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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for PDCD6IPP2 |
 Gene summary |
| Gene information | Gene symbol | PDCD6IPP2 | Gene ID | 646278 |
| Gene name | PDCD6IP pseudogene 2 | |
| Synonyms | - | |
| Cytomap | 15q13.1 | |
| Type of gene | pseudo | |
| Description | programmed cell death 6 interacting protein pseudogene | |
| Modification date | 20200313 | |
| UniProtAcc | ||
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for PDCD6IPP2 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_465663(28839630, +), ADediting_465664(28839647, +), ADediting_465665(28839650, +), ADediting_465666(28839664, +), ADediting_465667(28839672, +), ADediting_465668(28839708, +), ADediting_465669(28841126, +), ADediting_465670(28841144, +), ADediting_465671(28841171, +), ADediting_465672(28849327, +), ADediting_465673(28849333, +), ADediting_465674(28849343, +), ADediting_465675(28849357, +), ADediting_465676(28849372, +), ADediting_465677(28851557, +), ADediting_465678(28851569, +), ADediting_465679(28851573, +), ADediting_465680(28851577, +), ADediting_465681(28851579, +), ADediting_465682(28851581, +), ADediting_465683(28851624, +), ADediting_465684(28851627, +), ADediting_465685(28851634, +), ADediting_465686(28851641, +), ADediting_465687(28851644, +), ADediting_465688(28851653, +), ADediting_465689(28851704, +), ADediting_465690(28852161, +), ADediting_465691(28852169, +), ADediting_465692(28852173, +), ADediting_465693(28852179, +), ADediting_465694(28852182, +), ADediting_465695(28852198, +), ADediting_465696(28852247, +), ADediting_465697(28852257, +), ADediting_465698(28852259, +), ADediting_465699(28852283, +), ADediting_465700(28852301, +), ADediting_465701(28852304, +), ADediting_465702(28852318, +), ADediting_465703(28852326, +), ADediting_465704(28852330, +), ADediting_465705(28852362, +), ADediting_465706(28852381, +), ADediting_465707(28852393, +), ADediting_465708(28855379, +), ADediting_465709(28855515, +), ADediting_465710(28855794, +), ADediting_465711(28855819, +), ADediting_465712(28855824, +), ADediting_465713(28856178, +), ADediting_465714(28856345, +), ADediting_465715(28856569, +), ADediting_465716(28857294, +), ADediting_465717(28857299, +), ADediting_465718(28857307, +), ADediting_465719(28857312, +), ADediting_465720(28857313, +), ADediting_465721(28857314, +), ADediting_465722(28857317, +), ADediting_465723(28857318, +), ADediting_465724(28857320, +), ADediting_465725(28857328, +), ADediting_465726(28857336, +), ADediting_465727(28857351, +), ADediting_465728(28857355, +), ADediting_465729(28857360, +), ADediting_465730(28857363, +), ADediting_465731(28857366, +), ADediting_465732(28857367, +), ADediting_465733(28857372, +), ADediting_465734(28857378, +), ADediting_465735(28857380, +), ADediting_465736(28857383, +), ADediting_465737(28857386, +), ADediting_465738(28857391, +), ADediting_465739(28857395, +), ADediting_465740(28857396, +), ADediting_465741(28857399, +), ADediting_465742(28857407, +), ADediting_465743(28857420, +), ADediting_465744(28857426, +), ADediting_465745(28857428, +), ADediting_465746(28857442, +), ADediting_465747(28857526, +), ADediting_465748(28857545, +), ADediting_465749(28858899, +), |
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RNA editing positional annotations for PDCD6IPP2 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_465663 | chr15_28839630_+ | ncRNA_intronic |
| ADediting_465664 | chr15_28839647_+ | ncRNA_intronic |
| ADediting_465665 | chr15_28839650_+ | ncRNA_intronic |
| ADediting_465666 | chr15_28839664_+ | ncRNA_intronic |
| ADediting_465667 | chr15_28839672_+ | ncRNA_intronic |
| ADediting_465668 | chr15_28839708_+ | ncRNA_intronic |
| ADediting_465669 | chr15_28841126_+ | ncRNA_intronic |
| ADediting_465670 | chr15_28841144_+ | ncRNA_intronic |
| ADediting_465671 | chr15_28841171_+ | ncRNA_intronic |
| ADediting_465672 | chr15_28849327_+ | ncRNA_intronic |
| ADediting_465673 | chr15_28849333_+ | ncRNA_intronic |
| ADediting_465674 | chr15_28849343_+ | ncRNA_intronic |
| ADediting_465675 | chr15_28849357_+ | ncRNA_intronic |
| ADediting_465676 | chr15_28849372_+ | ncRNA_intronic |
| ADediting_465677 | chr15_28851557_+ | ncRNA_exonic |
| ADediting_465678 | chr15_28851569_+ | ncRNA_intronic |
| ADediting_465679 | chr15_28851573_+ | ncRNA_intronic |
| ADediting_465680 | chr15_28851577_+ | ncRNA_intronic |
| ADediting_465681 | chr15_28851579_+ | ncRNA_intronic |
| ADediting_465682 | chr15_28851581_+ | ncRNA_intronic |
| ADediting_465683 | chr15_28851624_+ | ncRNA_intronic |
| ADediting_465684 | chr15_28851627_+ | ncRNA_intronic |
| ADediting_465685 | chr15_28851634_+ | ncRNA_intronic |
| ADediting_465686 | chr15_28851641_+ | ncRNA_intronic |
| ADediting_465687 | chr15_28851644_+ | ncRNA_intronic |
| ADediting_465688 | chr15_28851653_+ | ncRNA_intronic |
| ADediting_465689 | chr15_28851704_+ | ncRNA_intronic |
| ADediting_465690 | chr15_28852161_+ | ncRNA_intronic |
| ADediting_465691 | chr15_28852169_+ | ncRNA_intronic |
| ADediting_465692 | chr15_28852173_+ | ncRNA_intronic |
| ADediting_465693 | chr15_28852179_+ | ncRNA_intronic |
| ADediting_465694 | chr15_28852182_+ | ncRNA_intronic |
| ADediting_465695 | chr15_28852198_+ | ncRNA_intronic |
| ADediting_465696 | chr15_28852247_+ | ncRNA_intronic |
| ADediting_465697 | chr15_28852257_+ | ncRNA_intronic |
| ADediting_465698 | chr15_28852259_+ | ncRNA_intronic |
| ADediting_465699 | chr15_28852283_+ | ncRNA_intronic |
| ADediting_465700 | chr15_28852301_+ | ncRNA_intronic |
| ADediting_465701 | chr15_28852304_+ | ncRNA_intronic |
| ADediting_465702 | chr15_28852318_+ | ncRNA_intronic |
| ADediting_465703 | chr15_28852326_+ | ncRNA_intronic |
| ADediting_465704 | chr15_28852330_+ | ncRNA_intronic |
| ADediting_465705 | chr15_28852362_+ | ncRNA_intronic |
| ADediting_465706 | chr15_28852381_+ | ncRNA_intronic |
| ADediting_465707 | chr15_28852393_+ | ncRNA_intronic |
| ADediting_465708 | chr15_28855379_+ | ncRNA_intronic |
| ADediting_465709 | chr15_28855515_+ | ncRNA_intronic |
| ADediting_465710 | chr15_28855794_+ | ncRNA_intronic |
| ADediting_465711 | chr15_28855819_+ | ncRNA_intronic |
| ADediting_465712 | chr15_28855824_+ | ncRNA_intronic |
| ADediting_465713 | chr15_28856178_+ | ncRNA_exonic |
| ADediting_465714 | chr15_28856345_+ | ncRNA_exonic |
| ADediting_465715 | chr15_28856569_+ | ncRNA_exonic |
| ADediting_465716 | chr15_28857294_+ | ncRNA_exonic |
| ADediting_465717 | chr15_28857299_+ | ncRNA_exonic |
| ADediting_465718 | chr15_28857307_+ | ncRNA_exonic |
| ADediting_465719 | chr15_28857312_+ | ncRNA_exonic |
| ADediting_465720 | chr15_28857313_+ | ncRNA_exonic |
| ADediting_465721 | chr15_28857314_+ | ncRNA_exonic |
| ADediting_465722 | chr15_28857317_+ | ncRNA_exonic |
| ADediting_465723 | chr15_28857318_+ | ncRNA_exonic |
| ADediting_465724 | chr15_28857320_+ | ncRNA_exonic |
| ADediting_465725 | chr15_28857328_+ | ncRNA_exonic |
| ADediting_465726 | chr15_28857336_+ | ncRNA_exonic |
| ADediting_465727 | chr15_28857351_+ | ncRNA_exonic |
| ADediting_465728 | chr15_28857355_+ | ncRNA_exonic |
| ADediting_465729 | chr15_28857360_+ | ncRNA_exonic |
| ADediting_465730 | chr15_28857363_+ | ncRNA_exonic |
| ADediting_465731 | chr15_28857366_+ | ncRNA_exonic |
| ADediting_465732 | chr15_28857367_+ | ncRNA_exonic |
| ADediting_465733 | chr15_28857372_+ | ncRNA_exonic |
| ADediting_465734 | chr15_28857378_+ | ncRNA_exonic |
| ADediting_465735 | chr15_28857380_+ | ncRNA_exonic |
| ADediting_465736 | chr15_28857383_+ | ncRNA_exonic |
| ADediting_465737 | chr15_28857386_+ | ncRNA_exonic |
| ADediting_465738 | chr15_28857391_+ | ncRNA_exonic |
| ADediting_465739 | chr15_28857395_+ | ncRNA_exonic |
| ADediting_465740 | chr15_28857396_+ | ncRNA_exonic |
| ADediting_465741 | chr15_28857399_+ | ncRNA_exonic |
| ADediting_465742 | chr15_28857407_+ | ncRNA_exonic |
| ADediting_465743 | chr15_28857420_+ | ncRNA_exonic |
| ADediting_465744 | chr15_28857426_+ | ncRNA_exonic |
| ADediting_465745 | chr15_28857428_+ | ncRNA_exonic |
| ADediting_465746 | chr15_28857442_+ | ncRNA_exonic |
| ADediting_465747 | chr15_28857526_+ | ncRNA_exonic |
| ADediting_465748 | chr15_28857545_+ | ncRNA_exonic |
| ADediting_465749 | chr15_28858899_+ | ncRNA_exonic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_465663 | chr15_28839630_+ | SINE | Alu | Name=AluY |
| ADediting_465664 | chr15_28839647_+ | SINE | Alu | Name=AluY |
| ADediting_465665 | chr15_28839650_+ | SINE | Alu | Name=AluY |
| ADediting_465666 | chr15_28839664_+ | SINE | Alu | Name=AluY |
| ADediting_465667 | chr15_28839672_+ | SINE | Alu | Name=AluY |
| ADediting_465668 | chr15_28839708_+ | SINE | Alu | Name=AluY |
| ADediting_465669 | chr15_28841126_+ | SINE | Alu | Name=AluSx |
| ADediting_465670 | chr15_28841144_+ | SINE | Alu | Name=AluSx |
| ADediting_465671 | chr15_28841171_+ | SINE | Alu | Name=AluSx |
| ADediting_465672 | chr15_28849327_+ | Retroposon | SVA | Name=SVA_D |
| ADediting_465673 | chr15_28849333_+ | Retroposon | SVA | Name=SVA_D |
| ADediting_465674 | chr15_28849343_+ | Retroposon | SVA | Name=SVA_D |
| ADediting_465675 | chr15_28849357_+ | Retroposon | SVA | Name=SVA_D |
| ADediting_465676 | chr15_28849372_+ | Retroposon | SVA | Name=SVA_D |
| ADediting_465677 | chr15_28851557_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465678 | chr15_28851569_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465679 | chr15_28851573_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465680 | chr15_28851577_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465681 | chr15_28851579_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465682 | chr15_28851581_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465683 | chr15_28851624_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465684 | chr15_28851627_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465685 | chr15_28851634_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465686 | chr15_28851641_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465687 | chr15_28851644_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465688 | chr15_28851653_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465689 | chr15_28851704_+ | SINE | Alu | Name=AluSx3 |
| ADediting_465690 | chr15_28852161_+ | SINE | Alu | Name=AluY |
| ADediting_465691 | chr15_28852169_+ | SINE | Alu | Name=AluY |
| ADediting_465692 | chr15_28852173_+ | SINE | Alu | Name=AluY |
| ADediting_465693 | chr15_28852179_+ | SINE | Alu | Name=AluY |
| ADediting_465694 | chr15_28852182_+ | SINE | Alu | Name=AluY |
| ADediting_465695 | chr15_28852198_+ | SINE | Alu | Name=AluY |
| ADediting_465696 | chr15_28852247_+ | SINE | Alu | Name=AluY |
| ADediting_465697 | chr15_28852257_+ | SINE | Alu | Name=AluY |
| ADediting_465698 | chr15_28852259_+ | SINE | Alu | Name=AluY |
| ADediting_465699 | chr15_28852283_+ | SINE | Alu | Name=AluY |
| ADediting_465700 | chr15_28852301_+ | SINE | Alu | Name=AluY |
| ADediting_465701 | chr15_28852304_+ | SINE | Alu | Name=AluY |
| ADediting_465702 | chr15_28852318_+ | SINE | Alu | Name=AluY |
| ADediting_465703 | chr15_28852326_+ | SINE | Alu | Name=AluY |
| ADediting_465704 | chr15_28852330_+ | SINE | Alu | Name=AluY |
| ADediting_465705 | chr15_28852362_+ | SINE | Alu | Name=AluY |
| ADediting_465706 | chr15_28852381_+ | SINE | Alu | Name=AluY |
| ADediting_465707 | chr15_28852393_+ | SINE | Alu | Name=AluY |
| ADediting_465708 | chr15_28855379_+ | SINE | Alu | Name=AluJb |
| ADediting_465709 | chr15_28855515_+ | SINE | Alu | Name=AluSx1 |
| ADediting_465710 | chr15_28855794_+ | SINE | Alu | Name=AluSx1 |
| ADediting_465711 | chr15_28855819_+ | SINE | Alu | Name=AluSx1 |
| ADediting_465712 | chr15_28855824_+ | SINE | Alu | Name=AluSx1 |
| ADediting_465713 | chr15_28856178_+ | SINE | Alu | Name=AluSx |
| ADediting_465747 | chr15_28857526_+ | SINE | Alu | Name=AluSx |
| ADediting_465748 | chr15_28857545_+ | SINE | Alu | Name=AluSx |
| ADediting_465749 | chr15_28858899_+ | SINE | Alu | Name=AluSx1 |
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RNA A-to-I editing events in the alternative splicing sites for PDCD6IPP2 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| A3SS | ADediting_465683 | chr15_28851624_+ | 28851609:28851631 | 3ss | 5i | TCTATTTGTATTTTTAGTAGAGA | 2.51 | TCTATTTGTATTTTTGGTAGAGA | 3.92 |
| A3SS | ADediting_465684 | chr15_28851627_+ | 28851609:28851631 | 3ss | 2i | TCTATTTGTATTTTTAGTAGAGA | 2.51 | TCTATTTGTATTTTTAGTGGAGA | -5.44 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PDCD6IPP2 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for PDCD6IPP2 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for PDCD6IPP2 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_465714 | chr15_28856345_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3085-5p | chr15 | 28856344 | 28856350 | 7mer-m8 | 28856326 | 28856351 | 153 | -21.85 |
| ADediting_465714 | chr15_28856345_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4659a-5p | chr15 | 28856342 | 28856348 | 7mer-m8 | 28856330 | 28856349 | 146 | -12.66 |
| ADediting_465714 | chr15_28856345_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4659b-5p | chr15 | 28856342 | 28856348 | 7mer-m8 | 28856333 | 28856349 | 146 | -11.64 |
| ADediting_465715 | chr15_28856569_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4279 | chr15 | 28856567 | 28856573 | 7mer-m8 | 28856559 | 28856574 | 153 | -16.43 |
| ADediting_465717 | chr15_28857299_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-214-5p | chr15 | 28857295 | 28857301 | 7mer-m8 | 28857282 | 28857302 | 153 | -25.07 |
| ADediting_465717 | chr15_28857299_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3120-5p | chr15 | 28857293 | 28857299 | 7mer-m8 | 28857281 | 28857300 | 147 | -22.64 |
| ADediting_465717 | chr15_28857299_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4421 | chr15 | 28857294 | 28857300 | 7mer-m8 | 28857280 | 28857301 | 146 | -16.85 |
| ADediting_465717 | chr15_28857299_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-5699-3p | chr15 | 28857294 | 28857300 | 7mer-m8 | 28857275 | 28857301 | 149 | -22.18 |
| ADediting_465717 | chr15_28857299_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6720-3p | chr15 | 28857297 | 28857304 | 8mer-1a | 28857283 | 28857304 | 145 | -17.3 |
| ADediting_465718 | chr15_28857307_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-149-5p | chr15 | 28857305 | 28857312 | 8mer-1a | 28857291 | 28857312 | 158 | -21.4 |
| ADediting_465718 | chr15_28857307_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3194-3p | chr15 | 28857302 | 28857308 | 7mer-m8 | 28857289 | 28857309 | 146 | -20.06 |
| ADediting_465718 | chr15_28857307_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-760 | chr15 | 28857303 | 28857310 | 8mer-1a | 28857291 | 28857310 | 155 | -20.22 |
| ADediting_465718 | chr15_28857307_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-8057 | chr15 | 28857304 | 28857310 | 7mer-m8 | 28857291 | 28857311 | 146 | -16.58 |
| ADediting_465720 | chr15_28857313_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-216b-5p | chr15 | 28857310 | 28857317 | 8mer-1a | 28857296 | 28857317 | 145 | -13.64 |
| ADediting_465720 | chr15_28857313_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3191-5p | chr15 | 28857308 | 28857314 | 7mer-m8 | 28857295 | 28857315 | 147 | -14.86 |
| ADediting_465720 | chr15_28857313_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6764-3p | chr15 | 28857307 | 28857314 | 8mer-1a | 28857293 | 28857314 | 158 | -20.39 |
| ADediting_465720 | chr15_28857313_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6824-3p | chr15 | 28857307 | 28857314 | 8mer-1a | 28857294 | 28857314 | 153 | -20.08 |
| ADediting_465723 | chr15_28857318_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4735-5p | chr15 | 28857312 | 28857318 | 7mer-m8 | 28857298 | 28857319 | 140 | -7.27 |
| ADediting_465725 | chr15_28857328_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4713-5p | chr15 | 28857323 | 28857329 | 7mer-m8 | 28857309 | 28857330 | 145 | -14.43 |
| ADediting_465725 | chr15_28857328_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-532-3p | chr15 | 28857322 | 28857329 | 8mer-1a | 28857308 | 28857329 | 140 | -13.04 |
| ADediting_465727 | chr15_28857351_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-1269a | chr15 | 28857349 | 28857355 | 7mer-m8 | 28857335 | 28857356 | 146 | -15.33 |
| ADediting_465727 | chr15_28857351_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-1269b | chr15 | 28857349 | 28857355 | 7mer-m8 | 28857335 | 28857356 | 150 | -15.33 |
| ADediting_465729 | chr15_28857360_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4326 | chr15 | 28857358 | 28857364 | 7mer-m8 | 28857346 | 28857365 | 147 | -12.26 |
| ADediting_465729 | chr15_28857360_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4691-5p | chr15 | 28857356 | 28857363 | 8mer-1a | 28857341 | 28857363 | 152 | -19.18 |
| ADediting_465729 | chr15_28857360_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6792-3p | chr15 | 28857356 | 28857363 | 8mer-1a | 28857342 | 28857363 | 143 | -12.57 |
| ADediting_465730 | chr15_28857363_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-1236-3p | chr15 | 28857357 | 28857363 | 7mer-m8 | 28857343 | 28857364 | 140 | -11.99 |
| ADediting_465730 | chr15_28857363_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-8057 | chr15 | 28857360 | 28857367 | 8mer-1a | 28857348 | 28857367 | 144 | -16.35 |
| ADediting_465732 | chr15_28857367_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-331-3p | chr15 | 28857364 | 28857371 | 8mer-1a | 28857351 | 28857371 | 151 | -22.71 |
| ADediting_465733 | chr15_28857372_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4287 | chr15 | 28857366 | 28857372 | 7mer-m8 | 28857355 | 28857373 | 145 | -17.01 |
| ADediting_465733 | chr15_28857372_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4685-3p | chr15 | 28857366 | 28857372 | 7mer-m8 | 28857349 | 28857373 | 151 | -19.3 |
| ADediting_465735 | chr15_28857380_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4727-5p | chr15 | 28857379 | 28857386 | 8mer-1a | 28857366 | 28857386 | 145 | -15.42 |
| ADediting_465735 | chr15_28857380_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4769-3p | chr15 | 28857378 | 28857385 | 8mer-1a | 28857364 | 28857385 | 164 | -26.48 |
| ADediting_465735 | chr15_28857380_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6785-3p | chr15 | 28857374 | 28857380 | 7mer-m8 | 28857361 | 28857381 | 147 | -18.62 |
| ADediting_465735 | chr15_28857380_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6817-5p | chr15 | 28857378 | 28857385 | 8mer-1a | 28857359 | 28857385 | 146 | -20.42 |
| ADediting_465737 | chr15_28857386_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6728-3p | chr15 | 28857380 | 28857386 | 7mer-m8 | 28857366 | 28857387 | 158 | -21.28 |
| ADediting_465739 | chr15_28857395_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3909 | chr15 | 28857394 | 28857400 | 7mer-m8 | 28857379 | 28857401 | 143 | -20.47 |
| ADediting_465739 | chr15_28857395_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6845-3p | chr15 | 28857391 | 28857397 | 7mer-m8 | 28857376 | 28857398 | 143 | -18.88 |
| ADediting_465739 | chr15_28857395_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6852-3p | chr15 | 28857394 | 28857400 | 7mer-m8 | 28857385 | 28857401 | 143 | -13.97 |
| ADediting_465739 | chr15_28857395_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-7111-3p | chr15 | 28857393 | 28857399 | 7mer-m8 | 28857378 | 28857400 | 150 | -13.3 |
| ADediting_465740 | chr15_28857396_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-2114-5p | chr15 | 28857395 | 28857401 | 7mer-m8 | 28857382 | 28857402 | 161 | -23.5 |
| ADediting_465740 | chr15_28857396_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3667-3p | chr15 | 28857391 | 28857397 | 7mer-m8 | 28857377 | 28857398 | 140 | -13.47 |
| ADediting_465741 | chr15_28857399_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-129-1-3p | chr15 | 28857395 | 28857401 | 7mer-m8 | 28857381 | 28857402 | 148 | -15.41 |
| ADediting_465741 | chr15_28857399_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-129-2-3p | chr15 | 28857395 | 28857401 | 7mer-m8 | 28857381 | 28857402 | 148 | -15.41 |
| ADediting_465742 | chr15_28857407_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-1283 | chr15 | 28857401 | 28857407 | 7mer-m8 | 28857387 | 28857408 | 145 | -16.67 |
| ADediting_465742 | chr15_28857407_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-603 | chr15 | 28857406 | 28857413 | 8mer-1a | 28857392 | 28857413 | 168 | -19.26 |
| ADediting_465743 | chr15_28857420_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3922-5p | chr15 | 28857414 | 28857420 | 7mer-m8 | 28857398 | 28857421 | 152 | -17.25 |
| ADediting_465743 | chr15_28857420_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-515-5p | chr15 | 28857418 | 28857425 | 8mer-1a | 28857403 | 28857425 | 147 | -14.12 |
| ADediting_465743 | chr15_28857420_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-519e-5p | chr15 | 28857418 | 28857425 | 8mer-1a | 28857405 | 28857425 | 142 | -16.01 |
| ADediting_465743 | chr15_28857420_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-5695 | chr15 | 28857417 | 28857424 | 8mer-1a | 28857407 | 28857424 | 142 | -17.62 |
| ADediting_465744 | chr15_28857426_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-138-1-3p | chr15 | 28857423 | 28857429 | 7mer-m8 | 28857408 | 28857430 | 147 | -16.41 |
| ADediting_465744 | chr15_28857426_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3682-5p | chr15 | 28857422 | 28857428 | 7mer-m8 | 28857408 | 28857429 | 140 | -15.66 |
| ADediting_465744 | chr15_28857426_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-942-5p | chr15 | 28857420 | 28857426 | 7mer-m8 | 28857404 | 28857427 | 146 | -20.59 |
| ADediting_465746 | chr15_28857442_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-145-3p | chr15 | 28857441 | 28857447 | 7mer-m8 | 28857427 | 28857448 | 145 | -17.97 |
| ADediting_465746 | chr15_28857442_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4421 | chr15 | 28857437 | 28857444 | 8mer-1a | 28857423 | 28857444 | 140 | -12.32 |
| ADediting_465746 | chr15_28857442_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-5699-3p | chr15 | 28857437 | 28857444 | 8mer-1a | 28857420 | 28857444 | 160 | -23.34 |
| ADediting_465746 | chr15_28857442_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-7152-5p | chr15 | 28857439 | 28857445 | 7mer-m8 | 28857426 | 28857446 | 146 | -15.75 |
| ADediting_465747 | chr15_28857526_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3937 | chr15 | 28857524 | 28857530 | 7mer-m8 | 28857512 | 28857531 | 144 | -23.68 |
| ADediting_465748 | chr15_28857545_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4453 | chr15 | 28857541 | 28857547 | 7mer-m8 | 28857526 | 28857548 | 141 | -17.34 |
| ADediting_465748 | chr15_28857545_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4538 | chr15 | 28857541 | 28857547 | 7mer-m8 | 28857527 | 28857548 | 148 | -20.69 |
| ADediting_465748 | chr15_28857545_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-646 | chr15 | 28857544 | 28857550 | 7mer-m8 | 28857533 | 28857551 | 140 | -18.85 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_465715 | chr15_28856569_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6515-3p | chr15 | 28856566 | 28856573 | 8mer-1a | 28856554 | 28856573 | 141 | -14.79 |
| ADediting_465716 | chr15_28857294_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4288 | chr15 | 28857292 | 28857299 | 8mer-1a | 28857283 | 28857299 | 154 | -17.19 |
| ADediting_465716 | chr15_28857294_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-632 | chr15 | 28857292 | 28857299 | 8mer-1a | 28857280 | 28857299 | 149 | -15.39 |
| ADediting_465718 | chr15_28857307_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-152-5p | chr15 | 28857303 | 28857310 | 8mer-1a | 28857288 | 28857310 | 153 | -15.36 |
| ADediting_465719 | chr15_28857312_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4775 | chr15 | 28857312 | 28857318 | 7mer-1a | 28857297 | 28857318 | 144 | -9.42 |
| ADediting_465720 | chr15_28857313_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4775 | chr15 | 28857312 | 28857318 | 7mer-1a | 28857297 | 28857318 | 144 | -9.42 |
| ADediting_465721 | chr15_28857314_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4775 | chr15 | 28857312 | 28857318 | 7mer-1a | 28857297 | 28857318 | 144 | -9.42 |
| ADediting_465722 | chr15_28857317_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-2053 | chr15 | 28857314 | 28857320 | 7mer-m8 | 28857299 | 28857321 | 145 | -9.53 |
| ADediting_465722 | chr15_28857317_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4775 | chr15 | 28857312 | 28857318 | 7mer-1a | 28857297 | 28857318 | 144 | -9.42 |
| ADediting_465723 | chr15_28857318_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-2053 | chr15 | 28857314 | 28857320 | 7mer-m8 | 28857299 | 28857321 | 145 | -9.53 |
| ADediting_465724 | chr15_28857320_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-2053 | chr15 | 28857314 | 28857320 | 7mer-m8 | 28857299 | 28857321 | 145 | -9.53 |
| ADediting_465726 | chr15_28857336_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-568 | chr15 | 28857330 | 28857336 | 7mer-m8 | 28857318 | 28857337 | 148 | -6.74 |
| ADediting_465727 | chr15_28857351_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-1246 | chr15 | 28857350 | 28857356 | 7mer-m8 | 28857339 | 28857357 | 142 | -7.4 |
| ADediting_465728 | chr15_28857355_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-1246 | chr15 | 28857350 | 28857356 | 7mer-m8 | 28857339 | 28857357 | 142 | -7.4 |
| ADediting_465728 | chr15_28857355_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-490-5p | chr15 | 28857351 | 28857357 | 7mer-m8 | 28857339 | 28857358 | 140 | -15.5 |
| ADediting_465729 | chr15_28857360_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-22-5p | chr15 | 28857358 | 28857364 | 7mer-m8 | 28857344 | 28857365 | 153 | -14.52 |
| ADediting_465729 | chr15_28857360_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6875-3p | chr15 | 28857357 | 28857363 | 7mer-m8 | 28857341 | 28857364 | 144 | -11.07 |
| ADediting_465730 | chr15_28857363_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-22-5p | chr15 | 28857358 | 28857364 | 7mer-m8 | 28857344 | 28857365 | 153 | -14.52 |
| ADediting_465730 | chr15_28857363_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-659-3p | chr15 | 28857361 | 28857367 | 7mer-m8 | 28857343 | 28857368 | 142 | -18.05 |
| ADediting_465730 | chr15_28857363_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6875-3p | chr15 | 28857357 | 28857363 | 7mer-m8 | 28857341 | 28857364 | 144 | -11.07 |
| ADediting_465731 | chr15_28857366_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-623 | chr15 | 28857365 | 28857372 | 8mer-1a | 28857350 | 28857372 | 140 | -18.33 |
| ADediting_465731 | chr15_28857366_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-659-3p | chr15 | 28857361 | 28857367 | 7mer-m8 | 28857343 | 28857368 | 142 | -18.05 |
| ADediting_465732 | chr15_28857367_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4755-5p | chr15 | 28857366 | 28857372 | 7mer-m8 | 28857352 | 28857373 | 140 | -15.58 |
| ADediting_465732 | chr15_28857367_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-5006-3p | chr15 | 28857366 | 28857372 | 7mer-m8 | 28857350 | 28857373 | 152 | -16.32 |
| ADediting_465732 | chr15_28857367_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-623 | chr15 | 28857365 | 28857372 | 8mer-1a | 28857350 | 28857372 | 140 | -18.33 |
| ADediting_465732 | chr15_28857367_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-659-3p | chr15 | 28857361 | 28857367 | 7mer-m8 | 28857343 | 28857368 | 142 | -18.05 |
| ADediting_465733 | chr15_28857372_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3938 | chr15 | 28857367 | 28857373 | 7mer-m8 | 28857353 | 28857374 | 150 | -15.48 |
| ADediting_465733 | chr15_28857372_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-4755-5p | chr15 | 28857366 | 28857372 | 7mer-m8 | 28857352 | 28857373 | 140 | -15.58 |
| ADediting_465733 | chr15_28857372_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-5006-3p | chr15 | 28857366 | 28857372 | 7mer-m8 | 28857350 | 28857373 | 152 | -16.32 |
| ADediting_465738 | chr15_28857391_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-378a-5p | chr15 | 28857388 | 28857395 | 8mer-1a | 28857373 | 28857395 | 143 | -12.49 |
| ADediting_465738 | chr15_28857391_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6719-3p | chr15 | 28857386 | 28857392 | 7mer-m8 | 28857371 | 28857393 | 150 | -15.29 |
| ADediting_465739 | chr15_28857395_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3124-3p | chr15 | 28857391 | 28857397 | 7mer-m8 | 28857376 | 28857398 | 150 | -11.43 |
| ADediting_465740 | chr15_28857396_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3124-3p | chr15 | 28857391 | 28857397 | 7mer-m8 | 28857376 | 28857398 | 150 | -11.43 |
| ADediting_465744 | chr15_28857426_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-138-2-3p | chr15 | 28857423 | 28857429 | 7mer-m8 | 28857409 | 28857430 | 144 | -10.23 |
| ADediting_465745 | chr15_28857428_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-138-2-3p | chr15 | 28857423 | 28857429 | 7mer-m8 | 28857409 | 28857430 | 144 | -10.23 |
| ADediting_465745 | chr15_28857428_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6883-3p | chr15 | 28857426 | 28857433 | 8mer-1a | 28857412 | 28857433 | 154 | -17.37 |
| ADediting_465746 | chr15_28857442_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-578 | chr15 | 28857439 | 28857445 | 7mer-m8 | 28857428 | 28857446 | 147 | -12.17 |
| ADediting_465747 | chr15_28857526_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-12114 | chr15 | 28857523 | 28857529 | 7mer-m8 | 28857511 | 28857530 | 152 | -28.83 |
| ADediting_465747 | chr15_28857526_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3165 | chr15 | 28857522 | 28857528 | 7mer-m8 | 28857510 | 28857529 | 145 | -17.91 |
| ADediting_465747 | chr15_28857526_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-3665 | chr15 | 28857525 | 28857531 | 7mer-m8 | 28857515 | 28857532 | 140 | -17.43 |
| ADediting_465748 | chr15_28857545_+ | ENSG00000261377.5 | ENST00000566178.5 | PDCD6IPP2-206 | hsa-miR-6740-5p | chr15 | 28857540 | 28857546 | 7mer-m8 | 28857524 | 28857547 | 153 | -23.64 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for PDCD6IPP2 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000566178.5 | lncRNA |  |  |
| ENST00000564604.5 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_465713 | ENST00000566178.5 | chr15_28856178_+ | 522 | -1244.70 | -1238.50 | -1281.90 |
| ADediting_465714 | ENST00000566178.5 | chr15_28856345_+ | 689 | -1240.40 | -1238.50 | -1281.90 |
| ADediting_465715 | ENST00000566178.5 | chr15_28856569_+ | 913 | -1240.70 | -1238.50 | -1281.90 |
| ADediting_465716 | ENST00000566178.5 | chr15_28857294_+ | 1638 | -1241.70 | -1238.50 | -1281.90 |
| ADediting_465717 | ENST00000566178.5 | chr15_28857299_+ | 1643 | -1239.10 | -1238.50 | -1281.90 |
| ADediting_465718 | ENST00000566178.5 | chr15_28857307_+ | 1651 | -1238.80 | -1238.50 | -1281.90 |
| ADediting_465719 | ENST00000566178.5 | chr15_28857312_+ | 1656 | -1238.50 | -1238.50 | -1281.90 |
| ADediting_465720 | ENST00000566178.5 | chr15_28857313_+ | 1657 | -1238.50 | -1238.50 | -1281.90 |
| ADediting_465721 | ENST00000566178.5 | chr15_28857314_+ | 1658 | -1239.00 | -1238.50 | -1281.90 |
| ADediting_465722 | ENST00000566178.5 | chr15_28857317_+ | 1661 | -1240.50 | -1238.50 | -1281.90 |
| ADediting_465723 | ENST00000566178.5 | chr15_28857318_+ | 1662 | -1238.80 | -1238.50 | -1281.90 |
| ADediting_465724 | ENST00000566178.5 | chr15_28857320_+ | 1664 | -1238.50 | -1238.50 | -1281.90 |
| ADediting_465725 | ENST00000566178.5 | chr15_28857328_+ | 1672 | -1238.50 | -1238.50 | -1281.90 |
| ADediting_465726 | ENST00000566178.5 | chr15_28857336_+ | 1680 | -1238.20 | -1238.50 | -1281.90 |
| ADediting_465727 | ENST00000566178.5 | chr15_28857351_+ | 1695 | -1242.40 | -1238.50 | -1281.90 |
| ADediting_465728 | ENST00000566178.5 | chr15_28857355_+ | 1699 | -1238.50 | -1238.50 | -1281.90 |
| ADediting_465729 | ENST00000566178.5 | chr15_28857360_+ | 1704 | -1239.80 | -1238.50 | -1281.90 |
| ADediting_465730 | ENST00000566178.5 | chr15_28857363_+ | 1707 | -1239.70 | -1238.50 | -1281.90 |
| ADediting_465731 | ENST00000566178.5 | chr15_28857366_+ | 1710 | -1238.30 | -1238.50 | -1281.90 |
| ADediting_465732 | ENST00000566178.5 | chr15_28857367_+ | 1711 | -1238.60 | -1238.50 | -1281.90 |
| ADediting_465733 | ENST00000566178.5 | chr15_28857372_+ | 1716 | -1240.10 | -1238.50 | -1281.90 |
| ADediting_465734 | ENST00000566178.5 | chr15_28857378_+ | 1722 | -1240.90 | -1238.50 | -1281.90 |
| ADediting_465735 | ENST00000566178.5 | chr15_28857380_+ | 1724 | -1240.30 | -1238.50 | -1281.90 |
| ADediting_465736 | ENST00000566178.5 | chr15_28857383_+ | 1727 | -1240.50 | -1238.50 | -1281.90 |
| ADediting_465737 | ENST00000566178.5 | chr15_28857386_+ | 1730 | -1240.00 | -1238.50 | -1281.90 |
| ADediting_465738 | ENST00000566178.5 | chr15_28857391_+ | 1735 | -1239.30 | -1238.50 | -1281.90 |
| ADediting_465739 | ENST00000566178.5 | chr15_28857395_+ | 1739 | -1239.80 | -1238.50 | -1281.90 |
| ADediting_465740 | ENST00000566178.5 | chr15_28857396_+ | 1740 | -1240.10 | -1238.50 | -1281.90 |
| ADediting_465741 | ENST00000566178.5 | chr15_28857399_+ | 1743 | -1240.70 | -1238.50 | -1281.90 |
| ADediting_465742 | ENST00000566178.5 | chr15_28857407_+ | 1751 | -1239.50 | -1238.50 | -1281.90 |
| ADediting_465743 | ENST00000566178.5 | chr15_28857420_+ | 1764 | -1238.50 | -1238.50 | -1281.90 |
| ADediting_465744 | ENST00000566178.5 | chr15_28857426_+ | 1770 | -1238.50 | -1238.50 | -1281.90 |
| ADediting_465745 | ENST00000566178.5 | chr15_28857428_+ | 1772 | -1240.40 | -1238.50 | -1281.90 |
| ADediting_465746 | ENST00000566178.5 | chr15_28857442_+ | 1786 | -1238.20 | -1238.50 | -1281.90 |
| ADediting_465747 | ENST00000566178.5 | chr15_28857526_+ | 1870 | -1238.10 | -1238.50 | -1281.90 |
| ADediting_465748 | ENST00000566178.5 | chr15_28857545_+ | 1889 | -1238.50 | -1238.50 | -1281.90 |
| ADediting_465749 | ENST00000566178.5 | chr15_28858899_+ | 3243 | -1237.50 | -1238.50 | -1281.90 |
| ADediting_465677 | ENST00000564604.5 | chr15_28851557_+ | 559 | -186.30 | -186.40 | -186.30 |
Top |
Relation with ADAR for PDCD6IPP2 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_465671 | chr15_28841171_+ | 0.363180787941108 | 0.0518205878770178 | 0.166036607688516 | -0.0788616779662612 | 2.51417829853371e-18 | 0.468591756714236 |
| DLPFC | ADediting_465678 | chr15_28851569_+ | 5.0384472298584e-06 | 0.255877568317652 | 7.09387749679725e-08 | 0.30018722390811 | 0.0287936190849061 | 0.124194124508011 |
| DLPFC | ADediting_465679 | chr15_28851573_+ | 1.59314365300248e-07 | 0.292346950951889 | 2.07846754138787e-11 | 0.368565770716475 | 0.0863377934708181 | 0.0975693793481621 |
| TCX | ADediting_465679 | chr15_28851573_+ | 0.000790523585308297 | 0.271140247344714 | 6.77967519817525e-05 | 0.319393201004428 | 0.454791866109598 | -0.0614856333311758 |
| DLPFC | ADediting_465680 | chr15_28851577_+ | 3.66128451256868e-07 | 0.284029430535352 | 1.13385495046553e-09 | 0.337040737579075 | 0.0572961556876293 | 0.108092199581359 |
| TCX | ADediting_465680 | chr15_28851577_+ | 0.000179394494142793 | 0.301273716821464 | 7.55678159087233e-06 | 0.356474860223099 | 0.231221072040185 | -0.0983380672938174 |
| TCX | ADediting_465681 | chr15_28851579_+ | 0.00368495592402327 | 0.235727150114191 | 7.39608929892202e-05 | 0.317819378263317 | 0.305215102275192 | -0.0842724814713726 |
| DLPFC | ADediting_465682 | chr15_28851581_+ | 7.32617488954181e-07 | 0.2768839063745 | 5.68809668192813e-08 | 0.302287510106436 | 0.0196419246250044 | 0.13246290704434 |
| TCX | ADediting_465682 | chr15_28851581_+ | 0.000236748171266035 | 0.295884968833659 | 4.18497148719347e-05 | 0.327963903491066 | 0.399382372878182 | -0.069305176542323 |
| DLPFC | ADediting_465683 | chr15_28851624_+ | 4.74789731077513e-08 | 0.30399338540353 | 6.34794445355847e-11 | 0.36010860521363 | 0.268971875647403 | 0.062976462816156 |
| CER | ADediting_465683 | chr15_28851624_+ | 0.000261141098989629 | 0.29395456870875 | 0.000150024048402342 | 0.304692058457047 | 0.278643041428649 | 0.0890259794896844 |
| TCX | ADediting_465683 | chr15_28851624_+ | 0.0025893840927052 | 0.244291090278678 | 7.18187750237998e-05 | 0.318351891429972 | 0.354694727304914 | -0.076095444573404 |
| DLPFC | ADediting_465684 | chr15_28851627_+ | 1.38422943413856e-10 | 0.354052409242243 | 4.67987217976049e-14 | 0.410873604115895 | 0.29119822289785 | 0.0601368503961786 |
| TCX | ADediting_465684 | chr15_28851627_+ | 0.00146273821227336 | 0.25756412109999 | 2.9533879441899e-06 | 0.371025456031188 | 0.333478292156292 | -0.0795059734284527 |
| DLPFC | ADediting_465685 | chr15_28851634_+ | 1.97942838182919e-09 | 0.332355641760603 | 1.72971002915204e-11 | 0.369933689733868 | 0.558272741747751 | 0.0333745577456991 |
| CER | ADediting_465685 | chr15_28851634_+ | 0.00186317907196546 | 0.252024659467869 | 6.00508236628593e-05 | 0.321572926261336 | 0.162450637414765 | 0.114637130233926 |
| TCX | ADediting_465685 | chr15_28851634_+ | 0.000315184662333524 | 0.29021335346596 | 7.24668091933109e-05 | 0.318189243855341 | 0.139741015565849 | -0.121145514796156 |
| DLPFC | ADediting_465686 | chr15_28851641_+ | 5.69193047765245e-10 | 0.342729038070286 | 1.1277911267146e-13 | 0.405129463952322 | 0.570367634805662 | 0.0323546752991247 |
| CER | ADediting_465686 | chr15_28851641_+ | 0.00144821351957133 | 0.257790034013544 | 2.67778999793421e-05 | 0.335674756692315 | 0.306225772535686 | 0.0840971913014795 |
| TCX | ADediting_465686 | chr15_28851641_+ | 0.0152637542441248 | 0.197780655367563 | 3.24333643303406e-06 | 0.369606462970407 | 0.103645696948384 | -0.133400503541715 |
| DLPFC | ADediting_465687 | chr15_28851644_+ | 7.08252531720965e-11 | 0.359265657133363 | 1.6354784770555e-15 | 0.431821459734912 | 0.0498561738536228 | 0.111491335174039 |
| CER | ADediting_465687 | chr15_28851644_+ | 0.00256043125537592 | 0.244559238209534 | 0.0001439590914674 | 0.305475109794051 | 0.651541836386335 | 0.0371729424433056 |
| TCX | ADediting_465687 | chr15_28851644_+ | 0.00517550547996673 | 0.227191938531649 | 2.83939853383536e-07 | 0.404502047554084 | 0.142424839101981 | -0.120336414491898 |
| DLPFC | ADediting_465688 | chr15_28851653_+ | 8.793154167653e-10 | 0.339152636440696 | 5.26497856490549e-14 | 0.410110622806428 | 0.0277849875676569 | 0.124983642954188 |
| CER | ADediting_465688 | chr15_28851653_+ | 0.000156801880671313 | 0.303851131987128 | 3.67002521495336e-05 | 0.330252856672202 | 0.283171229551012 | 0.088195172931347 |
| TCX | ADediting_465688 | chr15_28851653_+ | 0.00164196776836527 | 0.254932971042885 | 6.9895188987924e-09 | 0.450959923082343 | 0.0677950254856276 | -0.149533569553417 |
| DLPFC | ADediting_465689 | chr15_28851704_+ | 1.86556120103217e-07 | 0.290789486074162 | 1.61667795575822e-08 | 0.313945209538568 | 0.016466523017976 | 0.136135605149054 |
| DLPFC | ADediting_465691 | chr15_28852169_+ | 1.90855720847073e-05 | 0.240227696241634 | 7.49232479877933e-10 | 0.34047440096726 | 0.0565681677168284 | 0.108408056527041 |
| DLPFC | ADediting_465693 | chr15_28852179_+ | 6.5070980359273e-05 | 0.22482046409495 | 9.60844769441999e-10 | 0.338417879606769 | 0.0240531151326491 | 0.128137019622369 |
| DLPFC | ADediting_465696 | chr15_28852247_+ | 1.38368209105743e-08 | 0.315352856654402 | 6.76998120810436e-13 | 0.393071205241853 | 0.029540715208028 | 0.123624464939522 |
| TCX | ADediting_465696 | chr15_28852247_+ | 0.000519880582939462 | 0.280001508598625 | 4.86979668562425e-05 | 0.325299038493914 | 0.426820394334924 | -0.0653597907019656 |
| DLPFC | ADediting_465697 | chr15_28852257_+ | 2.29568417120519e-07 | 0.288728172738499 | 2.16799535466763e-09 | 0.331582962443699 | 0.00719384787587611 | 0.152376236951958 |
| DLPFC | ADediting_465700 | chr15_28852301_+ | 4.29424754772839e-06 | 0.257688546900788 | 1.96041232338074e-08 | 0.312191255203337 | 0.00210248010107402 | 0.174036958235455 |
| DLPFC | ADediting_465701 | chr15_28852304_+ | 6.17485105266443e-06 | 0.25355313558 | 2.05381559060324e-08 | 0.311766072025128 | 0.00629635230030431 | 0.154852041847424 |
| DLPFC | ADediting_465703 | chr15_28852326_+ | 1.47823342787597e-07 | 0.293082333698373 | 1.45674017570705e-09 | 0.334943488681063 | 0.00587510107442488 | 0.156125035177134 |
| TCX | ADediting_465704 | chr15_28852330_+ | 0.0655946319562309 | 0.15073286699716 | 2.76499009751328e-05 | 0.335128163076424 | 0.17362696140567 | -0.111682315878302 |
| DLPFC | ADediting_465706 | chr15_28852381_+ | 8.90363008544351e-05 | 0.220706836192046 | 4.56955862791259e-09 | 0.325169022954835 | 0.257236892008811 | 0.0645406338693615 |
| TCX | ADediting_465706 | chr15_28852381_+ | 0.14557749917473 | 0.119400638024729 | 2.37763024486617e-05 | 0.337693659770181 | 1.53002575207449e-05 | -0.345059575460385 |
| CER | ADediting_465731 | chr15_28857366_+ | 6.148762640983e-06 | 0.359729841727257 | 1.21289338228925e-07 | 0.415804894188849 | 0.0187281756335171 | 0.191769170768333 |
| TCX | ADediting_465731 | chr15_28857366_+ | 0.00400623640374283 | 0.23365410021707 | 6.2836924186027e-07 | 0.393555697509735 | 0.200807172498387 | -0.105040261895799 |
| CER | ADediting_465733 | chr15_28857372_+ | 2.0837854004717e-06 | 0.376251758961179 | 6.21954341517488e-07 | 0.393699631334874 | 0.138798007928735 | 0.121432615022854 |
| CER | ADediting_465735 | chr15_28857380_+ | 1.55787744693641e-07 | 0.412521584876126 | 1.58337945420787e-08 | 0.441287617963691 | 0.0292646390239293 | 0.178053091832927 |
| TCX | ADediting_465735 | chr15_28857380_+ | 0.0384141987155395 | 0.169242392562587 | 7.0368736256114e-06 | 0.357604153813222 | 0.0871441677842 | -0.14015686412266 |
| CER | ADediting_465736 | chr15_28857383_+ | 0.0007148396766611 | 0.273295179952457 | 0.000111705692727663 | 0.310240871052632 | 0.00735588402067303 | 0.218029238021832 |
| CER | ADediting_465737 | chr15_28857386_+ | 0.000120064683944106 | 0.308893315527036 | 1.29096655712092e-05 | 0.347849589233789 | 0.0610451460934631 | 0.153320584865758 |
| CER | ADediting_465740 | chr15_28857396_+ | 0.000254855382982742 | 0.294435457353706 | 8.54082433055056e-06 | 0.354525402760616 | 0.415860129955561 | 0.0669174462383351 |
| CER | ADediting_465745 | chr15_28857428_+ | 0.00360131424980595 | 0.236293492010166 | 5.07569511682781e-05 | 0.324566538853497 | 0.525231857075446 | 0.0522739559567289 |
| TCX | ADediting_465745 | chr15_28857428_+ | 0.631765079340853 | 0.0394448457540704 | 7.48634647010528e-05 | 0.317599317943444 | 0.120867594681166 | -0.127199302370963 |
| CER | ADediting_465746 | chr15_28857442_+ | 0.0012064848899132 | 0.261889678682905 | 0.00010991665468304 | 0.310541480941892 | 0.838416849873088 | 0.0167891869908941 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 9.77419259657579e-07 | 0.273853808240626 | 6.4043980989552e-07 | 0.278284907788739 | 7.47162179291598e-22 | 0.509193558939472 |
| AC | 1.56368071667436e-33 | 0.666899717777125 | 2.35649017926784e-30 | 0.641236391661187 | 6.43823063290992e-10 | 0.37810422241364 |
| PCC | 4.33889360987373e-19 | 0.58719787700056 | 4.61385474465838e-18 | 0.573037875164601 | 0.0153112887514194 | 0.175252146726267 |
| CER | 4.87047832794819e-20 | 0.658978559684609 | 3.82167674600849e-15 | 0.584982571620043 | 0.00273523064869594 | 0.242980241845688 |
| TCX | 7.68377285228623e-20 | 0.656343121035392 | 3.54830149621113e-11 | 0.507091659403968 | 0.524500112866973 | 0.0523661973463348 |
| FP | 1.74724722396633e-30 | 0.726463823929106 | 4.30797804707163e-27 | 0.695821448761098 | 0.00902265230531517 | 0.19520607484337 |
| PG | 1.60994463355917e-35 | 0.754710290506266 | 5.91580333741856e-23 | 0.641518424906553 | 0.627828305773291 | 0.0357760126186083 |
| STG | 1.86913217779772e-13 | 0.69658271811841 | 3.4997319530881e-11 | 0.645132453075327 | 0.147606764295091 | 0.159369999545403 |
Top |
Relation with AD stages for PDCD6IPP2 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_465722 | chr15_28857317_+ | 0.000245370329358659 | 0.345927734795912 |
| CER | ADediting_465735 | chr15_28857380_+ | 0.00130497310977128 | 0.305477326011566 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for PDCD6IPP2 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PDCD6IPP2 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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