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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for PDF

check button Gene summary
Gene informationGene symbol

PDF

Gene ID

64146

Gene namepeptide deformylase, mitochondrial
Synonyms-
Cytomap

16q22.1

Type of geneprotein-coding
Descriptionpeptide deformylase, mitochondrialpeptide deformylase-like proteinpolypeptide deformylase
Modification date20200313
UniProtAcc

Q9HBH1,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
PDF

GO:0018206

peptidyl-methionine modification

15489958

PDF

GO:0031365

N-terminal protein amino acid modification

15489958


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RNA A-to-I events for PDF

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_560938(69327161, -), ADediting_560939(69327197, -), ADediting_560940(69327203, -), ADediting_560941(69327233, -), ADediting_560942(69327235, -), ADediting_560943(69327244, -), ADediting_560944(69327253, -), ADediting_560945(69327257, -), ADediting_560946(69327264, -), ADediting_560947(69327265, -), ADediting_560948(69327266, -), ADediting_560949(69327273, -), ADediting_560950(69327296, -), ADediting_560951(69327300, -), ADediting_560952(69327302, -), ADediting_560953(69327305, -), ADediting_560954(69327306, -), ADediting_560955(69327316, -), ADediting_560956(69327332, -), ADediting_560957(69327335, -), ADediting_560958(69327336, -), ADediting_560959(69327341, -), ADediting_560960(69327343, -), ADediting_560961(69327344, -), ADediting_560962(69327345, -), ADediting_560963(69327346, -), ADediting_560964(69327347, -), ADediting_560965(69327350, -), ADediting_560966(69327361, -), ADediting_560967(69327369, -), ADediting_560968(69327371, -), ADediting_560969(69327372, -), ADediting_560970(69327386, -), ADediting_560971(69327387, -), ADediting_560972(69327392, -), ADediting_560973(69327395, -), ADediting_560974(69327400, -), ADediting_560975(69327405, -), ADediting_560976(69327410, -), ADediting_560977(69327414, -), ADediting_560978(69327418, -), ADediting_560979(69327419, -), ADediting_560980(69327435, -), ADediting_560981(69327440, -), ADediting_560982(69327441, -), ADediting_560983(69327463, -), ADediting_560984(69327755, -), ADediting_560985(69327767, -), ADediting_560986(69327768, -), ADediting_560987(69327790, -), ADediting_560988(69327791, -), ADediting_560989(69327795, -), ADediting_560990(69327809, -), ADediting_560991(69327820, -), ADediting_560992(69327832, -), ADediting_560993(69327843, -), ADediting_560994(69327845, -), ADediting_560995(69327847, -), ADediting_560996(69327852, -), ADediting_560997(69328011, -), ADediting_560998(69328021, -), ADediting_560999(69328025, -), ADediting_561000(69328027, -), ADediting_561001(69328041, -), ADediting_561002(69328051, -), ADediting_561003(69328054, -), ADediting_561004(69328059, -), ADediting_561005(69328063, -), ADediting_561006(69328064, -), ADediting_561007(69328068, -), ADediting_561008(69328069, -), ADediting_561009(69328076, -), ADediting_561010(69328085, -), ADediting_561011(69328092, -), ADediting_561012(69328095, -), ADediting_561013(69328112, -), ADediting_561014(69328116, -), ADediting_561015(69328118, -), ADediting_561016(69328121, -), ADediting_561017(69328125, -), ADediting_561018(69328130, -), ADediting_561019(69328141, -), ADediting_561020(69328142, -), ADediting_561021(69328151, -), ADediting_561022(69328166, -), ADediting_561023(69328167, -), ADediting_561024(69328175, -), ADediting_561025(69328183, -), ADediting_561026(69328213, -), ADediting_561027(69328218, -), ADediting_561028(69328219, -), ADediting_561029(69328227, -), ADediting_561030(69328235, -), ADediting_561031(69328241, -), ADediting_1543865(69327362, -),

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RNA editing positional annotations for PDF using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_560938chr16_69327161_-UTR3
ADediting_560939chr16_69327197_-UTR3
ADediting_560940chr16_69327203_-UTR3
ADediting_560941chr16_69327233_-UTR3
ADediting_560942chr16_69327235_-UTR3
ADediting_560943chr16_69327244_-UTR3
ADediting_560944chr16_69327253_-UTR3
ADediting_560945chr16_69327257_-UTR3
ADediting_560946chr16_69327264_-UTR3
ADediting_560947chr16_69327265_-UTR3
ADediting_560948chr16_69327266_-UTR3
ADediting_560949chr16_69327273_-UTR3
ADediting_560950chr16_69327296_-UTR3
ADediting_560951chr16_69327300_-UTR3
ADediting_560952chr16_69327302_-UTR3
ADediting_560953chr16_69327305_-UTR3
ADediting_560954chr16_69327306_-UTR3
ADediting_560955chr16_69327316_-UTR3
ADediting_560956chr16_69327332_-UTR3
ADediting_560957chr16_69327335_-UTR3
ADediting_560958chr16_69327336_-UTR3
ADediting_560959chr16_69327341_-UTR3
ADediting_560960chr16_69327343_-UTR3
ADediting_560961chr16_69327344_-UTR3
ADediting_560962chr16_69327345_-UTR3
ADediting_560963chr16_69327346_-UTR3
ADediting_560964chr16_69327347_-UTR3
ADediting_560965chr16_69327350_-UTR3
ADediting_560966chr16_69327361_-UTR3
ADediting_560967chr16_69327369_-UTR3
ADediting_560968chr16_69327371_-UTR3
ADediting_560969chr16_69327372_-UTR3
ADediting_560970chr16_69327386_-UTR3
ADediting_560971chr16_69327387_-UTR3
ADediting_560972chr16_69327392_-UTR3
ADediting_560973chr16_69327395_-UTR3
ADediting_560974chr16_69327400_-UTR3
ADediting_560975chr16_69327405_-UTR3
ADediting_560976chr16_69327410_-UTR3
ADediting_560977chr16_69327414_-UTR3
ADediting_560978chr16_69327418_-UTR3
ADediting_560979chr16_69327419_-UTR3
ADediting_560980chr16_69327435_-UTR3
ADediting_560981chr16_69327440_-UTR3
ADediting_560982chr16_69327441_-UTR3
ADediting_560983chr16_69327463_-UTR3
ADediting_560984chr16_69327755_-UTR3
ADediting_560985chr16_69327767_-UTR3
ADediting_560986chr16_69327768_-UTR3
ADediting_560987chr16_69327790_-UTR3
ADediting_560988chr16_69327791_-UTR3
ADediting_560989chr16_69327795_-UTR3
ADediting_560990chr16_69327809_-UTR3
ADediting_560991chr16_69327820_-UTR3
ADediting_560992chr16_69327832_-UTR3
ADediting_560993chr16_69327843_-UTR3
ADediting_560994chr16_69327845_-UTR3
ADediting_560995chr16_69327847_-UTR3
ADediting_560996chr16_69327852_-UTR3
ADediting_560997chr16_69328011_-UTR3
ADediting_560998chr16_69328021_-UTR3
ADediting_560999chr16_69328025_-UTR3
ADediting_561000chr16_69328027_-UTR3
ADediting_561001chr16_69328041_-UTR3
ADediting_561002chr16_69328051_-UTR3
ADediting_561003chr16_69328054_-UTR3
ADediting_561004chr16_69328059_-UTR3
ADediting_561005chr16_69328063_-UTR3
ADediting_561006chr16_69328064_-UTR3
ADediting_561007chr16_69328068_-UTR3
ADediting_561008chr16_69328069_-UTR3
ADediting_561009chr16_69328076_-UTR3
ADediting_561010chr16_69328085_-UTR3
ADediting_561011chr16_69328092_-UTR3
ADediting_561012chr16_69328095_-UTR3
ADediting_561013chr16_69328112_-UTR3
ADediting_561014chr16_69328116_-UTR3
ADediting_561015chr16_69328118_-UTR3
ADediting_561016chr16_69328121_-UTR3
ADediting_561017chr16_69328125_-UTR3
ADediting_561018chr16_69328130_-UTR3
ADediting_561019chr16_69328141_-UTR3
ADediting_561020chr16_69328142_-UTR3
ADediting_561021chr16_69328151_-UTR3
ADediting_561022chr16_69328166_-UTR3
ADediting_561023chr16_69328167_-UTR3
ADediting_561024chr16_69328175_-UTR3
ADediting_561025chr16_69328183_-UTR3
ADediting_561026chr16_69328213_-UTR3
ADediting_561027chr16_69328218_-UTR3
ADediting_561028chr16_69328219_-UTR3
ADediting_561029chr16_69328227_-UTR3
ADediting_561030chr16_69328235_-UTR3
ADediting_561031chr16_69328241_-UTR3
ADediting_1543865chr16_69327362_-UTR3

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_560938chr16_69327161_-SINEAluName=AluSx1
ADediting_560939chr16_69327197_-SINEAluName=AluSx1
ADediting_560940chr16_69327203_-SINEAluName=AluSx1
ADediting_560941chr16_69327233_-SINEAluName=AluSx1
ADediting_560942chr16_69327235_-SINEAluName=AluSx1
ADediting_560943chr16_69327244_-SINEAluName=AluSx1
ADediting_560944chr16_69327253_-SINEAluName=AluSx1
ADediting_560945chr16_69327257_-SINEAluName=AluSx1
ADediting_560946chr16_69327264_-SINEAluName=AluSx1
ADediting_560947chr16_69327265_-SINEAluName=AluSx1
ADediting_560948chr16_69327266_-SINEAluName=AluSx1
ADediting_560949chr16_69327273_-SINEAluName=AluSx1
ADediting_560950chr16_69327296_-SINEAluName=AluSx1
ADediting_560951chr16_69327300_-SINEAluName=AluSx1
ADediting_560952chr16_69327302_-SINEAluName=AluSx1
ADediting_560953chr16_69327305_-SINEAluName=AluSx1
ADediting_560954chr16_69327306_-SINEAluName=AluSx1
ADediting_560955chr16_69327316_-SINEAluName=AluSx1
ADediting_560956chr16_69327332_-SINEAluName=AluSx1
ADediting_560957chr16_69327335_-SINEAluName=AluSx1
ADediting_560958chr16_69327336_-SINEAluName=AluSx1
ADediting_560959chr16_69327341_-SINEAluName=AluSx1
ADediting_560960chr16_69327343_-SINEAluName=AluSx1
ADediting_560961chr16_69327344_-SINEAluName=AluSx1
ADediting_560962chr16_69327345_-SINEAluName=AluSx1
ADediting_560963chr16_69327346_-SINEAluName=AluSx1
ADediting_560964chr16_69327347_-SINEAluName=AluSx1
ADediting_560965chr16_69327350_-SINEAluName=AluSx1
ADediting_560966chr16_69327361_-SINEAluName=AluSx1
ADediting_560967chr16_69327369_-SINEAluName=AluSx1
ADediting_560968chr16_69327371_-SINEAluName=AluSx1
ADediting_560969chr16_69327372_-SINEAluName=AluSx1
ADediting_560970chr16_69327386_-SINEAluName=AluSx1
ADediting_560971chr16_69327387_-SINEAluName=AluSx1
ADediting_560972chr16_69327392_-SINEAluName=AluSx1
ADediting_560973chr16_69327395_-SINEAluName=AluSx1
ADediting_560974chr16_69327400_-SINEAluName=AluSx1
ADediting_560975chr16_69327405_-SINEAluName=AluSx1
ADediting_560976chr16_69327410_-SINEAluName=AluSx1
ADediting_560977chr16_69327414_-SINEAluName=AluSx1
ADediting_560978chr16_69327418_-SINEAluName=AluSx1
ADediting_560979chr16_69327419_-SINEAluName=AluSx1
ADediting_560980chr16_69327435_-SINEAluName=AluSx1
ADediting_560981chr16_69327440_-SINEAluName=AluSx1
ADediting_560982chr16_69327441_-SINEAluName=AluSx1
ADediting_560983chr16_69327463_-SINEAluName=AluSx1
ADediting_560984chr16_69327755_-SINEAluName=FLAM_C
ADediting_560985chr16_69327767_-SINEAluName=FLAM_C
ADediting_560986chr16_69327768_-SINEAluName=FLAM_C
ADediting_560987chr16_69327790_-SINEAluName=FLAM_C
ADediting_560988chr16_69327791_-SINEAluName=FLAM_C
ADediting_560989chr16_69327795_-SINEAluName=FLAM_C
ADediting_560990chr16_69327809_-SINEAluName=FLAM_C
ADediting_560991chr16_69327820_-SINEAluName=FLAM_C
ADediting_560992chr16_69327832_-SINEAluName=FLAM_C
ADediting_560993chr16_69327843_-SINEAluName=FLAM_C
ADediting_560994chr16_69327845_-SINEAluName=FLAM_C
ADediting_560995chr16_69327847_-SINEAluName=FLAM_C
ADediting_560996chr16_69327852_-SINEAluName=FLAM_C
ADediting_560997chr16_69328011_-SINEAluName=AluSg7
ADediting_560998chr16_69328021_-SINEAluName=AluSg7
ADediting_560999chr16_69328025_-SINEAluName=AluSg7
ADediting_561000chr16_69328027_-SINEAluName=AluSg7
ADediting_561001chr16_69328041_-SINEAluName=AluSg7
ADediting_561002chr16_69328051_-SINEAluName=AluSg7
ADediting_561003chr16_69328054_-SINEAluName=AluSg7
ADediting_561004chr16_69328059_-SINEAluName=AluSg7
ADediting_561005chr16_69328063_-SINEAluName=AluSg7
ADediting_561006chr16_69328064_-SINEAluName=AluSg7
ADediting_561007chr16_69328068_-SINEAluName=AluSg7
ADediting_561008chr16_69328069_-SINEAluName=AluSg7
ADediting_561009chr16_69328076_-SINEAluName=AluSg7
ADediting_561010chr16_69328085_-SINEAluName=AluSg7
ADediting_561011chr16_69328092_-SINEAluName=AluSg7
ADediting_561012chr16_69328095_-SINEAluName=AluSg7
ADediting_561013chr16_69328112_-SINEAluName=AluSg7
ADediting_561014chr16_69328116_-SINEAluName=AluSg7
ADediting_561015chr16_69328118_-SINEAluName=AluSg7
ADediting_561016chr16_69328121_-SINEAluName=AluSg7
ADediting_561017chr16_69328125_-SINEAluName=AluSg7
ADediting_561018chr16_69328130_-SINEAluName=AluSg7
ADediting_561019chr16_69328141_-SINEAluName=AluSg7
ADediting_561020chr16_69328142_-SINEAluName=AluSg7
ADediting_561021chr16_69328151_-SINEAluName=AluSg7
ADediting_561022chr16_69328166_-SINEAluName=AluSg7
ADediting_561023chr16_69328167_-SINEAluName=AluSg7
ADediting_561024chr16_69328175_-SINEAluName=AluSg7
ADediting_561025chr16_69328183_-SINEAluName=AluSg7
ADediting_561026chr16_69328213_-SINEAluName=AluSg7
ADediting_561027chr16_69328218_-SINEAluName=AluSg7
ADediting_561028chr16_69328219_-SINEAluName=AluSg7
ADediting_561029chr16_69328227_-SINEAluName=AluSg7
ADediting_561030chr16_69328235_-SINEAluName=AluSg7
ADediting_561031chr16_69328241_-SINEAluName=AluSg7
ADediting_1543865chr16_69327362_-SINEAluName=AluSx1

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RNA A-to-I editing events in the alternative splicing sites for PDF

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PDF

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
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check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for PDF

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for PDF

check buttonRNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
all structure

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_560938chr16_69327161_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6832-3pchr1669327159693271657mer-m86932715869327177159-9.85
ADediting_560939chr16_69327197_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1233-3pchr1669327192693271987mer-m86932719169327210158-23.39
ADediting_560939chr16_69327197_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3663-5pchr1669327197693272037mer-m86932719669327218148-25.09
ADediting_560939chr16_69327197_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6779-3pchr1669327193693271997mer-m86932719269327214156-21.51
ADediting_560940chr16_69327203_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1181chr1669327203693272097mer-m86932720269327222142-22.01
ADediting_560941chr16_69327233_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-769-5pchr1669327229693272357mer-m86932722869327249154-23.47
ADediting_560942chr16_69327235_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-7977chr1669327233693272397mer-m86932723269327250158-23.76
ADediting_560944chr16_69327253_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1281chr1669327253693272597mer-m86932725269327268141-17.01
ADediting_560945chr16_69327257_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1913chr1669327251693272588mer-1a6932725169327272148-21.45
ADediting_560945chr16_69327257_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-361-3pchr1669327256693272627mer-m86932725569327281165-32.41
ADediting_560947chr16_69327265_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4303chr1669327264693272707mer-m86932726369327278141-11.55
ADediting_560949chr16_69327273_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4431chr1669327270693272767mer-m86932726969327290140-17.94
ADediting_560950chr16_69327296_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-646chr1669327294693273007mer-m86932729369327311145-16.35
ADediting_560954chr16_69327306_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-513a-5pchr1669327305693273117mer-m86932730469327321140-14.37
ADediting_560955chr16_69327316_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1226-3pchr1669327316693273227mer-m86932731569327336142-19.71
ADediting_560959chr16_69327341_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-153-5pchr1669327341693273477mer-m86932734069327360146-11.96
ADediting_560959chr16_69327341_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-23a-3pchr1669327337693273448mer-1a6932733769327358143-10.08
ADediting_560959chr16_69327341_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-23b-3pchr1669327337693273448mer-1a6932733769327360143-10.08
ADediting_560959chr16_69327341_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-23cchr1669327337693273448mer-1a6932733769327358148-11.26
ADediting_560960chr16_69327343_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1-5pchr1669327338693273458mer-1a6932733869327360145-6.88
ADediting_560963chr16_69327346_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-325chr1669327345693273528mer-1a6932734569327365146-14.92
ADediting_560964chr16_69327347_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-222-5pchr1669327345693273528mer-1a6932734569327368154-18.83
ADediting_560964chr16_69327347_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-30a-3pchr1669327343693273508mer-1a6932734369327369153-14.18
ADediting_560964chr16_69327347_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-30d-3pchr1669327343693273508mer-1a6932734369327369149-14.85
ADediting_560964chr16_69327347_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-30e-3pchr1669327343693273508mer-1a6932734369327368152-13.99
ADediting_560964chr16_69327347_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-936chr1669327346693273538mer-1a6932734669327368159-22.91
ADediting_560965chr16_69327350_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-374b-3pchr1669327345693273528mer-1a6932734569327367144-9.82
ADediting_560966chr16_69327361_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-520f-3pchr1669327357693273637mer-m86932735669327377147-15.32
ADediting_560967chr16_69327369_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1306-3pchr1669327369693273757mer-m86932736869327385152-23.71
ADediting_560968chr16_69327371_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3190-5pchr1669327371693273777mer-m86932737069327389152-19.64
ADediting_560970chr16_69327386_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-12113chr1669327386693273927mer-m86932738569327405147-19.86
ADediting_560970chr16_69327386_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4539chr1669327386693273927mer-m86932738569327404151-20
ADediting_560972chr16_69327392_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4732-3pchr1669327392693273987mer-m86932739169327411155-23.59
ADediting_560974chr16_69327400_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4726-3pchr1669327399693274057mer-m86932739869327420150-23.19
ADediting_560976chr16_69327410_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4485-5pchr1669327408693274158mer-1a6932740869327423150-22.86
ADediting_560977chr16_69327414_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4707-3pchr1669327410693274178mer-1a6932741069327435150-27
ADediting_560978chr16_69327418_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-18a-3pchr1669327413693274197mer-m86932741269327434148-20.49
ADediting_560978chr16_69327418_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4732-3pchr1669327416693274227mer-m86932741569327435153-26.39
ADediting_560978chr16_69327418_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-7976chr1669327414693274218mer-1a6932741469327431142-18.48
ADediting_560978chr16_69327418_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-874-3pchr1669327414693274207mer-m86932741369327436152-29.94
ADediting_560980chr16_69327435_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-371a-3pchr1669327430693274367mer-m86932742969327451144-15.05
ADediting_560981chr16_69327440_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-8052chr1669327435693274417mer-1a6932743569327453148-29.06
ADediting_560982chr16_69327441_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-513a-5pchr1669327440693274467mer-m86932743969327456152-17.32
ADediting_560982chr16_69327441_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-638chr1669327435693274417mer-1a6932743569327459155-34.38
ADediting_560983chr16_69327463_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3940-3pchr1669327459693274657mer-m86932745869327479140-17.58
ADediting_560983chr16_69327463_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6850-3pchr1669327462693274687mer-m86932746169327480151-27.57
ADediting_560985chr16_69327767_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3189-3pchr1669327766693277727mer-m86932776569327784145-25.82
ADediting_560985chr16_69327767_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6813-3pchr1669327765693277717mer-m86932776469327784140-12.15
ADediting_560986chr16_69327768_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-326chr1669327766693277727mer-m86932776569327784140-14.6
ADediting_560986chr16_69327768_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-330-5pchr1669327766693277727mer-m86932776569327786140-21.43
ADediting_560986chr16_69327768_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4314chr1669327767693277737mer-m86932776669327783140-21.61
ADediting_560986chr16_69327768_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-514a-5pchr1669327765693277717mer-m86932776469327787146-18.62
ADediting_560987chr16_69327790_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1288-3pchr1669327787693277937mer-m86932778669327807158-27.67
ADediting_560987chr16_69327790_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3169chr1669327786693277927mer-m86932778569327804151-18.63
ADediting_560987chr16_69327790_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5002-3pchr1669327788693277947mer-m86932778769327805159-20.74
ADediting_560988chr16_69327791_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6078chr1669327790693277978mer-1a6932779069327809152-20.35
ADediting_560989chr16_69327795_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4740-3pchr1669327793693277997mer-m86932779269327813140-18.47
ADediting_560991chr16_69327820_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3940-3pchr1669327816693278227mer-m86932781569327836142-21.15
ADediting_560992chr16_69327832_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-451bchr1669327829693278368mer-1a6932782969327850148-13.99
ADediting_560992chr16_69327832_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4696chr1669327831693278377mer-m86932783069327854143-19.24
ADediting_560994chr16_69327845_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-454-5pchr1669327843693278508mer-1a6932784369327864140-11.88
ADediting_560994chr16_69327845_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6883-3pchr1669327843693278497mer-m86932784269327863152-13.82
ADediting_560996chr16_69327852_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-371b-5pchr1669327849693278568mer-1a6932784969327870146-8.63
ADediting_560996chr16_69327852_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-373-5pchr1669327849693278568mer-1a6932784969327870142-8.61
ADediting_560996chr16_69327852_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-616-5pchr1669327849693278568mer-1a6932784969327870140-5.92
ADediting_560997chr16_69328011_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4634chr1669328006693280138mer-1a6932800669328026146-21.85
ADediting_560998chr16_69328021_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4690-3pchr1669328016693280238mer-1a6932801669328035165-30.74
ADediting_560998chr16_69328021_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5685chr1669328016693280238mer-1a6932801669328036153-19.71
ADediting_561000chr16_69328027_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4772-3pchr1669328024693280307mer-m86932802369328045158-20.38
ADediting_561003chr16_69328054_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6817-3pchr1669328054693280607mer-m86932805369328071147-20.32
ADediting_561005chr16_69328063_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-18a-3pchr1669328057693280648mer-1a6932805769328079140-15.72
ADediting_561005chr16_69328063_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-874-3pchr1669328059693280657mer-m86932805869328082153-29.81
ADediting_561006chr16_69328064_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4638-5pchr1669328062693280687mer-m86932806169328084145-21.76
ADediting_561007chr16_69328068_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6878-3pchr1669328063693280708mer-1a6932806369328083140-11.74
ADediting_561008chr16_69328069_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-8057chr1669328063693280697mer-1a6932806369328083140-19.98
ADediting_561009chr16_69328076_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1207-3pchr1669328076693280827mer-m86932807569328092140-12.56
ADediting_561009chr16_69328076_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-646chr1669328074693280807mer-m86932807369328091145-14.99
ADediting_561010chr16_69328085_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-8052chr1669328080693280867mer-1a6932808069328100141-20.59
ADediting_561012chr16_69328095_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4258chr1669328094693281007mer-m86932809369328109156-29
ADediting_561012chr16_69328095_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4707-3pchr1669328092693280998mer-1a6932809269328114156-31.23
ADediting_561014chr16_69328116_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6844chr1669328115693281217mer-m86932811469328135151-7.63
ADediting_561016chr16_69328121_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3680-3pchr1669328116693281238mer-1a6932811669328136144-15.16
ADediting_561018chr16_69328130_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-374b-3pchr1669328125693281328mer-1a6932812569328150146-14.99
ADediting_561019chr16_69328141_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3158-3pchr1669328137693281437mer-m86932813669328161157-26.16
ADediting_561019chr16_69328141_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-412-3pchr1669328141693281477mer-m86932814069328162145-17.3
ADediting_561019chr16_69328141_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6754-3pchr1669328141693281477mer-m86932814069328160150-18.21
ADediting_561020chr16_69328142_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1182chr1669328137693281437mer-m86932813669328158142-13.88
ADediting_561020chr16_69328142_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1229-3pchr1669328141693281477mer-m86932814069328164149-16.67
ADediting_561020chr16_69328142_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6511a-3pchr1669328141693281488mer-1a6932814169328162150-19.08
ADediting_561020chr16_69328142_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6511b-3pchr1669328141693281488mer-1a6932814169328164144-17.51
ADediting_561021chr16_69328151_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3190-5pchr1669328151693281577mer-m86932815069328169152-21.42
ADediting_561021chr16_69328151_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4793-5pchr1669328147693281537mer-m86932814669328170144-19.81
ADediting_561022chr16_69328166_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1200chr1669328164693281707mer-m86932816369328182160-26.74
ADediting_561023chr16_69328167_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-516a-5pchr1669328164693281707mer-m86932816369328185140-14.63
ADediting_561026chr16_69328213_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-371a-3pchr1669328208693282147mer-m86932820769328229145-17.36
ADediting_561027chr16_69328218_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-8052chr1669328213693282197mer-1a6932821369328231140-21.99
ADediting_561028chr16_69328219_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-513a-5pchr1669328218693282247mer-m86932821769328234140-14.58
ADediting_561028chr16_69328219_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-638chr1669328213693282197mer-1a6932821369328237153-30.97
ADediting_561029chr16_69328227_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4634chr1669328223693282297mer-m86932822269328240145-20.24
ADediting_561031chr16_69328241_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-941chr1669328238693282447mer-m86932823769328259147-22.04

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_560938chr16_69327161_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-204-5pchr1669327156693271638mer-1a6932715669327177142-10.74
ADediting_560938chr16_69327161_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-211-5pchr1669327156693271638mer-1a6932715669327177145-10.74
ADediting_560938chr16_69327161_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4755-5pchr1669327156693271627mer-m86932715569327176140-10.78
ADediting_560938chr16_69327161_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5006-3pchr1669327156693271627mer-m86932715569327175145-10.57
ADediting_560938chr16_69327161_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6832-3pchr1669327157693271648mer-1a6932715769327176159-9.61
ADediting_560940chr16_69327203_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-7107-3pchr1669327198693272058mer-1a6932719869327224141-19.97
ADediting_560942chr16_69327235_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6787-3pchr1669327233693272397mer-1a6932723369327257150-29.01
ADediting_560943chr16_69327244_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-324-3pchr1669327240693272467mer-m86932723969327261149-24.32
ADediting_560944chr16_69327253_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6836-3pchr1669327253693272597mer-m86932725269327272145-18.68
ADediting_560945chr16_69327257_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6778-3pchr1669327253693272608mer-1a6932725369327273142-17.34
ADediting_560945chr16_69327257_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6836-3pchr1669327253693272597mer-m86932725269327272145-18.68
ADediting_560946chr16_69327264_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4464chr1669327261693272677mer-m86932726069327279147-12.62
ADediting_560946chr16_69327264_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4748chr1669327261693272677mer-m86932726069327278151-14.65
ADediting_560946chr16_69327264_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-8055chr1669327264693272707mer-m86932726369327285140-10.27
ADediting_560947chr16_69327265_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4464chr1669327261693272677mer-m86932726069327279147-12.62
ADediting_560947chr16_69327265_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4748chr1669327261693272677mer-m86932726069327278151-14.65
ADediting_560947chr16_69327265_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-8055chr1669327264693272707mer-m86932726369327285140-10.27
ADediting_560948chr16_69327266_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4464chr1669327261693272677mer-m86932726069327279147-12.62
ADediting_560948chr16_69327266_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4748chr1669327261693272677mer-m86932726069327278151-14.65
ADediting_560948chr16_69327266_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5708chr1669327265693272728mer-1a6932726569327284151-19.57
ADediting_560948chr16_69327266_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-8055chr1669327264693272707mer-m86932726369327285140-10.27
ADediting_560949chr16_69327273_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-629-3pchr1669327273693272797mer-m86932727269327292152-22.1
ADediting_560950chr16_69327296_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-562chr1669327293693272997mer-m86932729269327311155-14.44
ADediting_560951chr16_69327300_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4679chr1669327299693273057mer-m86932729869327320149-13.36
ADediting_560952chr16_69327302_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4679chr1669327299693273057mer-m86932729869327320149-13.36
ADediting_560953chr16_69327305_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-10399-5pchr1669327304693273107mer-m86932730369327324147-15.44
ADediting_560953chr16_69327305_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6504-3pchr1669327304693273107mer-m86932730369327324142-11.31
ADediting_560954chr16_69327306_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-10399-5pchr1669327304693273107mer-m86932730369327324147-15.44
ADediting_560954chr16_69327306_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6504-3pchr1669327304693273107mer-m86932730369327324142-11.31
ADediting_560954chr16_69327306_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-7151-3pchr1669327305693273128mer-1a6932730569327325142-14
ADediting_560956chr16_69327332_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4735-5pchr1669327331693273377mer-m86932733069327351148-5.48
ADediting_560956chr16_69327332_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4775chr1669327332693273387mer-m86932733169327353153-6.96
ADediting_560957chr16_69327335_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-335-3pchr1669327335693273417mer-m86932733469327354146-4.4
ADediting_560957chr16_69327335_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4735-5pchr1669327331693273377mer-m86932733069327351148-5.48
ADediting_560957chr16_69327335_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4775chr1669327332693273387mer-m86932733169327353153-6.96
ADediting_560958chr16_69327336_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-335-3pchr1669327335693273417mer-m86932733469327354146-4.4
ADediting_560958chr16_69327336_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4735-5pchr1669327331693273377mer-m86932733069327351148-5.48
ADediting_560958chr16_69327336_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4775chr1669327332693273387mer-m86932733169327353153-6.96
ADediting_560967chr16_69327369_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4716-5pchr1669327366693273727mer-m86932736569327386140-10.69
ADediting_560967chr16_69327369_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4781-3pchr1669327368693273747mer-m86932736769327385144-13.86
ADediting_560968chr16_69327371_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4716-5pchr1669327366693273727mer-m86932736569327386140-10.69
ADediting_560968chr16_69327371_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4781-3pchr1669327368693273747mer-m86932736769327385144-13.86
ADediting_560969chr16_69327372_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4435chr1669327371693273788mer-1a6932737169327391146-17.76
ADediting_560969chr16_69327372_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4781-3pchr1669327368693273747mer-m86932736769327385144-13.86
ADediting_560972chr16_69327392_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4680-5pchr1669327387693273937mer-1a6932738769327407146-20.51
ADediting_560975chr16_69327405_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-125a-3pchr1669327400693274078mer-1a6932740069327421152-18.07
ADediting_560976chr16_69327410_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5001-3pchr1669327408693274147mer-m86932740769327428148-18
ADediting_560977chr16_69327414_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6747-3pchr1669327412693274187mer-m86932741169327432154-22.42
ADediting_560978chr16_69327418_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-10397-5pchr1669327416693274227mer-m86932741569327441151-23.21
ADediting_560979chr16_69327419_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-10397-5pchr1669327416693274227mer-m86932741569327441151-23.21
ADediting_560980chr16_69327435_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5089-5pchr1669327435693274417mer-m86932743469327453146-13.24
ADediting_560980chr16_69327435_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-512-3pchr1669327430693274367mer-m86932742969327450149-15
ADediting_560980chr16_69327435_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6506-5pchr1669327434693274407mer-m86932743369327455144-16.21
ADediting_560981chr16_69327440_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-10399-5pchr1669327439693274457mer-m86932743869327459144-10.33
ADediting_560981chr16_69327440_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5089-5pchr1669327435693274417mer-m86932743469327453146-13.24
ADediting_560982chr16_69327441_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-10399-5pchr1669327439693274457mer-m86932743869327459144-10.33
ADediting_560982chr16_69327441_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-7151-3pchr1669327440693274478mer-1a6932744069327456146-17.62
ADediting_560984chr16_69327755_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3151-3pchr1669327754693277607mer-m86932775369327773151-16.94
ADediting_560986chr16_69327768_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-887-5pchr1669327767693277748mer-1a6932776769327788148-16.01
ADediting_560989chr16_69327795_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4324chr1669327793693277997mer-m86932779269327811150-17.12
ADediting_560989chr16_69327795_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4329chr1669327794693278007mer-m86932779369327812146-18.91
ADediting_560990chr16_69327809_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1304-5pchr1669327807693278148mer-1a6932780769327828149-15.35
ADediting_560991chr16_69327820_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3187-5pchr1669327819693278257mer-m86932781869327841155-28.12
ADediting_560991chr16_69327820_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5189-5pchr1669327819693278257mer-m86932781869327840147-20.81
ADediting_560991chr16_69327820_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-612chr1669327819693278257mer-m86932781869327841153-23.53
ADediting_560991chr16_69327820_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-661chr1669327817693278237mer-m86932781669327840142-20.45
ADediting_560991chr16_69327820_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6860chr1669327819693278257mer-m86932781869327836148-22.51
ADediting_560991chr16_69327820_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-939-3pchr1669327818693278247mer-m86932781769327837140-15.63
ADediting_560993chr16_69327843_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-340-3pchr1669327840693278467mer-m86932783969327858149-15.89
ADediting_560993chr16_69327843_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6827-3pchr1669327840693278467mer-m86932783969327860151-17.41
ADediting_560994chr16_69327845_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-340-3pchr1669327840693278467mer-m86932783969327858149-15.89
ADediting_560994chr16_69327845_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6827-3pchr1669327840693278467mer-m86932783969327860151-17.41
ADediting_561001chr16_69328041_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1343-3pchr1669328038693280447mer-m86932803769328060143-22.04
ADediting_561001chr16_69328041_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6742-3pchr1669328038693280458mer-1a6932803869328057145-14.93
ADediting_561001chr16_69328041_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6783-3pchr1669328038693280447mer-m86932803769328057146-18.95
ADediting_561002chr16_69328051_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-26a-5pchr1669328045693280528mer-1a6932804569328066152-12.33
ADediting_561002chr16_69328051_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4465chr1669328045693280528mer-1a6932804569328069150-19.28
ADediting_561003chr16_69328054_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5571-5pchr1669328051693280588mer-1a6932805169328071140-9.36
ADediting_561004chr16_69328059_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5001-3pchr1669328057693280637mer-m86932805669328078144-15.33
ADediting_561010chr16_69328085_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-10399-5pchr1669328084693280907mer-m86932808369328103148-12.64
ADediting_561010chr16_69328085_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5089-5pchr1669328080693280867mer-m86932807969328097146-13.57
ADediting_561010chr16_69328085_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6504-3pchr1669328084693280907mer-m86932808369328104143-13.49
ADediting_561011chr16_69328092_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3907chr1669328090693280967mer-m86932808969328111146-22.99
ADediting_561011chr16_69328092_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-552-3pchr1669328086693280938mer-1a6932808669328105150-17.77
ADediting_561011chr16_69328092_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-764chr1669328088693280947mer-m86932808769328108153-24.57
ADediting_561012chr16_69328095_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3907chr1669328090693280967mer-m86932808969328111146-22.99
ADediting_561012chr16_69328095_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6788-3pchr1669328095693281017mer-m86932809469328113153-23.26
ADediting_561013chr16_69328112_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4735-5pchr1669328111693281177mer-m86932811069328131148-8.95
ADediting_561014chr16_69328116_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4735-5pchr1669328111693281177mer-m86932811069328131148-8.95
ADediting_561018chr16_69328130_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6832-5pchr1669328129693281357mer-m86932812869328150140-18.87
ADediting_561019chr16_69328141_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6823-5pchr1669328136693281427mer-m86932813569328155140-14.24
ADediting_561022chr16_69328166_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-526b-5pchr1669328164693281707mer-m86932816369328185141-12.98
ADediting_561023chr16_69328167_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-526b-5pchr1669328164693281707mer-m86932816369328185141-12.98
ADediting_561025chr16_69328183_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-640chr1669328183693281897mer-m86932818269328203146-23.32
ADediting_561026chr16_69328213_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5089-5pchr1669328213693282197mer-m86932821269328232144-11.97
ADediting_561026chr16_69328213_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-512-3pchr1669328208693282147mer-m86932820769328228149-15.51
ADediting_561026chr16_69328213_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6506-5pchr1669328212693282187mer-m86932821169328236148-18.89
ADediting_561027chr16_69328218_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-10399-5pchr1669328217693282237mer-m86932821669328237144-10.14
ADediting_561027chr16_69328218_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-5089-5pchr1669328213693282197mer-m86932821269328232144-11.97
ADediting_561027chr16_69328218_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6504-3pchr1669328217693282237mer-m86932821669328237148-12.95
ADediting_561028chr16_69328219_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-10399-5pchr1669328217693282237mer-m86932821669328237144-10.14
ADediting_561028chr16_69328219_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6504-3pchr1669328217693282237mer-m86932821669328237148-12.95
ADediting_561028chr16_69328219_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-7151-3pchr1669328218693282258mer-1a6932821869328238150-15.24
ADediting_561030chr16_69328235_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3130-3pchr1669328234693282407mer-m86932823369328254150-20.99
ADediting_561031chr16_69328241_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-3190-5pchr1669328240693282467mer-m86932823969328258143-16.29
ADediting_561031chr16_69328241_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4701-5pchr1669328241693282477mer-m86932824069328266149-20.46
ADediting_561031chr16_69328241_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-588chr1669328241693282477mer-m86932824069328258144-15.11
ADediting_561031chr16_69328241_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6765-3pchr1669328237693282437mer-m86932823669328256147-17.92
ADediting_561031chr16_69328241_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-6804-3pchr1669328235693282428mer-1a6932823569328257148-16.47

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1535954chr14_101045974_+ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-381-3pchr1669328707693287148mer-1a6932870769328728146-17.37
ADediting_496066chr15_66496985_-ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4512chr1669327526693275338mer-1a6932752669327546154-23.4
ADediting_843620chr2_207754818_+ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4775chr1669327641693276488mer-1a6932764169327664151-12.07
ADediting_843620chr2_207754818_+ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4775chr1669328804693288107mer-m86932880369328824157-11.7

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1596844chr1_162342605_+ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-556-3pchr1669328679693286868mer-1a6932867969328699146-10.52
ADediting_527135chr16_24203190_+ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-1273h-3pchr1669328735693287417mer-m86932873469328755140-18.89
ADediting_843620chr2_207754818_+ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4775chr1669327059693270657mer-m86932705869327079142-8.86
ADediting_843620chr2_207754818_+ENSG00000258429.2ENST00000288022.2PDF-201hsa-miR-4775chr1669327332693273387mer-m86932733169327353153-6.96

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PDF

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000288022.2protein_codingSoverviewSoverview

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
ADediting_560938ENST00000288022.2chr16_69327161_-2611-1161.30-1160.00-1253.10
ADediting_560939ENST00000288022.2chr16_69327197_-2575-1159.70-1160.00-1253.10
ADediting_560940ENST00000288022.2chr16_69327203_-2569-1160.00-1160.00-1253.10
ADediting_560941ENST00000288022.2chr16_69327233_-2539-1159.40-1160.00-1253.10
ADediting_560942ENST00000288022.2chr16_69327235_-2537-1162.20-1160.00-1253.10
ADediting_560943ENST00000288022.2chr16_69327244_-2528-1159.30-1160.00-1253.10
ADediting_560944ENST00000288022.2chr16_69327253_-2519-1161.40-1160.00-1253.10
ADediting_560945ENST00000288022.2chr16_69327257_-2515-1162.20-1160.00-1253.10
ADediting_560946ENST00000288022.2chr16_69327264_-2508-1164.40-1160.00-1253.10
ADediting_560947ENST00000288022.2chr16_69327265_-2507-1163.20-1160.00-1253.10
ADediting_560948ENST00000288022.2chr16_69327266_-2506-1160.10-1160.00-1253.10
ADediting_560949ENST00000288022.2chr16_69327273_-2499-1162.90-1160.00-1253.10
ADediting_560950ENST00000288022.2chr16_69327296_-2476-1161.10-1160.00-1253.10
ADediting_560951ENST00000288022.2chr16_69327300_-2472-1160.10-1160.00-1253.10
ADediting_560952ENST00000288022.2chr16_69327302_-2470-1162.10-1160.00-1253.10
ADediting_560953ENST00000288022.2chr16_69327305_-2467-1159.50-1160.00-1253.10
ADediting_560954ENST00000288022.2chr16_69327306_-2466-1159.50-1160.00-1253.10
ADediting_560955ENST00000288022.2chr16_69327316_-2456-1164.30-1160.00-1253.10
ADediting_560956ENST00000288022.2chr16_69327332_-2440-1165.70-1160.00-1253.10
ADediting_560957ENST00000288022.2chr16_69327335_-2437-1161.60-1160.00-1253.10
ADediting_560958ENST00000288022.2chr16_69327336_-2436-1161.40-1160.00-1253.10
ADediting_560959ENST00000288022.2chr16_69327341_-2431-1161.80-1160.00-1253.10
ADediting_560960ENST00000288022.2chr16_69327343_-2429-1161.10-1160.00-1253.10
ADediting_560961ENST00000288022.2chr16_69327344_-2428-1160.10-1160.00-1253.10
ADediting_560962ENST00000288022.2chr16_69327345_-2427-1162.00-1160.00-1253.10
ADediting_560963ENST00000288022.2chr16_69327346_-2426-1160.70-1160.00-1253.10
ADediting_560964ENST00000288022.2chr16_69327347_-2425-1160.10-1160.00-1253.10
ADediting_560965ENST00000288022.2chr16_69327350_-2422-1164.20-1160.00-1253.10
ADediting_560966ENST00000288022.2chr16_69327361_-2411-1159.80-1160.00-1253.10
ADediting_1543865ENST00000288022.2chr16_69327362_-2410-1165.70-1160.00-1253.10
ADediting_560967ENST00000288022.2chr16_69327369_-2403-1161.00-1160.00-1253.10
ADediting_560968ENST00000288022.2chr16_69327371_-2401-1160.10-1160.00-1253.10
ADediting_560969ENST00000288022.2chr16_69327372_-2400-1163.20-1160.00-1253.10
ADediting_560970ENST00000288022.2chr16_69327386_-2386-1161.60-1160.00-1253.10
ADediting_560971ENST00000288022.2chr16_69327387_-2385-1163.10-1160.00-1253.10
ADediting_560972ENST00000288022.2chr16_69327392_-2380-1160.70-1160.00-1253.10
ADediting_560973ENST00000288022.2chr16_69327395_-2377-1160.70-1160.00-1253.10
ADediting_560974ENST00000288022.2chr16_69327400_-2372-1159.70-1160.00-1253.10
ADediting_560975ENST00000288022.2chr16_69327405_-2367-1163.60-1160.00-1253.10
ADediting_560976ENST00000288022.2chr16_69327410_-2362-1164.40-1160.00-1253.10
ADediting_560977ENST00000288022.2chr16_69327414_-2358-1159.30-1160.00-1253.10
ADediting_560978ENST00000288022.2chr16_69327418_-2354-1159.90-1160.00-1253.10
ADediting_560979ENST00000288022.2chr16_69327419_-2353-1166.00-1160.00-1253.10
ADediting_560980ENST00000288022.2chr16_69327435_-2337-1159.30-1160.00-1253.10
ADediting_560981ENST00000288022.2chr16_69327440_-2332-1160.30-1160.00-1253.10
ADediting_560982ENST00000288022.2chr16_69327441_-2331-1161.20-1160.00-1253.10
ADediting_560983ENST00000288022.2chr16_69327463_-2309-1163.90-1160.00-1253.10
ADediting_560984ENST00000288022.2chr16_69327755_-2017-1159.30-1160.00-1253.10
ADediting_560985ENST00000288022.2chr16_69327767_-2005-1160.60-1160.00-1253.10
ADediting_560986ENST00000288022.2chr16_69327768_-2004-1160.10-1160.00-1253.10
ADediting_560987ENST00000288022.2chr16_69327790_-1982-1160.10-1160.00-1253.10
ADediting_560988ENST00000288022.2chr16_69327791_-1981-1164.20-1160.00-1253.10
ADediting_560989ENST00000288022.2chr16_69327795_-1977-1162.80-1160.00-1253.10
ADediting_560990ENST00000288022.2chr16_69327809_-1963-1163.10-1160.00-1253.10
ADediting_560991ENST00000288022.2chr16_69327820_-1952-1159.30-1160.00-1253.10
ADediting_560992ENST00000288022.2chr16_69327832_-1940-1165.30-1160.00-1253.10
ADediting_560993ENST00000288022.2chr16_69327843_-1929-1159.50-1160.00-1253.10
ADediting_560994ENST00000288022.2chr16_69327845_-1927-1159.00-1160.00-1253.10
ADediting_560995ENST00000288022.2chr16_69327847_-1925-1159.70-1160.00-1253.10
ADediting_560996ENST00000288022.2chr16_69327852_-1920-1162.70-1160.00-1253.10
ADediting_560997ENST00000288022.2chr16_69328011_-1761-1162.20-1160.00-1253.10
ADediting_560998ENST00000288022.2chr16_69328021_-1751-1161.60-1160.00-1253.10
ADediting_560999ENST00000288022.2chr16_69328025_-1747-1159.30-1160.00-1253.10
ADediting_561000ENST00000288022.2chr16_69328027_-1745-1164.20-1160.00-1253.10
ADediting_561001ENST00000288022.2chr16_69328041_-1731-1159.30-1160.00-1253.10
ADediting_561002ENST00000288022.2chr16_69328051_-1721-1163.10-1160.00-1253.10
ADediting_561003ENST00000288022.2chr16_69328054_-1718-1159.80-1160.00-1253.10
ADediting_561004ENST00000288022.2chr16_69328059_-1713-1159.30-1160.00-1253.10
ADediting_561005ENST00000288022.2chr16_69328063_-1709-1160.00-1160.00-1253.10
ADediting_561006ENST00000288022.2chr16_69328064_-1708-1163.70-1160.00-1253.10
ADediting_561007ENST00000288022.2chr16_69328068_-1704-1161.10-1160.00-1253.10
ADediting_561008ENST00000288022.2chr16_69328069_-1703-1159.70-1160.00-1253.10
ADediting_561009ENST00000288022.2chr16_69328076_-1696-1162.40-1160.00-1253.10
ADediting_561010ENST00000288022.2chr16_69328085_-1687-1161.40-1160.00-1253.10
ADediting_561011ENST00000288022.2chr16_69328092_-1680-1161.00-1160.00-1253.10
ADediting_561012ENST00000288022.2chr16_69328095_-1677-1160.30-1160.00-1253.10
ADediting_561013ENST00000288022.2chr16_69328112_-1660-1165.60-1160.00-1253.10
ADediting_561014ENST00000288022.2chr16_69328116_-1656-1160.30-1160.00-1253.10
ADediting_561015ENST00000288022.2chr16_69328118_-1654-1163.10-1160.00-1253.10
ADediting_561016ENST00000288022.2chr16_69328121_-1651-1160.30-1160.00-1253.10
ADediting_561017ENST00000288022.2chr16_69328125_-1647-1160.10-1160.00-1253.10
ADediting_561018ENST00000288022.2chr16_69328130_-1642-1161.00-1160.00-1253.10
ADediting_561019ENST00000288022.2chr16_69328141_-1631-1160.40-1160.00-1253.10
ADediting_561020ENST00000288022.2chr16_69328142_-1630-1164.80-1160.00-1253.10
ADediting_561021ENST00000288022.2chr16_69328151_-1621-1160.50-1160.00-1253.10
ADediting_561022ENST00000288022.2chr16_69328166_-1606-1162.80-1160.00-1253.10
ADediting_561023ENST00000288022.2chr16_69328167_-1605-1163.60-1160.00-1253.10
ADediting_561024ENST00000288022.2chr16_69328175_-1597-1159.90-1160.00-1253.10
ADediting_561025ENST00000288022.2chr16_69328183_-1589-1162.70-1160.00-1253.10
ADediting_561026ENST00000288022.2chr16_69328213_-1559-1159.30-1160.00-1253.10
ADediting_561027ENST00000288022.2chr16_69328218_-1554-1160.10-1160.00-1253.10
ADediting_561028ENST00000288022.2chr16_69328219_-1553-1161.00-1160.00-1253.10
ADediting_561029ENST00000288022.2chr16_69328227_-1545-1164.40-1160.00-1253.10
ADediting_561030ENST00000288022.2chr16_69328235_-1537-1160.40-1160.00-1253.10
ADediting_561031ENST00000288022.2chr16_69328241_-1531-1163.60-1160.00-1253.10

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for PDF

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC1.48118310510654e-070.2930627786961950.01563132462497150.1372041062766411.3461580402096e-310.599200590012148
AC1.91781097801763e-380.7021012948009731.21483088926949e-390.7099720869625641.90982558118457e-110.407980261144336
PCC1.29033501282979e-460.8147580383541248.97797342658054e-470.8155458979474341.27067233187212e-050.310063238470066
CER1.61363848283689e-230.7013516853842593.34156963509527e-260.7296298148615430.02014263934956350.189589605539833
TCX8.68033189340432e-330.7865280984355231.45582519838219e-170.6240093288621450.491606400935590.0565833815889965
FP1.00644118337363e-100.460396705243722.60442846421558e-100.4511966295189920.01292517185925880.186001993819909
IFG0.0005897606672998290.638710088370820.0003846839433069840.6546093701399850.3574168098056820.192174575781099
PG7.78744380505115e-160.5458637848326782.49480722946559e-120.4843001141763620.8979597082245230.00946655800083076
STG1.69326342136477e-120.6761484212516359.55759018339802e-090.5764733965019090.004088557991860440.310160948484252

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Relation with AD stages for PDF

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.
CER1.05843110375303e-050.409853691444509

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RelatedDrugs for PDF

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for PDF

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource