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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for TCTA |
 Gene summary |
| Gene information | Gene symbol | TCTA | Gene ID | 6988 |
| Gene name | T cell leukemia translocation altered | |
| Synonyms | - | |
| Cytomap | 3p21.31 | |
| Type of gene | protein-coding | |
| Description | T-cell leukemia translocation-altered gene proteinT-cell leukemia translocation-associated gene protein | |
| Modification date | 20200313 | |
| UniProtAcc | P57738, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| TCTA | GO:0045671 | negative regulation of osteoclast differentiation | 19560569 |
| TCTA | GO:0072675 | osteoclast fusion | 19560569 |
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RNA A-to-I events for TCTA |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_1075676(49414058, +), ADediting_1075677(49414309, +), ADediting_1075678(49414413, +), ADediting_1075679(49414414, +), ADediting_1075680(49415239, +), ADediting_1075681(49415253, +), ADediting_1075682(49415261, +), ADediting_1075683(49415262, +), ADediting_1075684(49415267, +), ADediting_1075685(49415268, +), ADediting_1075686(49415288, +), ADediting_1075687(49415292, +), ADediting_1075688(49415305, +), ADediting_1075689(49415340, +), ADediting_1075690(49415345, +), ADediting_1075691(49415351, +), ADediting_1075692(49415354, +), ADediting_1075693(49415355, +), ADediting_1075694(49415356, +), ADediting_1075695(49415357, +), ADediting_1075696(49415358, +), ADediting_1075697(49415363, +), ADediting_1075698(49415364, +), ADediting_1075699(49415365, +), ADediting_1075700(49415366, +), ADediting_1075701(49415369, +), ADediting_1075702(49415385, +), ADediting_1075703(49415387, +), ADediting_1075704(49415389, +), ADediting_1075705(49415392, +), ADediting_1075706(49415395, +), ADediting_1075707(49415396, +), ADediting_1075708(49415409, +), ADediting_1075709(49415419, +), ADediting_1075710(49415422, +), ADediting_1075711(49415444, +), ADediting_1075712(49415448, +), ADediting_1075713(49415457, +), ADediting_1075714(49415465, +), ADediting_1075715(49415466, +), ADediting_1075716(49415468, +), ADediting_1075717(49415486, +), ADediting_1574961(49415300, +), ADediting_1574962(49415329, +), ADediting_1574963(49415437, +), ADediting_1647868(49415362, +), ADediting_1647869(49415503, +), |
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RNA editing positional annotations for TCTA using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1075676 | chr3_49414058_+ | intronic |
| ADediting_1075677 | chr3_49414309_+ | intronic |
| ADediting_1075678 | chr3_49414413_+ | intronic |
| ADediting_1075679 | chr3_49414414_+ | intronic |
| ADediting_1075680 | chr3_49415239_+ | UTR3 |
| ADediting_1075681 | chr3_49415253_+ | UTR3 |
| ADediting_1075682 | chr3_49415261_+ | UTR3 |
| ADediting_1075683 | chr3_49415262_+ | UTR3 |
| ADediting_1075684 | chr3_49415267_+ | UTR3 |
| ADediting_1075685 | chr3_49415268_+ | UTR3 |
| ADediting_1075686 | chr3_49415288_+ | UTR3 |
| ADediting_1075687 | chr3_49415292_+ | UTR3 |
| ADediting_1075688 | chr3_49415305_+ | UTR3 |
| ADediting_1075689 | chr3_49415340_+ | UTR3 |
| ADediting_1075690 | chr3_49415345_+ | UTR3 |
| ADediting_1075691 | chr3_49415351_+ | UTR3 |
| ADediting_1075692 | chr3_49415354_+ | UTR3 |
| ADediting_1075693 | chr3_49415355_+ | UTR3 |
| ADediting_1075694 | chr3_49415356_+ | UTR3 |
| ADediting_1075695 | chr3_49415357_+ | UTR3 |
| ADediting_1075696 | chr3_49415358_+ | UTR3 |
| ADediting_1075697 | chr3_49415363_+ | UTR3 |
| ADediting_1075698 | chr3_49415364_+ | UTR3 |
| ADediting_1075699 | chr3_49415365_+ | UTR3 |
| ADediting_1075700 | chr3_49415366_+ | UTR3 |
| ADediting_1075701 | chr3_49415369_+ | UTR3 |
| ADediting_1075702 | chr3_49415385_+ | UTR3 |
| ADediting_1075703 | chr3_49415387_+ | UTR3 |
| ADediting_1075704 | chr3_49415389_+ | UTR3 |
| ADediting_1075705 | chr3_49415392_+ | UTR3 |
| ADediting_1075706 | chr3_49415395_+ | UTR3 |
| ADediting_1075707 | chr3_49415396_+ | UTR3 |
| ADediting_1075708 | chr3_49415409_+ | UTR3 |
| ADediting_1075709 | chr3_49415419_+ | UTR3 |
| ADediting_1075710 | chr3_49415422_+ | UTR3 |
| ADediting_1075711 | chr3_49415444_+ | UTR3 |
| ADediting_1075712 | chr3_49415448_+ | UTR3 |
| ADediting_1075713 | chr3_49415457_+ | UTR3 |
| ADediting_1075714 | chr3_49415465_+ | UTR3 |
| ADediting_1075715 | chr3_49415466_+ | UTR3 |
| ADediting_1075716 | chr3_49415468_+ | UTR3 |
| ADediting_1075717 | chr3_49415486_+ | UTR3 |
| ADediting_1574961 | chr3_49415300_+ | UTR3 |
| ADediting_1574962 | chr3_49415329_+ | UTR3 |
| ADediting_1574963 | chr3_49415437_+ | UTR3 |
| ADediting_1647868 | chr3_49415362_+ | UTR3 |
| ADediting_1647869 | chr3_49415503_+ | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1075676 | chr3_49414058_+ | SINE | Alu | Name=AluSz |
| ADediting_1075677 | chr3_49414309_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1075678 | chr3_49414413_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1075679 | chr3_49414414_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1075680 | chr3_49415239_+ | SINE | Alu | Name=AluSg |
| ADediting_1075681 | chr3_49415253_+ | SINE | Alu | Name=AluSg |
| ADediting_1075682 | chr3_49415261_+ | SINE | Alu | Name=AluSg |
| ADediting_1075683 | chr3_49415262_+ | SINE | Alu | Name=AluSg |
| ADediting_1075684 | chr3_49415267_+ | SINE | Alu | Name=AluSg |
| ADediting_1075685 | chr3_49415268_+ | SINE | Alu | Name=AluSg |
| ADediting_1075686 | chr3_49415288_+ | SINE | Alu | Name=AluSg |
| ADediting_1075687 | chr3_49415292_+ | SINE | Alu | Name=AluSg |
| ADediting_1075688 | chr3_49415305_+ | SINE | Alu | Name=AluSg |
| ADediting_1075689 | chr3_49415340_+ | SINE | Alu | Name=AluSg |
| ADediting_1075690 | chr3_49415345_+ | SINE | Alu | Name=AluSg |
| ADediting_1075691 | chr3_49415351_+ | SINE | Alu | Name=AluSg |
| ADediting_1075692 | chr3_49415354_+ | SINE | Alu | Name=AluSg |
| ADediting_1075693 | chr3_49415355_+ | SINE | Alu | Name=AluSg |
| ADediting_1075694 | chr3_49415356_+ | SINE | Alu | Name=AluSg |
| ADediting_1075695 | chr3_49415357_+ | SINE | Alu | Name=AluSg |
| ADediting_1075696 | chr3_49415358_+ | SINE | Alu | Name=AluSg |
| ADediting_1075697 | chr3_49415363_+ | SINE | Alu | Name=AluSg |
| ADediting_1075698 | chr3_49415364_+ | SINE | Alu | Name=AluSg |
| ADediting_1075699 | chr3_49415365_+ | SINE | Alu | Name=AluSg |
| ADediting_1075700 | chr3_49415366_+ | SINE | Alu | Name=AluSg |
| ADediting_1075701 | chr3_49415369_+ | SINE | Alu | Name=AluSg |
| ADediting_1075702 | chr3_49415385_+ | SINE | Alu | Name=AluSg |
| ADediting_1075703 | chr3_49415387_+ | SINE | Alu | Name=AluSg |
| ADediting_1075704 | chr3_49415389_+ | SINE | Alu | Name=AluSg |
| ADediting_1075705 | chr3_49415392_+ | SINE | Alu | Name=AluSg |
| ADediting_1075706 | chr3_49415395_+ | SINE | Alu | Name=AluSg |
| ADediting_1075707 | chr3_49415396_+ | SINE | Alu | Name=AluSg |
| ADediting_1075708 | chr3_49415409_+ | SINE | Alu | Name=AluSg |
| ADediting_1075709 | chr3_49415419_+ | SINE | Alu | Name=AluSg |
| ADediting_1075710 | chr3_49415422_+ | SINE | Alu | Name=AluSg |
| ADediting_1075711 | chr3_49415444_+ | SINE | Alu | Name=AluSg |
| ADediting_1075712 | chr3_49415448_+ | SINE | Alu | Name=AluSg |
| ADediting_1075713 | chr3_49415457_+ | SINE | Alu | Name=AluSg |
| ADediting_1075714 | chr3_49415465_+ | SINE | Alu | Name=AluSg |
| ADediting_1075715 | chr3_49415466_+ | SINE | Alu | Name=AluSg |
| ADediting_1075716 | chr3_49415468_+ | SINE | Alu | Name=AluSg |
| ADediting_1075717 | chr3_49415486_+ | SINE | Alu | Name=AluSg |
| ADediting_1574961 | chr3_49415300_+ | SINE | Alu | Name=AluSg |
| ADediting_1574962 | chr3_49415329_+ | SINE | Alu | Name=AluSg |
| ADediting_1574963 | chr3_49415437_+ | SINE | Alu | Name=AluSg |
| ADediting_1647868 | chr3_49415362_+ | SINE | Alu | Name=AluSg |
| ADediting_1647869 | chr3_49415503_+ | SINE | Alu | Name=AluSg |
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RNA A-to-I editing events in the alternative splicing sites for TCTA |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TCTA |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for TCTA |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for TCTA |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1075681 | chr3_49415253_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4634 | chr3 | 49415250 | 49415256 | 7mer-m8 | 49415239 | 49415257 | 150 | -21.75 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-513a-5p | chr3 | 49415255 | 49415261 | 7mer-m8 | 49415245 | 49415262 | 144 | -16.68 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-638 | chr3 | 49415260 | 49415266 | 7mer-1a | 49415242 | 49415266 | 159 | -35.77 |
| ADediting_1075683 | chr3_49415262_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-8052 | chr3 | 49415260 | 49415266 | 7mer-1a | 49415248 | 49415266 | 140 | -24.15 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-302a-3p | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415252 | 49415273 | 143 | -14.98 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-302b-3p | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415251 | 49415273 | 141 | -9.83 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-302c-3p | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415253 | 49415273 | 145 | -11.96 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-302d-3p | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415246 | 49415273 | 148 | -13.74 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-302e | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415257 | 49415273 | 141 | -8.62 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-372-3p | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415246 | 49415273 | 155 | -20.46 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-373-3p | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415250 | 49415273 | 164 | -22.25 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-512-3p | chr3 | 49415265 | 49415271 | 7mer-m8 | 49415251 | 49415272 | 149 | -15.51 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-520a-3p | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415252 | 49415273 | 140 | -11.03 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-520b-3p | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415254 | 49415273 | 141 | -16.52 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-520c-3p | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415253 | 49415273 | 146 | -16.52 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-520d-3p | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415252 | 49415273 | 140 | -15.12 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-520e-3p | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415253 | 49415273 | 140 | -13.32 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6506-5p | chr3 | 49415261 | 49415267 | 7mer-m8 | 49415246 | 49415268 | 144 | -13.78 |
| ADediting_1075686 | chr3_49415288_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4707-3p | chr3 | 49415284 | 49415291 | 8mer-1a | 49415270 | 49415291 | 162 | -27.57 |
| ADediting_1075687 | chr3_49415292_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4485-5p | chr3 | 49415286 | 49415293 | 8mer-1a | 49415277 | 49415293 | 157 | -26.74 |
| ADediting_1075690 | chr3_49415345_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-483-5p | chr3 | 49415341 | 49415347 | 7mer-m8 | 49415327 | 49415348 | 140 | -14.01 |
| ADediting_1075691 | chr3_49415351_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-374b-3p | chr3 | 49415348 | 49415355 | 8mer-1a | 49415332 | 49415355 | 151 | -11.83 |
| ADediting_1075691 | chr3_49415351_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4756-3p | chr3 | 49415344 | 49415350 | 7mer-m8 | 49415331 | 49415351 | 152 | -16.99 |
| ADediting_1075692 | chr3_49415354_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-222-5p | chr3 | 49415348 | 49415355 | 8mer-1a | 49415335 | 49415355 | 141 | -9.81 |
| ADediting_1075692 | chr3_49415354_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-30a-3p | chr3 | 49415350 | 49415357 | 8mer-1a | 49415332 | 49415357 | 158 | -12.16 |
| ADediting_1075692 | chr3_49415354_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-30d-3p | chr3 | 49415350 | 49415357 | 8mer-1a | 49415335 | 49415357 | 153 | -12.1 |
| ADediting_1075692 | chr3_49415354_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-30e-3p | chr3 | 49415350 | 49415357 | 8mer-1a | 49415332 | 49415357 | 158 | -13.61 |
| ADediting_1075692 | chr3_49415354_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-936 | chr3 | 49415347 | 49415354 | 8mer-1a | 49415331 | 49415354 | 151 | -22.07 |
| ADediting_1075693 | chr3_49415355_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-325 | chr3 | 49415348 | 49415355 | 8mer-1a | 49415333 | 49415355 | 145 | -9.91 |
| ADediting_1075694 | chr3_49415356_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-630 | chr3 | 49415354 | 49415361 | 8mer-1a | 49415341 | 49415361 | 158 | -15.14 |
| ADediting_1075697 | chr3_49415363_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4742-3p | chr3 | 49415356 | 49415363 | 8mer-1a | 49415341 | 49415363 | 142 | -9.18 |
| ADediting_1075698 | chr3_49415364_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-578 | chr3 | 49415359 | 49415365 | 7mer-m8 | 49415346 | 49415366 | 148 | -9.14 |
| ADediting_1075698 | chr3_49415364_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-643 | chr3 | 49415357 | 49415364 | 8mer-1a | 49415342 | 49415364 | 147 | -12.1 |
| ADediting_1075699 | chr3_49415365_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6844 | chr3 | 49415359 | 49415365 | 7mer-m8 | 49415345 | 49415366 | 155 | -7.49 |
| ADediting_1075706 | chr3_49415395_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-638 | chr3 | 49415394 | 49415400 | 7mer-1a | 49415376 | 49415400 | 155 | -28.82 |
| ADediting_1075706 | chr3_49415395_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-653-3p | chr3 | 49415389 | 49415395 | 7mer-m8 | 49415375 | 49415396 | 160 | -17.33 |
| ADediting_1075709 | chr3_49415419_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6747-3p | chr3 | 49415417 | 49415424 | 8mer-1a | 49415402 | 49415424 | 149 | -23.42 |
| ADediting_1075711 | chr3_49415444_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-1913 | chr3 | 49415442 | 49415449 | 8mer-1a | 49415428 | 49415449 | 148 | -21.45 |
| ADediting_1075711 | chr3_49415444_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-361-3p | chr3 | 49415438 | 49415444 | 7mer-m8 | 49415424 | 49415445 | 155 | -23.38 |
| ADediting_1075712 | chr3_49415448_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-1281 | chr3 | 49415441 | 49415447 | 7mer-m8 | 49415432 | 49415448 | 141 | -17.01 |
| ADediting_1075714 | chr3_49415465_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4638-5p | chr3 | 49415460 | 49415467 | 8mer-1a | 49415448 | 49415467 | 146 | -20.28 |
| ADediting_1075715 | chr3_49415466_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-149-5p | chr3 | 49415459 | 49415465 | 7mer-m8 | 49415444 | 49415466 | 152 | -22.11 |
| ADediting_1075716 | chr3_49415468_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-212-5p | chr3 | 49415461 | 49415467 | 7mer-m8 | 49415449 | 49415468 | 158 | -26.27 |
| ADediting_1075716 | chr3_49415468_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6813-3p | chr3 | 49415462 | 49415468 | 7mer-m8 | 49415448 | 49415469 | 150 | -19.33 |
| ADediting_1075717 | chr3_49415486_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4743-5p | chr3 | 49415482 | 49415488 | 7mer-m8 | 49415467 | 49415489 | 148 | -24.79 |
| ADediting_1574962 | chr3_49415329_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6131 | chr3 | 49415323 | 49415330 | 8mer-1a | 49415312 | 49415330 | 155 | -22.81 |
| ADediting_1574963 | chr3_49415437_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-3155a | chr3 | 49415434 | 49415440 | 7mer-m8 | 49415420 | 49415441 | 144 | -22.15 |
| ADediting_1574963 | chr3_49415437_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-3155b | chr3 | 49415434 | 49415440 | 7mer-m8 | 49415423 | 49415441 | 144 | -20.99 |
| ADediting_1574963 | chr3_49415437_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-484 | chr3 | 49415434 | 49415440 | 7mer-m8 | 49415420 | 49415441 | 151 | -23.14 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1075680 | chr3_49415239_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-3190-5p | chr3 | 49415233 | 49415239 | 7mer-m8 | 49415221 | 49415240 | 151 | -20.82 |
| ADediting_1075680 | chr3_49415239_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-548s | chr3 | 49415232 | 49415238 | 7mer-m8 | 49415217 | 49415239 | 153 | -14.58 |
| ADediting_1075681 | chr3_49415253_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6807-5p | chr3 | 49415246 | 49415252 | 7mer-m8 | 49415231 | 49415253 | 144 | -20.6 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-10399-5p | chr3 | 49415256 | 49415262 | 7mer-m8 | 49415242 | 49415263 | 144 | -10.39 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6504-3p | chr3 | 49415256 | 49415262 | 7mer-m8 | 49415242 | 49415263 | 148 | -14.48 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-7151-3p | chr3 | 49415254 | 49415261 | 8mer-1a | 49415241 | 49415261 | 144 | -16.51 |
| ADediting_1075683 | chr3_49415262_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-10399-5p | chr3 | 49415256 | 49415262 | 7mer-m8 | 49415242 | 49415263 | 144 | -10.39 |
| ADediting_1075683 | chr3_49415262_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-5089-5p | chr3 | 49415260 | 49415267 | 8mer-1a | 49415245 | 49415267 | 148 | -14.7 |
| ADediting_1075683 | chr3_49415262_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6504-3p | chr3 | 49415256 | 49415262 | 7mer-m8 | 49415242 | 49415263 | 148 | -14.48 |
| ADediting_1075684 | chr3_49415267_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-5089-5p | chr3 | 49415260 | 49415267 | 8mer-1a | 49415245 | 49415267 | 148 | -14.7 |
| ADediting_1075684 | chr3_49415267_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6513-5p | chr3 | 49415261 | 49415267 | 7mer-m8 | 49415245 | 49415268 | 149 | -17.38 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6513-5p | chr3 | 49415261 | 49415267 | 7mer-m8 | 49415245 | 49415268 | 149 | -17.38 |
| ADediting_1075686 | chr3_49415288_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6747-3p | chr3 | 49415283 | 49415289 | 7mer-m8 | 49415269 | 49415290 | 150 | -22.22 |
| ADediting_1075687 | chr3_49415292_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-5001-3p | chr3 | 49415287 | 49415293 | 7mer-m8 | 49415273 | 49415294 | 149 | -21.23 |
| ADediting_1075688 | chr3_49415305_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-378a-5p | chr3 | 49415301 | 49415307 | 7mer-m8 | 49415287 | 49415308 | 153 | -23.97 |
| ADediting_1075689 | chr3_49415340_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-193b-5p | chr3 | 49415337 | 49415344 | 8mer-1a | 49415323 | 49415344 | 147 | -14.49 |
| ADediting_1075689 | chr3_49415340_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-3170 | chr3 | 49415338 | 49415344 | 7mer-m8 | 49415324 | 49415345 | 144 | -13.7 |
| ADediting_1075689 | chr3_49415340_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6855-5p | chr3 | 49415338 | 49415344 | 7mer-m8 | 49415321 | 49415345 | 145 | -17.88 |
| ADediting_1075690 | chr3_49415345_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-3170 | chr3 | 49415338 | 49415344 | 7mer-m8 | 49415324 | 49415345 | 144 | -13.7 |
| ADediting_1075690 | chr3_49415345_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6855-5p | chr3 | 49415338 | 49415344 | 7mer-m8 | 49415321 | 49415345 | 145 | -17.88 |
| ADediting_1075690 | chr3_49415345_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6890-5p | chr3 | 49415339 | 49415345 | 7mer-m8 | 49415326 | 49415346 | 140 | -12.38 |
| ADediting_1075691 | chr3_49415351_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6832-5p | chr3 | 49415345 | 49415351 | 7mer-m8 | 49415330 | 49415352 | 142 | -15.43 |
| ADediting_1075699 | chr3_49415365_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4735-5p | chr3 | 49415363 | 49415369 | 7mer-m8 | 49415349 | 49415370 | 140 | -5.48 |
| ADediting_1075700 | chr3_49415366_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4735-5p | chr3 | 49415363 | 49415369 | 7mer-m8 | 49415349 | 49415370 | 140 | -5.48 |
| ADediting_1075701 | chr3_49415369_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4735-5p | chr3 | 49415363 | 49415369 | 7mer-m8 | 49415349 | 49415370 | 140 | -5.48 |
| ADediting_1075702 | chr3_49415385_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-1227-3p | chr3 | 49415379 | 49415386 | 8mer-1a | 49415367 | 49415386 | 147 | -19.96 |
| ADediting_1075702 | chr3_49415385_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4715-3p | chr3 | 49415378 | 49415384 | 7mer-m8 | 49415363 | 49415385 | 151 | -20.6 |
| ADediting_1075702 | chr3_49415385_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6867-5p | chr3 | 49415383 | 49415389 | 7mer-m8 | 49415368 | 49415390 | 141 | -14.33 |
| ADediting_1075703 | chr3_49415387_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-3650 | chr3 | 49415384 | 49415391 | 8mer-1a | 49415373 | 49415391 | 140 | -13.19 |
| ADediting_1075703 | chr3_49415387_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6867-5p | chr3 | 49415383 | 49415389 | 7mer-m8 | 49415368 | 49415390 | 141 | -14.33 |
| ADediting_1075704 | chr3_49415389_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-3650 | chr3 | 49415384 | 49415391 | 8mer-1a | 49415373 | 49415391 | 140 | -13.19 |
| ADediting_1075704 | chr3_49415389_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6867-5p | chr3 | 49415383 | 49415389 | 7mer-m8 | 49415368 | 49415390 | 141 | -14.33 |
| ADediting_1075704 | chr3_49415389_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-7978 | chr3 | 49415386 | 49415392 | 7mer-m8 | 49415373 | 49415393 | 150 | -16.61 |
| ADediting_1075705 | chr3_49415392_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-12132 | chr3 | 49415390 | 49415396 | 7mer-m8 | 49415375 | 49415397 | 147 | -10.18 |
| ADediting_1075705 | chr3_49415392_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-7978 | chr3 | 49415386 | 49415392 | 7mer-m8 | 49415373 | 49415393 | 150 | -16.61 |
| ADediting_1075706 | chr3_49415395_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-12132 | chr3 | 49415390 | 49415396 | 7mer-m8 | 49415375 | 49415397 | 147 | -10.18 |
| ADediting_1075707 | chr3_49415396_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-12132 | chr3 | 49415390 | 49415396 | 7mer-m8 | 49415375 | 49415397 | 147 | -10.18 |
| ADediting_1075707 | chr3_49415396_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-5089-5p | chr3 | 49415394 | 49415400 | 7mer-m8 | 49415382 | 49415401 | 153 | -15.68 |
| ADediting_1075708 | chr3_49415409_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-1200 | chr3 | 49415405 | 49415411 | 7mer-m8 | 49415391 | 49415412 | 141 | -17.86 |
| ADediting_1075708 | chr3_49415409_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6869-5p | chr3 | 49415402 | 49415408 | 7mer-m8 | 49415387 | 49415409 | 146 | -17.48 |
| ADediting_1075709 | chr3_49415419_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-3977 | chr3 | 49415415 | 49415421 | 7mer-m8 | 49415397 | 49415422 | 146 | -10.11 |
| ADediting_1075710 | chr3_49415422_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-1976 | chr3 | 49415419 | 49415426 | 8mer-1a | 49415406 | 49415426 | 145 | -21.82 |
| ADediting_1075710 | chr3_49415422_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-3977 | chr3 | 49415415 | 49415421 | 7mer-m8 | 49415397 | 49415422 | 146 | -10.11 |
| ADediting_1075711 | chr3_49415444_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6778-3p | chr3 | 49415440 | 49415447 | 8mer-1a | 49415429 | 49415447 | 143 | -17.83 |
| ADediting_1075711 | chr3_49415444_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6791-3p | chr3 | 49415441 | 49415447 | 7mer-1a | 49415428 | 49415447 | 145 | -25.99 |
| ADediting_1075711 | chr3_49415444_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6836-3p | chr3 | 49415441 | 49415447 | 7mer-m8 | 49415428 | 49415448 | 147 | -21.53 |
| ADediting_1075712 | chr3_49415448_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6836-3p | chr3 | 49415441 | 49415447 | 7mer-m8 | 49415428 | 49415448 | 147 | -21.53 |
| ADediting_1075717 | chr3_49415486_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-3135b | chr3 | 49415481 | 49415487 | 7mer-m8 | 49415463 | 49415488 | 152 | -30.49 |
| ADediting_1075717 | chr3_49415486_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-3652 | chr3 | 49415482 | 49415488 | 7mer-m8 | 49415473 | 49415489 | 149 | -17.94 |
| ADediting_1574961 | chr3_49415300_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-6790-3p | chr3 | 49415297 | 49415304 | 8mer-1a | 49415279 | 49415304 | 144 | -22.32 |
| ADediting_1574962 | chr3_49415329_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4716-5p | chr3 | 49415327 | 49415333 | 7mer-m8 | 49415313 | 49415334 | 140 | -9.16 |
| ADediting_1574962 | chr3_49415329_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4781-3p | chr3 | 49415325 | 49415331 | 7mer-m8 | 49415309 | 49415332 | 142 | -13.55 |
| ADediting_1574963 | chr3_49415437_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-498-5p | chr3 | 49415430 | 49415436 | 7mer-m8 | 49415414 | 49415437 | 144 | -13.58 |
| ADediting_1647869 | chr3_49415503_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-431-5p | chr3 | 49415500 | 49415506 | 7mer-m8 | 49415487 | 49415507 | 140 | -12.89 |
| ADediting_1647869 | chr3_49415503_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-5691 | chr3 | 49415496 | 49415503 | 8mer-1a | 49415481 | 49415503 | 146 | -19.21 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1075681 | chr3_49415253_+ | ENSG00000145022.4 | ENST00000487432.1 | TCTA-203 | hsa-miR-4634 | chr3 | 49415251 | 49415257 | 7mer-m8 | 49415240 | 49415258 | 150 | -21.75 |
| ADediting_1075681 | chr3_49415253_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-4634 | chr3 | 49415251 | 49415257 | 7mer-m8 | 49415240 | 49415258 | 150 | -21.75 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000487432.1 | TCTA-203 | hsa-miR-513a-5p | chr3 | 49415256 | 49415262 | 7mer-m8 | 49415246 | 49415263 | 144 | -16.68 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-513a-5p | chr3 | 49415256 | 49415262 | 7mer-m8 | 49415246 | 49415263 | 144 | -16.68 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-638 | chr3 | 49415261 | 49415267 | 7mer-1a | 49415243 | 49415267 | 159 | -35.77 |
| ADediting_1075683 | chr3_49415262_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-8052 | chr3 | 49415261 | 49415267 | 7mer-1a | 49415249 | 49415267 | 140 | -24.15 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-302a-3p | chr3 | 49415267 | 49415273 | 7mer-m8 | 49415253 | 49415274 | 143 | -14.98 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-302b-3p | chr3 | 49415267 | 49415273 | 7mer-m8 | 49415252 | 49415274 | 141 | -9.83 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-302c-3p | chr3 | 49415267 | 49415273 | 7mer-m8 | 49415254 | 49415274 | 145 | -11.96 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-302d-3p | chr3 | 49415267 | 49415273 | 7mer-m8 | 49415247 | 49415274 | 148 | -13.74 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-302e | chr3 | 49415267 | 49415273 | 7mer-m8 | 49415258 | 49415274 | 141 | -8.62 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-372-3p | chr3 | 49415267 | 49415273 | 7mer-m8 | 49415247 | 49415274 | 155 | -20.46 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-373-3p | chr3 | 49415267 | 49415273 | 7mer-m8 | 49415251 | 49415274 | 164 | -22.25 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-512-3p | chr3 | 49415266 | 49415272 | 7mer-m8 | 49415252 | 49415273 | 149 | -15.51 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-520a-3p | chr3 | 49415267 | 49415273 | 7mer-m8 | 49415253 | 49415274 | 140 | -11.03 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-520b-3p | chr3 | 49415267 | 49415273 | 7mer-m8 | 49415255 | 49415274 | 141 | -16.52 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-520c-3p | chr3 | 49415267 | 49415273 | 7mer-m8 | 49415254 | 49415274 | 146 | -16.52 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-520d-3p | chr3 | 49415267 | 49415273 | 7mer-m8 | 49415253 | 49415274 | 140 | -15.12 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-520e-3p | chr3 | 49415267 | 49415273 | 7mer-m8 | 49415254 | 49415274 | 140 | -13.32 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6506-5p | chr3 | 49415262 | 49415268 | 7mer-m8 | 49415247 | 49415269 | 144 | -13.78 |
| ADediting_1075686 | chr3_49415288_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-4707-3p | chr3 | 49415285 | 49415292 | 8mer-1a | 49415271 | 49415292 | 162 | -27.57 |
| ADediting_1075687 | chr3_49415292_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-4485-5p | chr3 | 49415287 | 49415294 | 8mer-1a | 49415278 | 49415294 | 157 | -26.74 |
| ADediting_1075690 | chr3_49415345_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-483-5p | chr3 | 49415342 | 49415348 | 7mer-m8 | 49415328 | 49415349 | 140 | -14.01 |
| ADediting_1075691 | chr3_49415351_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-374b-3p | chr3 | 49415349 | 49415356 | 8mer-1a | 49415333 | 49415356 | 151 | -11.83 |
| ADediting_1075691 | chr3_49415351_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-4756-3p | chr3 | 49415345 | 49415351 | 7mer-m8 | 49415332 | 49415352 | 152 | -16.99 |
| ADediting_1075692 | chr3_49415354_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-222-5p | chr3 | 49415349 | 49415356 | 8mer-1a | 49415336 | 49415356 | 141 | -9.81 |
| ADediting_1075692 | chr3_49415354_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-30a-3p | chr3 | 49415351 | 49415358 | 8mer-1a | 49415333 | 49415358 | 158 | -12.16 |
| ADediting_1075692 | chr3_49415354_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-30d-3p | chr3 | 49415351 | 49415358 | 8mer-1a | 49415336 | 49415358 | 153 | -12.1 |
| ADediting_1075692 | chr3_49415354_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-30e-3p | chr3 | 49415351 | 49415358 | 8mer-1a | 49415333 | 49415358 | 158 | -13.61 |
| ADediting_1075692 | chr3_49415354_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-936 | chr3 | 49415348 | 49415355 | 8mer-1a | 49415332 | 49415355 | 151 | -22.07 |
| ADediting_1075693 | chr3_49415355_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-325 | chr3 | 49415349 | 49415356 | 8mer-1a | 49415334 | 49415356 | 145 | -9.91 |
| ADediting_1075694 | chr3_49415356_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-630 | chr3 | 49415355 | 49415362 | 8mer-1a | 49415342 | 49415362 | 158 | -15.14 |
| ADediting_1075697 | chr3_49415363_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-4742-3p | chr3 | 49415357 | 49415364 | 8mer-1a | 49415342 | 49415364 | 142 | -9.18 |
| ADediting_1075698 | chr3_49415364_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-578 | chr3 | 49415360 | 49415366 | 7mer-m8 | 49415347 | 49415367 | 148 | -9.14 |
| ADediting_1075698 | chr3_49415364_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-643 | chr3 | 49415358 | 49415365 | 8mer-1a | 49415343 | 49415365 | 147 | -12.1 |
| ADediting_1075699 | chr3_49415365_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6844 | chr3 | 49415360 | 49415366 | 7mer-m8 | 49415346 | 49415367 | 155 | -7.49 |
| ADediting_1075706 | chr3_49415395_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-638 | chr3 | 49415395 | 49415401 | 7mer-1a | 49415377 | 49415401 | 155 | -28.82 |
| ADediting_1075706 | chr3_49415395_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-653-3p | chr3 | 49415390 | 49415396 | 7mer-m8 | 49415376 | 49415397 | 160 | -17.33 |
| ADediting_1075709 | chr3_49415419_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6747-3p | chr3 | 49415418 | 49415425 | 8mer-1a | 49415403 | 49415425 | 149 | -23.42 |
| ADediting_1574962 | chr3_49415329_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6131 | chr3 | 49415324 | 49415331 | 8mer-1a | 49415313 | 49415331 | 155 | -22.81 |
| ADediting_1574963 | chr3_49415437_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-3155a | chr3 | 49415435 | 49415441 | 7mer-m8 | 49415421 | 49415442 | 144 | -22.15 |
| ADediting_1574963 | chr3_49415437_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-3155b | chr3 | 49415435 | 49415441 | 7mer-m8 | 49415424 | 49415442 | 144 | -20.99 |
| ADediting_1574963 | chr3_49415437_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-484 | chr3 | 49415435 | 49415441 | 7mer-m8 | 49415421 | 49415442 | 151 | -23.14 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1075680 | chr3_49415239_+ | ENSG00000145022.4 | ENST00000487432.1 | TCTA-203 | hsa-miR-3190-5p | chr3 | 49415234 | 49415240 | 7mer-m8 | 49415222 | 49415241 | 151 | -20.82 |
| ADediting_1075680 | chr3_49415239_+ | ENSG00000145022.4 | ENST00000487432.1 | TCTA-203 | hsa-miR-548s | chr3 | 49415233 | 49415239 | 7mer-m8 | 49415218 | 49415240 | 153 | -14.58 |
| ADediting_1075680 | chr3_49415239_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-3190-5p | chr3 | 49415234 | 49415240 | 7mer-m8 | 49415222 | 49415241 | 151 | -20.82 |
| ADediting_1075680 | chr3_49415239_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-548s | chr3 | 49415233 | 49415239 | 7mer-m8 | 49415218 | 49415240 | 153 | -14.58 |
| ADediting_1075681 | chr3_49415253_+ | ENSG00000145022.4 | ENST00000487432.1 | TCTA-203 | hsa-miR-6807-5p | chr3 | 49415247 | 49415253 | 7mer-m8 | 49415232 | 49415254 | 144 | -20.6 |
| ADediting_1075681 | chr3_49415253_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6807-5p | chr3 | 49415247 | 49415253 | 7mer-m8 | 49415232 | 49415254 | 144 | -20.6 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000487432.1 | TCTA-203 | hsa-miR-10399-5p | chr3 | 49415257 | 49415263 | 7mer-m8 | 49415243 | 49415264 | 144 | -10.39 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000487432.1 | TCTA-203 | hsa-miR-6504-3p | chr3 | 49415257 | 49415263 | 7mer-m8 | 49415243 | 49415264 | 148 | -14.48 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000487432.1 | TCTA-203 | hsa-miR-7151-3p | chr3 | 49415255 | 49415262 | 8mer-1a | 49415242 | 49415262 | 144 | -16.51 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-10399-5p | chr3 | 49415257 | 49415263 | 7mer-m8 | 49415243 | 49415264 | 144 | -10.39 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6504-3p | chr3 | 49415257 | 49415263 | 7mer-m8 | 49415243 | 49415264 | 148 | -14.48 |
| ADediting_1075682 | chr3_49415261_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-7151-3p | chr3 | 49415255 | 49415262 | 8mer-1a | 49415242 | 49415262 | 144 | -16.51 |
| ADediting_1075683 | chr3_49415262_+ | ENSG00000145022.4 | ENST00000487432.1 | TCTA-203 | hsa-miR-10399-5p | chr3 | 49415257 | 49415263 | 7mer-m8 | 49415243 | 49415264 | 144 | -10.39 |
| ADediting_1075683 | chr3_49415262_+ | ENSG00000145022.4 | ENST00000487432.1 | TCTA-203 | hsa-miR-6504-3p | chr3 | 49415257 | 49415263 | 7mer-m8 | 49415243 | 49415264 | 148 | -14.48 |
| ADediting_1075683 | chr3_49415262_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-10399-5p | chr3 | 49415257 | 49415263 | 7mer-m8 | 49415243 | 49415264 | 144 | -10.39 |
| ADediting_1075683 | chr3_49415262_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-5089-5p | chr3 | 49415261 | 49415268 | 8mer-1a | 49415246 | 49415268 | 148 | -14.7 |
| ADediting_1075683 | chr3_49415262_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6504-3p | chr3 | 49415257 | 49415263 | 7mer-m8 | 49415243 | 49415264 | 148 | -14.48 |
| ADediting_1075684 | chr3_49415267_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-5089-5p | chr3 | 49415261 | 49415268 | 8mer-1a | 49415246 | 49415268 | 148 | -14.7 |
| ADediting_1075684 | chr3_49415267_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6513-5p | chr3 | 49415262 | 49415268 | 7mer-m8 | 49415246 | 49415269 | 149 | -17.38 |
| ADediting_1075685 | chr3_49415268_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6513-5p | chr3 | 49415262 | 49415268 | 7mer-m8 | 49415246 | 49415269 | 149 | -17.38 |
| ADediting_1075686 | chr3_49415288_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6747-3p | chr3 | 49415284 | 49415290 | 7mer-m8 | 49415270 | 49415291 | 150 | -22.22 |
| ADediting_1075687 | chr3_49415292_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-5001-3p | chr3 | 49415288 | 49415294 | 7mer-m8 | 49415274 | 49415295 | 149 | -21.23 |
| ADediting_1075688 | chr3_49415305_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-378a-5p | chr3 | 49415302 | 49415308 | 7mer-m8 | 49415288 | 49415309 | 153 | -23.97 |
| ADediting_1075689 | chr3_49415340_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-193b-5p | chr3 | 49415338 | 49415345 | 8mer-1a | 49415324 | 49415345 | 147 | -14.49 |
| ADediting_1075689 | chr3_49415340_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-3170 | chr3 | 49415339 | 49415345 | 7mer-m8 | 49415325 | 49415346 | 144 | -13.7 |
| ADediting_1075689 | chr3_49415340_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6855-5p | chr3 | 49415339 | 49415345 | 7mer-m8 | 49415322 | 49415346 | 145 | -17.88 |
| ADediting_1075690 | chr3_49415345_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-3170 | chr3 | 49415339 | 49415345 | 7mer-m8 | 49415325 | 49415346 | 144 | -13.7 |
| ADediting_1075690 | chr3_49415345_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6855-5p | chr3 | 49415339 | 49415345 | 7mer-m8 | 49415322 | 49415346 | 145 | -17.88 |
| ADediting_1075690 | chr3_49415345_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6890-5p | chr3 | 49415340 | 49415346 | 7mer-m8 | 49415327 | 49415347 | 140 | -12.38 |
| ADediting_1075691 | chr3_49415351_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6832-5p | chr3 | 49415346 | 49415352 | 7mer-m8 | 49415331 | 49415353 | 142 | -15.43 |
| ADediting_1075699 | chr3_49415365_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-4735-5p | chr3 | 49415364 | 49415370 | 7mer-m8 | 49415350 | 49415371 | 140 | -5.48 |
| ADediting_1075700 | chr3_49415366_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-4735-5p | chr3 | 49415364 | 49415370 | 7mer-m8 | 49415350 | 49415371 | 140 | -5.48 |
| ADediting_1075701 | chr3_49415369_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-4735-5p | chr3 | 49415364 | 49415370 | 7mer-m8 | 49415350 | 49415371 | 140 | -5.48 |
| ADediting_1075702 | chr3_49415385_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-1227-3p | chr3 | 49415380 | 49415387 | 8mer-1a | 49415368 | 49415387 | 147 | -19.96 |
| ADediting_1075702 | chr3_49415385_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-4715-3p | chr3 | 49415379 | 49415385 | 7mer-m8 | 49415364 | 49415386 | 151 | -20.6 |
| ADediting_1075702 | chr3_49415385_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6867-5p | chr3 | 49415384 | 49415390 | 7mer-m8 | 49415369 | 49415391 | 141 | -14.33 |
| ADediting_1075703 | chr3_49415387_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-3650 | chr3 | 49415385 | 49415392 | 8mer-1a | 49415374 | 49415392 | 140 | -13.19 |
| ADediting_1075703 | chr3_49415387_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6867-5p | chr3 | 49415384 | 49415390 | 7mer-m8 | 49415369 | 49415391 | 141 | -14.33 |
| ADediting_1075704 | chr3_49415389_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-3650 | chr3 | 49415385 | 49415392 | 8mer-1a | 49415374 | 49415392 | 140 | -13.19 |
| ADediting_1075704 | chr3_49415389_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6867-5p | chr3 | 49415384 | 49415390 | 7mer-m8 | 49415369 | 49415391 | 141 | -14.33 |
| ADediting_1075704 | chr3_49415389_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-7978 | chr3 | 49415387 | 49415393 | 7mer-m8 | 49415374 | 49415394 | 150 | -16.61 |
| ADediting_1075705 | chr3_49415392_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-12132 | chr3 | 49415391 | 49415397 | 7mer-m8 | 49415376 | 49415398 | 147 | -10.18 |
| ADediting_1075705 | chr3_49415392_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-7978 | chr3 | 49415387 | 49415393 | 7mer-m8 | 49415374 | 49415394 | 150 | -16.61 |
| ADediting_1075706 | chr3_49415395_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-12132 | chr3 | 49415391 | 49415397 | 7mer-m8 | 49415376 | 49415398 | 147 | -10.18 |
| ADediting_1075707 | chr3_49415396_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-12132 | chr3 | 49415391 | 49415397 | 7mer-m8 | 49415376 | 49415398 | 147 | -10.18 |
| ADediting_1075707 | chr3_49415396_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-5089-5p | chr3 | 49415395 | 49415401 | 7mer-m8 | 49415383 | 49415402 | 153 | -15.68 |
| ADediting_1075708 | chr3_49415409_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-1200 | chr3 | 49415406 | 49415412 | 7mer-m8 | 49415392 | 49415413 | 141 | -17.86 |
| ADediting_1075708 | chr3_49415409_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6869-5p | chr3 | 49415403 | 49415409 | 7mer-m8 | 49415388 | 49415410 | 146 | -17.48 |
| ADediting_1075709 | chr3_49415419_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-3977 | chr3 | 49415416 | 49415422 | 7mer-m8 | 49415398 | 49415423 | 146 | -10.11 |
| ADediting_1075710 | chr3_49415422_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-1976 | chr3 | 49415420 | 49415427 | 8mer-1a | 49415407 | 49415427 | 145 | -21.82 |
| ADediting_1075710 | chr3_49415422_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-3977 | chr3 | 49415416 | 49415422 | 7mer-m8 | 49415398 | 49415423 | 146 | -10.11 |
| ADediting_1574961 | chr3_49415300_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-6790-3p | chr3 | 49415298 | 49415305 | 8mer-1a | 49415280 | 49415305 | 144 | -22.32 |
| ADediting_1574962 | chr3_49415329_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-4716-5p | chr3 | 49415328 | 49415334 | 7mer-m8 | 49415314 | 49415335 | 140 | -9.16 |
| ADediting_1574962 | chr3_49415329_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-4781-3p | chr3 | 49415326 | 49415332 | 7mer-m8 | 49415310 | 49415333 | 142 | -13.55 |
| ADediting_1574963 | chr3_49415437_+ | ENSG00000145022.4 | ENST00000493381.1 | TCTA-205 | hsa-miR-498-5p | chr3 | 49415431 | 49415437 | 7mer-m8 | 49415415 | 49415438 | 144 | -13.58 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_286380 | chr11_79422188_- | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-5579-3p | chr3 | 49416314 | 49416320 | 7mer-m8 | 49416296 | 49416321 | 162 | -22.87 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-5585-3p | chr3 | 49415822 | 49415828 | 7mer-m8 | 49415808 | 49415829 | 140 | -13.55 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-5585-3p | chr3 | 49415691 | 49415697 | 7mer-m8 | 49415679 | 49415698 | 156 | -20.93 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_496066 | chr15_66496985_- | ENSG00000145022.4 | ENST00000273590.3 | TCTA-201 | hsa-miR-4512 | chr3 | 49415592 | 49415598 | 7mer-m8 | 49415578 | 49415599 | 140 | -16.92 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for TCTA |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000273590.3 | protein_coding |  |  |
| ENST00000487432.1 | lncRNA |  |  |
| ENST00000493381.1 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1075680 | ENST00000273590.3 | chr3_49415239_+ | 910 | -827.20 | -825.20 | -864.10 |
| ADediting_1075681 | ENST00000273590.3 | chr3_49415253_+ | 924 | -827.30 | -825.20 | -864.10 |
| ADediting_1075682 | ENST00000273590.3 | chr3_49415261_+ | 932 | -824.90 | -825.20 | -864.10 |
| ADediting_1075683 | ENST00000273590.3 | chr3_49415262_+ | 933 | -825.20 | -825.20 | -864.10 |
| ADediting_1075684 | ENST00000273590.3 | chr3_49415267_+ | 938 | -824.90 | -825.20 | -864.10 |
| ADediting_1075685 | ENST00000273590.3 | chr3_49415268_+ | 939 | -824.90 | -825.20 | -864.10 |
| ADediting_1075686 | ENST00000273590.3 | chr3_49415288_+ | 959 | -824.50 | -825.20 | -864.10 |
| ADediting_1075687 | ENST00000273590.3 | chr3_49415292_+ | 963 | -825.50 | -825.20 | -864.10 |
| ADediting_1574961 | ENST00000273590.3 | chr3_49415300_+ | 971 | -830.10 | -825.20 | -864.10 |
| ADediting_1075688 | ENST00000273590.3 | chr3_49415305_+ | 976 | -824.50 | -825.20 | -864.10 |
| ADediting_1574962 | ENST00000273590.3 | chr3_49415329_+ | 1000 | -825.20 | -825.20 | -864.10 |
| ADediting_1075689 | ENST00000273590.3 | chr3_49415340_+ | 1011 | -825.20 | -825.20 | -864.10 |
| ADediting_1075690 | ENST00000273590.3 | chr3_49415345_+ | 1016 | -824.50 | -825.20 | -864.10 |
| ADediting_1075691 | ENST00000273590.3 | chr3_49415351_+ | 1022 | -827.10 | -825.20 | -864.10 |
| ADediting_1075692 | ENST00000273590.3 | chr3_49415354_+ | 1025 | -825.70 | -825.20 | -864.10 |
| ADediting_1075693 | ENST00000273590.3 | chr3_49415355_+ | 1026 | -825.20 | -825.20 | -864.10 |
| ADediting_1075694 | ENST00000273590.3 | chr3_49415356_+ | 1027 | -826.00 | -825.20 | -864.10 |
| ADediting_1075695 | ENST00000273590.3 | chr3_49415357_+ | 1028 | -825.70 | -825.20 | -864.10 |
| ADediting_1075696 | ENST00000273590.3 | chr3_49415358_+ | 1029 | -826.00 | -825.20 | -864.10 |
| ADediting_1647868 | ENST00000273590.3 | chr3_49415362_+ | 1033 | -825.20 | -825.20 | -864.10 |
| ADediting_1075697 | ENST00000273590.3 | chr3_49415363_+ | 1034 | -825.20 | -825.20 | -864.10 |
| ADediting_1075698 | ENST00000273590.3 | chr3_49415364_+ | 1035 | -825.20 | -825.20 | -864.10 |
| ADediting_1075699 | ENST00000273590.3 | chr3_49415365_+ | 1036 | -825.20 | -825.20 | -864.10 |
| ADediting_1075700 | ENST00000273590.3 | chr3_49415366_+ | 1037 | -825.20 | -825.20 | -864.10 |
| ADediting_1075701 | ENST00000273590.3 | chr3_49415369_+ | 1040 | -824.90 | -825.20 | -864.10 |
| ADediting_1075702 | ENST00000273590.3 | chr3_49415385_+ | 1056 | -825.20 | -825.20 | -864.10 |
| ADediting_1075703 | ENST00000273590.3 | chr3_49415387_+ | 1058 | -824.90 | -825.20 | -864.10 |
| ADediting_1075704 | ENST00000273590.3 | chr3_49415389_+ | 1060 | -827.50 | -825.20 | -864.10 |
| ADediting_1075705 | ENST00000273590.3 | chr3_49415392_+ | 1063 | -827.60 | -825.20 | -864.10 |
| ADediting_1075706 | ENST00000273590.3 | chr3_49415395_+ | 1066 | -825.20 | -825.20 | -864.10 |
| ADediting_1075707 | ENST00000273590.3 | chr3_49415396_+ | 1067 | -825.20 | -825.20 | -864.10 |
| ADediting_1075708 | ENST00000273590.3 | chr3_49415409_+ | 1080 | -824.50 | -825.20 | -864.10 |
| ADediting_1075709 | ENST00000273590.3 | chr3_49415419_+ | 1090 | -824.90 | -825.20 | -864.10 |
| ADediting_1075710 | ENST00000273590.3 | chr3_49415422_+ | 1093 | -824.40 | -825.20 | -864.10 |
| ADediting_1574963 | ENST00000273590.3 | chr3_49415437_+ | 1108 | -831.90 | -825.20 | -864.10 |
| ADediting_1075711 | ENST00000273590.3 | chr3_49415444_+ | 1115 | -825.50 | -825.20 | -864.10 |
| ADediting_1075712 | ENST00000273590.3 | chr3_49415448_+ | 1119 | -824.40 | -825.20 | -864.10 |
| ADediting_1075713 | ENST00000273590.3 | chr3_49415457_+ | 1128 | -824.40 | -825.20 | -864.10 |
| ADediting_1075714 | ENST00000273590.3 | chr3_49415465_+ | 1136 | -825.20 | -825.20 | -864.10 |
| ADediting_1075715 | ENST00000273590.3 | chr3_49415466_+ | 1137 | -825.20 | -825.20 | -864.10 |
| ADediting_1075716 | ENST00000273590.3 | chr3_49415468_+ | 1139 | -822.50 | -825.20 | -864.10 |
| ADediting_1075717 | ENST00000273590.3 | chr3_49415486_+ | 1157 | -825.30 | -825.20 | -864.10 |
| ADediting_1647869 | ENST00000273590.3 | chr3_49415503_+ | 1174 | -825.10 | -825.20 | -864.10 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1075680 | ENST00000487432.1 | chr3_49415239_+ | 866 | -376.10 | -374.90 | -385.60 |
| ADediting_1075681 | ENST00000487432.1 | chr3_49415253_+ | 880 | -374.80 | -374.90 | -385.60 |
| ADediting_1075682 | ENST00000487432.1 | chr3_49415261_+ | 888 | -376.70 | -374.90 | -385.60 |
| ADediting_1075683 | ENST00000487432.1 | chr3_49415262_+ | 889 | -379.50 | -374.90 | -385.60 |
| ADediting_1075680 | ENST00000493381.1 | chr3_49415239_+ | 878 | -441.80 | -441.60 | -477.30 |
| ADediting_1075681 | ENST00000493381.1 | chr3_49415253_+ | 892 | -441.80 | -441.60 | -477.30 |
| ADediting_1075682 | ENST00000493381.1 | chr3_49415261_+ | 900 | -441.80 | -441.60 | -477.30 |
| ADediting_1075683 | ENST00000493381.1 | chr3_49415262_+ | 901 | -441.60 | -441.60 | -477.30 |
| ADediting_1075684 | ENST00000493381.1 | chr3_49415267_+ | 906 | -441.30 | -441.60 | -477.30 |
| ADediting_1075685 | ENST00000493381.1 | chr3_49415268_+ | 907 | -441.30 | -441.60 | -477.30 |
| ADediting_1075686 | ENST00000493381.1 | chr3_49415288_+ | 927 | -443.40 | -441.60 | -477.30 |
| ADediting_1075687 | ENST00000493381.1 | chr3_49415292_+ | 931 | -444.00 | -441.60 | -477.30 |
| ADediting_1574961 | ENST00000493381.1 | chr3_49415300_+ | 939 | -441.50 | -441.60 | -477.30 |
| ADediting_1075688 | ENST00000493381.1 | chr3_49415305_+ | 944 | -441.50 | -441.60 | -477.30 |
| ADediting_1574962 | ENST00000493381.1 | chr3_49415329_+ | 968 | -441.60 | -441.60 | -477.30 |
| ADediting_1075689 | ENST00000493381.1 | chr3_49415340_+ | 979 | -442.90 | -441.60 | -477.30 |
| ADediting_1075690 | ENST00000493381.1 | chr3_49415345_+ | 984 | -442.60 | -441.60 | -477.30 |
| ADediting_1075691 | ENST00000493381.1 | chr3_49415351_+ | 990 | -443.30 | -441.60 | -477.30 |
| ADediting_1075692 | ENST00000493381.1 | chr3_49415354_+ | 993 | -441.90 | -441.60 | -477.30 |
| ADediting_1075693 | ENST00000493381.1 | chr3_49415355_+ | 994 | -441.60 | -441.60 | -477.30 |
| ADediting_1075694 | ENST00000493381.1 | chr3_49415356_+ | 995 | -442.40 | -441.60 | -477.30 |
| ADediting_1075695 | ENST00000493381.1 | chr3_49415357_+ | 996 | -442.60 | -441.60 | -477.30 |
| ADediting_1075696 | ENST00000493381.1 | chr3_49415358_+ | 997 | -442.40 | -441.60 | -477.30 |
| ADediting_1647868 | ENST00000493381.1 | chr3_49415362_+ | 1001 | -441.60 | -441.60 | -477.30 |
| ADediting_1075697 | ENST00000493381.1 | chr3_49415363_+ | 1002 | -441.60 | -441.60 | -477.30 |
| ADediting_1075698 | ENST00000493381.1 | chr3_49415364_+ | 1003 | -441.60 | -441.60 | -477.30 |
| ADediting_1075699 | ENST00000493381.1 | chr3_49415365_+ | 1004 | -441.60 | -441.60 | -477.30 |
| ADediting_1075700 | ENST00000493381.1 | chr3_49415366_+ | 1005 | -441.60 | -441.60 | -477.30 |
| ADediting_1075701 | ENST00000493381.1 | chr3_49415369_+ | 1008 | -441.30 | -441.60 | -477.30 |
| ADediting_1075702 | ENST00000493381.1 | chr3_49415385_+ | 1024 | -441.60 | -441.60 | -477.30 |
| ADediting_1075703 | ENST00000493381.1 | chr3_49415387_+ | 1026 | -441.30 | -441.60 | -477.30 |
| ADediting_1075704 | ENST00000493381.1 | chr3_49415389_+ | 1028 | -443.90 | -441.60 | -477.30 |
| ADediting_1075705 | ENST00000493381.1 | chr3_49415392_+ | 1031 | -443.10 | -441.60 | -477.30 |
| ADediting_1075706 | ENST00000493381.1 | chr3_49415395_+ | 1034 | -441.60 | -441.60 | -477.30 |
| ADediting_1075707 | ENST00000493381.1 | chr3_49415396_+ | 1035 | -441.90 | -441.60 | -477.30 |
| ADediting_1075708 | ENST00000493381.1 | chr3_49415409_+ | 1048 | -443.20 | -441.60 | -477.30 |
| ADediting_1075709 | ENST00000493381.1 | chr3_49415419_+ | 1058 | -443.90 | -441.60 | -477.30 |
| ADediting_1075710 | ENST00000493381.1 | chr3_49415422_+ | 1061 | -443.20 | -441.60 | -477.30 |
| ADediting_1574963 | ENST00000493381.1 | chr3_49415437_+ | 1076 | -446.70 | -441.60 | -477.30 |
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Relation with ADAR for TCTA |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| IFG | ADediting_1075692 | chr3_49415354_+ | 0.416959788084736 | 0.16985254493387 | 0.313522685267466 | 0.210065526332982 | 0.0334834384372526 | 0.426529593133892 |
| PG | ADediting_1075701 | chr3_49415369_+ | 0.136587302278581 | -0.109560689483627 | 0.0316150709533775 | -0.157666074314254 | 1.48801564026482e-05 | 0.311679841341501 |
| TCX | ADediting_1075715 | chr3_49415466_+ | 0.239884548590646 | 0.0965441305773532 | 1.04269827843017e-06 | 0.386365886026998 | 0.401440179465125 | -0.0690038425608922 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.71408216258915e-33 | 0.612371613567744 | 4.75116133337814e-25 | 0.541820952051236 | 1.17948422236287e-31 | 0.599656679833743 |
| AC | 2.0844576208812e-47 | 0.75527918165104 | 1.13432949613294e-25 | 0.598369365696415 | 1.13543722956659e-30 | 0.643911325752312 |
| PCC | 6.74683754756448e-22 | 0.62270775038137 | 1.72694379488448e-19 | 0.592534729195868 | 8.45602941016988e-05 | 0.280551761680751 |
| TCX | 2.50069819079424e-15 | 0.58814787437888 | 0.0039714872252868 | 0.233870957498611 | 2.08194948835651e-08 | 0.437981172993054 |
| FP | 2.19622994857843e-27 | 0.698626322004972 | 4.73442159153379e-11 | 0.467504066657287 | 3.23311220359043e-11 | 0.471037378314667 |
| IFG | 5.83191427137713e-06 | 0.773292527927937 | 7.87250092347171e-05 | 0.706622433788953 | 0.023310515870563 | 0.451987045169525 |
| PG | 1.56045800624563e-11 | 0.468412794824332 | 2.98457403443893e-06 | 0.33487359887989 | 0.00134669508865966 | 0.233382118636772 |
| STG | 1.59421651150682e-15 | 0.735606817361442 | 0.00032622596982179 | 0.382777642655591 | 9.96956900344685e-05 | 0.411752757143686 |
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Relation with AD stages for TCTA |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1075686 | chr3_49415288_+ | 0.00021974775233827 | 0.34841267482466 |
| IFG | ADediting_1075690 | chr3_49415345_+ | 0.0387097312878168 | 0.415805425726064 |
| IFG | ADediting_1075707 | chr3_49415396_+ | 0.0354713369979928 | 0.422303326441651 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| TCX | 0.000289846677817161 | 0.345221042236842 |
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RelatedDrugs for TCTA |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TCTA |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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