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![]() | Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for UFD1 |
Gene summary |
| Gene information | Gene symbol | UFD1 | Gene ID | 7353 |
| Gene name | ubiquitin recognition factor in ER associated degradation 1 | |
| Synonyms | UFD1L | |
| Cytomap | 22q11.21 | |
| Type of gene | protein-coding | |
| Description | ubiquitin recognition factor in ER-associated degradation protein 1UB fusion protein 1ubiquitin fusion degradation 1 likeubiquitin fusion degradation protein 1 homolog | |
| Modification date | 20200322 | |
| UniProtAcc | Q92890, | |
| Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for UFD1 |
RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA editing frequencies across three data sets. |
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The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA A-to-I editing events in AD. |
| ADediting_968933(19450857, -), ADediting_968934(19450879, -), ADediting_968935(19450891, -), ADediting_968936(19450906, -), ADediting_968937(19450918, -), ADediting_968938(19450919, -), ADediting_968939(19450931, -), ADediting_968940(19450932, -), ADediting_968941(19450944, -), ADediting_968942(19450953, -), ADediting_968943(19450956, -), ADediting_968944(19450961, -), ADediting_968945(19450970, -), ADediting_968946(19450992, -), ADediting_968947(19450994, -), ADediting_968948(19450996, -), ADediting_968949(19451000, -), ADediting_968950(19451012, -), ADediting_968951(19451015, -), ADediting_968952(19451016, -), ADediting_968953(19451040, -), ADediting_968954(19451041, -), ADediting_968955(19451042, -), ADediting_968956(19451055, -), ADediting_968957(19451065, -), ADediting_968958(19451077, -), ADediting_968959(19451156, -), ADediting_968960(19452585, -), ADediting_968961(19452592, -), ADediting_968962(19452597, -), ADediting_968963(19452640, -), ADediting_968964(19452662, -), ADediting_968965(19452664, -), ADediting_968966(19452672, -), ADediting_968967(19452724, -), ADediting_968968(19452728, -), ADediting_968969(19452738, -), ADediting_968970(19452741, -), ADediting_968971(19452749, -), ADediting_968972(19452752, -), ADediting_968973(19452757, -), ADediting_968974(19452767, -), ADediting_968975(19452791, -), ADediting_968976(19452813, -), ADediting_968977(19452819, -), ADediting_968978(19452820, -), ADediting_968979(19458512, -), ADediting_968980(19458598, -), ADediting_968981(19458608, -), ADediting_968982(19459358, -), ADediting_968983(19459370, -), ADediting_968984(19459425, -), ADediting_968985(19459447, -), ADediting_968986(19459450, -), ADediting_968987(19459457, -), ADediting_968988(19459487, -), ADediting_968989(19459491, -), ADediting_968990(19459493, -), ADediting_968991(19459503, -), ADediting_968992(19459563, -), ADediting_968993(19459568, -), ADediting_968994(19459801, -), ADediting_968995(19459806, -), ADediting_968996(19459807, -), ADediting_968997(19459849, -), ADediting_968998(19459877, -), ADediting_968999(19459883, -), ADediting_969000(19459938, -), ADediting_969001(19460009, -), ADediting_969002(19460010, -), ADediting_969003(19460884, -), ADediting_969004(19461035, -), ADediting_969005(19462071, -), ADediting_969006(19462085, -), ADediting_969007(19462102, -), ADediting_969008(19462233, -), ADediting_969009(19462281, -), ADediting_969010(19462286, -), ADediting_969011(19462421, -), ADediting_969012(19462431, -), ADediting_969013(19462449, -), ADediting_969014(19462474, -), ADediting_969015(19462486, -), ADediting_969016(19462493, -), ADediting_969017(19462503, -), ADediting_969018(19462553, -), ADediting_969019(19462556, -), ADediting_969020(19462584, -), ADediting_969021(19462601, -), ADediting_969022(19462608, -), ADediting_969023(19462684, -), ADediting_969024(19466595, -), ADediting_969025(19466816, -), ADediting_1569631(19450968, -), ADediting_1569632(19451068, -), ADediting_1569633(19452652, -), ADediting_1569634(19452729, -), ADediting_1569635(19462195, -), ADediting_1642083(19462272, -), |
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RNA editing positional annotations for UFD1 using Annovar |
Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_968933 | chr22_19450857_- | intronic |
| ADediting_968934 | chr22_19450879_- | intronic |
| ADediting_968935 | chr22_19450891_- | intronic |
| ADediting_968936 | chr22_19450906_- | intronic |
| ADediting_968937 | chr22_19450918_- | intronic |
| ADediting_968938 | chr22_19450919_- | intronic |
| ADediting_968939 | chr22_19450931_- | intronic |
| ADediting_968940 | chr22_19450932_- | intronic |
| ADediting_968941 | chr22_19450944_- | intronic |
| ADediting_968942 | chr22_19450953_- | intronic |
| ADediting_968943 | chr22_19450956_- | intronic |
| ADediting_968944 | chr22_19450961_- | intronic |
| ADediting_968945 | chr22_19450970_- | intronic |
| ADediting_968946 | chr22_19450992_- | intronic |
| ADediting_968947 | chr22_19450994_- | intronic |
| ADediting_968948 | chr22_19450996_- | intronic |
| ADediting_968949 | chr22_19451000_- | intronic |
| ADediting_968950 | chr22_19451012_- | intronic |
| ADediting_968951 | chr22_19451015_- | intronic |
| ADediting_968952 | chr22_19451016_- | intronic |
| ADediting_968953 | chr22_19451040_- | intronic |
| ADediting_968954 | chr22_19451041_- | intronic |
| ADediting_968955 | chr22_19451042_- | intronic |
| ADediting_968956 | chr22_19451055_- | intronic |
| ADediting_968957 | chr22_19451065_- | intronic |
| ADediting_968958 | chr22_19451077_- | intronic |
| ADediting_968959 | chr22_19451156_- | intronic |
| ADediting_968960 | chr22_19452585_- | intronic |
| ADediting_968961 | chr22_19452592_- | intronic |
| ADediting_968962 | chr22_19452597_- | intronic |
| ADediting_968963 | chr22_19452640_- | intronic |
| ADediting_968964 | chr22_19452662_- | intronic |
| ADediting_968965 | chr22_19452664_- | intronic |
| ADediting_968966 | chr22_19452672_- | intronic |
| ADediting_968967 | chr22_19452724_- | intronic |
| ADediting_968968 | chr22_19452728_- | intronic |
| ADediting_968969 | chr22_19452738_- | intronic |
| ADediting_968970 | chr22_19452741_- | intronic |
| ADediting_968971 | chr22_19452749_- | intronic |
| ADediting_968972 | chr22_19452752_- | intronic |
| ADediting_968973 | chr22_19452757_- | intronic |
| ADediting_968974 | chr22_19452767_- | intronic |
| ADediting_968975 | chr22_19452791_- | intronic |
| ADediting_968976 | chr22_19452813_- | intronic |
| ADediting_968977 | chr22_19452819_- | intronic |
| ADediting_968978 | chr22_19452820_- | intronic |
| ADediting_968979 | chr22_19458512_- | intronic |
| ADediting_968980 | chr22_19458598_- | intronic |
| ADediting_968981 | chr22_19458608_- | intronic |
| ADediting_968982 | chr22_19459358_- | intronic |
| ADediting_968983 | chr22_19459370_- | intronic |
| ADediting_968984 | chr22_19459425_- | intronic |
| ADediting_968985 | chr22_19459447_- | intronic |
| ADediting_968986 | chr22_19459450_- | intronic |
| ADediting_968987 | chr22_19459457_- | intronic |
| ADediting_968988 | chr22_19459487_- | intronic |
| ADediting_968989 | chr22_19459491_- | intronic |
| ADediting_968990 | chr22_19459493_- | intronic |
| ADediting_968991 | chr22_19459503_- | intronic |
| ADediting_968992 | chr22_19459563_- | intronic |
| ADediting_968993 | chr22_19459568_- | intronic |
| ADediting_968994 | chr22_19459801_- | intronic |
| ADediting_968995 | chr22_19459806_- | intronic |
| ADediting_968996 | chr22_19459807_- | intronic |
| ADediting_968997 | chr22_19459849_- | intronic |
| ADediting_968998 | chr22_19459877_- | intronic |
| ADediting_968999 | chr22_19459883_- | intronic |
| ADediting_969000 | chr22_19459938_- | intronic |
| ADediting_969001 | chr22_19460009_- | intronic |
| ADediting_969002 | chr22_19460010_- | intronic |
| ADediting_969003 | chr22_19460884_- | intronic |
| ADediting_969004 | chr22_19461035_- | intronic |
| ADediting_969005 | chr22_19462071_- | intronic |
| ADediting_969006 | chr22_19462085_- | intronic |
| ADediting_969007 | chr22_19462102_- | intronic |
| ADediting_969008 | chr22_19462233_- | intronic |
| ADediting_969009 | chr22_19462281_- | intronic |
| ADediting_969010 | chr22_19462286_- | intronic |
| ADediting_969011 | chr22_19462421_- | intronic |
| ADediting_969012 | chr22_19462431_- | intronic |
| ADediting_969013 | chr22_19462449_- | intronic |
| ADediting_969014 | chr22_19462474_- | intronic |
| ADediting_969015 | chr22_19462486_- | intronic |
| ADediting_969016 | chr22_19462493_- | intronic |
| ADediting_969017 | chr22_19462503_- | intronic |
| ADediting_969018 | chr22_19462553_- | intronic |
| ADediting_969019 | chr22_19462556_- | intronic |
| ADediting_969020 | chr22_19462584_- | intronic |
| ADediting_969021 | chr22_19462601_- | intronic |
| ADediting_969022 | chr22_19462608_- | intronic |
| ADediting_969023 | chr22_19462684_- | intronic |
| ADediting_969024 | chr22_19466595_- | intronic |
| ADediting_969025 | chr22_19466816_- | intronic |
| ADediting_1569631 | chr22_19450968_- | intronic |
| ADediting_1569632 | chr22_19451068_- | intronic |
| ADediting_1569633 | chr22_19452652_- | intronic |
| ADediting_1569634 | chr22_19452729_- | intronic |
| ADediting_1569635 | chr22_19462195_- | intronic |
| ADediting_1642083 | chr22_19462272_- | intronic |
Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_968933 | chr22_19450857_- | SINE | Alu | Name=AluJo |
| ADediting_968934 | chr22_19450879_- | SINE | Alu | Name=AluJo |
| ADediting_968935 | chr22_19450891_- | SINE | Alu | Name=AluJo |
| ADediting_968936 | chr22_19450906_- | SINE | Alu | Name=AluJo |
| ADediting_968937 | chr22_19450918_- | SINE | Alu | Name=AluJo |
| ADediting_968938 | chr22_19450919_- | SINE | Alu | Name=AluJo |
| ADediting_968939 | chr22_19450931_- | SINE | Alu | Name=AluJo |
| ADediting_968940 | chr22_19450932_- | SINE | Alu | Name=AluJo |
| ADediting_968941 | chr22_19450944_- | SINE | Alu | Name=AluJo |
| ADediting_968942 | chr22_19450953_- | SINE | Alu | Name=AluJo |
| ADediting_968943 | chr22_19450956_- | SINE | Alu | Name=AluJo |
| ADediting_968944 | chr22_19450961_- | SINE | Alu | Name=AluJo |
| ADediting_968945 | chr22_19450970_- | SINE | Alu | Name=AluJo |
| ADediting_968946 | chr22_19450992_- | SINE | Alu | Name=AluJo |
| ADediting_968947 | chr22_19450994_- | SINE | Alu | Name=AluJo |
| ADediting_968948 | chr22_19450996_- | SINE | Alu | Name=AluJo |
| ADediting_968949 | chr22_19451000_- | SINE | Alu | Name=AluJo |
| ADediting_968950 | chr22_19451012_- | SINE | Alu | Name=AluJo |
| ADediting_968951 | chr22_19451015_- | SINE | Alu | Name=AluJo |
| ADediting_968952 | chr22_19451016_- | SINE | Alu | Name=AluJo |
| ADediting_968953 | chr22_19451040_- | SINE | Alu | Name=AluJo |
| ADediting_968954 | chr22_19451041_- | SINE | Alu | Name=AluJo |
| ADediting_968955 | chr22_19451042_- | SINE | Alu | Name=AluJo |
| ADediting_968956 | chr22_19451055_- | SINE | Alu | Name=AluJo |
| ADediting_968957 | chr22_19451065_- | SINE | Alu | Name=AluJo |
| ADediting_968958 | chr22_19451077_- | SINE | Alu | Name=AluJo |
| ADediting_968960 | chr22_19452585_- | SINE | Alu | Name=AluJb |
| ADediting_968961 | chr22_19452592_- | SINE | Alu | Name=AluJb |
| ADediting_968962 | chr22_19452597_- | SINE | Alu | Name=AluJb |
| ADediting_968963 | chr22_19452640_- | SINE | Alu | Name=AluJb |
| ADediting_968964 | chr22_19452662_- | SINE | Alu | Name=AluJb |
| ADediting_968965 | chr22_19452664_- | SINE | Alu | Name=AluJb |
| ADediting_968966 | chr22_19452672_- | SINE | Alu | Name=AluJb |
| ADediting_968967 | chr22_19452724_- | SINE | Alu | Name=AluJb |
| ADediting_968968 | chr22_19452728_- | SINE | Alu | Name=AluJb |
| ADediting_968969 | chr22_19452738_- | SINE | Alu | Name=AluJb |
| ADediting_968970 | chr22_19452741_- | SINE | Alu | Name=AluJb |
| ADediting_968971 | chr22_19452749_- | SINE | Alu | Name=AluJb |
| ADediting_968972 | chr22_19452752_- | SINE | Alu | Name=AluJb |
| ADediting_968973 | chr22_19452757_- | SINE | Alu | Name=AluJb |
| ADediting_968974 | chr22_19452767_- | SINE | Alu | Name=AluJb |
| ADediting_968975 | chr22_19452791_- | SINE | Alu | Name=AluJb |
| ADediting_968976 | chr22_19452813_- | SINE | Alu | Name=AluJb |
| ADediting_968977 | chr22_19452819_- | SINE | Alu | Name=AluJb |
| ADediting_968978 | chr22_19452820_- | SINE | Alu | Name=AluJb |
| ADediting_968979 | chr22_19458512_- | SINE | Alu | Name=AluSx |
| ADediting_968980 | chr22_19458598_- | SINE | Alu | Name=AluSx |
| ADediting_968981 | chr22_19458608_- | SINE | Alu | Name=AluSx |
| ADediting_968982 | chr22_19459358_- | SINE | Alu | Name=AluY |
| ADediting_968983 | chr22_19459370_- | SINE | Alu | Name=AluY |
| ADediting_968984 | chr22_19459425_- | SINE | Alu | Name=AluY |
| ADediting_968985 | chr22_19459447_- | SINE | Alu | Name=AluY |
| ADediting_968986 | chr22_19459450_- | SINE | Alu | Name=AluY |
| ADediting_968987 | chr22_19459457_- | SINE | Alu | Name=AluY |
| ADediting_968988 | chr22_19459487_- | SINE | Alu | Name=AluY |
| ADediting_968989 | chr22_19459491_- | SINE | Alu | Name=AluY |
| ADediting_968990 | chr22_19459493_- | SINE | Alu | Name=AluY |
| ADediting_968991 | chr22_19459503_- | SINE | Alu | Name=AluY |
| ADediting_968992 | chr22_19459563_- | SINE | Alu | Name=AluY |
| ADediting_968993 | chr22_19459568_- | SINE | Alu | Name=AluY |
| ADediting_968994 | chr22_19459801_- | SINE | Alu | Name=AluSg |
| ADediting_968995 | chr22_19459806_- | SINE | Alu | Name=AluSg |
| ADediting_968996 | chr22_19459807_- | SINE | Alu | Name=AluSg |
| ADediting_968997 | chr22_19459849_- | SINE | Alu | Name=AluSg |
| ADediting_968998 | chr22_19459877_- | SINE | Alu | Name=AluSg |
| ADediting_968999 | chr22_19459883_- | SINE | Alu | Name=AluSg |
| ADediting_969000 | chr22_19459938_- | SINE | Alu | Name=AluSg |
| ADediting_969001 | chr22_19460009_- | SINE | Alu | Name=AluSg |
| ADediting_969002 | chr22_19460010_- | SINE | Alu | Name=AluSg |
| ADediting_969003 | chr22_19460884_- | SINE | Alu | Name=AluJo |
| ADediting_969004 | chr22_19461035_- | SINE | Alu | Name=AluJo |
| ADediting_969005 | chr22_19462071_- | SINE | Alu | Name=AluJb |
| ADediting_969006 | chr22_19462085_- | SINE | Alu | Name=AluJb |
| ADediting_969007 | chr22_19462102_- | SINE | Alu | Name=AluJb |
| ADediting_969008 | chr22_19462233_- | SINE | Alu | Name=AluJb |
| ADediting_969009 | chr22_19462281_- | SINE | Alu | Name=AluJb |
| ADediting_969010 | chr22_19462286_- | SINE | Alu | Name=AluJb |
| ADediting_969011 | chr22_19462421_- | SINE | Alu | Name=AluSx |
| ADediting_969012 | chr22_19462431_- | SINE | Alu | Name=AluSx |
| ADediting_969013 | chr22_19462449_- | SINE | Alu | Name=AluSx |
| ADediting_969014 | chr22_19462474_- | SINE | Alu | Name=AluSx |
| ADediting_969015 | chr22_19462486_- | SINE | Alu | Name=AluSx |
| ADediting_969016 | chr22_19462493_- | SINE | Alu | Name=AluSx |
| ADediting_969017 | chr22_19462503_- | SINE | Alu | Name=AluSx |
| ADediting_969018 | chr22_19462553_- | SINE | Alu | Name=AluSx |
| ADediting_969019 | chr22_19462556_- | SINE | Alu | Name=AluSx |
| ADediting_969020 | chr22_19462584_- | SINE | Alu | Name=AluSx |
| ADediting_969021 | chr22_19462601_- | SINE | Alu | Name=AluSx |
| ADediting_969022 | chr22_19462608_- | SINE | Alu | Name=AluSx |
| ADediting_969024 | chr22_19466595_- | SINE | Alu | Name=AluSx |
| ADediting_969025 | chr22_19466816_- | SINE | Alu | Name=AluSx |
| ADediting_1569631 | chr22_19450968_- | SINE | Alu | Name=AluJo |
| ADediting_1569632 | chr22_19451068_- | SINE | Alu | Name=AluJo |
| ADediting_1569633 | chr22_19452652_- | SINE | Alu | Name=AluJb |
| ADediting_1569634 | chr22_19452729_- | SINE | Alu | Name=AluJb |
| ADediting_1569635 | chr22_19462195_- | SINE | Alu | Name=AluJb |
| ADediting_1642083 | chr22_19462272_- | SINE | Alu | Name=AluJb |
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RNA A-to-I editing events in the alternative splicing sites for UFD1 |
RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for UFD1 |
Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.* The grey color means N/A. |
Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for UFD1 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for UFD1 |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000070010.19 | ENST00000263202.15 | UFD1-201 | hsa-miR-4477b | chr22 | 19450359 | 19450365 | 7mer-m8 | 19450358 | 19450377 | 149 | -14.19 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for UFD1 |
- RNA A-to-I editing in mRNA.* Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for UFD1 |
Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_968938 | chr22_19450919_- | 0.00116017899260355 | 0.26275989720847 | 0.00010234743570164 | 0.31186609898613 | 0.105357249535994 | 0.13274959784653 |
| CER | ADediting_968939 | chr22_19450931_- | 0.00382824326005766 | 0.234783291421406 | 2.84734068656754e-05 | 0.334626662297539 | 0.0213099373743056 | 0.187888344844071 |
| CER | ADediting_968940 | chr22_19450932_- | 0.0146912881011829 | 0.198886469156552 | 5.91359907399805e-06 | 0.360341439421119 | 0.00127826269383256 | 0.26059933043718 |
| CER | ADediting_968941 | chr22_19450944_- | 0.00815198517685593 | 0.215283099692049 | 3.16375525964238e-09 | 0.460056483198503 | 0.0199860777263402 | 0.189824218850234 |
| DLPFC | ADediting_968955 | chr22_19451042_- | 0.000112759001247977 | 0.217556704357903 | 9.17075000997763e-10 | 0.338804466056317 | 0.365213411138832 | -0.0516017540584405 |
| TCX | ADediting_968964 | chr22_19452662_- | 5.44392288784607e-05 | 0.323323421035598 | 0.000175412694825707 | 0.301705176614935 | 0.561752181145934 | 0.0477488763470308 |
| CER | ADediting_968967 | chr22_19452724_- | 0.0533240639290507 | 0.158099440427604 | 6.91010111993953e-05 | 0.319049329132928 | 0.98095793452314 | 0.00196524883984265 |
| TCX | ADediting_968969 | chr22_19452738_- | 0.358045505141926 | 0.0755686448056453 | 4.39782084113034e-06 | 0.364945442546061 | 0.00649921236511348 | -0.221296460006036 |
| CER | ADediting_968970 | chr22_19452741_- | 0.000941801453552196 | 0.267348438862472 | 7.44046974903442e-06 | 0.356720970351954 | 0.266379880749057 | 0.0913227130478754 |
| CER | ADediting_968971 | chr22_19452749_- | 0.0203605902116646 | 0.189265607068145 | 5.18011493184423e-05 | 0.324205647532504 | 0.387079962131926 | 0.0711263371980944 |
| CER | ADediting_968972 | chr22_19452752_- | 0.0183247847151094 | 0.192416855442343 | 1.64187961295441e-05 | 0.343893019660415 | 0.197116497795438 | 0.105902085812479 |
Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 7.88348705310142e-47 | 0.699346900692473 | 2.14228556993613e-46 | 0.69697196687175 | 1.40838249893812e-07 | 0.293556735463997 |
| AC | 2.32241151626911e-75 | 0.862619577354202 | 5.40187061792922e-48 | 0.758343836997551 | 2.24899134386785e-18 | 0.515509817135886 |
| PCC | 8.11819385513571e-21 | 0.60956751009356 | 3.29990422791067e-20 | 0.601880811319244 | 0.000605115546909929 | 0.245928616177884 |
| CER | 1.79794266385878e-27 | 0.741868591943957 | 3.22434186395898e-36 | 0.810615176656518 | 0.000155088598971536 | 0.304060452711588 |
| TCX | 9.84557371593657e-23 | 0.692395348429351 | 0.00017060378683202 | 0.302238582549149 | 3.51966522540164e-10 | 0.483949664875373 |
| FP | 1.62353593510385e-24 | 0.669650897197275 | 1.49513336580761e-25 | 0.680503070165476 | 8.55039812831425e-05 | 0.290133123403471 |
| IFG | 1.66988503522656e-05 | 0.748702712560279 | 8.76932299953064e-05 | 0.703398554266066 | 0.16036284464004 | 0.289537348616126 |
| PG | 2.53603469806773e-23 | 0.6456770691676 | 4.12808453278937e-19 | 0.593845253511903 | 0.00233268124681369 | 0.221920548577171 |
| STG | 8.894253055278e-15 | 0.72226934673447 | 3.28136737515738e-07 | 0.523238330321167 | 0.0208348843750661 | 0.251841592681055 |
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Relation with AD stages for UFD1 |
Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 5.97660645958182e-05 | 0.37630445896582 |
| TCX | 8.75698661566661e-07 | 0.456452368476327 |
| IFG | 0.031522173466933 | -0.430900164293948 |
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RelatedDrugs for UFD1 |
Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for UFD1 |
Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| UFD1 | C0036341 | Schizophrenia | 2 | PSYGENET |
| UFD1 | C0018798 | Congenital Heart Defects | 1 | CTD_human |
| UFD1 | C0376634 | Craniofacial Abnormalities | 1 | CTD_human |