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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for UPF3A |
 Gene summary |
| Gene information | Gene symbol | UPF3A | Gene ID | 65110 |
| Gene name | UPF3A regulator of nonsense mediated mRNA decay | |
| Synonyms | HUPF3A|RENT3A|UPF3 | |
| Cytomap | 13q34 | |
| Type of gene | protein-coding | |
| Description | regulator of nonsense transcripts 3AUPF3 regulator of nonsense transcripts homolog AhUpf3nonsense mRNA reducing factor 3Aup-frameshift suppressor 3 homolog A | |
| Modification date | 20200313 | |
| UniProtAcc | Q9H1J1, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| UPF3A | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 16601204 |
| UPF3A | GO:0045727 | positive regulation of translation | 16601204 |
Top |
RNA A-to-I events for UPF3A |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_385341(114283046, +), ADediting_385342(114283078, +), ADediting_385343(114283081, +), ADediting_385344(114283088, +), ADediting_385345(114283103, +), ADediting_385346(114283121, +), ADediting_385347(114283122, +), ADediting_385348(114283141, +), ADediting_385349(114283145, +), ADediting_385350(114283148, +), ADediting_385351(114283155, +), ADediting_385352(114283157, +), ADediting_385353(114283202, +), ADediting_385354(114283217, +), ADediting_385355(114283229, +), ADediting_385356(114283242, +), ADediting_385357(114283255, +), ADediting_385358(114283267, +), ADediting_385359(114283272, +), ADediting_385360(114283280, +), ADediting_385361(114283281, +), ADediting_385362(114283282, +), ADediting_385363(114283294, +), ADediting_385364(114284100, +), ADediting_385365(114284102, +), ADediting_385366(114284108, +), ADediting_385367(114284109, +), ADediting_385368(114284114, +), ADediting_385369(114284122, +), ADediting_385370(114284130, +), ADediting_385371(114284131, +), ADediting_385372(114284144, +), ADediting_385373(114284152, +), ADediting_385374(114284155, +), ADediting_385375(114284172, +), ADediting_385376(114284175, +), ADediting_385377(114284176, +), ADediting_385378(114284204, +), ADediting_385379(114284206, +), ADediting_385380(114284215, +), ADediting_385381(114284219, +), ADediting_385382(114284231, +), ADediting_385383(114284241, +), ADediting_385384(114284247, +), ADediting_385385(114284251, +), ADediting_385386(114284282, +), ADediting_385387(114284283, +), ADediting_385388(114284317, +), ADediting_385389(114284322, +), ADediting_385390(114284419, +), ADediting_385391(114284433, +), ADediting_385392(114284441, +), ADediting_385393(114284477, +), ADediting_385394(114284578, +), ADediting_385395(114284579, +), ADediting_385396(114284620, +), ADediting_385397(114284662, +), ADediting_385398(114284836, +), ADediting_385399(114284850, +), ADediting_385400(114284853, +), ADediting_385401(114284862, +), ADediting_385402(114284873, +), ADediting_385403(114284901, +), ADediting_385404(114284914, +), ADediting_385405(114284915, +), ADediting_385406(114284916, +), ADediting_385407(114285389, +), ADediting_385408(114287372, +), ADediting_385409(114287375, +), ADediting_385410(114287380, +), ADediting_385411(114287391, +), ADediting_385412(114287406, +), ADediting_385413(114287414, +), ADediting_385414(114287429, +), ADediting_385415(114287430, +), ADediting_385416(114287436, +), ADediting_385417(114287437, +), ADediting_385418(114287440, +), ADediting_385419(114287441, +), ADediting_385420(114287444, +), ADediting_385421(114287447, +), ADediting_385422(114287452, +), ADediting_385423(114287468, +), ADediting_385424(114287470, +), ADediting_385425(114287476, +), ADediting_385426(114287480, +), ADediting_385427(114287484, +), ADediting_385428(114287497, +), ADediting_385429(114287512, +), ADediting_385430(114287516, +), ADediting_385431(114287519, +), ADediting_385432(114287532, +), ADediting_385433(114287536, +), ADediting_385434(114287543, +), ADediting_385435(114287548, +), ADediting_385436(114287572, +), ADediting_385437(114287868, +), ADediting_385438(114287870, +), ADediting_385439(114287871, +), ADediting_385440(114287906, +), ADediting_385441(114287936, +), ADediting_385442(114287946, +), ADediting_385443(114287948, +), ADediting_385444(114287952, +), ADediting_385445(114287979, +), ADediting_385446(114288067, +), ADediting_385447(114288201, +), ADediting_385448(114289264, +), ADediting_385449(114289270, +), ADediting_385450(114289271, +), ADediting_385451(114289276, +), ADediting_385452(114289284, +), ADediting_385453(114289301, +), ADediting_385454(114289315, +), ADediting_385455(114289362, +), ADediting_385456(114289363, +), ADediting_385457(114289364, +), ADediting_385458(114289366, +), ADediting_385459(114289368, +), ADediting_385460(114289374, +), ADediting_385461(114289377, +), ADediting_385462(114289390, +), ADediting_385463(114289403, +), ADediting_385464(114289413, +), ADediting_385465(114289444, +), ADediting_385466(114289463, +), ADediting_385467(114289469, +), ADediting_385468(114289474, +), ADediting_385469(114289479, +), ADediting_385470(114289507, +), ADediting_385471(114290797, +), ADediting_385472(114290798, +), ADediting_385473(114290814, +), ADediting_385474(114290833, +), ADediting_385475(114290834, +), ADediting_385476(114290837, +), ADediting_385477(114290851, +), ADediting_385478(114290863, +), ADediting_385479(114290873, +), ADediting_385480(114290875, +), ADediting_385481(114290899, +), ADediting_385482(114290918, +), ADediting_385483(114290963, +), ADediting_385484(114290995, +), ADediting_385485(114290996, +), ADediting_385486(114290997, +), ADediting_385487(114291009, +), ADediting_385488(114292951, +), ADediting_385489(114292978, +), ADediting_385490(114292992, +), ADediting_385491(114292993, +), ADediting_385492(114292997, +), ADediting_385493(114293013, +), ADediting_385494(114293022, +), ADediting_385495(114293122, +), ADediting_385496(114293126, +), ADediting_385497(114293145, +), ADediting_385498(114293286, +), ADediting_385499(114293309, +), ADediting_385500(114293851, +), ADediting_385501(114293864, +), ADediting_385502(114293866, +), ADediting_385503(114293867, +), ADediting_385504(114293883, +), ADediting_385505(114293907, +), ADediting_385506(114293912, +), ADediting_385507(114293920, +), ADediting_385508(114293921, +), ADediting_385509(114293938, +), ADediting_385510(114293968, +), ADediting_385511(114293986, +), ADediting_385512(114293993, +), ADediting_385513(114294006, +), ADediting_385514(114294014, +), ADediting_385515(114294018, +), ADediting_385516(114294019, +), ADediting_385517(114294023, +), ADediting_385518(114294044, +), ADediting_385519(114294045, +), ADediting_385520(114294046, +), ADediting_385521(114294058, +), ADediting_385522(114294060, +), ADediting_385523(114294290, +), ADediting_385524(114294292, +), ADediting_385525(114294300, +), ADediting_385526(114294308, +), ADediting_385527(114294338, +), ADediting_385528(114294343, +), ADediting_385529(114294348, +), ADediting_385530(114294355, +), ADediting_385531(114294362, +), ADediting_385532(114294368, +), ADediting_385533(114294369, +), ADediting_385534(114294386, +), ADediting_385535(114294415, +), ADediting_385536(114294449, +), ADediting_385537(114294464, +), ADediting_385538(114294486, +), ADediting_385539(114294523, +), ADediting_385540(114294731, +), ADediting_385541(114294745, +), ADediting_385542(114294746, +), ADediting_385543(114294807, +), ADediting_385544(114294851, +), ADediting_385545(114294896, +), ADediting_385546(114294991, +), ADediting_385547(114295014, +), ADediting_385548(114295018, +), ADediting_385549(114295033, +), ADediting_385550(114295167, +), ADediting_385551(114295289, +), ADediting_385552(114296113, +), ADediting_385553(114296156, +), ADediting_385554(114296206, +), ADediting_385555(114296308, +), ADediting_385556(114298294, +), ADediting_385557(114298446, +), ADediting_385558(114300396, +), ADediting_385559(114300508, +), ADediting_385560(114300514, +), ADediting_385561(114300583, +), ADediting_385562(114300609, +), ADediting_385563(114300644, +), ADediting_385564(114300669, +), ADediting_385565(114300728, +), ADediting_385566(114300739, +), ADediting_385567(114300748, +), ADediting_385568(114300800, +), ADediting_385569(114300801, +), ADediting_385570(114300813, +), ADediting_385571(114301011, +), ADediting_385572(114301020, +), ADediting_385573(114301087, +), ADediting_385574(114301198, +), ADediting_385575(114301200, +), ADediting_385576(114301206, +), ADediting_385577(114301207, +), ADediting_385578(114301245, +), ADediting_385579(114301269, +), ADediting_385580(114301278, +), ADediting_385581(114301284, +), ADediting_385582(114301316, +), ADediting_385583(114301342, +), ADediting_385584(114301348, +), ADediting_385585(114301365, +), ADediting_385586(114301369, +), ADediting_1534806(114284185, +), ADediting_1534807(114284296, +), ADediting_1534808(114290969, +), ADediting_1534809(114293174, +), ADediting_1534810(114301074, +), ADediting_1616038(114284307, +), |
Top |
RNA editing positional annotations for UPF3A using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_385341 | chr13_114283046_+ | intronic |
| ADediting_385342 | chr13_114283078_+ | intronic |
| ADediting_385343 | chr13_114283081_+ | intronic |
| ADediting_385344 | chr13_114283088_+ | intronic |
| ADediting_385345 | chr13_114283103_+ | intronic |
| ADediting_385346 | chr13_114283121_+ | intronic |
| ADediting_385347 | chr13_114283122_+ | intronic |
| ADediting_385348 | chr13_114283141_+ | intronic |
| ADediting_385349 | chr13_114283145_+ | intronic |
| ADediting_385350 | chr13_114283148_+ | intronic |
| ADediting_385351 | chr13_114283155_+ | intronic |
| ADediting_385352 | chr13_114283157_+ | intronic |
| ADediting_385353 | chr13_114283202_+ | intronic |
| ADediting_385354 | chr13_114283217_+ | intronic |
| ADediting_385355 | chr13_114283229_+ | intronic |
| ADediting_385356 | chr13_114283242_+ | intronic |
| ADediting_385357 | chr13_114283255_+ | intronic |
| ADediting_385358 | chr13_114283267_+ | intronic |
| ADediting_385359 | chr13_114283272_+ | intronic |
| ADediting_385360 | chr13_114283280_+ | intronic |
| ADediting_385361 | chr13_114283281_+ | intronic |
| ADediting_385362 | chr13_114283282_+ | intronic |
| ADediting_385363 | chr13_114283294_+ | intronic |
| ADediting_385364 | chr13_114284100_+ | intronic |
| ADediting_385365 | chr13_114284102_+ | intronic |
| ADediting_385366 | chr13_114284108_+ | intronic |
| ADediting_385367 | chr13_114284109_+ | intronic |
| ADediting_385368 | chr13_114284114_+ | intronic |
| ADediting_385369 | chr13_114284122_+ | intronic |
| ADediting_385370 | chr13_114284130_+ | intronic |
| ADediting_385371 | chr13_114284131_+ | intronic |
| ADediting_385372 | chr13_114284144_+ | intronic |
| ADediting_385373 | chr13_114284152_+ | intronic |
| ADediting_385374 | chr13_114284155_+ | intronic |
| ADediting_385375 | chr13_114284172_+ | intronic |
| ADediting_385376 | chr13_114284175_+ | intronic |
| ADediting_385377 | chr13_114284176_+ | intronic |
| ADediting_385378 | chr13_114284204_+ | intronic |
| ADediting_385379 | chr13_114284206_+ | intronic |
| ADediting_385380 | chr13_114284215_+ | intronic |
| ADediting_385381 | chr13_114284219_+ | intronic |
| ADediting_385382 | chr13_114284231_+ | intronic |
| ADediting_385383 | chr13_114284241_+ | intronic |
| ADediting_385384 | chr13_114284247_+ | intronic |
| ADediting_385385 | chr13_114284251_+ | intronic |
| ADediting_385386 | chr13_114284282_+ | intronic |
| ADediting_385387 | chr13_114284283_+ | intronic |
| ADediting_385388 | chr13_114284317_+ | intronic |
| ADediting_385389 | chr13_114284322_+ | intronic |
| ADediting_385390 | chr13_114284419_+ | intronic |
| ADediting_385391 | chr13_114284433_+ | intronic |
| ADediting_385392 | chr13_114284441_+ | intronic |
| ADediting_385393 | chr13_114284477_+ | intronic |
| ADediting_385394 | chr13_114284578_+ | intronic |
| ADediting_385395 | chr13_114284579_+ | intronic |
| ADediting_385396 | chr13_114284620_+ | intronic |
| ADediting_385397 | chr13_114284662_+ | intronic |
| ADediting_385398 | chr13_114284836_+ | intronic |
| ADediting_385399 | chr13_114284850_+ | intronic |
| ADediting_385400 | chr13_114284853_+ | intronic |
| ADediting_385401 | chr13_114284862_+ | intronic |
| ADediting_385402 | chr13_114284873_+ | intronic |
| ADediting_385403 | chr13_114284901_+ | intronic |
| ADediting_385404 | chr13_114284914_+ | intronic |
| ADediting_385405 | chr13_114284915_+ | intronic |
| ADediting_385406 | chr13_114284916_+ | intronic |
| ADediting_385407 | chr13_114285389_+ | intronic |
| ADediting_385408 | chr13_114287372_+ | intronic |
| ADediting_385409 | chr13_114287375_+ | intronic |
| ADediting_385410 | chr13_114287380_+ | intronic |
| ADediting_385411 | chr13_114287391_+ | intronic |
| ADediting_385412 | chr13_114287406_+ | intronic |
| ADediting_385413 | chr13_114287414_+ | intronic |
| ADediting_385414 | chr13_114287429_+ | intronic |
| ADediting_385415 | chr13_114287430_+ | intronic |
| ADediting_385416 | chr13_114287436_+ | intronic |
| ADediting_385417 | chr13_114287437_+ | intronic |
| ADediting_385418 | chr13_114287440_+ | intronic |
| ADediting_385419 | chr13_114287441_+ | intronic |
| ADediting_385420 | chr13_114287444_+ | intronic |
| ADediting_385421 | chr13_114287447_+ | intronic |
| ADediting_385422 | chr13_114287452_+ | intronic |
| ADediting_385423 | chr13_114287468_+ | intronic |
| ADediting_385424 | chr13_114287470_+ | intronic |
| ADediting_385425 | chr13_114287476_+ | intronic |
| ADediting_385426 | chr13_114287480_+ | intronic |
| ADediting_385427 | chr13_114287484_+ | intronic |
| ADediting_385428 | chr13_114287497_+ | intronic |
| ADediting_385429 | chr13_114287512_+ | intronic |
| ADediting_385430 | chr13_114287516_+ | intronic |
| ADediting_385431 | chr13_114287519_+ | intronic |
| ADediting_385432 | chr13_114287532_+ | intronic |
| ADediting_385433 | chr13_114287536_+ | intronic |
| ADediting_385434 | chr13_114287543_+ | intronic |
| ADediting_385435 | chr13_114287548_+ | intronic |
| ADediting_385436 | chr13_114287572_+ | intronic |
| ADediting_385437 | chr13_114287868_+ | intronic |
| ADediting_385438 | chr13_114287870_+ | intronic |
| ADediting_385439 | chr13_114287871_+ | intronic |
| ADediting_385440 | chr13_114287906_+ | intronic |
| ADediting_385441 | chr13_114287936_+ | intronic |
| ADediting_385442 | chr13_114287946_+ | intronic |
| ADediting_385443 | chr13_114287948_+ | intronic |
| ADediting_385444 | chr13_114287952_+ | intronic |
| ADediting_385445 | chr13_114287979_+ | intronic |
| ADediting_385446 | chr13_114288067_+ | intronic |
| ADediting_385447 | chr13_114288201_+ | intronic |
| ADediting_385448 | chr13_114289264_+ | intronic |
| ADediting_385449 | chr13_114289270_+ | intronic |
| ADediting_385450 | chr13_114289271_+ | intronic |
| ADediting_385451 | chr13_114289276_+ | intronic |
| ADediting_385452 | chr13_114289284_+ | intronic |
| ADediting_385453 | chr13_114289301_+ | intronic |
| ADediting_385454 | chr13_114289315_+ | intronic |
| ADediting_385455 | chr13_114289362_+ | intronic |
| ADediting_385456 | chr13_114289363_+ | intronic |
| ADediting_385457 | chr13_114289364_+ | intronic |
| ADediting_385458 | chr13_114289366_+ | intronic |
| ADediting_385459 | chr13_114289368_+ | intronic |
| ADediting_385460 | chr13_114289374_+ | intronic |
| ADediting_385461 | chr13_114289377_+ | intronic |
| ADediting_385462 | chr13_114289390_+ | intronic |
| ADediting_385463 | chr13_114289403_+ | intronic |
| ADediting_385464 | chr13_114289413_+ | intronic |
| ADediting_385465 | chr13_114289444_+ | intronic |
| ADediting_385466 | chr13_114289463_+ | intronic |
| ADediting_385467 | chr13_114289469_+ | intronic |
| ADediting_385468 | chr13_114289474_+ | intronic |
| ADediting_385469 | chr13_114289479_+ | intronic |
| ADediting_385470 | chr13_114289507_+ | intronic |
| ADediting_385471 | chr13_114290797_+ | intronic |
| ADediting_385472 | chr13_114290798_+ | intronic |
| ADediting_385473 | chr13_114290814_+ | intronic |
| ADediting_385474 | chr13_114290833_+ | intronic |
| ADediting_385475 | chr13_114290834_+ | intronic |
| ADediting_385476 | chr13_114290837_+ | intronic |
| ADediting_385477 | chr13_114290851_+ | intronic |
| ADediting_385478 | chr13_114290863_+ | intronic |
| ADediting_385479 | chr13_114290873_+ | intronic |
| ADediting_385480 | chr13_114290875_+ | intronic |
| ADediting_385481 | chr13_114290899_+ | intronic |
| ADediting_385482 | chr13_114290918_+ | intronic |
| ADediting_385483 | chr13_114290963_+ | intronic |
| ADediting_385484 | chr13_114290995_+ | intronic |
| ADediting_385485 | chr13_114290996_+ | intronic |
| ADediting_385486 | chr13_114290997_+ | intronic |
| ADediting_385487 | chr13_114291009_+ | intronic |
| ADediting_385488 | chr13_114292951_+ | intronic |
| ADediting_385489 | chr13_114292978_+ | intronic |
| ADediting_385490 | chr13_114292992_+ | intronic |
| ADediting_385491 | chr13_114292993_+ | intronic |
| ADediting_385492 | chr13_114292997_+ | intronic |
| ADediting_385493 | chr13_114293013_+ | intronic |
| ADediting_385494 | chr13_114293022_+ | intronic |
| ADediting_385495 | chr13_114293122_+ | intronic |
| ADediting_385496 | chr13_114293126_+ | intronic |
| ADediting_385497 | chr13_114293145_+ | intronic |
| ADediting_385498 | chr13_114293286_+ | intronic |
| ADediting_385499 | chr13_114293309_+ | intronic |
| ADediting_385500 | chr13_114293851_+ | intronic |
| ADediting_385501 | chr13_114293864_+ | intronic |
| ADediting_385502 | chr13_114293866_+ | intronic |
| ADediting_385503 | chr13_114293867_+ | intronic |
| ADediting_385504 | chr13_114293883_+ | intronic |
| ADediting_385505 | chr13_114293907_+ | intronic |
| ADediting_385506 | chr13_114293912_+ | intronic |
| ADediting_385507 | chr13_114293920_+ | intronic |
| ADediting_385508 | chr13_114293921_+ | intronic |
| ADediting_385509 | chr13_114293938_+ | intronic |
| ADediting_385510 | chr13_114293968_+ | intronic |
| ADediting_385511 | chr13_114293986_+ | intronic |
| ADediting_385512 | chr13_114293993_+ | intronic |
| ADediting_385513 | chr13_114294006_+ | intronic |
| ADediting_385514 | chr13_114294014_+ | intronic |
| ADediting_385515 | chr13_114294018_+ | intronic |
| ADediting_385516 | chr13_114294019_+ | intronic |
| ADediting_385517 | chr13_114294023_+ | intronic |
| ADediting_385518 | chr13_114294044_+ | intronic |
| ADediting_385519 | chr13_114294045_+ | intronic |
| ADediting_385520 | chr13_114294046_+ | intronic |
| ADediting_385521 | chr13_114294058_+ | intronic |
| ADediting_385522 | chr13_114294060_+ | intronic |
| ADediting_385523 | chr13_114294290_+ | intronic |
| ADediting_385524 | chr13_114294292_+ | intronic |
| ADediting_385525 | chr13_114294300_+ | intronic |
| ADediting_385526 | chr13_114294308_+ | intronic |
| ADediting_385527 | chr13_114294338_+ | intronic |
| ADediting_385528 | chr13_114294343_+ | intronic |
| ADediting_385529 | chr13_114294348_+ | intronic |
| ADediting_385530 | chr13_114294355_+ | intronic |
| ADediting_385531 | chr13_114294362_+ | intronic |
| ADediting_385532 | chr13_114294368_+ | intronic |
| ADediting_385533 | chr13_114294369_+ | intronic |
| ADediting_385534 | chr13_114294386_+ | intronic |
| ADediting_385535 | chr13_114294415_+ | intronic |
| ADediting_385536 | chr13_114294449_+ | intronic |
| ADediting_385537 | chr13_114294464_+ | intronic |
| ADediting_385538 | chr13_114294486_+ | intronic |
| ADediting_385539 | chr13_114294523_+ | intronic |
| ADediting_385540 | chr13_114294731_+ | intronic |
| ADediting_385541 | chr13_114294745_+ | intronic |
| ADediting_385542 | chr13_114294746_+ | intronic |
| ADediting_385543 | chr13_114294807_+ | intronic |
| ADediting_385544 | chr13_114294851_+ | intronic |
| ADediting_385545 | chr13_114294896_+ | intronic |
| ADediting_385546 | chr13_114294991_+ | intronic |
| ADediting_385547 | chr13_114295014_+ | intronic |
| ADediting_385548 | chr13_114295018_+ | intronic |
| ADediting_385549 | chr13_114295033_+ | intronic |
| ADediting_385550 | chr13_114295167_+ | intronic |
| ADediting_385551 | chr13_114295289_+ | intronic |
| ADediting_385552 | chr13_114296113_+ | intronic |
| ADediting_385553 | chr13_114296156_+ | intronic |
| ADediting_385554 | chr13_114296206_+ | intronic |
| ADediting_385555 | chr13_114296308_+ | intronic |
| ADediting_385556 | chr13_114298294_+ | intronic |
| ADediting_385557 | chr13_114298446_+ | intronic |
| ADediting_385558 | chr13_114300396_+ | intronic |
| ADediting_385559 | chr13_114300508_+ | intronic |
| ADediting_385560 | chr13_114300514_+ | intronic |
| ADediting_385561 | chr13_114300583_+ | intronic |
| ADediting_385562 | chr13_114300609_+ | intronic |
| ADediting_385563 | chr13_114300644_+ | intronic |
| ADediting_385564 | chr13_114300669_+ | intronic |
| ADediting_385565 | chr13_114300728_+ | intronic |
| ADediting_385566 | chr13_114300739_+ | intronic |
| ADediting_385567 | chr13_114300748_+ | intronic |
| ADediting_385568 | chr13_114300800_+ | intronic |
| ADediting_385569 | chr13_114300801_+ | intronic |
| ADediting_385570 | chr13_114300813_+ | intronic |
| ADediting_385571 | chr13_114301011_+ | intronic |
| ADediting_385572 | chr13_114301020_+ | intronic |
| ADediting_385573 | chr13_114301087_+ | intronic |
| ADediting_385574 | chr13_114301198_+ | intronic |
| ADediting_385575 | chr13_114301200_+ | intronic |
| ADediting_385576 | chr13_114301206_+ | intronic |
| ADediting_385577 | chr13_114301207_+ | intronic |
| ADediting_385578 | chr13_114301245_+ | intronic |
| ADediting_385579 | chr13_114301269_+ | intronic |
| ADediting_385580 | chr13_114301278_+ | intronic |
| ADediting_385581 | chr13_114301284_+ | intronic |
| ADediting_385582 | chr13_114301316_+ | intronic |
| ADediting_385583 | chr13_114301342_+ | intronic |
| ADediting_385584 | chr13_114301348_+ | intronic |
| ADediting_385585 | chr13_114301365_+ | intronic |
| ADediting_385586 | chr13_114301369_+ | intronic |
| ADediting_1534806 | chr13_114284185_+ | intronic |
| ADediting_1534807 | chr13_114284296_+ | intronic |
| ADediting_1534808 | chr13_114290969_+ | intronic |
| ADediting_1534809 | chr13_114293174_+ | intronic |
| ADediting_1534810 | chr13_114301074_+ | intronic |
| ADediting_1616038 | chr13_114284307_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_385341 | chr13_114283046_+ | SINE | Alu | Name=AluJr |
| ADediting_385342 | chr13_114283078_+ | SINE | Alu | Name=AluJr |
| ADediting_385343 | chr13_114283081_+ | SINE | Alu | Name=AluJr |
| ADediting_385344 | chr13_114283088_+ | SINE | Alu | Name=AluJr |
| ADediting_385345 | chr13_114283103_+ | SINE | Alu | Name=AluJr |
| ADediting_385346 | chr13_114283121_+ | SINE | Alu | Name=AluJr |
| ADediting_385347 | chr13_114283122_+ | SINE | Alu | Name=AluJr |
| ADediting_385348 | chr13_114283141_+ | SINE | Alu | Name=AluJr |
| ADediting_385349 | chr13_114283145_+ | SINE | Alu | Name=AluJr |
| ADediting_385350 | chr13_114283148_+ | SINE | Alu | Name=AluJr |
| ADediting_385351 | chr13_114283155_+ | SINE | Alu | Name=AluJr |
| ADediting_385352 | chr13_114283157_+ | SINE | Alu | Name=AluJr |
| ADediting_385353 | chr13_114283202_+ | SINE | Alu | Name=AluJr |
| ADediting_385354 | chr13_114283217_+ | SINE | Alu | Name=AluJr |
| ADediting_385355 | chr13_114283229_+ | SINE | Alu | Name=AluJr |
| ADediting_385356 | chr13_114283242_+ | SINE | Alu | Name=AluJr |
| ADediting_385357 | chr13_114283255_+ | SINE | Alu | Name=AluJr |
| ADediting_385358 | chr13_114283267_+ | SINE | Alu | Name=AluJr |
| ADediting_385359 | chr13_114283272_+ | SINE | Alu | Name=AluJr |
| ADediting_385360 | chr13_114283280_+ | SINE | Alu | Name=AluJr |
| ADediting_385361 | chr13_114283281_+ | SINE | Alu | Name=AluJr |
| ADediting_385362 | chr13_114283282_+ | SINE | Alu | Name=AluJr |
| ADediting_385363 | chr13_114283294_+ | SINE | Alu | Name=AluJr |
| ADediting_385364 | chr13_114284100_+ | SINE | Alu | Name=AluSg |
| ADediting_385365 | chr13_114284102_+ | SINE | Alu | Name=AluSg |
| ADediting_385366 | chr13_114284108_+ | SINE | Alu | Name=AluSg |
| ADediting_385367 | chr13_114284109_+ | SINE | Alu | Name=AluSg |
| ADediting_385368 | chr13_114284114_+ | SINE | Alu | Name=AluSg |
| ADediting_385369 | chr13_114284122_+ | SINE | Alu | Name=AluSg |
| ADediting_385370 | chr13_114284130_+ | SINE | Alu | Name=AluSg |
| ADediting_385371 | chr13_114284131_+ | SINE | Alu | Name=AluSg |
| ADediting_385372 | chr13_114284144_+ | SINE | Alu | Name=AluSg |
| ADediting_385373 | chr13_114284152_+ | SINE | Alu | Name=AluSg |
| ADediting_385374 | chr13_114284155_+ | SINE | Alu | Name=AluSg |
| ADediting_385375 | chr13_114284172_+ | SINE | Alu | Name=AluSg |
| ADediting_385376 | chr13_114284175_+ | SINE | Alu | Name=AluSg |
| ADediting_385377 | chr13_114284176_+ | SINE | Alu | Name=AluSg |
| ADediting_385378 | chr13_114284204_+ | SINE | Alu | Name=AluSg |
| ADediting_385379 | chr13_114284206_+ | SINE | Alu | Name=AluSg |
| ADediting_385380 | chr13_114284215_+ | SINE | Alu | Name=AluSg |
| ADediting_385381 | chr13_114284219_+ | SINE | Alu | Name=AluSg |
| ADediting_385382 | chr13_114284231_+ | SINE | Alu | Name=AluSg |
| ADediting_385383 | chr13_114284241_+ | SINE | Alu | Name=AluSg |
| ADediting_385384 | chr13_114284247_+ | SINE | Alu | Name=AluSg |
| ADediting_385385 | chr13_114284251_+ | SINE | Alu | Name=AluSg |
| ADediting_385386 | chr13_114284282_+ | SINE | Alu | Name=AluSg |
| ADediting_385387 | chr13_114284283_+ | SINE | Alu | Name=AluSg |
| ADediting_385388 | chr13_114284317_+ | SINE | Alu | Name=AluSg |
| ADediting_385389 | chr13_114284322_+ | SINE | Alu | Name=AluSg |
| ADediting_385390 | chr13_114284419_+ | SINE | Alu | Name=AluSz |
| ADediting_385391 | chr13_114284433_+ | SINE | Alu | Name=AluSz |
| ADediting_385392 | chr13_114284441_+ | SINE | Alu | Name=AluSz |
| ADediting_385393 | chr13_114284477_+ | SINE | Alu | Name=AluSz |
| ADediting_385394 | chr13_114284578_+ | SINE | Alu | Name=AluSz |
| ADediting_385395 | chr13_114284579_+ | SINE | Alu | Name=AluSz |
| ADediting_385396 | chr13_114284620_+ | SINE | Alu | Name=AluSz |
| ADediting_385397 | chr13_114284662_+ | SINE | Alu | Name=AluSz |
| ADediting_385398 | chr13_114284836_+ | SINE | Alu | Name=FLAM_C |
| ADediting_385399 | chr13_114284850_+ | SINE | Alu | Name=FLAM_C |
| ADediting_385400 | chr13_114284853_+ | SINE | Alu | Name=FLAM_C |
| ADediting_385401 | chr13_114284862_+ | SINE | Alu | Name=FLAM_C |
| ADediting_385402 | chr13_114284873_+ | SINE | Alu | Name=FLAM_C |
| ADediting_385403 | chr13_114284901_+ | SINE | Alu | Name=FLAM_C |
| ADediting_385404 | chr13_114284914_+ | SINE | Alu | Name=FLAM_C |
| ADediting_385405 | chr13_114284915_+ | SINE | Alu | Name=FLAM_C |
| ADediting_385406 | chr13_114284916_+ | SINE | Alu | Name=FLAM_C |
| ADediting_385407 | chr13_114285389_+ | LINE | L2 | Name=L2b |
| ADediting_385408 | chr13_114287372_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385409 | chr13_114287375_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385410 | chr13_114287380_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385411 | chr13_114287391_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385412 | chr13_114287406_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385413 | chr13_114287414_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385414 | chr13_114287429_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385415 | chr13_114287430_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385416 | chr13_114287436_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385417 | chr13_114287437_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385418 | chr13_114287440_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385419 | chr13_114287441_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385420 | chr13_114287444_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385421 | chr13_114287447_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385422 | chr13_114287452_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385423 | chr13_114287468_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385424 | chr13_114287470_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385425 | chr13_114287476_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385426 | chr13_114287480_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385427 | chr13_114287484_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385428 | chr13_114287497_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385429 | chr13_114287512_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385430 | chr13_114287516_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385431 | chr13_114287519_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385432 | chr13_114287532_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385433 | chr13_114287536_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385434 | chr13_114287543_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385435 | chr13_114287548_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385436 | chr13_114287572_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385437 | chr13_114287868_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385438 | chr13_114287870_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385439 | chr13_114287871_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385440 | chr13_114287906_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385441 | chr13_114287936_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385442 | chr13_114287946_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385443 | chr13_114287948_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385444 | chr13_114287952_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385445 | chr13_114287979_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385446 | chr13_114288067_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385448 | chr13_114289264_+ | SINE | Alu | Name=AluSc |
| ADediting_385449 | chr13_114289270_+ | SINE | Alu | Name=AluSc |
| ADediting_385450 | chr13_114289271_+ | SINE | Alu | Name=AluSc |
| ADediting_385451 | chr13_114289276_+ | SINE | Alu | Name=AluSc |
| ADediting_385452 | chr13_114289284_+ | SINE | Alu | Name=AluSc |
| ADediting_385453 | chr13_114289301_+ | SINE | Alu | Name=AluSc |
| ADediting_385454 | chr13_114289315_+ | SINE | Alu | Name=AluSc |
| ADediting_385455 | chr13_114289362_+ | SINE | Alu | Name=AluSc |
| ADediting_385456 | chr13_114289363_+ | SINE | Alu | Name=AluSc |
| ADediting_385457 | chr13_114289364_+ | SINE | Alu | Name=AluSc |
| ADediting_385458 | chr13_114289366_+ | SINE | Alu | Name=AluSc |
| ADediting_385459 | chr13_114289368_+ | SINE | Alu | Name=AluSc |
| ADediting_385460 | chr13_114289374_+ | SINE | Alu | Name=AluSc |
| ADediting_385461 | chr13_114289377_+ | SINE | Alu | Name=AluSc |
| ADediting_385462 | chr13_114289390_+ | SINE | Alu | Name=AluSc |
| ADediting_385463 | chr13_114289403_+ | SINE | Alu | Name=AluSc |
| ADediting_385464 | chr13_114289413_+ | SINE | Alu | Name=AluSc |
| ADediting_385465 | chr13_114289444_+ | SINE | Alu | Name=AluSc |
| ADediting_385466 | chr13_114289463_+ | SINE | Alu | Name=AluSc |
| ADediting_385467 | chr13_114289469_+ | SINE | Alu | Name=AluSc |
| ADediting_385468 | chr13_114289474_+ | SINE | Alu | Name=AluSc |
| ADediting_385469 | chr13_114289479_+ | SINE | Alu | Name=AluSc |
| ADediting_385470 | chr13_114289507_+ | SINE | Alu | Name=AluSc |
| ADediting_385471 | chr13_114290797_+ | SINE | Alu | Name=AluSp |
| ADediting_385472 | chr13_114290798_+ | SINE | Alu | Name=AluSp |
| ADediting_385473 | chr13_114290814_+ | SINE | Alu | Name=AluSp |
| ADediting_385474 | chr13_114290833_+ | SINE | Alu | Name=AluSp |
| ADediting_385475 | chr13_114290834_+ | SINE | Alu | Name=AluSp |
| ADediting_385476 | chr13_114290837_+ | SINE | Alu | Name=AluSp |
| ADediting_385477 | chr13_114290851_+ | SINE | Alu | Name=AluSp |
| ADediting_385478 | chr13_114290863_+ | SINE | Alu | Name=AluSp |
| ADediting_385479 | chr13_114290873_+ | SINE | Alu | Name=AluSp |
| ADediting_385480 | chr13_114290875_+ | SINE | Alu | Name=AluSp |
| ADediting_385481 | chr13_114290899_+ | SINE | Alu | Name=AluSp |
| ADediting_385482 | chr13_114290918_+ | SINE | Alu | Name=AluSp |
| ADediting_385483 | chr13_114290963_+ | SINE | Alu | Name=AluSp |
| ADediting_385484 | chr13_114290995_+ | SINE | Alu | Name=AluSp |
| ADediting_385485 | chr13_114290996_+ | SINE | Alu | Name=AluSp |
| ADediting_385486 | chr13_114290997_+ | SINE | Alu | Name=AluSp |
| ADediting_385487 | chr13_114291009_+ | SINE | Alu | Name=AluSp |
| ADediting_385488 | chr13_114292951_+ | SINE | Alu | Name=AluSg |
| ADediting_385489 | chr13_114292978_+ | SINE | Alu | Name=AluSg |
| ADediting_385490 | chr13_114292992_+ | SINE | Alu | Name=AluSg |
| ADediting_385491 | chr13_114292993_+ | SINE | Alu | Name=AluSg |
| ADediting_385492 | chr13_114292997_+ | SINE | Alu | Name=AluSg |
| ADediting_385493 | chr13_114293013_+ | SINE | Alu | Name=AluSg |
| ADediting_385494 | chr13_114293022_+ | SINE | Alu | Name=AluSg |
| ADediting_385495 | chr13_114293122_+ | SINE | Alu | Name=AluSz |
| ADediting_385496 | chr13_114293126_+ | SINE | Alu | Name=AluSz |
| ADediting_385497 | chr13_114293145_+ | SINE | Alu | Name=AluSz |
| ADediting_385498 | chr13_114293286_+ | SINE | Alu | Name=AluSz |
| ADediting_385499 | chr13_114293309_+ | SINE | Alu | Name=AluSz |
| ADediting_385500 | chr13_114293851_+ | SINE | Alu | Name=AluJo |
| ADediting_385501 | chr13_114293864_+ | SINE | Alu | Name=AluJo |
| ADediting_385502 | chr13_114293866_+ | SINE | Alu | Name=AluJo |
| ADediting_385503 | chr13_114293867_+ | SINE | Alu | Name=AluJo |
| ADediting_385504 | chr13_114293883_+ | SINE | Alu | Name=AluJo |
| ADediting_385505 | chr13_114293907_+ | SINE | Alu | Name=AluJo |
| ADediting_385506 | chr13_114293912_+ | SINE | Alu | Name=AluJo |
| ADediting_385507 | chr13_114293920_+ | SINE | Alu | Name=AluJo |
| ADediting_385508 | chr13_114293921_+ | SINE | Alu | Name=AluJo |
| ADediting_385509 | chr13_114293938_+ | SINE | Alu | Name=AluJo |
| ADediting_385510 | chr13_114293968_+ | SINE | Alu | Name=AluJb |
| ADediting_385511 | chr13_114293986_+ | SINE | Alu | Name=AluJb |
| ADediting_385512 | chr13_114293993_+ | SINE | Alu | Name=AluJb |
| ADediting_385513 | chr13_114294006_+ | SINE | Alu | Name=AluJb |
| ADediting_385514 | chr13_114294014_+ | SINE | Alu | Name=AluJb |
| ADediting_385515 | chr13_114294018_+ | SINE | Alu | Name=AluJb |
| ADediting_385516 | chr13_114294019_+ | SINE | Alu | Name=AluJb |
| ADediting_385517 | chr13_114294023_+ | SINE | Alu | Name=AluJb |
| ADediting_385518 | chr13_114294044_+ | SINE | Alu | Name=AluJb |
| ADediting_385519 | chr13_114294045_+ | SINE | Alu | Name=AluJb |
| ADediting_385520 | chr13_114294046_+ | SINE | Alu | Name=AluJb |
| ADediting_385521 | chr13_114294058_+ | SINE | Alu | Name=AluJb |
| ADediting_385522 | chr13_114294060_+ | SINE | Alu | Name=AluJb |
| ADediting_385523 | chr13_114294290_+ | SINE | Alu | Name=AluJb |
| ADediting_385524 | chr13_114294292_+ | SINE | Alu | Name=AluJb |
| ADediting_385525 | chr13_114294300_+ | SINE | Alu | Name=AluJb |
| ADediting_385526 | chr13_114294308_+ | SINE | Alu | Name=AluJb |
| ADediting_385527 | chr13_114294338_+ | SINE | Alu | Name=AluJb |
| ADediting_385528 | chr13_114294343_+ | SINE | Alu | Name=AluJb |
| ADediting_385529 | chr13_114294348_+ | SINE | Alu | Name=AluJb |
| ADediting_385530 | chr13_114294355_+ | SINE | Alu | Name=AluJb |
| ADediting_385531 | chr13_114294362_+ | SINE | Alu | Name=AluJb |
| ADediting_385532 | chr13_114294368_+ | SINE | Alu | Name=AluJb |
| ADediting_385533 | chr13_114294369_+ | SINE | Alu | Name=AluJb |
| ADediting_385534 | chr13_114294386_+ | SINE | Alu | Name=AluJb |
| ADediting_385535 | chr13_114294415_+ | SINE | Alu | Name=AluJb |
| ADediting_385536 | chr13_114294449_+ | SINE | Alu | Name=AluJb |
| ADediting_385537 | chr13_114294464_+ | SINE | Alu | Name=AluJb |
| ADediting_385538 | chr13_114294486_+ | SINE | Alu | Name=AluJb |
| ADediting_385539 | chr13_114294523_+ | SINE | Alu | Name=AluJb |
| ADediting_385540 | chr13_114294731_+ | SINE | Alu | Name=AluSc8 |
| ADediting_385541 | chr13_114294745_+ | SINE | Alu | Name=AluSc8 |
| ADediting_385542 | chr13_114294746_+ | SINE | Alu | Name=AluSc8 |
| ADediting_385543 | chr13_114294807_+ | SINE | Alu | Name=AluSc8 |
| ADediting_385544 | chr13_114294851_+ | SINE | Alu | Name=AluY |
| ADediting_385545 | chr13_114294896_+ | SINE | Alu | Name=AluY |
| ADediting_385546 | chr13_114294991_+ | SINE | Alu | Name=AluY |
| ADediting_385547 | chr13_114295014_+ | SINE | Alu | Name=AluY |
| ADediting_385548 | chr13_114295018_+ | SINE | Alu | Name=AluY |
| ADediting_385549 | chr13_114295033_+ | SINE | Alu | Name=AluY |
| ADediting_385552 | chr13_114296113_+ | SINE | Alu | Name=AluSx4 |
| ADediting_385553 | chr13_114296156_+ | SINE | Alu | Name=AluSx4 |
| ADediting_385554 | chr13_114296206_+ | SINE | Alu | Name=AluSx4 |
| ADediting_385555 | chr13_114296308_+ | SINE | Alu | Name=AluSx4 |
| ADediting_385556 | chr13_114298294_+ | SINE | Alu | Name=AluSq2 |
| ADediting_385557 | chr13_114298446_+ | SINE | Alu | Name=AluSx3 |
| ADediting_385558 | chr13_114300396_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385559 | chr13_114300508_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385560 | chr13_114300514_+ | SINE | Alu | Name=AluSx1 |
| ADediting_385561 | chr13_114300583_+ | SINE | Alu | Name=AluSp |
| ADediting_385562 | chr13_114300609_+ | SINE | Alu | Name=AluSp |
| ADediting_385563 | chr13_114300644_+ | SINE | Alu | Name=AluSp |
| ADediting_385564 | chr13_114300669_+ | SINE | Alu | Name=AluSp |
| ADediting_385565 | chr13_114300728_+ | SINE | Alu | Name=AluSp |
| ADediting_385566 | chr13_114300739_+ | SINE | Alu | Name=AluSp |
| ADediting_385567 | chr13_114300748_+ | SINE | Alu | Name=AluSp |
| ADediting_385568 | chr13_114300800_+ | SINE | Alu | Name=AluSp |
| ADediting_385569 | chr13_114300801_+ | SINE | Alu | Name=AluSp |
| ADediting_385570 | chr13_114300813_+ | SINE | Alu | Name=AluSp |
| ADediting_385571 | chr13_114301011_+ | SINE | Alu | Name=AluSx |
| ADediting_385572 | chr13_114301020_+ | SINE | Alu | Name=AluSx |
| ADediting_385573 | chr13_114301087_+ | SINE | Alu | Name=AluSx |
| ADediting_385574 | chr13_114301198_+ | SINE | Alu | Name=AluY |
| ADediting_385575 | chr13_114301200_+ | SINE | Alu | Name=AluY |
| ADediting_385576 | chr13_114301206_+ | SINE | Alu | Name=AluY |
| ADediting_385577 | chr13_114301207_+ | SINE | Alu | Name=AluY |
| ADediting_385578 | chr13_114301245_+ | SINE | Alu | Name=AluY |
| ADediting_385579 | chr13_114301269_+ | SINE | Alu | Name=AluY |
| ADediting_385580 | chr13_114301278_+ | SINE | Alu | Name=AluY |
| ADediting_385581 | chr13_114301284_+ | SINE | Alu | Name=AluY |
| ADediting_385582 | chr13_114301316_+ | SINE | Alu | Name=AluY |
| ADediting_385583 | chr13_114301342_+ | SINE | Alu | Name=AluY |
| ADediting_385584 | chr13_114301348_+ | SINE | Alu | Name=AluY |
| ADediting_385585 | chr13_114301365_+ | SINE | Alu | Name=AluY |
| ADediting_385586 | chr13_114301369_+ | SINE | Alu | Name=AluY |
| ADediting_1534806 | chr13_114284185_+ | SINE | Alu | Name=AluSg |
| ADediting_1534807 | chr13_114284296_+ | SINE | Alu | Name=AluSg |
| ADediting_1534808 | chr13_114290969_+ | SINE | Alu | Name=AluSp |
| ADediting_1534809 | chr13_114293174_+ | SINE | Alu | Name=AluSz |
| ADediting_1534810 | chr13_114301074_+ | SINE | Alu | Name=AluSx |
| ADediting_1616038 | chr13_114284307_+ | SINE | Alu | Name=AluSg |
Top |
RNA A-to-I editing events in the alternative splicing sites for UPF3A |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| A3SS | ADediting_385365 | chr13_114284102_+ | 114284096:114284118 | 3ss | 14i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACGCCTGTAATCCCAGCAC | 0.09 |
| A3SS | ADediting_385366 | chr13_114284108_+ | 114284096:114284118 | 3ss | 8i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTGATCCCAGCAC | 0.46 |
| A3SS | ADediting_385367 | chr13_114284109_+ | 114284096:114284118 | 3ss | 7i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAGTCCCAGCAC | -4.73 |
| A3SS | ADediting_385368 | chr13_114284114_+ | 114284096:114284118 | 3ss | 2i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAATCCCGGCAC | -8.10 |
| A3SS | ADediting_385369 | chr13_114284122_+ | 114284104:114284126 | 3ss | 2i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCAGCACTTTGGGAG | -8.98 |
| ES | ADediting_385365 | chr13_114284102_+ | 114284096:114284118 | 3ss | 14i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACGCCTGTAATCCCAGCAC | 0.09 |
| ES | ADediting_385365 | chr13_114284102_+ | 114284096:114284118 | 3ss | 14i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACGCCTGTAATCCCAGCAC | 0.09 |
| ES | ADediting_385365 | chr13_114284102_+ | 114284096:114284118 | 3ss | 14i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACGCCTGTAATCCCAGCAC | 0.09 |
| ES | ADediting_385366 | chr13_114284108_+ | 114284096:114284118 | 3ss | 8i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTGATCCCAGCAC | 0.46 |
| ES | ADediting_385366 | chr13_114284108_+ | 114284096:114284118 | 3ss | 8i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTGATCCCAGCAC | 0.46 |
| ES | ADediting_385366 | chr13_114284108_+ | 114284096:114284118 | 3ss | 8i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTGATCCCAGCAC | 0.46 |
| ES | ADediting_385366 | chr13_114284108_+ | 114284104:114284126 | 3ss | 16i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTGATCCCAGCACTTTAGGAG | -0.11 |
| ES | ADediting_385366 | chr13_114284108_+ | 114284104:114284126 | 3ss | 16i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTGATCCCAGCACTTTAGGAG | -0.11 |
| ES | ADediting_385366 | chr13_114284108_+ | 114284104:114284126 | 3ss | 16i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTGATCCCAGCACTTTAGGAG | -0.11 |
| ES | ADediting_385366 | chr13_114284108_+ | 114284104:114284126 | 3ss | 16i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTGATCCCAGCACTTTAGGAG | -0.11 |
| ES | ADediting_385366 | chr13_114284108_+ | 114284104:114284126 | 3ss | 16i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTGATCCCAGCACTTTAGGAG | -0.11 |
| ES | ADediting_385367 | chr13_114284109_+ | 114284096:114284118 | 3ss | 7i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAGTCCCAGCAC | -4.73 |
| ES | ADediting_385367 | chr13_114284109_+ | 114284096:114284118 | 3ss | 7i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAGTCCCAGCAC | -4.73 |
| ES | ADediting_385367 | chr13_114284109_+ | 114284096:114284118 | 3ss | 7i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAGTCCCAGCAC | -4.73 |
| ES | ADediting_385367 | chr13_114284109_+ | 114284104:114284126 | 3ss | 15i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAGTCCCAGCACTTTAGGAG | -1.77 |
| ES | ADediting_385367 | chr13_114284109_+ | 114284104:114284126 | 3ss | 15i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAGTCCCAGCACTTTAGGAG | -1.77 |
| ES | ADediting_385367 | chr13_114284109_+ | 114284104:114284126 | 3ss | 15i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAGTCCCAGCACTTTAGGAG | -1.77 |
| ES | ADediting_385367 | chr13_114284109_+ | 114284104:114284126 | 3ss | 15i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAGTCCCAGCACTTTAGGAG | -1.77 |
| ES | ADediting_385367 | chr13_114284109_+ | 114284104:114284126 | 3ss | 15i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAGTCCCAGCACTTTAGGAG | -1.77 |
| ES | ADediting_385368 | chr13_114284114_+ | 114284096:114284118 | 3ss | 2i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAATCCCGGCAC | -8.10 |
| ES | ADediting_385368 | chr13_114284114_+ | 114284096:114284118 | 3ss | 2i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAATCCCGGCAC | -8.10 |
| ES | ADediting_385368 | chr13_114284114_+ | 114284096:114284118 | 3ss | 2i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAATCCCGGCAC | -8.10 |
| ES | ADediting_385368 | chr13_114284114_+ | 114284104:114284126 | 3ss | 10i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCGGCACTTTAGGAG | 3.12 |
| ES | ADediting_385368 | chr13_114284114_+ | 114284104:114284126 | 3ss | 10i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCGGCACTTTAGGAG | 3.12 |
| ES | ADediting_385368 | chr13_114284114_+ | 114284104:114284126 | 3ss | 10i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCGGCACTTTAGGAG | 3.12 |
| ES | ADediting_385368 | chr13_114284114_+ | 114284104:114284126 | 3ss | 10i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCGGCACTTTAGGAG | 3.12 |
| ES | ADediting_385368 | chr13_114284114_+ | 114284104:114284126 | 3ss | 10i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCGGCACTTTAGGAG | 3.12 |
| ES | ADediting_385369 | chr13_114284122_+ | 114284104:114284126 | 3ss | 2i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCAGCACTTTGGGAG | -8.98 |
| ES | ADediting_385369 | chr13_114284122_+ | 114284104:114284126 | 3ss | 2i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCAGCACTTTGGGAG | -8.98 |
| ES | ADediting_385369 | chr13_114284122_+ | 114284104:114284126 | 3ss | 2i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCAGCACTTTGGGAG | -8.98 |
| ES | ADediting_385369 | chr13_114284122_+ | 114284104:114284126 | 3ss | 2i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCAGCACTTTGGGAG | -8.98 |
| ES | ADediting_385369 | chr13_114284122_+ | 114284104:114284126 | 3ss | 2i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCAGCACTTTGGGAG | -8.98 |
| ME1 | ADediting_385365 | chr13_114284102_+ | 114284096:114284118 | 3ss | 14i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACGCCTGTAATCCCAGCAC | 0.09 |
| ME1 | ADediting_385365 | chr13_114284102_+ | 114284096:114284118 | 3ss | 14i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACGCCTGTAATCCCAGCAC | 0.09 |
| ME1 | ADediting_385365 | chr13_114284102_+ | 114284096:114284118 | 3ss | 14i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACGCCTGTAATCCCAGCAC | 0.09 |
| ME1 | ADediting_385366 | chr13_114284108_+ | 114284096:114284118 | 3ss | 8i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTGATCCCAGCAC | 0.46 |
| ME1 | ADediting_385366 | chr13_114284108_+ | 114284096:114284118 | 3ss | 8i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTGATCCCAGCAC | 0.46 |
| ME1 | ADediting_385366 | chr13_114284108_+ | 114284096:114284118 | 3ss | 8i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTGATCCCAGCAC | 0.46 |
| ME1 | ADediting_385366 | chr13_114284108_+ | 114284104:114284126 | 3ss | 16i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTGATCCCAGCACTTTAGGAG | -0.11 |
| ME1 | ADediting_385366 | chr13_114284108_+ | 114284104:114284126 | 3ss | 16i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTGATCCCAGCACTTTAGGAG | -0.11 |
| ME1 | ADediting_385366 | chr13_114284108_+ | 114284104:114284126 | 3ss | 16i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTGATCCCAGCACTTTAGGAG | -0.11 |
| ME1 | ADediting_385366 | chr13_114284108_+ | 114284104:114284126 | 3ss | 16i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTGATCCCAGCACTTTAGGAG | -0.11 |
| ME1 | ADediting_385367 | chr13_114284109_+ | 114284096:114284118 | 3ss | 7i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAGTCCCAGCAC | -4.73 |
| ME1 | ADediting_385367 | chr13_114284109_+ | 114284096:114284118 | 3ss | 7i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAGTCCCAGCAC | -4.73 |
| ME1 | ADediting_385367 | chr13_114284109_+ | 114284096:114284118 | 3ss | 7i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAGTCCCAGCAC | -4.73 |
| ME1 | ADediting_385367 | chr13_114284109_+ | 114284104:114284126 | 3ss | 15i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAGTCCCAGCACTTTAGGAG | -1.77 |
| ME1 | ADediting_385367 | chr13_114284109_+ | 114284104:114284126 | 3ss | 15i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAGTCCCAGCACTTTAGGAG | -1.77 |
| ME1 | ADediting_385367 | chr13_114284109_+ | 114284104:114284126 | 3ss | 15i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAGTCCCAGCACTTTAGGAG | -1.77 |
| ME1 | ADediting_385367 | chr13_114284109_+ | 114284104:114284126 | 3ss | 15i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAGTCCCAGCACTTTAGGAG | -1.77 |
| ME1 | ADediting_385368 | chr13_114284114_+ | 114284096:114284118 | 3ss | 2i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAATCCCGGCAC | -8.10 |
| ME1 | ADediting_385368 | chr13_114284114_+ | 114284096:114284118 | 3ss | 2i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAATCCCGGCAC | -8.10 |
| ME1 | ADediting_385368 | chr13_114284114_+ | 114284096:114284118 | 3ss | 2i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAATCCCGGCAC | -8.10 |
| ME1 | ADediting_385368 | chr13_114284114_+ | 114284104:114284126 | 3ss | 10i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCGGCACTTTAGGAG | 3.12 |
| ME1 | ADediting_385368 | chr13_114284114_+ | 114284104:114284126 | 3ss | 10i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCGGCACTTTAGGAG | 3.12 |
| ME1 | ADediting_385368 | chr13_114284114_+ | 114284104:114284126 | 3ss | 10i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCGGCACTTTAGGAG | 3.12 |
| ME1 | ADediting_385368 | chr13_114284114_+ | 114284104:114284126 | 3ss | 10i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCGGCACTTTAGGAG | 3.12 |
| ME1 | ADediting_385369 | chr13_114284122_+ | 114284104:114284126 | 3ss | 2i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCAGCACTTTGGGAG | -8.98 |
| ME1 | ADediting_385369 | chr13_114284122_+ | 114284104:114284126 | 3ss | 2i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCAGCACTTTGGGAG | -8.98 |
| ME1 | ADediting_385369 | chr13_114284122_+ | 114284104:114284126 | 3ss | 2i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCAGCACTTTGGGAG | -8.98 |
| ME1 | ADediting_385369 | chr13_114284122_+ | 114284104:114284126 | 3ss | 2i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCAGCACTTTGGGAG | -8.98 |
| ME2 | ADediting_385365 | chr13_114284102_+ | 114284096:114284118 | 3ss | 14i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACGCCTGTAATCCCAGCAC | 0.09 |
| ME2 | ADediting_385365 | chr13_114284102_+ | 114284096:114284118 | 3ss | 14i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACGCCTGTAATCCCAGCAC | 0.09 |
| ME2 | ADediting_385365 | chr13_114284102_+ | 114284096:114284118 | 3ss | 14i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACGCCTGTAATCCCAGCAC | 0.09 |
| ME2 | ADediting_385366 | chr13_114284108_+ | 114284096:114284118 | 3ss | 8i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTGATCCCAGCAC | 0.46 |
| ME2 | ADediting_385366 | chr13_114284108_+ | 114284104:114284126 | 3ss | 16i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTGATCCCAGCACTTTAGGAG | -0.11 |
| ME2 | ADediting_385367 | chr13_114284109_+ | 114284096:114284118 | 3ss | 7i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAGTCCCAGCAC | -4.73 |
| ME2 | ADediting_385367 | chr13_114284109_+ | 114284096:114284118 | 3ss | 7i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAGTCCCAGCAC | -4.73 |
| ME2 | ADediting_385367 | chr13_114284109_+ | 114284104:114284126 | 3ss | 15i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAGTCCCAGCACTTTAGGAG | -1.77 |
| ME2 | ADediting_385367 | chr13_114284109_+ | 114284104:114284126 | 3ss | 15i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAGTCCCAGCACTTTAGGAG | -1.77 |
| ME2 | ADediting_385368 | chr13_114284114_+ | 114284096:114284118 | 3ss | 2i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAATCCCGGCAC | -8.10 |
| ME2 | ADediting_385368 | chr13_114284114_+ | 114284096:114284118 | 3ss | 2i | GCTCACACCTGTAATCCCAGCAC | -0.14 | GCTCACACCTGTAATCCCGGCAC | -8.10 |
| ME2 | ADediting_385368 | chr13_114284114_+ | 114284104:114284126 | 3ss | 10i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCGGCACTTTAGGAG | 3.12 |
| ME2 | ADediting_385369 | chr13_114284122_+ | 114284104:114284126 | 3ss | 2i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCAGCACTTTGGGAG | -8.98 |
| ME2 | ADediting_385369 | chr13_114284122_+ | 114284104:114284126 | 3ss | 2i | CTGTAATCCCAGCACTTTAGGAG | -1.03 | CTGTAATCCCAGCACTTTGGGAG | -8.98 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for UPF3A |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for UPF3A |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for UPF3A |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000169062.15 | ENST00000351487.5 | UPF3A-201 | hsa-miR-5688 | chr13 | 114305371 | 114305378 | 8mer-1a | 114305357 | 114305378 | 145 | -11.8 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000169062.15 | ENST00000375299.8 | UPF3A-202 | hsa-miR-5688 | chr13 | 114305371 | 114305378 | 8mer-1a | 114305357 | 114305378 | 145 | -11.8 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for UPF3A |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for UPF3A |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_385344 | chr13_114283088_+ | 0.000928663905903739 | 0.267654666278917 | 3.26023346833913e-06 | 0.369527531435243 | 0.0457703656358259 | 0.163364829187711 |
| CER | ADediting_385349 | chr13_114283145_+ | 0.0178217018713353 | 0.193242146337828 | 3.55808179015438e-06 | 0.368196438974504 | 0.0179475259780587 | 0.193033860180846 |
| CER | ADediting_385350 | chr13_114283148_+ | 0.00700274417967037 | 0.219332810809906 | 3.86930589601794e-06 | 0.366914099659909 | 0.00853075233760177 | 0.214059158980035 |
| CER | ADediting_385351 | chr13_114283155_+ | 0.000472848575546429 | 0.281966334611146 | 3.84045063425877e-10 | 0.483034879435716 | 0.0033175038135976 | 0.238307750874398 |
| CER | ADediting_385355 | chr13_114283229_+ | 0.0111443267866229 | 0.20672406013456 | 4.07846175483719e-05 | 0.328414761326114 | 0.0958198378854409 | 0.13648936231381 |
| CER | ADediting_385358 | chr13_114283267_+ | 0.00151640537827862 | 0.256746770392537 | 3.88220287465899e-07 | 0.400238226344118 | 0.00792771072602972 | 0.216031773321398 |
| CER | ADediting_385359 | chr13_114283272_+ | 0.012805405393029 | 0.20281688900432 | 4.50928417893941e-07 | 0.398175985139565 | 0.0246649329917185 | 0.183410342981615 |
| TCX | ADediting_385359 | chr13_114283272_+ | 0.0453271569591547 | 0.163695679881239 | 1.34214201950595e-06 | 0.382717153475784 | 0.00999436467705089 | -0.209741171950553 |
| CER | ADediting_385363 | chr13_114283294_+ | 0.224757372084667 | 0.0997075133950768 | 0.00018604766398478 | 0.300572293644459 | 0.00132173931259668 | 0.259849593807815 |
| CER | ADediting_385369 | chr13_114284122_+ | 0.00107120823414677 | 0.264525034673218 | 4.12256503288569e-09 | 0.457048100655741 | 0.00789869887791085 | 0.216129988034644 |
| CER | ADediting_385370 | chr13_114284130_+ | 4.08456222158135e-05 | 0.328388641038983 | 1.92486295711728e-12 | 0.534180051730652 | 0.0594060023777168 | 0.15429171002447 |
| TCX | ADediting_385370 | chr13_114284130_+ | 0.000258190175707805 | 0.294178975558108 | 2.42939228250589e-17 | 0.620637726603661 | 6.25397032925699e-05 | -0.320845165538428 |
| TCX | ADediting_385371 | chr13_114284131_+ | 0.442014751254711 | 0.0632380374647868 | 5.45449368875246e-06 | 0.36160490508358 | 0.0397842206150717 | -0.168080110300737 |
| CER | ADediting_385375 | chr13_114284172_+ | 0.00231165628525469 | 0.246983699679273 | 4.01581542600031e-05 | 0.328685137294731 | 0.597037495889956 | 0.0435088818788056 |
| TCX | ADediting_385375 | chr13_114284172_+ | 0.040012776273353 | 0.167889495148121 | 2.19668933608253e-06 | 0.375466879809201 | 0.00630253152818685 | -0.22210043602736 |
| CER | ADediting_385382 | chr13_114284231_+ | 9.75130210076191e-05 | 0.312760889485022 | 5.13662944418563e-09 | 0.454526441740422 | 0.00800696900689498 | 0.215765072903075 |
| TCX | ADediting_385382 | chr13_114284231_+ | 0.061791231972991 | 0.152885627732564 | 6.99410157656922e-06 | 0.357700544690811 | 0.167987737237586 | -0.113154959648334 |
| CER | ADediting_385383 | chr13_114284241_+ | 0.0384714779879917 | 0.169193105867767 | 1.02299999016128e-07 | 0.418018411146963 | 0.11368300959512 | 0.129696632601068 |
| CER | ADediting_385389 | chr13_114284322_+ | 0.000664119392218296 | 0.274860079278577 | 1.86809019903805e-07 | 0.410117555723087 | 0.0538560988693572 | 0.157752437077635 |
| DLPFC | ADediting_385401 | chr13_114284862_+ | 4.91334118372533e-05 | 0.228442808876206 | 2.54655247657975e-09 | 0.330211076253019 | 0.386000625584742 | -0.0494057275959486 |
| TCX | ADediting_385409 | chr13_114287375_+ | 0.00245890110609964 | 0.245521771383626 | 0.000171712579037561 | 0.302114364628163 | 0.15166405434874 | -0.117636587336791 |
| DLPFC | ADediting_385410 | chr13_114287380_+ | 0.000531990572203431 | 0.195634003804297 | 5.20528213650557e-08 | 0.303126378301891 | 0.602247838338394 | 0.029714009042175 |
| CER | ADediting_385416 | chr13_114287436_+ | 0.00372923371252132 | 0.235432010412749 | 0.000114660403308012 | 0.309754099902083 | 0.356892534924521 | 0.0757495631183486 |
| CER | ADediting_385418 | chr13_114287440_+ | 0.00589132298599474 | 0.22385625974219 | 6.92428361321678e-07 | 0.392190632197319 | 0.0703388040742491 | 0.14818598288302 |
| CER | ADediting_385419 | chr13_114287441_+ | 0.0453152548423736 | 0.163704601831936 | 5.43372574770491e-05 | 0.32335676991666 | 0.00829323655637143 | 0.214820887010326 |
| CER | ADediting_385420 | chr13_114287444_+ | 1.975246863834e-05 | 0.34081450501509 | 3.70604477136605e-12 | 0.528296065593415 | 0.000612085132051414 | 0.276584270549399 |
| CER | ADediting_385421 | chr13_114287447_+ | 8.56882333787244e-05 | 0.315137557030294 | 1.14986119829551e-09 | 0.471297483208274 | 0.0146542195168066 | 0.198959361518269 |
| DLPFC | ADediting_385423 | chr13_114287468_+ | 0.000285161024487854 | 0.204720603839193 | 6.23244615488785e-08 | 0.301420404468755 | 0.00084168127563605 | 0.188682218388906 |
| CER | ADediting_385423 | chr13_114287468_+ | 0.00533211378958254 | 0.226428400142262 | 5.45398313210064e-05 | 0.323290577213747 | 0.787653747231087 | 0.0221758432106424 |
| DLPFC | ADediting_385424 | chr13_114287470_+ | 0.000282866757877027 | 0.20483575988035 | 1.08879443199587e-08 | 0.317506563703503 | 0.00747105643341161 | 0.151667341844649 |
| DLPFC | ADediting_385426 | chr13_114287480_+ | 0.000329327906905453 | 0.202657174133997 | 3.204505164187e-08 | 0.307668015830143 | 0.116323871446848 | 0.0893747634894443 |
| DLPFC | ADediting_385427 | chr13_114287484_+ | 0.000113238601999271 | 0.21749968598625 | 2.69467129791154e-09 | 0.329727529697062 | 0.271207224799126 | 0.0626838389632032 |
| CER | ADediting_385430 | chr13_114287516_+ | 0.00061876472948081 | 0.276355548901015 | 1.76320410406316e-05 | 0.342709584347347 | 0.125497345507895 | 0.125650380472817 |
| TCX | ADediting_385430 | chr13_114287516_+ | 0.302887951071833 | 0.0846775564476326 | 7.55330900714445e-05 | 0.317437652246995 | 0.178919100733703 | -0.110332151144623 |
| CER | ADediting_385431 | chr13_114287519_+ | 0.000968490266212529 | 0.266738216459877 | 5.98409440566889e-05 | 0.321635582027433 | 0.18979039692794 | 0.107648131369592 |
| TCX | ADediting_385431 | chr13_114287519_+ | 0.432851705263851 | 0.0645124813836926 | 2.29036531076844e-05 | 0.3383257614617 | 0.518008569443831 | -0.0531873833138535 |
| CER | ADediting_385435 | chr13_114287548_+ | 6.87003408943655e-09 | 0.451160662643739 | 7.6694583435868e-12 | 0.521628266540403 | 0.00442784773682381 | 0.231149432621955 |
| DLPFC | ADediting_385436 | chr13_114287572_+ | 0.000325811735471265 | 0.202811690450158 | 4.91708805881311e-08 | 0.303663640715241 | 0.969814488440836 | 0.00215793700856675 |
| CER | ADediting_385437 | chr13_114287868_+ | 2.77088196314634e-07 | 0.404832511391525 | 1.59058463251673e-05 | 0.344418369260439 | 0.0418616058134065 | 0.166380275561663 |
| CER | ADediting_385438 | chr13_114287870_+ | 1.35297137436264e-06 | 0.382600278602196 | 8.32703460155161e-05 | 0.315661104954271 | 0.0599337173519768 | 0.153976685963285 |
| CER | ADediting_385439 | chr13_114287871_+ | 4.3237864246964e-05 | 0.327392203243384 | 0.000322133077601198 | 0.289776305005426 | 0.0970637662634927 | 0.13598537123931 |
| CER | ADediting_385441 | chr13_114287936_+ | 8.17822219918672e-05 | 0.315990445257228 | 3.46437413023958e-06 | 0.368603440997437 | 0.442024786720577 | -0.0632366499568946 |
| DLPFC | ADediting_385442 | chr13_114287946_+ | 0.249334671106573 | -0.0656218766327802 | 0.0154058057404969 | -0.137501181693555 | 2.51462255576301e-10 | 0.349326465182276 |
| CER | ADediting_385442 | chr13_114287946_+ | 0.000273737928927098 | 0.293022346236264 | 8.49862586603536e-07 | 0.389289541612368 | 0.70479768728084 | 0.0311865083301044 |
| CER | ADediting_385443 | chr13_114287948_+ | 0.000273407117590475 | 0.293046314206719 | 1.71980309250551e-05 | 0.343123850847931 | 0.808110968391204 | 0.0199950250557379 |
| DLPFC | ADediting_385444 | chr13_114287952_+ | 0.862940142763763 | -0.00984441024521458 | 0.0339250258414748 | -0.120510016151057 | 1.03422734809474e-13 | 0.405699975439809 |
| CER | ADediting_385444 | chr13_114287952_+ | 0.000376192759640066 | 0.286646547487978 | 8.20753580904797e-05 | 0.315925129659233 | 0.686783591084647 | -0.0331916747335665 |
| DLPFC | ADediting_385445 | chr13_114287979_+ | 0.63233263692243 | 0.0272790628946981 | 0.221669968321485 | -0.0696075712584825 | 2.22904863248441e-09 | 0.331346709073722 |
| CER | ADediting_385445 | chr13_114287979_+ | 0.000218920323239337 | 0.297416436338945 | 0.000115526659009943 | 0.309613608703645 | 0.369980827835582 | 0.0737166940416949 |
| CER | ADediting_385449 | chr13_114289270_+ | 3.76953980059844e-05 | 0.329787927024259 | 0.00059944881603608 | 0.277023321575677 | 0.123184125704209 | 0.126418662519875 |
| CER | ADediting_385450 | chr13_114289271_+ | 8.74426951735681e-06 | 0.35414902476372 | 0.000196075260006518 | 0.29955800783642 | 0.108462692698736 | 0.13158949444464 |
| CER | ADediting_385451 | chr13_114289276_+ | 7.73995336013935e-07 | 0.390617123803926 | 2.08183464867368e-08 | 0.437981842830599 | 0.0154366645238826 | 0.197453759973146 |
| CER | ADediting_385452 | chr13_114289284_+ | 6.75675157911436e-12 | 0.522800402829609 | 3.4176403873931e-10 | 0.484257561389004 | 0.00025162711696672 | 0.294686730852685 |
| CER | ADediting_385453 | chr13_114289301_+ | 0.000113772466300517 | 0.309899139541434 | 7.03406727446102e-07 | 0.391968856803044 | 0.373034637782571 | 0.0732487882023965 |
| CER | ADediting_385456 | chr13_114289363_+ | 0.000237408016398856 | 0.295830366863792 | 2.23856368721866e-05 | 0.338711802217534 | 0.0328973610067575 | 0.174308380456194 |
| CER | ADediting_385458 | chr13_114289366_+ | 0.000137692842278651 | 0.306317135166648 | 1.57200216545948e-05 | 0.344612637834553 | 0.0853040848934981 | 0.14097189948485 |
| CER | ADediting_385459 | chr13_114289368_+ | 0.000255955066961491 | 0.294350537230533 | 8.20770578230806e-07 | 0.389784730285633 | 0.0122310869132997 | 0.204114677282964 |
| CER | ADediting_385461 | chr13_114289377_+ | 0.000245365731180015 | 0.295182738614951 | 3.15545586612807e-05 | 0.332864049464308 | 0.027253233908084 | 0.180300201736584 |
| CER | ADediting_385462 | chr13_114289390_+ | 0.000372237677493367 | 0.286860918317244 | 5.44460111005707e-05 | 0.323321205045525 | 0.0744515708976219 | 0.146088633676489 |
| CER | ADediting_385463 | chr13_114289403_+ | 0.00238664455094573 | 0.246228958375977 | 3.26198792980191e-06 | 0.369519358042562 | 0.0125765274295121 | 0.203327848405047 |
| CER | ADediting_385464 | chr13_114289413_+ | 0.000891199859675915 | 0.26855027056847 | 1.34094223080475e-05 | 0.347228154414413 | 0.540828235217247 | 0.0503230712861842 |
| DLPFC | ADediting_385466 | chr13_114289463_+ | 0.299644720224401 | -0.0590959850992535 | 0.0109911887147276 | -0.144258024773037 | 6.98101769005927e-10 | 0.341056008409202 |
| DLPFC | ADediting_385470 | chr13_114289507_+ | 0.14913611467541 | -0.0821268894366657 | 0.00195637239867879 | -0.175230152618872 | 3.21434416086751e-08 | 0.307639556485978 |
| DLPFC | ADediting_385471 | chr13_114290797_+ | 6.29146069174131e-06 | 0.253338191685233 | 9.02547204634391e-09 | 0.319180534457607 | 0.000328420488500014 | 0.202696902534918 |
| CER | ADediting_385471 | chr13_114290797_+ | 0.000128008266389869 | 0.307691542506972 | 7.53679080305566e-06 | 0.3565169034789 | 0.621770826141837 | 0.0406042753838227 |
| DLPFC | ADediting_385472 | chr13_114290798_+ | 1.85340849042052e-06 | 0.266994693550631 | 1.51297673301035e-09 | 0.334625088128616 | 0.000935355089639975 | 0.187048681475607 |
| CER | ADediting_385472 | chr13_114290798_+ | 0.00048012877957671 | 0.281650707290439 | 2.81986358984076e-06 | 0.371723990194915 | 0.212211632879255 | 0.102447310934994 |
| CER | ADediting_385473 | chr13_114290814_+ | 0.000110265628955271 | 0.310482486314389 | 9.1451174589571e-07 | 0.3882445753537 | 0.16431839276754 | 0.114133018931784 |
| CER | ADediting_385477 | chr13_114290851_+ | 1.23864111630551e-05 | 0.34852507764226 | 1.84943669270991e-08 | 0.439415898731207 | 0.0582155071622322 | 0.155010918948969 |
| CER | ADediting_385478 | chr13_114290863_+ | 9.57892585879387e-05 | 0.313089989883226 | 8.59642448581471e-06 | 0.354421706161184 | 0.130970697075709 | 0.123875068749523 |
| CER | ADediting_385479 | chr13_114290873_+ | 4.42192375145039e-06 | 0.364861112159703 | 7.1023177433931e-05 | 0.3185534648524 | 0.103972232789351 | 0.133275672602068 |
| CER | ADediting_385480 | chr13_114290875_+ | 4.05142630898732e-08 | 0.429789217109035 | 6.54837869515413e-07 | 0.392976263728509 | 0.0294287470169008 | 0.177875620666958 |
| CER | ADediting_385482 | chr13_114290918_+ | 4.38724750420907e-06 | 0.364982574536422 | 4.90164909125932e-06 | 0.363267489951658 | 0.0280124295939324 | 0.17943592025741 |
| CER | ADediting_385483 | chr13_114290963_+ | 1.83483204134918e-05 | 0.342046471688754 | 0.00246321198527721 | 0.245480177699638 | 0.00663380212271072 | 0.220758688311186 |
| CER | ADediting_385485 | chr13_114290996_+ | 6.09103381773564e-07 | 0.393992284405404 | 1.60846844663631e-05 | 0.344233416272132 | 0.678522909434981 | -0.0341176712854775 |
| DLPFC | ADediting_385487 | chr13_114291009_+ | 3.75586345467337e-07 | 0.283770210661058 | 3.4073801729224e-08 | 0.307097575409678 | 0.00484797622858966 | 0.15961073510479 |
| CER | ADediting_385487 | chr13_114291009_+ | 8.75062668402403e-08 | 0.420035123247189 | 5.53925842245332e-09 | 0.453656425500806 | 0.0720159774157442 | 0.147318990611293 |
| CER | ADediting_385496 | chr13_114293126_+ | 0.00134209217551875 | 0.259506328619089 | 7.76023191201048e-06 | 0.356052864094454 | 0.00187462122814364 | 0.251882933588997 |
| CER | ADediting_385501 | chr13_114293864_+ | 0.00239692016634361 | 0.246127215758815 | 4.54569302589454e-05 | 0.326513140188903 | 0.196254966253034 | 0.106104944937847 |
| CER | ADediting_385537 | chr13_114294464_+ | 0.000132154669119607 | 0.307091616716479 | 2.34592824288002e-05 | 0.337920726613569 | 0.0235940110333513 | 0.18477961947426 |
| TCX | ADediting_385541 | chr13_114294745_+ | 0.387392575912212 | -0.0710796327089371 | 0.0605585253661343 | -0.153606631643413 | 0.000117862761064269 | 0.309239579781498 |
| CER | ADediting_385548 | chr13_114295018_+ | 1.75949323388854e-05 | 0.342744626794866 | 0.000165131986443592 | 0.302862814792718 | 0.0060306576857109 | 0.223249402233918 |
| CER | ADediting_385549 | chr13_114295033_+ | 0.000644558619724794 | 0.275493148415296 | 1.07196404067375e-05 | 0.350872369403255 | 0.000332776228017855 | 0.289123508100715 |
| CER | ADediting_385554 | chr13_114296206_+ | 0.62626872259703 | 0.0400815017118511 | 0.0333131420769635 | 0.173902487764243 | 3.80917327255952e-05 | 0.329605965021129 |
| CER | ADediting_385555 | chr13_114296308_+ | 0.0129303617432266 | 0.202541296601505 | 3.86774360597735e-05 | 0.329340292205136 | 1.07793734313814e-05 | 0.3507824622934 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.30385288586013e-11 | 0.37202604797741 | 7.15322183227646e-17 | 0.450140926605272 | 2.53334003849801e-18 | 0.468551153812295 |
| AC | 1.25641655551366e-55 | 0.794421283453578 | 1.44771517536333e-41 | 0.722080582662374 | 3.45519305673063e-16 | 0.485473281089979 |
| PCC | 3.66885130195402e-14 | 0.51211196631002 | 4.38951059331104e-16 | 0.543676024606037 | 0.000218808896691558 | 0.264411064243313 |
| CER | 3.98458268144479e-13 | 0.547876720259402 | 2.56047473698269e-14 | 0.570350632235681 | 0.0408343188272491 | 0.167211791710227 |
| TCX | 5.16004463463499e-06 | 0.362469413001499 | 0.148845375199869 | 0.118446735216447 | 1.50279556391551e-14 | 0.574523594554918 |
| FP | 1.27050630744215e-26 | 0.691250275801407 | 3.93134913098318e-10 | 0.447125605624972 | 1.47254943520441e-10 | 0.456746999820864 |
| IFG | 0.000775493794283013 | 0.62803876408624 | 0.00649604258821375 | 0.529440932414654 | 9.31489984073507e-06 | 0.762702281738452 |
| PG | 9.39484231668423e-45 | 0.811256864049751 | 9.35869802949101e-29 | 0.700422942215857 | 0.071649165311534 | 0.132391204910796 |
| STG | 2.14909405352224e-06 | 0.490722346745507 | 3.21822336044091e-05 | 0.437123281964836 | 0.000238660908895116 | 0.390678668974532 |
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Relation with AD stages for UPF3A |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_385344 | chr13_114283088_+ | 0.00116383179500526 | 0.308433784784378 |
| CER | ADediting_385350 | chr13_114283148_+ | 0.000132085276669858 | 0.359623647834471 |
| CER | ADediting_385351 | chr13_114283155_+ | 0.000119837377140248 | 0.361720388304563 |
| CER | ADediting_385358 | chr13_114283267_+ | 0.00012406051167471 | 0.360975806778179 |
| CER | ADediting_385359 | chr13_114283272_+ | 7.70017218474485e-05 | 0.371072780598339 |
| CER | ADediting_385361 | chr13_114283281_+ | 0.000320208944992585 | 0.339843523984561 |
| CER | ADediting_385362 | chr13_114283282_+ | 0.000291985142116726 | 0.341966445843418 |
| CER | ADediting_385370 | chr13_114284130_+ | 0.000169618883438855 | 0.354167250346645 |
| CER | ADediting_385382 | chr13_114284231_+ | 7.67771683587556e-05 | 0.371133590618445 |
| CER | ADediting_385418 | chr13_114287440_+ | 0.000542442385614554 | 0.327416667357074 |
| CER | ADediting_385419 | chr13_114287441_+ | 0.000718447746697757 | 0.320571586960047 |
| CER | ADediting_385420 | chr13_114287444_+ | 0.000208727145958778 | 0.349564975975327 |
| CER | ADediting_385421 | chr13_114287447_+ | 0.000207376504747177 | 0.349710051528175 |
| CER | ADediting_385435 | chr13_114287548_+ | 0.00021342352462437 | 0.349067202798332 |
| CER | ADediting_385453 | chr13_114289301_+ | 0.00145207016826688 | 0.302690936299676 |
| CER | ADediting_385456 | chr13_114289363_+ | 0.000122295869071679 | 0.361284022098914 |
| CER | ADediting_385461 | chr13_114289377_+ | 0.000967200872245397 | 0.313150665039872 |
| CER | ADediting_385471 | chr13_114290797_+ | 0.000304453155167033 | 0.341006271432632 |
| CER | ADediting_385472 | chr13_114290798_+ | 0.0007068578765032 | 0.320972126463742 |
| CER | ADediting_385508 | chr13_114293921_+ | 0.00055573967152421 | 0.326832980785191 |
| CER | ADediting_385537 | chr13_114294464_+ | 0.000179876939353536 | 0.352871829541683 |
| CER | ADediting_385548 | chr13_114295018_+ | 0.00040899888857261 | 0.334138344012239 |
| CER | ADediting_385555 | chr13_114296308_+ | 0.00035198431987624 | 0.337650919698709 |
| IFG | ADediting_385349 | chr13_114283145_+ | 0.0113059937049014 | 0.497952103823781 |
| IFG | ADediting_385383 | chr13_114284241_+ | 0.00856166723989118 | 0.514115253592447 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 2.53725252915963e-05 | 0.393363024686925 |
| TCX | 0.000277515842443044 | 0.346223242632711 |
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RelatedDrugs for UPF3A |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for UPF3A |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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