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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for UBE2D3 |
 Gene summary |
| Gene information | Gene symbol | UBE2D3 | Gene ID | 7323 |
| Gene name | ubiquitin conjugating enzyme E2 D3 | |
| Synonyms | E2(17)KB3|UBC4/5|UBCH5C | |
| Cytomap | 4q24 | |
| Type of gene | protein-coding | |
| Description | ubiquitin-conjugating enzyme E2 D3(E3-independent) E2 ubiquitin-conjugating enzyme D3E2 ubiquitin-conjugating enzyme D3ubiquitin carrier protein D3ubiquitin conjugating enzyme E2D 3ubiquitin-conjugating enzyme E2(17)KB 3ubiquitin-conjugating enzyme | |
| Modification date | 20200313 | |
| UniProtAcc | P61077, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| UBE2D3 | GO:0000209 | protein polyubiquitination | 14765125|16522193 |
| UBE2D3 | GO:0006513 | protein monoubiquitination | 20347421 |
| UBE2D3 | GO:0016567 | protein ubiquitination | 9990509|21532592 |
| UBE2D3 | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | 20347421 |
| UBE2D3 | GO:0051865 | protein autoubiquitination | 21068390 |
| UBE2D3 | GO:0070936 | protein K48-linked ubiquitination | 20061386 |
| UBE2D3 | GO:0070979 | protein K11-linked ubiquitination | 20061386 |
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RNA A-to-I events for UBE2D3 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1101067(102804055, -), ADediting_1101068(102810468, -), ADediting_1101069(102810490, -), ADediting_1101070(102810497, -), ADediting_1101071(102810506, -), ADediting_1101072(102810512, -), ADediting_1101073(102810533, -), ADediting_1101074(102810541, -), ADediting_1101075(102810544, -), ADediting_1101076(102810545, -), ADediting_1101077(102810546, -), ADediting_1101078(102810547, -), ADediting_1101079(102810549, -), ADediting_1101080(102810551, -), ADediting_1101081(102810553, -), ADediting_1101082(102810561, -), ADediting_1101083(102810573, -), ADediting_1101084(102810578, -), ADediting_1101085(102810582, -), ADediting_1101086(102810583, -), ADediting_1101087(102810592, -), ADediting_1101088(102811087, -), ADediting_1101089(102811093, -), ADediting_1101090(102811099, -), ADediting_1101091(102811107, -), ADediting_1101092(102811130, -), ADediting_1101093(102811143, -), ADediting_1101094(102811144, -), ADediting_1101095(102811160, -), ADediting_1101096(102811183, -), ADediting_1101097(102811185, -), ADediting_1101098(102811187, -), ADediting_1101099(102811202, -), ADediting_1101100(102811211, -), ADediting_1101101(102811214, -), ADediting_1101102(102811218, -), ADediting_1101103(102811222, -), ADediting_1101104(102811230, -), ADediting_1101105(102811234, -), ADediting_1101106(102811237, -), ADediting_1101107(102811246, -), ADediting_1101108(102811251, -), ADediting_1101109(102811263, -), ADediting_1101110(102811264, -), ADediting_1101111(102811284, -), ADediting_1101112(102811289, -), ADediting_1101113(102811294, -), ADediting_1101114(102811302, -), ADediting_1101115(102811403, -), ADediting_1101116(102811425, -), ADediting_1101117(102811437, -), ADediting_1101118(102811438, -), ADediting_1101119(102811447, -), ADediting_1101120(102811456, -), ADediting_1101121(102811460, -), ADediting_1101122(102811477, -), ADediting_1101123(102811491, -), ADediting_1101124(102811494, -), ADediting_1101125(102811499, -), ADediting_1101126(102811516, -), ADediting_1101127(102811519, -), ADediting_1101128(102811533, -), ADediting_1101129(102811534, -), ADediting_1101130(102811557, -), ADediting_1101131(102811559, -), ADediting_1101132(102811569, -), ADediting_1101133(102811594, -), ADediting_1101134(102811598, -), ADediting_1101135(102811605, -), ADediting_1101136(102811619, -), ADediting_1101137(102811646, -), ADediting_1101138(102811658, -), ADediting_1101139(102811664, -), ADediting_1101140(102811666, -), ADediting_1101141(102811668, -), ADediting_1101142(102812171, -), ADediting_1101143(102812214, -), ADediting_1101144(102812216, -), ADediting_1101145(102812238, -), ADediting_1101146(102812268, -), ADediting_1101147(102812272, -), ADediting_1101148(102812273, -), ADediting_1101149(102813279, -), ADediting_1101150(102813297, -), ADediting_1101151(102813298, -), ADediting_1101152(102813302, -), ADediting_1101153(102813310, -), ADediting_1101154(102813311, -), ADediting_1101155(102813319, -), ADediting_1101156(102813324, -), ADediting_1101157(102813325, -), ADediting_1101158(102813331, -), ADediting_1101159(102813341, -), ADediting_1101160(102813685, -), ADediting_1101161(102822691, -), ADediting_1101162(102822701, -), ADediting_1101163(102822746, -), ADediting_1101164(102822771, -), ADediting_1101165(102822812, -), ADediting_1101166(102822814, -), ADediting_1101167(102822824, -), ADediting_1101168(102822873, -), ADediting_1101169(102822874, -), ADediting_1101170(102822884, -), ADediting_1101171(102844338, -), ADediting_1101172(102844373, -), ADediting_1101173(102846715, -), ADediting_1101174(102846930, -), ADediting_1101175(102847382, -), ADediting_1101176(102847424, -), ADediting_1101177(102847430, -), ADediting_1101178(102847559, -), ADediting_1101179(102847717, -), ADediting_1101180(102847736, -), ADediting_1101181(102847742, -), ADediting_1101182(102847781, -), ADediting_1101183(102847849, -), ADediting_1101184(102847877, -), ADediting_1101185(102847917, -), ADediting_1101186(102847935, -), ADediting_1101187(102849171, -), ADediting_1101188(102849242, -), ADediting_1101189(102849282, -), ADediting_1101190(102863118, -), ADediting_1101191(102863119, -), ADediting_1101192(102863162, -), ADediting_1101193(102863188, -), ADediting_1101194(102863250, -), ADediting_1101195(102863324, -), ADediting_1101196(102863767, -), ADediting_1101197(102865416, -), ADediting_1101198(102865432, -), ADediting_1101199(102865453, -), ADediting_1101200(102868149, -), ADediting_1101201(102868184, -), ADediting_1101202(102868201, -), ADediting_1101203(102868243, -), ADediting_1575910(102810612, -), ADediting_1575911(102811145, -), ADediting_1575912(102811259, -), ADediting_1575913(102811277, -), ADediting_1575914(102811308, -), ADediting_1575915(102811502, -), ADediting_1649581(102810477, -), ADediting_1649582(102812223, -), ADediting_1649583(102813265, -), ADediting_1649584(102849165, -), |
Top |
RNA editing positional annotations for UBE2D3 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1101067 | chr4_102804055_- | intronic |
| ADediting_1101068 | chr4_102810468_- | intronic |
| ADediting_1101069 | chr4_102810490_- | intronic |
| ADediting_1101070 | chr4_102810497_- | intronic |
| ADediting_1101071 | chr4_102810506_- | intronic |
| ADediting_1101072 | chr4_102810512_- | intronic |
| ADediting_1101073 | chr4_102810533_- | intronic |
| ADediting_1101074 | chr4_102810541_- | intronic |
| ADediting_1101075 | chr4_102810544_- | intronic |
| ADediting_1101076 | chr4_102810545_- | intronic |
| ADediting_1101077 | chr4_102810546_- | intronic |
| ADediting_1101078 | chr4_102810547_- | intronic |
| ADediting_1101079 | chr4_102810549_- | intronic |
| ADediting_1101080 | chr4_102810551_- | intronic |
| ADediting_1101081 | chr4_102810553_- | intronic |
| ADediting_1101082 | chr4_102810561_- | intronic |
| ADediting_1101083 | chr4_102810573_- | intronic |
| ADediting_1101084 | chr4_102810578_- | intronic |
| ADediting_1101085 | chr4_102810582_- | intronic |
| ADediting_1101086 | chr4_102810583_- | intronic |
| ADediting_1101087 | chr4_102810592_- | intronic |
| ADediting_1101088 | chr4_102811087_- | intronic |
| ADediting_1101089 | chr4_102811093_- | intronic |
| ADediting_1101090 | chr4_102811099_- | intronic |
| ADediting_1101091 | chr4_102811107_- | intronic |
| ADediting_1101092 | chr4_102811130_- | intronic |
| ADediting_1101093 | chr4_102811143_- | intronic |
| ADediting_1101094 | chr4_102811144_- | intronic |
| ADediting_1101095 | chr4_102811160_- | intronic |
| ADediting_1101096 | chr4_102811183_- | intronic |
| ADediting_1101097 | chr4_102811185_- | intronic |
| ADediting_1101098 | chr4_102811187_- | intronic |
| ADediting_1101099 | chr4_102811202_- | intronic |
| ADediting_1101100 | chr4_102811211_- | intronic |
| ADediting_1101101 | chr4_102811214_- | intronic |
| ADediting_1101102 | chr4_102811218_- | intronic |
| ADediting_1101103 | chr4_102811222_- | intronic |
| ADediting_1101104 | chr4_102811230_- | intronic |
| ADediting_1101105 | chr4_102811234_- | intronic |
| ADediting_1101106 | chr4_102811237_- | intronic |
| ADediting_1101107 | chr4_102811246_- | intronic |
| ADediting_1101108 | chr4_102811251_- | intronic |
| ADediting_1101109 | chr4_102811263_- | intronic |
| ADediting_1101110 | chr4_102811264_- | intronic |
| ADediting_1101111 | chr4_102811284_- | intronic |
| ADediting_1101112 | chr4_102811289_- | intronic |
| ADediting_1101113 | chr4_102811294_- | intronic |
| ADediting_1101114 | chr4_102811302_- | intronic |
| ADediting_1101115 | chr4_102811403_- | intronic |
| ADediting_1101116 | chr4_102811425_- | intronic |
| ADediting_1101117 | chr4_102811437_- | intronic |
| ADediting_1101118 | chr4_102811438_- | intronic |
| ADediting_1101119 | chr4_102811447_- | intronic |
| ADediting_1101120 | chr4_102811456_- | intronic |
| ADediting_1101121 | chr4_102811460_- | intronic |
| ADediting_1101122 | chr4_102811477_- | intronic |
| ADediting_1101123 | chr4_102811491_- | intronic |
| ADediting_1101124 | chr4_102811494_- | intronic |
| ADediting_1101125 | chr4_102811499_- | intronic |
| ADediting_1101126 | chr4_102811516_- | intronic |
| ADediting_1101127 | chr4_102811519_- | intronic |
| ADediting_1101128 | chr4_102811533_- | intronic |
| ADediting_1101129 | chr4_102811534_- | intronic |
| ADediting_1101130 | chr4_102811557_- | intronic |
| ADediting_1101131 | chr4_102811559_- | intronic |
| ADediting_1101132 | chr4_102811569_- | intronic |
| ADediting_1101133 | chr4_102811594_- | intronic |
| ADediting_1101134 | chr4_102811598_- | intronic |
| ADediting_1101135 | chr4_102811605_- | intronic |
| ADediting_1101136 | chr4_102811619_- | intronic |
| ADediting_1101137 | chr4_102811646_- | intronic |
| ADediting_1101138 | chr4_102811658_- | intronic |
| ADediting_1101139 | chr4_102811664_- | intronic |
| ADediting_1101140 | chr4_102811666_- | intronic |
| ADediting_1101141 | chr4_102811668_- | intronic |
| ADediting_1101142 | chr4_102812171_- | intronic |
| ADediting_1101143 | chr4_102812214_- | intronic |
| ADediting_1101144 | chr4_102812216_- | intronic |
| ADediting_1101145 | chr4_102812238_- | intronic |
| ADediting_1101146 | chr4_102812268_- | intronic |
| ADediting_1101147 | chr4_102812272_- | intronic |
| ADediting_1101148 | chr4_102812273_- | intronic |
| ADediting_1101149 | chr4_102813279_- | intronic |
| ADediting_1101150 | chr4_102813297_- | intronic |
| ADediting_1101151 | chr4_102813298_- | intronic |
| ADediting_1101152 | chr4_102813302_- | intronic |
| ADediting_1101153 | chr4_102813310_- | intronic |
| ADediting_1101154 | chr4_102813311_- | intronic |
| ADediting_1101155 | chr4_102813319_- | intronic |
| ADediting_1101156 | chr4_102813324_- | intronic |
| ADediting_1101157 | chr4_102813325_- | intronic |
| ADediting_1101158 | chr4_102813331_- | intronic |
| ADediting_1101159 | chr4_102813341_- | intronic |
| ADediting_1101160 | chr4_102813685_- | intronic |
| ADediting_1101161 | chr4_102822691_- | intronic |
| ADediting_1101162 | chr4_102822701_- | intronic |
| ADediting_1101163 | chr4_102822746_- | intronic |
| ADediting_1101164 | chr4_102822771_- | intronic |
| ADediting_1101165 | chr4_102822812_- | intronic |
| ADediting_1101166 | chr4_102822814_- | intronic |
| ADediting_1101167 | chr4_102822824_- | intronic |
| ADediting_1101168 | chr4_102822873_- | intronic |
| ADediting_1101169 | chr4_102822874_- | intronic |
| ADediting_1101170 | chr4_102822884_- | intronic |
| ADediting_1101171 | chr4_102844338_- | intronic |
| ADediting_1101172 | chr4_102844373_- | intronic |
| ADediting_1101173 | chr4_102846715_- | intronic |
| ADediting_1101174 | chr4_102846930_- | intronic |
| ADediting_1101175 | chr4_102847382_- | intronic |
| ADediting_1101176 | chr4_102847424_- | intronic |
| ADediting_1101177 | chr4_102847430_- | intronic |
| ADediting_1101178 | chr4_102847559_- | intronic |
| ADediting_1101179 | chr4_102847717_- | intronic |
| ADediting_1101180 | chr4_102847736_- | intronic |
| ADediting_1101181 | chr4_102847742_- | intronic |
| ADediting_1101182 | chr4_102847781_- | intronic |
| ADediting_1101183 | chr4_102847849_- | intronic |
| ADediting_1101184 | chr4_102847877_- | intronic |
| ADediting_1101185 | chr4_102847917_- | intronic |
| ADediting_1101186 | chr4_102847935_- | intronic |
| ADediting_1101187 | chr4_102849171_- | intronic |
| ADediting_1101188 | chr4_102849242_- | intronic |
| ADediting_1101189 | chr4_102849282_- | intronic |
| ADediting_1101190 | chr4_102863118_- | intronic |
| ADediting_1101191 | chr4_102863119_- | intronic |
| ADediting_1101192 | chr4_102863162_- | intronic |
| ADediting_1101193 | chr4_102863188_- | intronic |
| ADediting_1101194 | chr4_102863250_- | intronic |
| ADediting_1101195 | chr4_102863324_- | intronic |
| ADediting_1101196 | chr4_102863767_- | intronic |
| ADediting_1101197 | chr4_102865416_- | intronic |
| ADediting_1101198 | chr4_102865432_- | intronic |
| ADediting_1101199 | chr4_102865453_- | intronic |
| ADediting_1101200 | chr4_102868149_- | intronic |
| ADediting_1101201 | chr4_102868184_- | intronic |
| ADediting_1101202 | chr4_102868201_- | intronic |
| ADediting_1101203 | chr4_102868243_- | intronic |
| ADediting_1575910 | chr4_102810612_- | intronic |
| ADediting_1575911 | chr4_102811145_- | intronic |
| ADediting_1575912 | chr4_102811259_- | intronic |
| ADediting_1575913 | chr4_102811277_- | intronic |
| ADediting_1575914 | chr4_102811308_- | intronic |
| ADediting_1575915 | chr4_102811502_- | intronic |
| ADediting_1649581 | chr4_102810477_- | intronic |
| ADediting_1649582 | chr4_102812223_- | intronic |
| ADediting_1649583 | chr4_102813265_- | intronic |
| ADediting_1649584 | chr4_102849165_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1101067 | chr4_102804055_- | SINE | Alu | Name=AluSg |
| ADediting_1101068 | chr4_102810468_- | SINE | Alu | Name=AluY |
| ADediting_1101069 | chr4_102810490_- | SINE | Alu | Name=AluY |
| ADediting_1101070 | chr4_102810497_- | SINE | Alu | Name=AluY |
| ADediting_1101071 | chr4_102810506_- | SINE | Alu | Name=AluY |
| ADediting_1101072 | chr4_102810512_- | SINE | Alu | Name=AluY |
| ADediting_1101073 | chr4_102810533_- | SINE | Alu | Name=AluY |
| ADediting_1101074 | chr4_102810541_- | SINE | Alu | Name=AluY |
| ADediting_1101075 | chr4_102810544_- | SINE | Alu | Name=AluY |
| ADediting_1101076 | chr4_102810545_- | SINE | Alu | Name=AluY |
| ADediting_1101077 | chr4_102810546_- | SINE | Alu | Name=AluY |
| ADediting_1101078 | chr4_102810547_- | SINE | Alu | Name=AluY |
| ADediting_1101079 | chr4_102810549_- | SINE | Alu | Name=AluY |
| ADediting_1101080 | chr4_102810551_- | SINE | Alu | Name=AluY |
| ADediting_1101081 | chr4_102810553_- | SINE | Alu | Name=AluY |
| ADediting_1101082 | chr4_102810561_- | SINE | Alu | Name=AluY |
| ADediting_1101083 | chr4_102810573_- | SINE | Alu | Name=AluY |
| ADediting_1101084 | chr4_102810578_- | SINE | Alu | Name=AluY |
| ADediting_1101085 | chr4_102810582_- | SINE | Alu | Name=AluY |
| ADediting_1101086 | chr4_102810583_- | SINE | Alu | Name=AluY |
| ADediting_1101087 | chr4_102810592_- | SINE | Alu | Name=AluY |
| ADediting_1101088 | chr4_102811087_- | SINE | Alu | Name=AluJo |
| ADediting_1101089 | chr4_102811093_- | SINE | Alu | Name=AluJo |
| ADediting_1101090 | chr4_102811099_- | SINE | Alu | Name=AluJo |
| ADediting_1101091 | chr4_102811107_- | SINE | Alu | Name=AluJo |
| ADediting_1101092 | chr4_102811130_- | SINE | Alu | Name=AluJo |
| ADediting_1101093 | chr4_102811143_- | SINE | Alu | Name=AluJo |
| ADediting_1101094 | chr4_102811144_- | SINE | Alu | Name=AluJo |
| ADediting_1101095 | chr4_102811160_- | SINE | Alu | Name=AluJo |
| ADediting_1101096 | chr4_102811183_- | SINE | Alu | Name=AluJo |
| ADediting_1101097 | chr4_102811185_- | SINE | Alu | Name=AluJo |
| ADediting_1101098 | chr4_102811187_- | SINE | Alu | Name=AluJo |
| ADediting_1101099 | chr4_102811202_- | SINE | Alu | Name=AluJo |
| ADediting_1101100 | chr4_102811211_- | SINE | Alu | Name=AluJo |
| ADediting_1101101 | chr4_102811214_- | SINE | Alu | Name=AluJo |
| ADediting_1101102 | chr4_102811218_- | SINE | Alu | Name=AluJo |
| ADediting_1101103 | chr4_102811222_- | SINE | Alu | Name=AluJo |
| ADediting_1101104 | chr4_102811230_- | SINE | Alu | Name=AluJo |
| ADediting_1101105 | chr4_102811234_- | SINE | Alu | Name=AluJo |
| ADediting_1101106 | chr4_102811237_- | SINE | Alu | Name=AluJo |
| ADediting_1101107 | chr4_102811246_- | SINE | Alu | Name=AluJo |
| ADediting_1101108 | chr4_102811251_- | SINE | Alu | Name=AluJo |
| ADediting_1101109 | chr4_102811263_- | SINE | Alu | Name=AluJo |
| ADediting_1101110 | chr4_102811264_- | SINE | Alu | Name=AluJo |
| ADediting_1101111 | chr4_102811284_- | SINE | Alu | Name=AluJo |
| ADediting_1101112 | chr4_102811289_- | SINE | Alu | Name=AluJo |
| ADediting_1101113 | chr4_102811294_- | SINE | Alu | Name=AluJo |
| ADediting_1101114 | chr4_102811302_- | SINE | Alu | Name=AluJo |
| ADediting_1101115 | chr4_102811403_- | SINE | Alu | Name=AluSx |
| ADediting_1101116 | chr4_102811425_- | SINE | Alu | Name=AluSx |
| ADediting_1101117 | chr4_102811437_- | SINE | Alu | Name=AluSx |
| ADediting_1101118 | chr4_102811438_- | SINE | Alu | Name=AluSx |
| ADediting_1101119 | chr4_102811447_- | SINE | Alu | Name=AluSx |
| ADediting_1101120 | chr4_102811456_- | SINE | Alu | Name=AluSx |
| ADediting_1101121 | chr4_102811460_- | SINE | Alu | Name=AluSx |
| ADediting_1101122 | chr4_102811477_- | SINE | Alu | Name=AluSx |
| ADediting_1101123 | chr4_102811491_- | SINE | Alu | Name=AluSx |
| ADediting_1101124 | chr4_102811494_- | SINE | Alu | Name=AluSx |
| ADediting_1101125 | chr4_102811499_- | SINE | Alu | Name=AluSx |
| ADediting_1101126 | chr4_102811516_- | SINE | Alu | Name=AluSx |
| ADediting_1101127 | chr4_102811519_- | SINE | Alu | Name=AluSx |
| ADediting_1101128 | chr4_102811533_- | SINE | Alu | Name=AluSx |
| ADediting_1101129 | chr4_102811534_- | SINE | Alu | Name=AluSx |
| ADediting_1101130 | chr4_102811557_- | SINE | Alu | Name=AluSx |
| ADediting_1101131 | chr4_102811559_- | SINE | Alu | Name=AluSx |
| ADediting_1101132 | chr4_102811569_- | SINE | Alu | Name=AluSx |
| ADediting_1101133 | chr4_102811594_- | SINE | Alu | Name=AluSx |
| ADediting_1101134 | chr4_102811598_- | SINE | Alu | Name=AluSx |
| ADediting_1101135 | chr4_102811605_- | SINE | Alu | Name=AluSx |
| ADediting_1101136 | chr4_102811619_- | SINE | Alu | Name=AluSx |
| ADediting_1101137 | chr4_102811646_- | SINE | Alu | Name=AluSx |
| ADediting_1101138 | chr4_102811658_- | SINE | Alu | Name=AluSx |
| ADediting_1101139 | chr4_102811664_- | SINE | Alu | Name=AluSx |
| ADediting_1101140 | chr4_102811666_- | SINE | Alu | Name=AluSx |
| ADediting_1101141 | chr4_102811668_- | SINE | Alu | Name=AluSx |
| ADediting_1101142 | chr4_102812171_- | SINE | Alu | Name=FAM |
| ADediting_1101143 | chr4_102812214_- | SINE | Alu | Name=FAM |
| ADediting_1101144 | chr4_102812216_- | SINE | Alu | Name=FAM |
| ADediting_1101145 | chr4_102812238_- | SINE | Alu | Name=FAM |
| ADediting_1101146 | chr4_102812268_- | SINE | Alu | Name=FAM |
| ADediting_1101147 | chr4_102812272_- | SINE | Alu | Name=FAM |
| ADediting_1101148 | chr4_102812273_- | SINE | Alu | Name=FAM |
| ADediting_1101149 | chr4_102813279_- | srpRNA | srpRNA | Name=7SLRNA |
| ADediting_1101150 | chr4_102813297_- | srpRNA | srpRNA | Name=7SLRNA |
| ADediting_1101151 | chr4_102813298_- | srpRNA | srpRNA | Name=7SLRNA |
| ADediting_1101152 | chr4_102813302_- | srpRNA | srpRNA | Name=7SLRNA |
| ADediting_1101153 | chr4_102813310_- | srpRNA | srpRNA | Name=7SLRNA |
| ADediting_1101154 | chr4_102813311_- | srpRNA | srpRNA | Name=7SLRNA |
| ADediting_1101155 | chr4_102813319_- | srpRNA | srpRNA | Name=7SLRNA |
| ADediting_1101156 | chr4_102813324_- | srpRNA | srpRNA | Name=7SLRNA |
| ADediting_1101157 | chr4_102813325_- | srpRNA | srpRNA | Name=7SLRNA |
| ADediting_1101158 | chr4_102813331_- | srpRNA | srpRNA | Name=7SLRNA |
| ADediting_1101159 | chr4_102813341_- | srpRNA | srpRNA | Name=7SLRNA |
| ADediting_1101160 | chr4_102813685_- | LINE | L2 | Name=L2 |
| ADediting_1101161 | chr4_102822691_- | SINE | Alu | Name=AluY |
| ADediting_1101162 | chr4_102822701_- | SINE | Alu | Name=AluY |
| ADediting_1101163 | chr4_102822746_- | SINE | Alu | Name=AluY |
| ADediting_1101164 | chr4_102822771_- | SINE | Alu | Name=AluY |
| ADediting_1101165 | chr4_102822812_- | SINE | Alu | Name=AluY |
| ADediting_1101166 | chr4_102822814_- | SINE | Alu | Name=AluY |
| ADediting_1101167 | chr4_102822824_- | SINE | Alu | Name=AluY |
| ADediting_1101168 | chr4_102822873_- | SINE | Alu | Name=AluY |
| ADediting_1101169 | chr4_102822874_- | SINE | Alu | Name=AluY |
| ADediting_1101170 | chr4_102822884_- | SINE | Alu | Name=AluY |
| ADediting_1101171 | chr4_102844338_- | SINE | Alu | Name=AluJr |
| ADediting_1101172 | chr4_102844373_- | SINE | Alu | Name=AluJr |
| ADediting_1101173 | chr4_102846715_- | SINE | Alu | Name=AluJo |
| ADediting_1101174 | chr4_102846930_- | SINE | Alu | Name=AluJo |
| ADediting_1101175 | chr4_102847382_- | SINE | Alu | Name=AluSz6 |
| ADediting_1101176 | chr4_102847424_- | SINE | Alu | Name=AluSz6 |
| ADediting_1101177 | chr4_102847430_- | SINE | Alu | Name=AluSz6 |
| ADediting_1101178 | chr4_102847559_- | SINE | Alu | Name=AluSz6 |
| ADediting_1101179 | chr4_102847717_- | SINE | Alu | Name=AluJr |
| ADediting_1101180 | chr4_102847736_- | SINE | Alu | Name=AluJr |
| ADediting_1101181 | chr4_102847742_- | SINE | Alu | Name=AluJr |
| ADediting_1101182 | chr4_102847781_- | SINE | Alu | Name=AluJr |
| ADediting_1101183 | chr4_102847849_- | SINE | Alu | Name=AluJr |
| ADediting_1101184 | chr4_102847877_- | SINE | Alu | Name=AluJr |
| ADediting_1101185 | chr4_102847917_- | SINE | Alu | Name=AluJr |
| ADediting_1101186 | chr4_102847935_- | SINE | Alu | Name=AluJr |
| ADediting_1101187 | chr4_102849171_- | SINE | Alu | Name=AluJb |
| ADediting_1101188 | chr4_102849242_- | SINE | Alu | Name=AluJb |
| ADediting_1101189 | chr4_102849282_- | SINE | Alu | Name=AluJb |
| ADediting_1101190 | chr4_102863118_- | SINE | Alu | Name=AluSx |
| ADediting_1101191 | chr4_102863119_- | SINE | Alu | Name=AluSx |
| ADediting_1101192 | chr4_102863162_- | SINE | Alu | Name=AluSx |
| ADediting_1101193 | chr4_102863188_- | SINE | Alu | Name=AluSx |
| ADediting_1101194 | chr4_102863250_- | SINE | Alu | Name=AluSx |
| ADediting_1101195 | chr4_102863324_- | SINE | Alu | Name=AluSx |
| ADediting_1101196 | chr4_102863767_- | SINE | Alu | Name=AluSz |
| ADediting_1101197 | chr4_102865416_- | SINE | Alu | Name=AluSg4 |
| ADediting_1101198 | chr4_102865432_- | SINE | Alu | Name=AluSg4 |
| ADediting_1101199 | chr4_102865453_- | SINE | Alu | Name=AluSg4 |
| ADediting_1101200 | chr4_102868149_- | SINE | Alu | Name=AluSg4 |
| ADediting_1101201 | chr4_102868184_- | SINE | Alu | Name=AluSg4 |
| ADediting_1101202 | chr4_102868201_- | SINE | Alu | Name=AluSg4 |
| ADediting_1101203 | chr4_102868243_- | SINE | Alu | Name=AluSg4 |
| ADediting_1575910 | chr4_102810612_- | SINE | Alu | Name=AluY |
| ADediting_1575911 | chr4_102811145_- | SINE | Alu | Name=AluJo |
| ADediting_1575912 | chr4_102811259_- | SINE | Alu | Name=AluJo |
| ADediting_1575913 | chr4_102811277_- | SINE | Alu | Name=AluJo |
| ADediting_1575914 | chr4_102811308_- | SINE | Alu | Name=AluJo |
| ADediting_1575915 | chr4_102811502_- | SINE | Alu | Name=AluSx |
| ADediting_1649581 | chr4_102810477_- | SINE | Alu | Name=AluY |
| ADediting_1649582 | chr4_102812223_- | SINE | Alu | Name=FAM |
| ADediting_1649583 | chr4_102813265_- | srpRNA | srpRNA | Name=7SLRNA |
| ADediting_1649584 | chr4_102849165_- | SINE | Alu | Name=AluJb |
Top |
RNA A-to-I editing events in the alternative splicing sites for UBE2D3 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for UBE2D3 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for UBE2D3 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for UBE2D3 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000109332.20 | ENST00000394804.6 | UBE2D3-209 | hsa-miR-4477b | chr4 | 102795281 | 102795287 | 7mer-m8 | 102795280 | 102795302 | 154 | -16.45 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000109332.20 | ENST00000453744.7 | UBE2D3-210 | hsa-miR-4477b | chr4 | 102795281 | 102795287 | 7mer-m8 | 102795280 | 102795302 | 154 | -16.45 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000109332.20 | ENST00000618836.4 | UBE2D3-233 | hsa-miR-4477b | chr4 | 102795281 | 102795287 | 7mer-m8 | 102795280 | 102795302 | 154 | -16.45 |
| ADediting_286380 | chr11_79422188_- | ENSG00000109332.20 | ENST00000394804.6 | UBE2D3-209 | hsa-miR-5579-3p | chr4 | 102795119 | 102795125 | 7mer-m8 | 102795118 | 102795146 | 147 | -18.74 |
| ADediting_286380 | chr11_79422188_- | ENSG00000109332.20 | ENST00000453744.7 | UBE2D3-210 | hsa-miR-5579-3p | chr4 | 102795119 | 102795125 | 7mer-m8 | 102795118 | 102795146 | 147 | -18.74 |
| ADediting_286380 | chr11_79422188_- | ENSG00000109332.20 | ENST00000618836.4 | UBE2D3-233 | hsa-miR-5579-3p | chr4 | 102795119 | 102795125 | 7mer-m8 | 102795118 | 102795146 | 147 | -18.74 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000109332.20 | ENST00000321805.11 | UBE2D3-201 | hsa-miR-5585-3p | chr4 | 102797272 | 102797278 | 7mer-m8 | 102797271 | 102797292 | 151 | -16.84 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000109332.20 | ENST00000338145.7 | UBE2D3-202 | hsa-miR-5585-3p | chr4 | 102797272 | 102797278 | 7mer-m8 | 102797271 | 102797292 | 151 | -16.84 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000109332.20 | ENST00000343106.9 | UBE2D3-203 | hsa-miR-5585-3p | chr4 | 102797272 | 102797278 | 7mer-m8 | 102797271 | 102797292 | 151 | -16.84 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000109332.20 | ENST00000349311.12 | UBE2D3-204 | hsa-miR-5585-3p | chr4 | 102797272 | 102797278 | 7mer-m8 | 102797271 | 102797292 | 151 | -16.84 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000109332.20 | ENST00000350435.11 | UBE2D3-205 | hsa-miR-5585-3p | chr4 | 102797272 | 102797278 | 7mer-m8 | 102797271 | 102797292 | 151 | -16.84 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000109332.20 | ENST00000394801.8 | UBE2D3-207 | hsa-miR-5585-3p | chr4 | 102797272 | 102797278 | 7mer-m8 | 102797271 | 102797292 | 151 | -16.84 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000109332.20 | ENST00000394803.9 | UBE2D3-208 | hsa-miR-5585-3p | chr4 | 102797272 | 102797278 | 7mer-m8 | 102797271 | 102797292 | 151 | -16.84 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000109332.20 | ENST00000394804.6 | UBE2D3-209 | hsa-miR-5585-3p | chr4 | 102797272 | 102797278 | 7mer-m8 | 102797271 | 102797292 | 151 | -16.84 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000109332.20 | ENST00000453744.7 | UBE2D3-210 | hsa-miR-5585-3p | chr4 | 102797272 | 102797278 | 7mer-m8 | 102797271 | 102797292 | 151 | -16.84 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000109332.20 | ENST00000618836.4 | UBE2D3-233 | hsa-miR-5585-3p | chr4 | 102797272 | 102797278 | 7mer-m8 | 102797271 | 102797292 | 151 | -16.84 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000109332.20 | ENST00000394804.6 | UBE2D3-209 | hsa-miR-5688 | chr4 | 102794667 | 102794673 | 7mer-m8 | 102794666 | 102794687 | 154 | -9.74 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000109332.20 | ENST00000394804.6 | UBE2D3-209 | hsa-miR-5688 | chr4 | 102794818 | 102794824 | 7mer-m8 | 102794817 | 102794842 | 148 | -10.29 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000109332.20 | ENST00000453744.7 | UBE2D3-210 | hsa-miR-5688 | chr4 | 102794667 | 102794673 | 7mer-m8 | 102794666 | 102794687 | 154 | -9.74 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000109332.20 | ENST00000453744.7 | UBE2D3-210 | hsa-miR-5688 | chr4 | 102794818 | 102794824 | 7mer-m8 | 102794817 | 102794842 | 148 | -10.29 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000109332.20 | ENST00000618836.4 | UBE2D3-233 | hsa-miR-5688 | chr4 | 102794667 | 102794673 | 7mer-m8 | 102794666 | 102794687 | 154 | -9.74 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000109332.20 | ENST00000618836.4 | UBE2D3-233 | hsa-miR-5688 | chr4 | 102794818 | 102794824 | 7mer-m8 | 102794817 | 102794842 | 148 | -10.29 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000109332.20 | ENST00000394804.6 | UBE2D3-209 | hsa-miR-589-3p | chr4 | 102795607 | 102795613 | 7mer-m8 | 102795606 | 102795629 | 144 | -13.26 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000109332.20 | ENST00000453744.7 | UBE2D3-210 | hsa-miR-589-3p | chr4 | 102795607 | 102795613 | 7mer-m8 | 102795606 | 102795629 | 144 | -13.26 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000109332.20 | ENST00000618836.4 | UBE2D3-233 | hsa-miR-589-3p | chr4 | 102795607 | 102795613 | 7mer-m8 | 102795606 | 102795629 | 144 | -13.26 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000109332.20 | ENST00000394804.6 | UBE2D3-209 | hsa-miR-337-3p | chr4 | 102794946 | 102794952 | 7mer-m8 | 102794945 | 102794965 | 152 | -10.83 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000109332.20 | ENST00000453744.7 | UBE2D3-210 | hsa-miR-337-3p | chr4 | 102794946 | 102794952 | 7mer-m8 | 102794945 | 102794965 | 152 | -10.83 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000109332.20 | ENST00000618836.4 | UBE2D3-233 | hsa-miR-337-3p | chr4 | 102794946 | 102794952 | 7mer-m8 | 102794945 | 102794965 | 152 | -10.83 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000109332.20 | ENST00000343106.9 | UBE2D3-203 | hsa-miR-381-3p | chr4 | 102796521 | 102796527 | 7mer-1a | 102796521 | 102796542 | 142 | -14.09 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000109332.20 | ENST00000394801.8 | UBE2D3-207 | hsa-miR-381-3p | chr4 | 102796521 | 102796527 | 7mer-1a | 102796521 | 102796542 | 142 | -14.09 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000109332.20 | ENST00000394803.9 | UBE2D3-208 | hsa-miR-381-3p | chr4 | 102796521 | 102796527 | 7mer-1a | 102796521 | 102796542 | 142 | -14.09 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000109332.20 | ENST00000394804.6 | UBE2D3-209 | hsa-miR-381-3p | chr4 | 102796521 | 102796527 | 7mer-1a | 102796521 | 102796542 | 142 | -14.09 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000109332.20 | ENST00000453744.7 | UBE2D3-210 | hsa-miR-381-3p | chr4 | 102796521 | 102796527 | 7mer-1a | 102796521 | 102796542 | 142 | -14.09 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000109332.20 | ENST00000618836.4 | UBE2D3-233 | hsa-miR-381-3p | chr4 | 102796521 | 102796527 | 7mer-1a | 102796521 | 102796542 | 142 | -14.09 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000109332.20 | ENST00000343106.9 | UBE2D3-203 | hsa-miR-381-3p | chr4 | 102796521 | 102796527 | 7mer-1a | 102796521 | 102796542 | 142 | -14.09 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000109332.20 | ENST00000394801.8 | UBE2D3-207 | hsa-miR-381-3p | chr4 | 102796521 | 102796527 | 7mer-1a | 102796521 | 102796542 | 142 | -14.09 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000109332.20 | ENST00000394803.9 | UBE2D3-208 | hsa-miR-381-3p | chr4 | 102796521 | 102796527 | 7mer-1a | 102796521 | 102796542 | 142 | -14.09 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000109332.20 | ENST00000394804.6 | UBE2D3-209 | hsa-miR-381-3p | chr4 | 102796521 | 102796527 | 7mer-1a | 102796521 | 102796542 | 142 | -14.09 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000109332.20 | ENST00000453744.7 | UBE2D3-210 | hsa-miR-381-3p | chr4 | 102796521 | 102796527 | 7mer-1a | 102796521 | 102796542 | 142 | -14.09 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000109332.20 | ENST00000618836.4 | UBE2D3-233 | hsa-miR-381-3p | chr4 | 102796521 | 102796527 | 7mer-1a | 102796521 | 102796542 | 142 | -14.09 |
| ADediting_286380 | chr11_79422188_- | ENSG00000109332.20 | ENST00000343106.9 | UBE2D3-203 | hsa-miR-5579-3p | chr4 | 102796375 | 102796381 | 7mer-m8 | 102796374 | 102796395 | 142 | -7.8 |
| ADediting_286380 | chr11_79422188_- | ENSG00000109332.20 | ENST00000394801.8 | UBE2D3-207 | hsa-miR-5579-3p | chr4 | 102796375 | 102796381 | 7mer-m8 | 102796374 | 102796395 | 142 | -7.8 |
| ADediting_286380 | chr11_79422188_- | ENSG00000109332.20 | ENST00000394803.9 | UBE2D3-208 | hsa-miR-5579-3p | chr4 | 102796375 | 102796381 | 7mer-m8 | 102796374 | 102796395 | 142 | -7.8 |
| ADediting_286380 | chr11_79422188_- | ENSG00000109332.20 | ENST00000394804.6 | UBE2D3-209 | hsa-miR-5579-3p | chr4 | 102796375 | 102796381 | 7mer-m8 | 102796374 | 102796395 | 142 | -7.8 |
| ADediting_286380 | chr11_79422188_- | ENSG00000109332.20 | ENST00000453744.7 | UBE2D3-210 | hsa-miR-5579-3p | chr4 | 102796375 | 102796381 | 7mer-m8 | 102796374 | 102796395 | 142 | -7.8 |
| ADediting_286380 | chr11_79422188_- | ENSG00000109332.20 | ENST00000618836.4 | UBE2D3-233 | hsa-miR-5579-3p | chr4 | 102796375 | 102796381 | 7mer-m8 | 102796374 | 102796395 | 142 | -7.8 |
| ADediting_527135 | chr16_24203190_+ | ENSG00000109332.20 | ENST00000394804.6 | UBE2D3-209 | hsa-miR-1273h-3p | chr4 | 102795745 | 102795751 | 7mer-m8 | 102795744 | 102795765 | 140 | -11.75 |
| ADediting_527135 | chr16_24203190_+ | ENSG00000109332.20 | ENST00000453744.7 | UBE2D3-210 | hsa-miR-1273h-3p | chr4 | 102795745 | 102795751 | 7mer-m8 | 102795744 | 102795765 | 140 | -11.75 |
| ADediting_527135 | chr16_24203190_+ | ENSG00000109332.20 | ENST00000618836.4 | UBE2D3-233 | hsa-miR-1273h-3p | chr4 | 102795745 | 102795751 | 7mer-m8 | 102795744 | 102795765 | 140 | -11.75 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000109332.20 | ENST00000394804.6 | UBE2D3-209 | hsa-miR-4775 | chr4 | 102795388 | 102795394 | 7mer-m8 | 102795387 | 102795409 | 143 | -3.84 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000109332.20 | ENST00000453744.7 | UBE2D3-210 | hsa-miR-4775 | chr4 | 102795388 | 102795394 | 7mer-m8 | 102795387 | 102795409 | 143 | -3.84 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000109332.20 | ENST00000618836.4 | UBE2D3-233 | hsa-miR-4775 | chr4 | 102795388 | 102795394 | 7mer-m8 | 102795387 | 102795409 | 143 | -3.84 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for UBE2D3 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for UBE2D3 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1101074 | chr4_102810541_- | 4.2109118178974e-08 | 0.429307416073586 | 5.47367243845343e-08 | 0.426014623792402 | 0.00452926687940571 | 0.230578985838428 |
| TCX | ADediting_1101074 | chr4_102810541_- | 2.65989322243134e-08 | 0.434991922142487 | 6.1659045977971e-09 | 0.452416614691365 | 0.584774961963106 | -0.0449688856901889 |
| TCX | ADediting_1101075 | chr4_102810544_- | 0.067349085293469 | 0.149774033837756 | 3.55540895960128e-05 | 0.33080325280284 | 0.130383749963168 | -0.124062685916175 |
| TCX | ADediting_1101084 | chr4_102810578_- | 0.0227916805299438 | 0.185840899688114 | 0.000183903030131817 | 0.300795810779284 | 0.163173579713324 | -0.114441495986776 |
| CER | ADediting_1101085 | chr4_102810582_- | 1.19309835728795e-07 | 0.416019508656439 | 0.00305933984008769 | 0.240279780079096 | 0.803786421555819 | -0.0204548311337375 |
| TCX | ADediting_1101085 | chr4_102810582_- | 4.40283814374742e-08 | 0.428750308309392 | 1.47755957814371e-06 | 0.381316206836222 | 0.319675030958588 | -0.0817997249170985 |
| TCX | ADediting_1101086 | chr4_102810583_- | 0.000557046616053787 | 0.278561638728245 | 0.000116344903166272 | 0.309481804334325 | 0.376367108733036 | -0.0727408570828512 |
| DLPFC | ADediting_1101088 | chr4_102811087_- | 2.80078084433953e-06 | 0.262466064633587 | 3.53027896613461e-10 | 0.346605336457801 | 0.203253656081714 | -0.0724615433985733 |
| CER | ADediting_1101088 | chr4_102811087_- | 4.02713030245303e-09 | 0.457315453810064 | 3.81398245568312e-12 | 0.528035599309292 | 0.000346122055460787 | 0.288331737317919 |
| TCX | ADediting_1101088 | chr4_102811087_- | 0.000639881402151425 | 0.275647140868195 | 2.28649385352631e-07 | 0.407419674969318 | 0.409772287956322 | -0.0677930025630648 |
| CER | ADediting_1101090 | chr4_102811099_- | 5.48917042138272e-09 | 0.453761277898 | 1.99685999940059e-12 | 0.533853223205072 | 0.0020548025832568 | 0.249749002248276 |
| TCX | ADediting_1101090 | chr4_102811099_- | 2.8666565682956e-06 | 0.371475683695791 | 7.23897021774605e-09 | 0.45055126852262 | 0.903289563448265 | -0.0100044391694224 |
| CER | ADediting_1101101 | chr4_102811214_- | 3.72420597048738e-07 | 0.400808003977461 | 7.23206600489928e-10 | 0.476314761452059 | 1.54508963801181e-06 | 0.380662663509312 |
| CER | ADediting_1101104 | chr4_102811230_- | 1.52206640373362e-13 | 0.555949844954369 | 1.07858534238319e-14 | 0.577091533822972 | 1.23832001832991e-05 | 0.348529305419874 |
| TCX | ADediting_1101104 | chr4_102811230_- | 5.5323491238683e-08 | 0.425880008462582 | 2.62717449016708e-07 | 0.405551780853063 | 0.465355121721141 | -0.0600575071619741 |
| CER | ADediting_1101105 | chr4_102811234_- | 1.1568670163075e-10 | 0.495388064841396 | 2.55812616377595e-14 | 0.570357869451817 | 0.00141303851574799 | 0.25834581985193 |
| TCX | ADediting_1101105 | chr4_102811234_- | 1.76635407820883e-08 | 0.43997097205416 | 7.50909591227337e-10 | 0.475911037142726 | 0.0202571360818162 | -0.189419023143837 |
| CER | ADediting_1101108 | chr4_102811251_- | 1.87647886786755e-14 | 0.57279168112904 | 2.79761427148708e-16 | 0.603966236197293 | 0.000957123103334266 | 0.266996210652096 |
| TCX | ADediting_1101108 | chr4_102811251_- | 3.16993384702802e-10 | 0.485043718136459 | 4.70961302918725e-13 | 0.546451996435411 | 0.142461428621702 | -0.120325464163402 |
| CER | ADediting_1101109 | chr4_102811263_- | 1.32974322277544e-09 | 0.469708018065157 | 2.6277260461268e-09 | 0.462148970973056 | 0.00177420619836389 | 0.253154530770799 |
| TCX | ADediting_1101109 | chr4_102811263_- | 3.32783325761218e-07 | 0.402345887860472 | 2.48213299763943e-06 | 0.373641753583777 | 0.344447612787737 | -0.0777260794794035 |
| STG | ADediting_1101109 | chr4_102811263_- | 0.102367820562287 | 0.179466262508408 | 0.00265249548282974 | 0.323879451757959 | 0.0947979117039656 | -0.183477211592015 |
| CER | ADediting_1101110 | chr4_102811264_- | 1.1024399551097e-10 | 0.495874051585922 | 2.96103019871004e-09 | 0.460804540414907 | 0.000237799948402154 | 0.29579800129919 |
| TCX | ADediting_1101110 | chr4_102811264_- | 7.79278587926341e-06 | 0.355986314247765 | 1.00041464273408e-07 | 0.418307461199349 | 0.545146562082796 | -0.0497878750293056 |
| TCX | ADediting_1101111 | chr4_102811284_- | 5.43985317615651e-06 | 0.361646833116856 | 3.32905192788205e-06 | 0.369210018906976 | 0.190010721001877 | -0.10759491195861 |
| CER | ADediting_1101113 | chr4_102811294_- | 3.32197892902408e-07 | 0.402369889219747 | 3.85966616110618e-09 | 0.457799694800764 | 0.00140478406107162 | 0.258478072660621 |
| TCX | ADediting_1101113 | chr4_102811294_- | 9.3748477376079e-05 | 0.313486847634348 | 8.46330331320256e-08 | 0.420464465638327 | 0.364418350739658 | -0.0745751259082863 |
| CER | ADediting_1101116 | chr4_102811425_- | 6.1695918607877e-10 | 0.478015505264527 | 2.21220779777278e-11 | 0.511649123081402 | 0.137823453775281 | 0.121730886447506 |
| TCX | ADediting_1101117 | chr4_102811437_- | 0.000478862136897863 | 0.281705302643912 | 2.63163626550422e-05 | 0.335970878185891 | 0.122068109567399 | -0.126793313854256 |
| CER | ADediting_1101119 | chr4_102811447_- | 4.05435553311527e-11 | 0.50579335822376 | 1.06778169551345e-14 | 0.577169126470824 | 0.0215122377588795 | 0.187601716130543 |
| CER | ADediting_1101120 | chr4_102811456_- | 3.27161358397001e-08 | 0.432443464707334 | 3.925601014671e-10 | 0.482804459803907 | 0.428807720549549 | 0.0650798446642763 |
| TCX | ADediting_1101120 | chr4_102811456_- | 2.23572417063685e-06 | 0.375204419015871 | 2.96989235731673e-05 | 0.333905053916435 | 0.600420181000406 | -0.043108527235578 |
| CER | ADediting_1101124 | chr4_102811494_- | 2.23867358107367e-13 | 0.552739289301764 | 4.11161089460634e-12 | 0.527352811929379 | 0.00739414903245807 | 0.217891344781461 |
| TCX | ADediting_1101124 | chr4_102811494_- | 6.78008553482572e-05 | 0.319392109457638 | 0.00639609539560113 | 0.221715228078549 | 0.298100991427822 | 0.0855172886245231 |
| TCX | ADediting_1101126 | chr4_102811516_- | 0.000201561797717457 | 0.299023293708488 | 0.000122141926641891 | 0.308572048129653 | 0.519226341339374 | -0.0530329358677665 |
| CER | ADediting_1101127 | chr4_102811519_- | 6.54766091349867e-09 | 0.451719508640794 | 2.04178553044693e-07 | 0.408933639234104 | 0.0833651612716702 | 0.141846083234415 |
| TCX | ADediting_1101127 | chr4_102811519_- | 0.00395899348440793 | 0.233949343437886 | 0.000190820369652243 | 0.300083355841859 | 0.157775881936424 | -0.115918125292915 |
| CER | ADediting_1101130 | chr4_102811557_- | 1.03854155635094e-06 | 0.38642326628089 | 1.06845237969044e-07 | 0.417454784843778 | 0.0806940848539116 | 0.143077467967983 |
| CER | ADediting_1101131 | chr4_102811559_- | 8.02512437809639e-11 | 0.499057390949187 | 2.26166983384789e-15 | 0.588892666708952 | 0.000799970761721434 | 0.270884707039969 |
| TCX | ADediting_1101131 | chr4_102811559_- | 2.87562588651732e-05 | 0.334457555284744 | 3.24670530257395e-11 | 0.507953647800238 | 0.197130626946013 | -0.105898764275775 |
| CER | ADediting_1101132 | chr4_102811569_- | 4.36220357488771e-16 | 0.60082777731969 | 2.09952636863013e-17 | 0.621602725339035 | 0.000655795365558272 | 0.27512735373034 |
| TCX | ADediting_1101132 | chr4_102811569_- | 2.76981639776021e-06 | 0.371993933946962 | 4.31534530934318e-11 | 0.505183962931356 | 0.196575295927568 | -0.106029443781066 |
| CER | ADediting_1101134 | chr4_102811598_- | 1.07916452902709e-06 | 0.38587163810722 | 4.73864840784929e-08 | 0.42782935916245 | 0.329626734554858 | 0.0801397706742195 |
| TCX | ADediting_1101134 | chr4_102811598_- | 3.92668857966302e-06 | 0.366688403136876 | 7.64054096376196e-06 | 0.356299840017533 | 0.146949569370871 | -0.118998172724788 |
| DLPFC | ADediting_1101135 | chr4_102811605_- | 2.22883148524217e-09 | 0.33134753818366 | 3.18563860655644e-16 | 0.4415350349385 | 0.468477325640467 | 0.0413242392441398 |
| CER | ADediting_1101135 | chr4_102811605_- | 2.36120349805477e-12 | 0.532357106305233 | 1.11444949392659e-12 | 0.539002933782311 | 0.00613166208324315 | 0.222817256919957 |
| TCX | ADediting_1101135 | chr4_102811605_- | 8.91138820856698e-06 | 0.353845997238789 | 1.13525950356479e-11 | 0.517971347674603 | 0.0221159667236877 | -0.186759919859912 |
| STG | ADediting_1101135 | chr4_102811605_- | 0.0101481459556598 | 0.279075833188776 | 0.000893162249983279 | 0.355868450028015 | 0.91539833638148 | -0.0117667666133676 |
| CER | ADediting_1101136 | chr4_102811619_- | 1.20991950695916e-14 | 0.576204448629976 | 3.24694606212972e-13 | 0.549612297352514 | 0.000909463820034293 | 0.268109430774519 |
| TCX | ADediting_1101136 | chr4_102811619_- | 2.16763417756359e-07 | 0.408134598646749 | 0.000132685176285849 | 0.30701613050482 | 0.162415333472528 | 0.114646700410623 |
| IFG | ADediting_1101136 | chr4_102811619_- | 0.0352381072719272 | 0.422789253479398 | 0.00921781920196954 | 0.509896330899064 | 0.0673024838403001 | 0.371721587709677 |
| STG | ADediting_1101136 | chr4_102811619_- | 0.120534045299299 | 0.170707433769281 | 0.00336041432891508 | 0.3164572869568 | 0.182301824609484 | -0.146929140758927 |
| DLPFC | ADediting_1101138 | chr4_102811658_- | 6.87618223913036e-06 | 0.252314515569616 | 6.46670546489169e-08 | 0.301069524926773 | 0.257406145129255 | 0.064517728463359 |
| CER | ADediting_1101138 | chr4_102811658_- | 2.42530728356327e-06 | 0.37398860827659 | 0.000122301277860295 | 0.308547613817312 | 0.788035049281737 | -0.0221350584655785 |
| CER | ADediting_1101139 | chr4_102811664_- | 1.07710315622782e-09 | 0.472009673487508 | 1.25645268147549e-05 | 0.348292165763541 | 0.121756204322581 | 0.126898495320808 |
| TCX | ADediting_1101139 | chr4_102811664_- | 2.19404495569263e-07 | 0.407972557167421 | 0.000989989453085899 | 0.266257760311289 | 0.200041792823181 | 0.10521804139178 |
| DLPFC | ADediting_1101142 | chr4_102812171_- | 0.000199319543480738 | 0.209766918817549 | 8.5502937530283e-09 | 0.319661223139583 | 0.765486047099806 | -0.0170089063536375 |
| CER | ADediting_1101142 | chr4_102812171_- | 3.66972198251568e-07 | 0.401009853342442 | 0.013856442437539 | 0.200568495637643 | 0.222211318106942 | 0.100254578906404 |
| TCX | ADediting_1101142 | chr4_102812171_- | 1.04712680859116e-09 | 0.472316694002475 | 8.595837207022e-09 | 0.448541406575805 | 0.191559247610289 | -0.107222127776214 |
| FP | ADediting_1101142 | chr4_102812171_- | 2.58460424945736e-05 | 0.309740797869154 | 5.01188843312306e-06 | 0.334554800505023 | 0.641561675783716 | 0.0351286495517768 |
| STG | ADediting_1101142 | chr4_102812171_- | 0.000734674789262863 | 0.361272476181731 | 2.77105676113999e-05 | 0.440333590372392 | 0.24524149217813 | -0.128179817024212 |
| DLPFC | ADediting_1101147 | chr4_102812272_- | 2.06891537256755e-05 | 0.239245447790722 | 8.98526631859932e-09 | 0.319220246672916 | 0.146580544095501 | -0.0826446928141282 |
| CER | ADediting_1101147 | chr4_102812272_- | 6.12108360028643e-05 | 0.321230284053622 | 0.0941903631512206 | 0.137157466124705 | 0.276322264521223 | -0.0894553082547478 |
| TCX | ADediting_1101147 | chr4_102812272_- | 8.84854444362832e-11 | 0.498081656580975 | 1.94633696774517e-08 | 0.438798013616212 | 0.391384821276317 | -0.0704851781742833 |
| FP | ADediting_1101147 | chr4_102812272_- | 1.66965800433308e-06 | 0.350050881467043 | 1.94568095947794e-07 | 0.378169805872627 | 0.741854840625336 | -0.0248607616509127 |
| STG | ADediting_1101147 | chr4_102812272_- | 0.00416886368036745 | 0.309529180435956 | 0.000414301884271638 | 0.376598745608926 | 0.0360167233874499 | -0.22915285535164 |
| DLPFC | ADediting_1101150 | chr4_102813297_- | 2.82170611116101e-08 | 0.308846337173109 | 3.18897723977179e-07 | 0.285428666659644 | 0.852432999258067 | -0.0106074964765258 |
| CER | ADediting_1101150 | chr4_102813297_- | 1.75517496096699e-07 | 0.410945079756853 | 2.46063786101524e-07 | 0.406433938004624 | 0.000749572783346571 | 0.272281427271337 |
| TCX | ADediting_1101150 | chr4_102813297_- | 9.88728701409192e-10 | 0.472939972317509 | 7.06943951406696e-06 | 0.357531134671784 | 0.74487516183176 | -0.0267884719310576 |
| DLPFC | ADediting_1101151 | chr4_102813298_- | 6.0882410432166e-08 | 0.301642777510054 | 3.07052362865466e-06 | 0.261446047971367 | 0.936186581053002 | 0.00456573423686671 |
| CER | ADediting_1101151 | chr4_102813298_- | 1.1483396659869e-12 | 0.538740537600425 | 6.47360158450655e-13 | 0.543722071965868 | 0.00523176767066438 | 0.226915285510829 |
| TCX | ADediting_1101151 | chr4_102813298_- | 6.1621102527668e-07 | 0.393829703186347 | 6.39231089347404e-05 | 0.320452303135057 | 0.180959387605824 | -0.109819477615158 |
| CER | ADediting_1101156 | chr4_102813324_- | 7.61903757396342e-14 | 0.56162354474586 | 2.31642614666811e-06 | 0.374675333525827 | 0.0129086977619832 | 0.202588909105894 |
| TCX | ADediting_1101156 | chr4_102813324_- | 2.36185310887571e-09 | 0.46334500555727 | 5.60438105557977e-05 | 0.322806227513534 | 0.739753172926669 | 0.027346091158504 |
| CER | ADediting_1101157 | chr4_102813325_- | 5.72448314045956e-08 | 0.425448605333561 | 0.0207840353609648 | 0.188644595630951 | 0.907503478338636 | -0.00956652915585331 |
| TCX | ADediting_1101157 | chr4_102813325_- | 9.69815681189496e-12 | 0.51944523641966 | 1.4139962496491e-07 | 0.413796809685346 | 0.827904041767424 | -0.017898163817918 |
| CER | ADediting_1101158 | chr4_102813331_- | 3.01226492814383e-06 | 0.370726921712612 | 0.00944786859323167 | 0.211283762838403 | 0.853999824631505 | 0.0151508372655078 |
| TCX | ADediting_1101158 | chr4_102813331_- | 1.3999216020065e-08 | 0.442763623273456 | 3.36698749139174e-08 | 0.432088026816143 | 0.0901774893044151 | -0.138842816401615 |
| TCX | ADediting_1101159 | chr4_102813341_- | 0.000150335806182126 | 0.304652609126929 | 0.00158072090231347 | 0.255801294467793 | 0.460855730507589 | -0.0606635959252083 |
| DLPFC | ADediting_1101160 | chr4_102813685_- | 8.01810261110028e-07 | 0.275939258043397 | 2.51440973108371e-09 | 0.330319602959537 | 0.473520345469588 | -0.0408574549642766 |
| TCX | ADediting_1101160 | chr4_102813685_- | 5.47916272700035e-10 | 0.479279782220053 | 2.19939916651089e-06 | 0.375448516936145 | 0.851525186830694 | -0.0154106007722722 |
| STG | ADediting_1101160 | chr4_102813685_- | 0.00385528789309995 | 0.312060907526846 | 0.00289127695471147 | 0.321196221468603 | 0.655878844615052 | -0.0493295877112495 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 9.75662482900293e-57 | 0.747824612038655 | 4.05750740898209e-35 | 0.625892453866523 | 0.0690957983346318 | 0.103384529204516 |
| AC | 5.34811455021333e-67 | 0.837375570569936 | 2.80278485973628e-34 | 0.672579135912729 | 1.17658060595931e-21 | 0.5556505086848 |
| PCC | 7.3077507463209e-33 | 0.728390128079061 | 1.21857772968616e-30 | 0.71032620193732 | 0.0056418074709081 | 0.199569799688125 |
| CER | 3.01057258890848e-30 | 0.76642117810963 | 6.95070359034682e-29 | 0.754724211502328 | 0.000265332697865102 | 0.293639825149224 |
| TCX | 6.09838604537211e-43 | 0.849501573056579 | 6.78710105424538e-08 | 0.423287941687676 | 2.40599151124215e-07 | 0.406735880662118 |
| FP | 1.14879875209562e-19 | 0.611905954164353 | 2.03406009190097e-24 | 0.668600924885658 | 0.527722888877894 | 0.0476406216225118 |
| IFG | 1.0667923182448e-05 | 0.759530794547825 | 0.000341705210734053 | 0.6588629217672 | 0.848424417949273 | 0.0402721888760184 |
| PG | 2.25223920642354e-54 | 0.85506678426589 | 1.09297599898206e-25 | 0.670965950309942 | 0.930137680715059 | -0.00647195689762491 |
| STG | 6.93433725089121e-15 | 0.724249858986213 | 9.59710254438514e-11 | 0.633951883500879 | 0.329127799341575 | -0.107780785572113 |
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Relation with AD stages for UBE2D3 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1101104 | chr4_102811230_- | 1.38671041136904e-06 | 0.445129880923845 |
| CER | ADediting_1101105 | chr4_102811234_- | 0.000262642642710713 | 0.344384705084863 |
| CER | ADediting_1101108 | chr4_102811251_- | 7.07686881283253e-07 | 0.455984477649778 |
| CER | ADediting_1101119 | chr4_102811447_- | 1.13263191255979e-05 | 0.408606433224433 |
| CER | ADediting_1101122 | chr4_102811477_- | 0.00130857434614368 | 0.305405771210775 |
| CER | ADediting_1101131 | chr4_102811559_- | 6.45152850568695e-05 | 0.374735103671682 |
| CER | ADediting_1101132 | chr4_102811569_- | 2.47680340335527e-05 | 0.393829765414031 |
| CER | ADediting_1101135 | chr4_102811605_- | 9.38120740105068e-05 | 0.366932844888462 |
| CER | ADediting_1101150 | chr4_102813297_- | 0.00094769262476345 | 0.313665333231054 |
| CER | ADediting_1101151 | chr4_102813298_- | 0.000404133129589267 | 0.33441989607792 |
| TCX | ADediting_1101090 | chr4_102811099_- | 0.000661800427891616 | 0.325520613780973 |
| TCX | ADediting_1101124 | chr4_102811494_- | 0.00168007744786778 | 0.301580790693431 |
| TCX | ADediting_1101136 | chr4_102811619_- | 9.91079548313604e-05 | 0.369038170125009 |
| TCX | ADediting_1101141 | chr4_102811668_- | 0.000367422787846881 | 0.339694052329474 |
| IFG | ADediting_1101074 | chr4_102810541_- | 0.0469911664332386 | 0.400955231950133 |
| IFG | ADediting_1101086 | chr4_102810583_- | 0.047711197790397 | 0.399764275964639 |
| IFG | ADediting_1101109 | chr4_102811263_- | 0.014134513032895 | 0.484400249848936 |
| IFG | ADediting_1101110 | chr4_102811264_- | 0.0353488225216572 | 0.42255826357712 |
| PG | ADediting_1101142 | chr4_102812171_- | 1.13153226244295e-05 | -0.315771706205197 |
| PG | ADediting_1101157 | chr4_102813325_- | 2.43599978092213e-05 | -0.304159223682291 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 9.49658941709127e-06 | 0.411839548093044 |
| TCX | 3.78775158476e-07 | 0.469690954661046 |
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RelatedDrugs for UBE2D3 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for UBE2D3 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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