_39181146_- | intronic |
| ADediting_615677 | chr17_39181161_- | intronic |
| ADediting_615678 | chr17_39181166_- | intronic |
| ADediting_615679 | chr17_39181190_- | intronic |
| ADediting_615680 | chr17_39181218_- | intronic |
| ADediting_615681 | chr17_39181222_- | intronic |
| ADediting_615682 | chr17_39181231_- | intronic |
| ADediting_615683 | chr17_39181232_- | intronic |
| ADediting_615684 | chr17_39181238_- | intronic |
| ADediting_615685 | chr17_39181250_- | intronic |
| ADediting_615686 | chr17_39181258_- | intronic |
| ADediting_615687 | chr17_39181262_- | intronic |
| ADediting_615688 | chr17_39181263_- | intronic |
| ADediting_615689 | chr17_39181271_- | intronic |
| ADediting_615690 | chr17_39181272_- | intronic |
| ADediting_615691 | chr17_39181273_- | intronic |
| ADediting_615692 | chr17_39181276_- | intronic |
| ADediting_615693 | chr17_39181287_- | intronic |
| ADediting_615694 | chr17_39181292_- | intronic |
| ADediting_615695 | chr17_39181295_- | intronic |
| ADediting_615696 | chr17_39181297_- | intronic |
| ADediting_615697 | chr17_39181307_- | intronic |
| ADediting_615698 | chr17_39181312_- | intronic |
| ADediting_615699 | chr17_39181313_- | intronic |
| ADediting_615700 | chr17_39181320_- | intronic |
| ADediting_615701 | chr17_39181358_- | intronic |
| ADediting_615702 | chr17_39181366_- | intronic |
| ADediting_615703 | chr17_39181367_- | intronic |
| ADediting_615704 | chr17_39181373_- | intronic |
| ADediting_615705 | chr17_39181385_- | intronic |
| ADediting_615706 | chr17_39181389_- | intronic |
| ADediting_615707 | chr17_39181760_- | intronic |
| ADediting_615708 | chr17_39181772_- | intronic |
| ADediting_615709 | chr17_39181773_- | intronic |
| ADediting_615710 | chr17_39181782_- | intronic |
| ADediting_615711 | chr17_39181800_- | intronic |
| ADediting_615712 | chr17_39181813_- | intronic |
| ADediting_615713 | chr17_39181815_- | intronic |
| ADediting_615714 | chr17_39181849_- | intronic |
| ADediting_615715 | chr17_39181852_- | intronic |
| ADediting_615716 | chr17_39181912_- | intronic |
| ADediting_615717 | chr17_39181918_- | intronic |
| ADediting_615718 | chr17_39181978_- | intronic |
| ADediting_615719 | chr17_39181995_- | intronic |
| ADediting_615720 | chr17_39181998_- | intronic |
| ADediting_615721 | chr17_39182039_- | intronic |
| ADediting_615722 | chr17_39182049_- | intronic |
| ADediting_615723 | chr17_39182146_- | intronic |
| ADediting_615724 | chr17_39182245_- | intronic |
| ADediting_615725 | chr17_39182252_- | intronic |
| ADediting_615726 | chr17_39182268_- | intronic |
| ADediting_615727 | chr17_39182444_- | intronic |
| ADediting_615728 | chr17_39182456_- | intronic |
| ADediting_615729 | chr17_39182457_- | intronic |
| ADediting_615730 | chr17_39182471_- | intronic |
| ADediting_615731 | chr17_39182516_- | intronic |
| ADediting_615732 | chr17_39182533_- | intronic |
| ADediting_615733 | chr17_39182536_- | intronic |
| ADediting_615734 | chr17_39182552_- | intronic |
| ADediting_615735 | chr17_39182553_- | intronic |
| ADediting_615736 | chr17_39182580_- | intronic |
| ADediting_615737 | chr17_39182602_- | intronic |
| ADediting_615738 | chr17_39182619_- | intronic |
| ADediting_615739 | chr17_39182620_- | intronic |
| ADediting_615740 | chr17_39182626_- | intronic |
| ADediting_615741 | chr17_39182639_- | intronic |
| ADediting_615742 | chr17_39182640_- | intronic |
| ADediting_615743 | chr17_39182645_- | intronic |
| ADediting_615744 | chr17_39183168_- | intronic |
| ADediting_615745 | chr17_39183210_- | intronic |
| ADediting_615746 | chr17_39183220_- | intronic |
| ADediting_615747 | chr17_39183237_- | intronic |
| ADediting_615748 | chr17_39183245_- | intronic |
| ADediting_615749 | chr17_39183246_- | intronic |
| ADediting_615750 | chr17_39183250_- | intronic |
| ADediting_615751 | chr17_39183251_- | intronic |
| ADediting_615752 | chr17_39183270_- | intronic |
| ADediting_615753 | chr17_39183285_- | intronic |
| ADediting_615754 | chr17_39187851_- | intronic |
| ADediting_615755 | chr17_39188856_- | intronic |
| ADediting_615756 | chr17_39188872_- | intronic |
| ADediting_615757 | chr17_39188921_- | intronic |
| ADediting_615758 | chr17_39189319_- | intronic |
| ADediting_615759 | chr17_39189537_- | intronic |
| ADediting_615760 | chr17_39189659_- | intronic |
| ADediting_615761 | chr17_39189671_- | intronic |
| ADediting_615762 | chr17_39189691_- | intronic |
| ADediting_615763 | chr17_39189701_- | intronic |
| ADediting_615764 | chr17_39189770_- | intronic |
| ADediting_615765 | chr17_39189771_- | intronic |
| ADediting_615766 | chr17_39189847_- | intronic |
| ADediting_615767 | chr17_39189855_- | intronic |
| ADediting_615768 | chr17_39189867_- | intronic |
| ADediting_615769 | chr17_39189868_- | intronic |
| ADediting_615770 | chr17_39190003_- | intronic |
| ADediting_615771 | chr17_39190080_- | intronic |
| ADediting_615772 | chr17_39190520_- | intronic |
| ADediting_615773 | chr17_39190556_- | intronic |
| ADediting_615774 | chr17_39190565_- | intronic |
| ADediting_615775 | chr17_39190566_- | intronic |
| ADediting_615776 | chr17_39190621_- | intronic |
| ADediting_615777 | chr17_39194167_- | intronic |
| ADediting_1546249 | chr17_39178584_- | intronic |
| ADediting_1546250 | chr17_39179050_- | intronic |
| ADediting_1546251 | chr17_39179865_- | intronic |
| ADediting_1546252 | chr17_39180102_- | intronic |
| ADediting_1546253 | chr17_39181321_- | intronic |
| ADediting_1546254 | chr17_39181855_- | intronic |
| ADediting_1546255 | chr17_39182426_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_615571 | chr17_39178449_- | SINE | Alu | Name=AluJr4 |
| ADediting_615572 | chr17_39178451_- | SINE | Alu | Name=AluJr4 |
| ADediting_615573 | chr17_39178457_- | SINE | Alu | Name=AluJr4 |
| ADediting_615574 | chr17_39178460_- | SINE | Alu | Name=AluJr4 |
| ADediting_615575 | chr17_39178468_- | SINE | Alu | Name=AluJr4 |
| ADediting_615576 | chr17_39178496_- | SINE | Alu | Name=AluJr4 |
| ADediting_615577 | chr17_39178504_- | SINE | Alu | Name=AluJr4 |
| ADediting_615578 | chr17_39178518_- | SINE | Alu | Name=AluJr4 |
| ADediting_615579 | chr17_39178528_- | SINE | Alu | Name=AluJr4 |
| ADediting_615580 | chr17_39178533_- | SINE | Alu | Name=AluJr4 |
| ADediting_615581 | chr17_39178536_- | SINE | Alu | Name=AluJr4 |
| ADediting_615582 | chr17_39178544_- | SINE | Alu | Name=AluJr4 |
| ADediting_615583 | chr17_39178548_- | SINE | Alu | Name=AluJr4 |
| ADediting_615584 | chr17_39178559_- | SINE | Alu | Name=AluJr4 |
| ADediting_615585 | chr17_39178578_- | SINE | Alu | Name=AluJr4 |
| ADediting_615586 | chr17_39178579_- | SINE | Alu | Name=AluJr4 |
| ADediting_615587 | chr17_39178581_- | SINE | Alu | Name=AluJr4 |
| ADediting_615588 | chr17_39178582_- | SINE | Alu | Name=AluJr4 |
| ADediting_615589 | chr17_39178586_- | SINE | Alu | Name=AluJr4 |
| ADediting_615590 | chr17_39178596_- | SINE | Alu | Name=AluJr4 |
| ADediting_615591 | chr17_39178610_- | SINE | Alu | Name=AluJr4 |
| ADediting_615592 | chr17_39178628_- | SINE | Alu | Name=AluJr4 |
| ADediting_615593 | chr17_39178629_- | SINE | Alu | Name=AluJr4 |
| ADediting_615594 | chr17_39178641_- | SINE | Alu | Name=AluJr4 |
| ADediting_615595 | chr17_39178650_- | SINE | Alu | Name=AluJr4 |
| ADediting_615596 | chr17_39178655_- | SINE | Alu | Name=AluJr4 |
| ADediting_615597 | chr17_39178656_- | SINE | Alu | Name=AluJr4 |
| ADediting_615598 | chr17_39178658_- | SINE | Alu | Name=AluJr4 |
| ADediting_615599 | chr17_39178664_- | SINE | Alu | Name=AluJr4 |
| ADediting_615600 | chr17_39178672_- | SINE | Alu | Name=AluJr4 |
| ADediting_615601 | chr17_39179049_- | SINE | Alu | Name=AluY |
| ADediting_615602 | chr17_39179074_- | SINE | Alu | Name=AluY |
| ADediting_615603 | chr17_39179104_- | SINE | Alu | Name=AluY |
| ADediting_615604 | chr17_39179109_- | SINE | Alu | Name=AluY |
| ADediting_615605 | chr17_39179126_- | SINE | Alu | Name=AluY |
| ADediting_615606 | chr17_39179129_- | SINE | Alu | Name=AluY |
| ADediting_615607 | chr17_39179171_- | SINE | Alu | Name=AluY |
| ADediting_615608 | chr17_39179176_- | SINE | Alu | Name=AluY |
| ADediting_615609 | chr17_39179181_- | SINE | Alu | Name=AluY |
| ADediting_615610 | chr17_39179184_- | SINE | Alu | Name=AluY |
| ADediting_615611 | chr17_39179254_- | SINE | Alu | Name=AluY |
| ADediting_615612 | chr17_39179359_- | SINE | Alu | Name=AluY |
| ADediting_615613 | chr17_39179421_- | SINE | Alu | Name=AluY |
| ADediting_615614 | chr17_39179424_- | SINE | Alu | Name=AluY |
| ADediting_615615 | chr17_39179453_- | SINE | Alu | Name=AluY |
| ADediting_615616 | chr17_39179459_- | SINE | Alu | Name=AluY |
| ADediting_615617 | chr17_39179469_- | SINE | Alu | Name=AluY |
| ADediting_615618 | chr17_39179505_- | SINE | Alu | Name=AluY |
| ADediting_615619 | chr17_39179529_- | SINE | Alu | Name=AluY |
| ADediting_615620 | chr17_39179565_- | SINE | Alu | Name=AluY |
| ADediting_615621 | chr17_39179651_- | SINE | Alu | Name=AluSx |
| ADediting_615622 | chr17_39179682_- | SINE | Alu | Name=AluSx |
| ADediting_615623 | chr17_39179716_- | SINE | Alu | Name=AluSx |
| ADediting_615624 | chr17_39179787_- | SINE | Alu | Name=AluSx |
| ADediting_615625 | chr17_39179797_- | SINE | Alu | Name=AluSx |
| ADediting_615626 | chr17_39179832_- | SINE | Alu | Name=AluSx |
| ADediting_615627 | chr17_39179833_- | SINE | Alu | Name=AluSx |
| ADediting_615628 | chr17_39179857_- | SINE | Alu | Name=AluSx |
| ADediting_615629 | chr17_39180006_- | SINE | Alu | Name=AluSq |
| ADediting_615630 | chr17_39180018_- | SINE | Alu | Name=AluSq |
| ADediting_615631 | chr17_39180019_- | SINE | Alu | Name=AluSq |
| ADediting_615632 | chr17_39180020_- | SINE | Alu | Name=AluSq |
| ADediting_615633 | chr17_39180033_- | SINE | Alu | Name=AluSq |
| ADediting_615634 | chr17_39180048_- | SINE | Alu | Name=AluSq |
| ADediting_615635 | chr17_39180082_- | SINE | Alu | Name=AluSq |
| ADediting_615636 | chr17_39180099_- | SINE | Alu | Name=AluSq |
| ADediting_615637 | chr17_39180125_- | SINE | Alu | Name=AluSq |
| ADediting_615638 | chr17_39180143_- | SINE | Alu | Name=AluSq |
| ADediting_615639 | chr17_39180153_- | SINE | Alu | Name=AluSq |
| ADediting_615640 | chr17_39180165_- | SINE | Alu | Name=AluSq |
| ADediting_615641 | chr17_39180176_- | SINE | Alu | Name=AluSq |
| ADediting_615642 | chr17_39180179_- | SINE | Alu | Name=AluSq |
| ADediting_615643 | chr17_39180185_- | SINE | Alu | Name=AluSq |
| ADediting_615644 | chr17_39180200_- | SINE | Alu | Name=AluSq |
| ADediting_615645 | chr17_39180205_- | SINE | Alu | Name=AluSq |
| ADediting_615646 | chr17_39180249_- | SINE | Alu | Name=AluSq |
| ADediting_615647 | chr17_39180398_- | SINE | Alu | Name=AluSx1 |
| ADediting_615648 | chr17_39180410_- | SINE | Alu | Name=AluSx1 |
| ADediting_615649 | chr17_39180411_- | SINE | Alu | Name=AluSx1 |
| ADediting_615650 | chr17_39180420_- | SINE | Alu | Name=AluSx1 |
| ADediting_615651 | chr17_39180435_- | SINE | Alu | Name=AluSx1 |
| ADediting_615652 | chr17_39180436_- | SINE | Alu | Name=AluSx1 |
| ADediting_615653 | chr17_39180489_- | SINE | Alu | Name=AluSx1 |
| ADediting_615654 | chr17_39180492_- | SINE | Alu | Name=AluSx1 |
| ADediting_615655 | chr17_39180531_- | SINE | Alu | Name=AluSx1 |
| ADediting_615656 | chr17_39180533_- | SINE | Alu | Name=AluSx1 |
| ADediting_615657 | chr17_39180543_- | SINE | Alu | Name=AluSx1 |
| ADediting_615658 | chr17_39180546_- | SINE | Alu | Name=AluSx1 |
| ADediting_615659 | chr17_39180547_- | SINE | Alu | Name=AluSx1 |
| ADediting_615660 | chr17_39180568_- | SINE | Alu | Name=AluSx1 |
| ADediting_615661 | chr17_39180572_- | SINE | Alu | Name=AluSx1 |
| ADediting_615662 | chr17_39180573_- | SINE | Alu | Name=AluSx1 |
| ADediting_615663 | chr17_39180579_- | SINE | Alu | Name=AluSx1 |
| ADediting_615664 | chr17_39180648_- | SINE | Alu | Name=AluSx1 |
| ADediting_615665 | chr17_39180805_- | SINE | Alu | Name=AluSz6 |
| ADediting_615666 | chr17_39180815_- | SINE | Alu | Name=AluSz6 |
| ADediting_615667 | chr17_39180845_- | SINE | Alu | Name=AluSz6 |
| ADediting_615668 | chr17_39180850_- | SINE | Alu | Name=AluSz6 |
| ADediting_615669 | chr17_39180851_- | SINE | Alu | Name=AluSz6 |
| ADediting_615670 | chr17_39180857_- | SINE | Alu | Name=AluSz6 |
| ADediting_615671 | chr17_39180873_- | SINE | Alu | Name=AluSz6 |
| ADediting_615672 | chr17_39180877_- | LINE | L1 | Name=L1MC4 |
| ADediting_615673 | chr17_39181123_- | SINE | Alu | Name=AluSx1 |
| ADediting_615674 | chr17_39181124_- | SINE | Alu | Name=AluSx1 |
| ADediting_615675 | chr17_39181141_- | SINE | Alu | Name=AluSx1 |
| ADediting_615676 | chr17_39181146_- | SINE | Alu | Name=AluSx1 |
| ADediting_615677 | chr17_39181161_- | SINE | Alu | Name=AluSx1 |
| ADediting_615678 | chr17_39181166_- | SINE | Alu | Name=AluSx1 |
| ADediting_615679 | chr17_39181190_- | SINE | Alu | Name=AluSx1 |
| ADediting_615680 | chr17_39181218_- | SINE | Alu | Name=AluSx1 |
| ADediting_615681 | chr17_39181222_- | SINE | Alu | Name=AluSx1 |
| ADediting_615682 | chr17_39181231_- | SINE | Alu | Name=AluSx1 |
| ADediting_615683 | chr17_39181232_- | SINE | Alu | Name=AluSx1 |
| ADediting_615684 | chr17_39181238_- | SINE | Alu | Name=AluSx1 |
| ADediting_615685 | chr17_39181250_- | SINE | Alu | Name=AluSx1 |
| ADediting_615686 | chr17_39181258_- | SINE | Alu | Name=AluSx1 |
| ADediting_615687 | chr17_39181262_- | SINE | Alu | Name=AluSx1 |
| ADediting_615688 | chr17_39181263_- | SINE | Alu | Name=AluSx1 |
| ADediting_615689 | chr17_39181271_- | SINE | Alu | Name=AluSx1 |
| ADediting_615690 | chr17_39181272_- | SINE | Alu | Name=AluSx1 |
| ADediting_615691 | chr17_39181273_- | SINE | Alu | Name=AluSx1 |
| ADediting_615692 | chr17_39181276_- | SINE | Alu | Name=AluSx1 |
| ADediting_615693 | chr17_39181287_- | SINE | Alu | Name=AluSx1 |
| ADediting_615694 | chr17_39181292_- | SINE | Alu | Name=AluSx1 |
| ADediting_615695 | chr17_39181295_- | SINE | Alu | Name=AluSx1 |
| ADediting_615696 | chr17_39181297_- | SINE | Alu | Name=AluSx1 |
| ADediting_615697 | chr17_39181307_- | SINE | Alu | Name=AluSx1 |
| ADediting_615698 | chr17_39181312_- | SINE | Alu | Name=AluSx1 |
| ADediting_615699 | chr17_39181313_- | SINE | Alu | Name=AluSx1 |
| ADediting_615700 | chr17_39181320_- | SINE | Alu | Name=AluSx1 |
| ADediting_615701 | chr17_39181358_- | SINE | Alu | Name=AluSx1 |
| ADediting_615702 | chr17_39181366_- | SINE | Alu | Name=AluSx1 |
| ADediting_615703 | chr17_39181367_- | SINE | Alu | Name=AluSx1 |
| ADediting_615704 | chr17_39181373_- | SINE | Alu | Name=AluSx1 |
| ADediting_615705 | chr17_39181385_- | SINE | Alu | Name=AluSx1 |
| ADediting_615706 | chr17_39181389_- | SINE | Alu | Name=AluSx1 |
| ADediting_615707 | chr17_39181760_- | SINE | Alu | Name=AluSz |
| ADediting_615708 | chr17_39181772_- | SINE | Alu | Name=AluSz |
| ADediting_615709 | chr17_39181773_- | SINE | Alu | Name=AluSz |
| ADediting_615710 | chr17_39181782_- | SINE | Alu | Name=AluSz |
| ADediting_615711 | chr17_39181800_- | SINE | Alu | Name=AluSz |
| ADediting_615712 | chr17_39181813_- | SINE | Alu | Name=AluSz |
| ADediting_615713 | chr17_39181815_- | SINE | Alu | Name=AluSz |
| ADediting_615714 | chr17_39181849_- | SINE | Alu | Name=AluSz |
| ADediting_615715 | chr17_39181852_- | SINE | Alu | Name=AluSz |
| ADediting_615716 | chr17_39181912_- | SINE | Alu | Name=AluSx4 |
| ADediting_615717 | chr17_39181918_- | SINE | Alu | Name=AluSx4 |
| ADediting_615718 | chr17_39181978_- | SINE | Alu | Name=AluSx4 |
| ADediting_615719 | chr17_39181995_- | SINE | Alu | Name=AluSx4 |
| ADediting_615720 | chr17_39181998_- | SINE | Alu | Name=AluSx4 |
| ADediting_615721 | chr17_39182039_- | SINE | Alu | Name=AluSx4 |
| ADediting_615722 | chr17_39182049_- | SINE | Alu | Name=AluSx4 |
| ADediting_615723 | chr17_39182146_- | SINE | Alu | Name=AluSx4 |
| ADediting_615724 | chr17_39182245_- | SINE | Alu | Name=AluSz |
| ADediting_615725 | chr17_39182252_- | SINE | Alu | Name=AluSz |
| ADediting_615726 | chr17_39182268_- | SINE | Alu | Name=AluSz |
| ADediting_615727 | chr17_39182444_- | SINE | Alu | Name=AluSc8 |
| ADediting_615728 | chr17_39182456_- | SINE | Alu | Name=AluSc8 |
| ADediting_615729 | chr17_39182457_- | SINE | Alu | Name=AluSc8 |
| ADediting_615730 | chr17_39182471_- | SINE | Alu | Name=AluSc8 |
| ADediting_615731 | chr17_39182516_- | SINE | Alu | Name=AluSc8 |
| ADediting_615732 | chr17_39182533_- | SINE | Alu | Name=AluSc8 |
| ADediting_615733 | chr17_39182536_- | SINE | Alu | Name=AluSc8 |
| ADediting_615734 | chr17_39182552_- | SINE | Alu | Name=AluSc8 |
| ADediting_615735 | chr17_39182553_- | SINE | Alu | Name=AluSc8 |
| ADediting_615736 | chr17_39182580_- | SINE | Alu | Name=AluSc8 |
| ADediting_615737 | chr17_39182602_- | SINE | Alu | Name=AluSc8 |
| ADediting_615738 | chr17_39182619_- | SINE | Alu | Name=AluSc8 |
| ADediting_615739 | chr17_39182620_- | SINE | Alu | Name=AluSc8 |
| ADediting_615740 | chr17_39182626_- | SINE | Alu | Name=AluSc8 |
| ADediting_615741 | chr17_39182639_- | SINE | Alu | Name=AluSc8 |
| ADediting_615742 | chr17_39182640_- | SINE | Alu | Name=AluSc8 |
| ADediting_615743 | chr17_39182645_- | SINE | Alu | Name=AluSc8 |
| ADediting_615744 | chr17_39183168_- | SINE | Alu | Name=AluJr |
| ADediting_615745 | chr17_39183210_- | SINE | Alu | Name=AluJr |
| ADediting_615746 | chr17_39183220_- | SINE | Alu | Name=AluJr |
| ADediting_615747 | chr17_39183237_- | SINE | Alu | Name=AluJr |
| ADediting_615748 | chr17_39183245_- | SINE | Alu | Name=AluJr |
| ADediting_615749 | chr17_39183246_- | SINE | Alu | Name=AluJr |
| ADediting_615750 | chr17_39183250_- | SINE | Alu | Name=AluJr |
| ADediting_615751 | chr17_39183251_- | SINE | Alu | Name=AluJr |
| ADediting_615752 | chr17_39183270_- | SINE | Alu | Name=AluJr |
| ADediting_615753 | chr17_39183285_- | SINE | Alu | Name=AluJr |
| ADediting_615754 | chr17_39187851_- | SINE | Alu | Name=AluSx1 |
| ADediting_615755 | chr17_39188856_- | SINE | Alu | Name=AluSq |
| ADediting_615756 | chr17_39188872_- | SINE | Alu | Name=AluSq |
| ADediting_615757 | chr17_39188921_- | SINE | Alu | Name=AluSq |
| ADediting_615758 | chr17_39189319_- | SINE | Alu | Name=AluSg |
| ADediting_615759 | chr17_39189537_- | SINE | Alu | Name=AluSp |
| ADediting_615760 | chr17_39189659_- | SINE | Alu | Name=AluSp |
| ADediting_615761 | chr17_39189671_- | SINE | Alu | Name=AluSp |
| ADediting_615762 | chr17_39189691_- | SINE | Alu | Name=AluSp |
| ADediting_615763 | chr17_39189701_- | SINE | Alu | Name=AluSp |
| ADediting_615764 | chr17_39189770_- | SINE | Alu | Name=AluSp |
| ADediting_615765 | chr17_39189771_- | SINE | Alu | Name=AluSp |
| ADediting_615766 | chr17_39189847_- | SINE | Alu | Name=AluSx1 |
| ADediting_615767 | chr17_39189855_- | SINE | Alu | Name=AluSx1 |
| ADediting_615768 | chr17_39189867_- | SINE | Alu | Name=AluSx1 |
| ADediting_615769 | chr17_39189868_- | SINE | Alu | Name=AluSx1 |
| ADediting_615770 | chr17_39190003_- | SINE | Alu | Name=AluSx1 |
| ADediting_615771 | chr17_39190080_- | SINE | Alu | Name=AluSx1 |
| ADediting_615772 | chr17_39190520_- | SINE | Alu | Name=AluSz |
| ADediting_615773 | chr17_39190556_- | SINE | Alu | Name=AluSz |
| ADediting_615774 | chr17_39190565_- | SINE | Alu | Name=AluSz |
| ADediting_615775 | chr17_39190566_- | SINE | Alu | Name=AluSz |
| ADediting_615776 | chr17_39190621_- | SINE | Alu | Name=AluSz |
| ADediting_1546249 | chr17_39178584_- | SINE | Alu | Name=AluJr4 |
| ADediting_1546250 | chr17_39179050_- | SINE | Alu | Name=AluY |
| ADediting_1546251 | chr17_39179865_- | SINE | Alu | Name=AluSx |
| ADediting_1546252 | chr17_39180102_- | SINE | Alu | Name=AluSq |
| ADediting_1546253 | chr17_39181321_- | SINE | Alu | Name=AluSx1 |
| ADediting_1546254 | chr17_39181855_- | SINE | Alu | Name=AluSz |
| ADediting_1546255 | chr17_39182426_- | SINE | Alu | Name=AluSc8 |
Top |
RNA A-to-I editing events in the alternative splicing sites for CACNB1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for CACNB1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |