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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for RPS19

check button Gene summary
Gene informationGene symbol

RPS19

Gene ID

6223

Gene nameribosomal protein S19
SynonymsDBA|DBA1|LOH19CR1|S19|eS19
Cytomap

19q13.2

Type of geneprotein-coding
Description40S ribosomal protein S19loss of heterozygosity on chromosome 19, region 1loss of heterozygosity, 19, chromosomal region 1small ribosomal subunit protein eS19
Modification date20200313
UniProtAcc

P39019,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
RPS19

GO:0002548

monocyte chemotaxis

11226885

RPS19

GO:0031640

killing of cells of other organism

15019208

RPS19

GO:0050829

defense response to Gram-negative bacterium

15019208

RPS19

GO:0060265

positive regulation of respiratory burst involved in inflammatory response

15750715

RPS19

GO:0060266

negative regulation of respiratory burst involved in inflammatory response

15750715

RPS19

GO:0061844

antimicrobial humoral immune response mediated by antimicrobial peptide

15019208


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RNA A-to-I events for RPS19

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_755209(41862959, +), ADediting_755210(41863118, +), ADediting_755211(41863203, +), ADediting_755212(41863233, +), ADediting_755213(41863234, +), ADediting_755214(41863240, +), ADediting_755215(41863257, +), ADediting_755216(41863270, +), ADediting_755217(41863896, +), ADediting_755218(41863916, +), ADediting_755219(41863917, +), ADediting_755220(41863943, +), ADediting_755221(41863955, +), ADediting_755222(41863968, +), ADediting_755223(41863982, +), ADediting_755224(41863984, +), ADediting_755225(41864004, +), ADediting_755226(41864026, +), ADediting_755227(41864115, +), ADediting_755228(41864121, +), ADediting_755229(41865138, +), ADediting_755230(41865231, +), ADediting_755231(41865244, +), ADediting_755232(41865250, +), ADediting_755233(41865687, +), ADediting_755234(41865802, +), ADediting_755235(41865828, +), ADediting_755236(41865843, +), ADediting_755237(41865870, +), ADediting_755238(41866090, +), ADediting_755239(41866091, +), ADediting_755240(41866106, +), ADediting_755241(41866132, +), ADediting_755242(41866159, +), ADediting_755243(41866228, +), ADediting_755244(41866232, +), ADediting_755245(41866761, +), ADediting_755246(41866762, +), ADediting_755247(41866788, +), ADediting_755248(41866853, +), ADediting_755249(41866859, +), ADediting_755250(41866862, +), ADediting_755251(41866863, +), ADediting_755252(41866870, +), ADediting_755253(41866874, +), ADediting_755254(41866896, +), ADediting_755255(41866902, +), ADediting_755256(41866962, +), ADediting_755257(41867056, +), ADediting_755258(41867251, +), ADediting_755259(41867327, +), ADediting_755260(41867329, +), ADediting_755261(41867377, +), ADediting_755262(41867378, +), ADediting_755263(41867384, +), ADediting_755264(41867397, +), ADediting_755265(41867426, +), ADediting_755266(41867434, +), ADediting_755267(41867448, +), ADediting_755268(41867486, +), ADediting_755269(41867487, +), ADediting_755270(41867492, +), ADediting_755271(41867495, +), ADediting_755272(41867512, +), ADediting_755273(41867564, +), ADediting_755274(41869988, +), ADediting_755275(41870014, +), ADediting_755276(41870028, +), ADediting_755277(41870041, +), ADediting_755278(41870042, +), ADediting_755279(41870053, +), ADediting_755280(41870057, +), ADediting_755281(41870059, +), ADediting_755282(41870078, +), ADediting_755283(41870081, +), ADediting_755284(41870083, +), ADediting_755285(41870084, +), ADediting_755286(41870085, +), ADediting_755287(41870087, +), ADediting_755288(41870090, +), ADediting_755289(41870121, +), ADediting_755290(41870122, +), ADediting_755291(41870144, +), ADediting_755292(41870151, +), ADediting_755293(41870157, +), ADediting_755294(41870162, +), ADediting_755295(41870163, +), ADediting_755296(41870886, +), ADediting_755297(41870937, +), ADediting_755298(41870943, +), ADediting_755299(41870963, +), ADediting_755300(41870966, +), ADediting_755301(41870967, +), ADediting_755302(41870980, +), ADediting_755303(41870992, +), ADediting_755304(41871002, +), ADediting_755305(41871028, +), ADediting_755306(41871035, +), ADediting_755307(41871037, +), ADediting_755308(41871043, +), ADediting_755309(41871046, +), ADediting_755310(41871065, +), ADediting_755311(41871072, +), ADediting_755312(41871085, +), ADediting_755313(41871097, +), ADediting_755314(41871106, +), ADediting_755315(41871137, +), ADediting_755316(41871472, +), ADediting_755317(41871481, +), ADediting_755318(41871486, +), ADediting_755319(41871496, +), ADediting_755320(41871497, +), ADediting_755322(41871516, +), ADediting_755323(41871517, +), ADediting_755324(41871518, +), ADediting_755325(41871534, +), ADediting_755326(41871542, +), ADediting_755327(41871543, +), ADediting_755328(41871544, +), ADediting_755329(41871556, +), ADediting_755330(41871558, +), ADediting_755331(41871559, +), ADediting_755332(41871565, +), ADediting_755354(41872620, +), ADediting_755355(41872624, +), ADediting_755356(41872626, +), ADediting_755357(41872634, +), ADediting_755358(41872636, +), ADediting_755359(41872642, +), ADediting_755360(41872643, +), ADediting_755361(41872648, +), ADediting_755362(41872649, +), ADediting_755364(41872665, +), ADediting_755365(41872748, +), ADediting_755366(41872768, +), ADediting_755367(41872774, +), ADediting_755368(41872775, +), ADediting_755369(41872780, +), ADediting_755370(41872784, +), ADediting_755371(41872788, +), ADediting_755372(41872801, +), ADediting_755373(41872803, +), ADediting_755374(41872804, +), ADediting_755375(41872807, +), ADediting_755376(41872815, +), ADediting_755377(41872816, +), ADediting_755378(41872836, +), ADediting_755379(41872845, +), ADediting_755380(41872847, +), ADediting_755381(41872851, +), ADediting_755382(41872854, +), ADediting_755383(41872855, +), ADediting_755384(41872861, +), ADediting_1556224(41869979, +), ADediting_1556225(41870019, +), ADediting_1556226(41870020, +), ADediting_1556227(41870033, +), ADediting_1556228(41870066, +), ADediting_1556229(41870067, +), ADediting_1556230(41870082, +), ADediting_1556231(41870154, +), ADediting_1556232(41870221, +), ADediting_1556233(41870233, +), ADediting_1631474(41863063, +),

Top

RNA editing positional annotations for RPS19 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
ADediting_755217chr19_41863896_+synonymous SNVENST00000598399.1c.A195Gp.V65V...
ADediting_755218chr19_41863916_+synonymous SNVENST00000598399.1c.A215Gp.X72X...
ADediting_755219chr19_41863917_+synonymous SNVENST00000598399.1c.A216Gp.X72X...

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_755209chr19_41862959_+intronic
ADediting_755210chr19_41863118_+intronic
ADediting_755211chr19_41863203_+intronic
ADediting_755212chr19_41863233_+intronic
ADediting_755213chr19_41863234_+intronic
ADediting_755214chr19_41863240_+intronic
ADediting_755215chr19_41863257_+intronic
ADediting_755216chr19_41863270_+intronic
ADediting_755217chr19_41863896_+exonic
ADediting_755218chr19_41863916_+exonic
ADediting_755219chr19_41863917_+exonic
ADediting_755220chr19_41863943_+UTR3
ADediting_755221chr19_41863955_+UTR3
ADediting_755222chr19_41863968_+UTR3
ADediting_755223chr19_41863982_+UTR3
ADediting_755224chr19_41863984_+UTR3
ADediting_755225chr19_41864004_+intronic
ADediting_755226chr19_41864026_+intronic
ADediting_755227chr19_41864115_+intronic
ADediting_755228chr19_41864121_+intronic
ADediting_755229chr19_41865138_+intronic
ADediting_755230chr19_41865231_+intronic
ADediting_755231chr19_41865244_+intronic
ADediting_755232chr19_41865250_+intronic
ADediting_755233chr19_41865687_+intronic
ADediting_755234chr19_41865802_+intronic
ADediting_755235chr19_41865828_+intronic
ADediting_755236chr19_41865843_+intronic
ADediting_755237chr19_41865870_+intronic
ADediting_755238chr19_41866090_+intronic
ADediting_755239chr19_41866091_+intronic
ADediting_755240chr19_41866106_+intronic
ADediting_755241chr19_41866132_+intronic
ADediting_755242chr19_41866159_+intronic
ADediting_755243chr19_41866228_+intronic
ADediting_755244chr19_41866232_+intronic
ADediting_755245chr19_41866761_+intronic
ADediting_755246chr19_41866762_+intronic
ADediting_755247chr19_41866788_+intronic
ADediting_755248chr19_41866853_+intronic
ADediting_755249chr19_41866859_+intronic
ADediting_755250chr19_41866862_+intronic
ADediting_755251chr19_41866863_+intronic
ADediting_755252chr19_41866870_+intronic
ADediting_755253chr19_41866874_+intronic
ADediting_755254chr19_41866896_+intronic
ADediting_755255chr19_41866902_+intronic
ADediting_755256chr19_41866962_+intronic
ADediting_755257chr19_41867056_+intronic
ADediting_755258chr19_41867251_+intronic
ADediting_755259chr19_41867327_+intronic
ADediting_755260chr19_41867329_+intronic
ADediting_755261chr19_41867377_+intronic
ADediting_755262chr19_41867378_+intronic
ADediting_755263chr19_41867384_+intronic
ADediting_755264chr19_41867397_+intronic
ADediting_755265chr19_41867426_+intronic
ADediting_755266chr19_41867434_+intronic
ADediting_755267chr19_41867448_+intronic
ADediting_755268chr19_41867486_+intronic
ADediting_755269chr19_41867487_+intronic
ADediting_755270chr19_41867492_+intronic
ADediting_755271chr19_41867495_+intronic
ADediting_755272chr19_41867512_+intronic
ADediting_755273chr19_41867564_+intronic
ADediting_755274chr19_41869988_+intronic
ADediting_755275chr19_41870014_+intronic
ADediting_755276chr19_41870028_+intronic
ADediting_755277chr19_41870041_+intronic
ADediting_755278chr19_41870042_+intronic
ADediting_755279chr19_41870053_+intronic
ADediting_755280chr19_41870057_+intronic
ADediting_755281chr19_41870059_+intronic
ADediting_755282chr19_41870078_+intronic
ADediting_755283chr19_41870081_+intronic
ADediting_755284chr19_41870083_+intronic
ADediting_755285chr19_41870084_+intronic
ADediting_755286chr19_41870085_+intronic
ADediting_755287chr19_41870087_+intronic
ADediting_755288chr19_41870090_+intronic
ADediting_755289chr19_41870121_+intronic
ADediting_755290chr19_41870122_+intronic
ADediting_755291chr19_41870144_+intronic
ADediting_755292chr19_41870151_+intronic
ADediting_755293chr19_41870157_+intronic
ADediting_755294chr19_41870162_+intronic
ADediting_755295chr19_41870163_+intronic
ADediting_755296chr19_41870886_+intronic
ADediting_755297chr19_41870937_+intronic
ADediting_755298chr19_41870943_+intronic
ADediting_755299chr19_41870963_+intronic
ADediting_755300chr19_41870966_+intronic
ADediting_755301chr19_41870967_+intronic
ADediting_755302chr19_41870980_+intronic
ADediting_755303chr19_41870992_+intronic
ADediting_755304chr19_41871002_+intronic
ADediting_755305chr19_41871028_+intronic
ADediting_755306chr19_41871035_+intronic
ADediting_755307chr19_41871037_+intronic
ADediting_755308chr19_41871043_+intronic
ADediting_755309chr19_41871046_+intronic
ADediting_755310chr19_41871065_+intronic
ADediting_755311chr19_41871072_+intronic
ADediting_755312chr19_41871085_+intronic
ADediting_755313chr19_41871097_+intronic
ADediting_755314chr19_41871106_+intronic
ADediting_755315chr19_41871137_+intronic
ADediting_755316chr19_41871472_+UTR3
ADediting_755317chr19_41871481_+UTR3
ADediting_755318chr19_41871486_+UTR3
ADediting_755319chr19_41871496_+UTR3
ADediting_755320chr19_41871497_+UTR3
ADediting_755322chr19_41871516_+UTR3
ADediting_755323chr19_41871517_+UTR3
ADediting_755324chr19_41871518_+UTR3
ADediting_755325chr19_41871534_+UTR3
ADediting_755326chr19_41871542_+UTR3
ADediting_755327chr19_41871543_+UTR3
ADediting_755328chr19_41871544_+UTR3
ADediting_755329chr19_41871556_+UTR3
ADediting_755330chr19_41871558_+UTR3
ADediting_755331chr19_41871559_+UTR3
ADediting_755332chr19_41871565_+UTR3
ADediting_755354chr19_41872620_+UTR3
ADediting_755355chr19_41872624_+UTR3
ADediting_755356chr19_41872626_+UTR3
ADediting_755357chr19_41872634_+UTR3
ADediting_755358chr19_41872636_+UTR3
ADediting_755359chr19_41872642_+UTR3
ADediting_755360chr19_41872643_+UTR3
ADediting_755361chr19_41872648_+UTR3
ADediting_755362chr19_41872649_+UTR3
ADediting_755364chr19_41872665_+UTR3
ADediting_755365chr19_41872748_+UTR3
ADediting_755366chr19_41872768_+UTR3
ADediting_755367chr19_41872774_+UTR3
ADediting_755368chr19_41872775_+UTR3
ADediting_755369chr19_41872780_+UTR3
ADediting_755370chr19_41872784_+UTR3
ADediting_755371chr19_41872788_+UTR3
ADediting_755372chr19_41872801_+UTR3
ADediting_755373chr19_41872803_+UTR3
ADediting_755374chr19_41872804_+UTR3
ADediting_755375chr19_41872807_+UTR3
ADediting_755376chr19_41872815_+UTR3
ADediting_755377chr19_41872816_+UTR3
ADediting_755378chr19_41872836_+UTR3
ADediting_755379chr19_41872845_+UTR3
ADediting_755380chr19_41872847_+UTR3
ADediting_755381chr19_41872851_+UTR3
ADediting_755382chr19_41872854_+UTR3
ADediting_755383chr19_41872855_+UTR3
ADediting_755384chr19_41872861_+UTR3
ADediting_1556224chr19_41869979_+intronic
ADediting_1556225chr19_41870019_+intronic
ADediting_1556226chr19_41870020_+intronic
ADediting_1556227chr19_41870033_+intronic
ADediting_1556228chr19_41870066_+intronic
ADediting_1556229chr19_41870067_+intronic
ADediting_1556230chr19_41870082_+intronic
ADediting_1556231chr19_41870154_+intronic
ADediting_1556232chr19_41870221_+intronic
ADediting_1556233chr19_41870233_+intronic
ADediting_1631474chr19_41863063_+intronic

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_755209chr19_41862959_+DNAhAT-CharlieName=MER58B
ADediting_755210chr19_41863118_+SINEAluName=AluJo
ADediting_755211chr19_41863203_+SINEAluName=AluJo
ADediting_755212chr19_41863233_+SINEAluName=AluJo
ADediting_755213chr19_41863234_+SINEAluName=AluJo
ADediting_755214chr19_41863240_+SINEAluName=AluJo
ADediting_755215chr19_41863257_+SINEAluName=AluJo
ADediting_755216chr19_41863270_+SINEAluName=AluJo
ADediting_755217chr19_41863896_+SINEAluName=AluSc
ADediting_755218chr19_41863916_+SINEAluName=AluSc
ADediting_755219chr19_41863917_+SINEAluName=AluSc
ADediting_755220chr19_41863943_+SINEAluName=AluSc
ADediting_755221chr19_41863955_+SINEAluName=AluSc
ADediting_755222chr19_41863968_+SINEAluName=AluSc
ADediting_755223chr19_41863982_+SINEAluName=AluSc
ADediting_755224chr19_41863984_+SINEAluName=AluSc
ADediting_755225chr19_41864004_+SINEAluName=AluSc
ADediting_755226chr19_41864026_+SINEAluName=AluSc
ADediting_755227chr19_41864115_+SINEAluName=AluSc
ADediting_755228chr19_41864121_+SINEAluName=AluSc
ADediting_755229chr19_41865138_+SINEAluName=AluSx1
ADediting_755230chr19_41865231_+SINEAluName=AluSx1
ADediting_755231chr19_41865244_+SINEAluName=AluSx1
ADediting_755232chr19_41865250_+SINEAluName=AluSx1
ADediting_755233chr19_41865687_+SINEAluName=AluY
ADediting_755234chr19_41865802_+SINEAluName=AluY
ADediting_755235chr19_41865828_+SINEAluName=AluY
ADediting_755236chr19_41865843_+SINEAluName=AluY
ADediting_755237chr19_41865870_+SINEAluName=AluY
ADediting_755238chr19_41866090_+SINEAluName=AluSx3
ADediting_755239chr19_41866091_+SINEAluName=AluSx3
ADediting_755240chr19_41866106_+SINEAluName=AluSx3
ADediting_755241chr19_41866132_+SINEAluName=AluSx3
ADediting_755242chr19_41866159_+SINEAluName=AluSx3
ADediting_755243chr19_41866228_+SINEAluName=AluSx3
ADediting_755244chr19_41866232_+SINEAluName=AluSx3
ADediting_755245chr19_41866761_+SINEAluName=AluYm1
ADediting_755246chr19_41866762_+SINEAluName=AluYm1
ADediting_755247chr19_41866788_+SINEAluName=AluYm1
ADediting_755248chr19_41866853_+SINEAluName=AluYm1
ADediting_755249chr19_41866859_+SINEAluName=AluYm1
ADediting_755250chr19_41866862_+SINEAluName=AluYm1
ADediting_755251chr19_41866863_+SINEAluName=AluYm1
ADediting_755252chr19_41866870_+SINEAluName=AluYm1
ADediting_755253chr19_41866874_+SINEAluName=AluYm1
ADediting_755254chr19_41866896_+SINEAluName=AluYm1
ADediting_755255chr19_41866902_+SINEAluName=AluYm1
ADediting_755256chr19_41866962_+SINEAluName=AluYm1
ADediting_755257chr19_41867056_+SINEAluName=AluJb
ADediting_755258chr19_41867251_+SINEAluName=AluJb
ADediting_755259chr19_41867327_+SINEAluName=AluSx
ADediting_755260chr19_41867329_+SINEAluName=AluSx
ADediting_755261chr19_41867377_+SINEAluName=AluSx
ADediting_755262chr19_41867378_+SINEAluName=AluSx
ADediting_755263chr19_41867384_+SINEAluName=AluSx
ADediting_755264chr19_41867397_+SINEAluName=AluSx
ADediting_755265chr19_41867426_+SINEAluName=AluSx
ADediting_755266chr19_41867434_+SINEAluName=AluSx
ADediting_755267chr19_41867448_+SINEAluName=AluSx
ADediting_755268chr19_41867486_+SINEAluName=AluSx
ADediting_755269chr19_41867487_+SINEAluName=AluSx
ADediting_755270chr19_41867492_+SINEAluName=AluSx
ADediting_755271chr19_41867495_+SINEAluName=AluSx
ADediting_755272chr19_41867512_+SINEAluName=AluSx
ADediting_755273chr19_41867564_+SINEAluName=AluSx
ADediting_755274chr19_41869988_+SINEAluName=AluSp
ADediting_755275chr19_41870014_+SINEAluName=AluSp
ADediting_755276chr19_41870028_+SINEAluName=AluSp
ADediting_755277chr19_41870041_+SINEAluName=AluSp
ADediting_755278chr19_41870042_+SINEAluName=AluSp
ADediting_755279chr19_41870053_+SINEAluName=AluSp
ADediting_755280chr19_41870057_+SINEAluName=AluSp
ADediting_755281chr19_41870059_+SINEAluName=AluSp
ADediting_755282chr19_41870078_+SINEAluName=AluSp
ADediting_755283chr19_41870081_+SINEAluName=AluSp
ADediting_755284chr19_41870083_+SINEAluName=AluSp
ADediting_755285chr19_41870084_+SINEAluName=AluSp
ADediting_755286chr19_41870085_+SINEAluName=AluSp
ADediting_755287chr19_41870087_+SINEAluName=AluSp
ADediting_755288chr19_41870090_+SINEAluName=AluSp
ADediting_755289chr19_41870121_+SINEAluName=AluSp
ADediting_755290chr19_41870122_+SINEAluName=AluSp
ADediting_755291chr19_41870144_+SINEAluName=AluSp
ADediting_755292chr19_41870151_+SINEAluName=AluSp
ADediting_755293chr19_41870157_+SINEAluName=AluSp
ADediting_755294chr19_41870162_+SINEAluName=AluSp
ADediting_755295chr19_41870163_+SINEAluName=AluSp
ADediting_755296chr19_41870886_+SINEAluName=AluSx
ADediting_755297chr19_41870937_+SINEAluName=AluSx
ADediting_755298chr19_41870943_+SINEAluName=AluSx
ADediting_755299chr19_41870963_+SINEAluName=AluSx
ADediting_755300chr19_41870966_+SINEAluName=AluSx
ADediting_755301chr19_41870967_+SINEAluName=AluSx
ADediting_755302chr19_41870980_+SINEAluName=AluSx
ADediting_755303chr19_41870992_+SINEAluName=AluSx
ADediting_755304chr19_41871002_+SINEAluName=AluSx
ADediting_755305chr19_41871028_+SINEAluName=AluSx
ADediting_755306chr19_41871035_+SINEAluName=AluSx
ADediting_755307chr19_41871037_+SINEAluName=AluSx
ADediting_755308chr19_41871043_+SINEAluName=AluSx
ADediting_755309chr19_41871046_+SINEAluName=AluSx
ADediting_755310chr19_41871065_+SINEAluName=AluSx
ADediting_755311chr19_41871072_+SINEAluName=AluSx
ADediting_755312chr19_41871085_+SINEAluName=AluSx
ADediting_755313chr19_41871097_+SINEAluName=AluSx
ADediting_755314chr19_41871106_+SINEAluName=AluSx
ADediting_755315chr19_41871137_+SINEAluName=AluSx
ADediting_755316chr19_41871472_+SINEAluName=AluSx
ADediting_755317chr19_41871481_+SINEAluName=AluSx
ADediting_755318chr19_41871486_+SINEAluName=AluSx
ADediting_755319chr19_41871496_+SINEAluName=AluSx
ADediting_755320chr19_41871497_+SINEAluName=AluSx
ADediting_755322chr19_41871516_+SINEAluName=AluSx
ADediting_755323chr19_41871517_+SINEAluName=AluSx
ADediting_755324chr19_41871518_+SINEAluName=AluSx
ADediting_755325chr19_41871534_+SINEAluName=AluSx
ADediting_755326chr19_41871542_+SINEAluName=AluSx
ADediting_755327chr19_41871543_+SINEAluName=AluSx
ADediting_755328chr19_41871544_+SINEAluName=AluSx
ADediting_755329chr19_41871556_+SINEAluName=AluSx
ADediting_755330chr19_41871558_+SINEAluName=AluSx
ADediting_755331chr19_41871559_+SINEAluName=AluSx
ADediting_755332chr19_41871565_+SINEAluName=AluSx
ADediting_755354chr19_41872620_+SINEAluName=AluSp
ADediting_755355chr19_41872624_+SINEAluName=AluSp
ADediting_755356chr19_41872626_+SINEAluName=AluSp
ADediting_755357chr19_41872634_+SINEAluName=AluSp
ADediting_755358chr19_41872636_+SINEAluName=AluSp
ADediting_755359chr19_41872642_+SINEAluName=AluSp
ADediting_755360chr19_41872643_+SINEAluName=AluSp
ADediting_755361chr19_41872648_+SINEAluName=AluSp
ADediting_755362chr19_41872649_+SINEAluName=AluSp
ADediting_755364chr19_41872665_+SINEAluName=AluSp
ADediting_755365chr19_41872748_+SINEAluName=AluSp
ADediting_755366chr19_41872768_+SINEAluName=AluSp
ADediting_755367chr19_41872774_+SINEAluName=AluSp
ADediting_755368chr19_41872775_+SINEAluName=AluSp
ADediting_755369chr19_41872780_+SINEAluName=AluSp
ADediting_755370chr19_41872784_+SINEAluName=AluSp
ADediting_755371chr19_41872788_+SINEAluName=AluSp
ADediting_755372chr19_41872801_+SINEAluName=AluSp
ADediting_755373chr19_41872803_+SINEAluName=AluSp
ADediting_755374chr19_41872804_+SINEAluName=AluSp
ADediting_755375chr19_41872807_+SINEAluName=AluSp
ADediting_755376chr19_41872815_+SINEAluName=AluSp
ADediting_755377chr19_41872816_+SINEAluName=AluSp
ADediting_755378chr19_41872836_+SINEAluName=AluSp
ADediting_755379chr19_41872845_+SINEAluName=AluSp
ADediting_755380chr19_41872847_+SINEAluName=AluSp
ADediting_755381chr19_41872851_+SINEAluName=AluSp
ADediting_755382chr19_41872854_+SINEAluName=AluSp
ADediting_755383chr19_41872855_+SINEAluName=AluSp
ADediting_755384chr19_41872861_+SINEAluName=AluSp
ADediting_1556224chr19_41869979_+SINEAluName=AluSp
ADediting_1556225chr19_41870019_+SINEAluName=AluSp
ADediting_1556226chr19_41870020_+SINEAluName=AluSp
ADediting_1556227chr19_41870033_+SINEAluName=AluSp
ADediting_1556228chr19_41870066_+SINEAluName=AluSp
ADediting_1556229chr19_41870067_+SINEAluName=AluSp
ADediting_1556230chr19_41870082_+SINEAluName=AluSp
ADediting_1556231chr19_41870154_+SINEAluName=AluSp
ADediting_1556232chr19_41870221_+SINEAluName=AluSp
ADediting_1556233chr19_41870233_+SINEAluName=AluSp
ADediting_1631474chr19_41863063_+SINEAluName=AluJo

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RNA A-to-I editing events in the alternative splicing sites for RPS19

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESADediting_755224chr19_41863984_+41863983:418639915ss2eCAGGTGCCC5.77CGGGTGCCC0.66

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RPS19

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
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check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
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check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
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ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for RPS19

check button- Lollipop plot for RNA A-to-I editings across protein structure.
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The effects of the RNA editing to the miRNA binding sites for RPS19

check buttonRNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
all structure

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_755318chr19_41871486_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4537chr1941871483418714908mer-1a4187147041871490154-25.95
ADediting_755320chr19_41871497_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-17-3pchr1941871490418714967mer-m84187147641871497150-17.83
ADediting_755320chr19_41871497_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4418chr1941871491418714977mer-m84187147941871498149-14.74
ADediting_755320chr19_41871497_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-509-3-5pchr1941871491418714977mer-m84187147741871498140-15.45
ADediting_755320chr19_41871497_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-509-5pchr1941871491418714977mer-m84187147841871498151-13.05
ADediting_755320chr19_41871497_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-873-3pchr1941871494418715007mer-m84187147841871501153-25.14
ADediting_755322chr19_41871516_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-1298-5pchr1941871514418715207mer-m84187150241871521157-19.2
ADediting_755323chr19_41871517_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-12113chr1941871511418715177mer-1a4187149341871517142-22.53
ADediting_755323chr19_41871517_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-452-3pchr1941871514418715207mer-m84187149841871521151-16.36
ADediting_755324chr19_41871518_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-34b-3pchr1941871516418715227mer-m84187150041871523148-11.23
ADediting_755324chr19_41871518_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-3614-5pchr1941871514418715207mer-1a4187149741871520159-25.9
ADediting_755325chr19_41871534_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6089chr1941871532418715387mer-m84187151641871539164-37.83
ADediting_755326chr19_41871542_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6771-5pchr1941871536418715438mer-1a4187152441871543160-29.74
ADediting_755327chr19_41871543_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-326chr1941871538418715447mer-m84187152641871545140-13.96
ADediting_755327chr19_41871543_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-330-5pchr1941871538418715447mer-m84187152241871545143-22.06
ADediting_755327chr19_41871543_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4314chr1941871537418715437mer-m84187152641871544143-24.03
ADediting_755327chr19_41871543_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-514a-5pchr1941871539418715457mer-m84187152341871546150-18.62
ADediting_755328chr19_41871544_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-3189-3pchr1941871538418715447mer-m84187152641871545149-25.49
ADediting_755328chr19_41871544_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6813-3pchr1941871539418715457mer-m84187152641871546140-11.59
ADediting_755329chr19_41871556_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-106a-3pchr1941871552418715587mer-1a4187153741871558141-16.54
ADediting_755331chr19_41871559_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-1228-3pchr1941871557418715648mer-1a4187154741871564147-21.88
ADediting_755332chr19_41871565_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-663bchr1941871563418715697mer-m84187154941871570147-19.28
ADediting_755354chr19_41872620_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6850-3pchr1941872614418726207mer-m84187260241872621148-24.32
ADediting_755355chr19_41872624_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6720-3pchr1941872618418726258mer-1a4187260341872625151-18.3
ADediting_755359chr19_41872642_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-513a-5pchr1941872636418726427mer-m84187262641872643144-17.77
ADediting_755360chr19_41872643_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-3672chr1941872641418726488mer-1a4187262341872648150-13.27
ADediting_755360chr19_41872643_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6864-3pchr1941872641418726488mer-1a4187262841872648142-10.97
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-302a-3pchr1941872647418726537mer-m84187263341872654147-15.45
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-302b-3pchr1941872647418726537mer-m84187263441872654145-9.54
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-302c-3pchr1941872647418726537mer-m84187263441872654149-11.96
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-302d-3pchr1941872647418726537mer-m84187262741872654152-14.53
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-302echr1941872647418726537mer-m84187263841872654141-8.62
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-372-3pchr1941872647418726537mer-m84187262741872654159-20.52
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-373-3pchr1941872647418726537mer-m84187263141872654164-22.27
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-512-3pchr1941872646418726527mer-m84187262941872653151-18.66
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-520a-3pchr1941872647418726537mer-m84187263341872654140-11.04
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-520b-3pchr1941872647418726537mer-m84187263541872654141-16.53
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-520c-3pchr1941872647418726537mer-m84187263441872654146-16.53
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-520d-3pchr1941872647418726537mer-m84187263141872654142-15.59
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-520e-3pchr1941872647418726537mer-m84187263441872654140-13.33
ADediting_755362chr19_41872649_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-7160-5pchr1941872644418726507mer-1a4187263041872650144-25.98
ADediting_755364chr19_41872665_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4449chr1941872661418726677mer-m84187264941872668149-28.81
ADediting_755367chr19_41872774_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-513a-5pchr1941872768418727747mer-m84187275841872775148-20.59
ADediting_755367chr19_41872774_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-638chr1941872773418727797mer-1a4187275541872779155-32.5
ADediting_755368chr19_41872775_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-8052chr1941872773418727797mer-1a4187275941872779141-21.07
ADediting_755370chr19_41872784_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-1207-3pchr1941872777418727837mer-m84187276741872784140-12.56
ADediting_755370chr19_41872784_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-646chr1941872779418727857mer-m84187276841872786145-14.99
ADediting_755372chr19_41872801_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-718chr1941872797418728037mer-m84187278341872804148-24.87
ADediting_755373chr19_41872803_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-1976chr1941872798418728058mer-1a4187278541872805153-25.04
ADediting_755373chr19_41872803_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6747-3pchr1941872796418728038mer-1a4187278141872803149-23.42
ADediting_755374chr19_41872804_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-145-3pchr1941872802418728087mer-m84187278841872809140-11.58
ADediting_755374chr19_41872804_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-3059-5pchr1941872800418728067mer-m84187278141872807150-22.17
ADediting_755374chr19_41872804_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6780a-3pchr1941872799418728068mer-1a4187278541872806158-22.16
ADediting_755375chr19_41872807_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4431chr1941872803418728097mer-m84187278941872810140-18.98
ADediting_755376chr19_41872815_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-615-5pchr1941872813418728197mer-m84187279741872820147-20.62
ADediting_755377chr19_41872816_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4283chr1941872813418728197mer-m84187280341872820158-26
ADediting_755377chr19_41872816_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4508chr1941872814418728207mer-m84187280441872821152-25.43
ADediting_755379chr19_41872845_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4733-5pchr1941872841418728477mer-m84187282541872848145-18.73
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-1269achr1941872858418728647mer-m84187284541872865143-22.32
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-1269bchr1941872858418728647mer-m84187284541872865145-21.26
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-1288-3pchr1941872857418728648mer-1a4187283941872864146-21.9
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-378a-3pchr1941872859418728657mer-m84187284641872866144-14.62
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-378bchr1941872859418728657mer-m84187284841872866140-13.88
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-378cchr1941872859418728657mer-m84187284341872866144-14.94
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-378dchr1941872859418728657mer-m84187284841872866144-13.88
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-378echr1941872859418728657mer-m84187284941872866144-13.88
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-378fchr1941872859418728657mer-m84187284541872866141-13.17
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-378hchr1941872859418728657mer-m84187284441872866145-15.68
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-378ichr1941872859418728657mer-m84187284741872866144-13.88
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-422achr1941872859418728657mer-m84187284541872866140-14.52

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_755316chr19_41871472_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-324-3pchr1941871469418714757mer-m84187145441871476148-24.15
ADediting_755316chr19_41871472_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4252chr1941871470418714767mer-m84187145741871477149-21.82
ADediting_755316chr19_41871472_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4793-3pchr1941871466418714727mer-m84187145141871473153-23.14
ADediting_755318chr19_41871486_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-3160-3pchr1941871483418714908mer-1a4187146941871490150-19.59
ADediting_755319chr19_41871496_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-5186chr1941871494418715007mer-m84187148241871501145-11.51
ADediting_755319chr19_41871496_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6516-5pchr1941871490418714967mer-m84187147541871497149-14.33
ADediting_755320chr19_41871497_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-5186chr1941871494418715007mer-m84187148241871501145-11.51
ADediting_755320chr19_41871497_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6516-5pchr1941871490418714967mer-m84187147541871497149-14.33
ADediting_755322chr19_41871516_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-579-3pchr1941871514418715207mer-m84187149841871521147-12.04
ADediting_755322chr19_41871516_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-664b-3pchr1941871514418715207mer-m84187150141871521150-17.61
ADediting_755323chr19_41871517_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-579-3pchr1941871514418715207mer-m84187149841871521147-12.04
ADediting_755323chr19_41871517_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-664b-3pchr1941871514418715207mer-m84187150141871521150-17.61
ADediting_755324chr19_41871518_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-579-3pchr1941871514418715207mer-m84187149841871521147-12.04
ADediting_755324chr19_41871518_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-664b-3pchr1941871514418715207mer-m84187150141871521150-17.61
ADediting_755325chr19_41871534_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4478chr1941871531418715377mer-m84187152341871538149-25.05
ADediting_755325chr19_41871534_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4649-3pchr1941871528418715347mer-m84187151541871535140-14.11
ADediting_755325chr19_41871534_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-7160-5pchr1941871529418715357mer-m84187151641871536146-17.63
ADediting_755326chr19_41871542_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-30b-3pchr1941871535418715428mer-1a4187152141871542151-15.38
ADediting_755326chr19_41871542_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-3689a-3pchr1941871535418715428mer-1a4187152241871542147-18.72
ADediting_755326chr19_41871542_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-3689b-3pchr1941871535418715428mer-1a4187152241871542147-17.55
ADediting_755326chr19_41871542_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-3689cchr1941871535418715428mer-1a4187152241871542147-17.55
ADediting_755326chr19_41871542_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6779-5pchr1941871535418715428mer-1a4187152441871542148-22.58
ADediting_755326chr19_41871542_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6780a-5pchr1941871535418715428mer-1a4187151941871542152-25.37
ADediting_755326chr19_41871542_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-887-5pchr1941871536418715438mer-1a4187152441871543143-15.14
ADediting_755327chr19_41871543_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-887-5pchr1941871536418715438mer-1a4187152441871543143-15.14
ADediting_755330chr19_41871558_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6500-3pchr1941871555418715617mer-m84187154241871562140-14.27
ADediting_755331chr19_41871559_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-216b-3pchr1941871557418715648mer-1a4187153941871564144-14.9
ADediting_755331chr19_41871559_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6500-3pchr1941871555418715617mer-m84187154241871562140-14.27
ADediting_755332chr19_41871565_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4284chr1941871561418715688mer-1a4187155141871568146-15.85
ADediting_755354chr19_41872620_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-1271-3pchr1941872618418726258mer-1a4187260441872625144-15.48
ADediting_755354chr19_41872620_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-550a-3-5pchr1941872618418726258mer-1a4187260741872625142-12.5
ADediting_755354chr19_41872620_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-550a-5pchr1941872618418726258mer-1a4187260441872625142-16.78
ADediting_755355chr19_41872624_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-1271-3pchr1941872618418726258mer-1a4187260441872625144-15.48
ADediting_755355chr19_41872624_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-550a-3-5pchr1941872618418726258mer-1a4187260741872625142-12.5
ADediting_755355chr19_41872624_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-550a-5pchr1941872618418726258mer-1a4187260441872625142-16.78
ADediting_755355chr19_41872624_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-550b-2-5pchr1941872619418726257mer-m84187260641872626147-14.54
ADediting_755355chr19_41872624_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6889-3pchr1941872620418726267mer-m84187260341872627150-19.8
ADediting_755356chr19_41872626_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4252chr1941872624418726307mer-m84187261341872631150-18.25
ADediting_755356chr19_41872626_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-550b-2-5pchr1941872619418726257mer-m84187260641872626147-14.54
ADediting_755356chr19_41872626_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6889-3pchr1941872620418726267mer-m84187260341872627150-19.8
ADediting_755357chr19_41872634_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6807-5pchr1941872627418726337mer-m84187261241872634152-25.67
ADediting_755358chr19_41872636_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-552-3pchr1941872634418726418mer-1a4187262141872641140-14.1
ADediting_755359chr19_41872642_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-10399-5pchr1941872637418726437mer-m84187262341872644148-10
ADediting_755359chr19_41872642_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6504-3pchr1941872637418726437mer-m84187262341872644149-15.11
ADediting_755360chr19_41872643_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-10399-5pchr1941872637418726437mer-m84187262341872644148-10
ADediting_755360chr19_41872643_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6504-3pchr1941872637418726437mer-m84187262341872644149-15.11
ADediting_755364chr19_41872665_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-340-3pchr1941872663418726697mer-m84187264941872670150-19.96
ADediting_755364chr19_41872665_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6827-3pchr1941872663418726697mer-m84187265141872670147-20.95
ADediting_755365chr19_41872748_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-3129-3pchr1941872744418727507mer-m84187273041872751142-4.24
ADediting_755365chr19_41872748_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4735-5pchr1941872742418727487mer-m84187272841872749140-5.64
ADediting_755365chr19_41872748_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4775chr1941872741418727477mer-m84187272641872748149-4.74
ADediting_755365chr19_41872748_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-5583-5pchr1941872744418727507mer-m84187273041872751147-4.54
ADediting_755366chr19_41872768_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-552-3pchr1941872766418727738mer-1a4187275441872773142-14.61
ADediting_755366chr19_41872768_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-764chr1941872765418727717mer-m84187274741872772152-26.77
ADediting_755367chr19_41872774_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-10399-5pchr1941872769418727757mer-m84187275541872776148-11.23
ADediting_755367chr19_41872774_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6504-3pchr1941872769418727757mer-m84187275541872776143-13.49
ADediting_755368chr19_41872775_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-10399-5pchr1941872769418727757mer-m84187275541872776148-11.23
ADediting_755368chr19_41872775_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-5089-5pchr1941872773418727797mer-m84187276241872780146-12.78
ADediting_755368chr19_41872775_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6504-3pchr1941872769418727757mer-m84187275541872776143-13.49
ADediting_755369chr19_41872780_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-5089-5pchr1941872773418727797mer-m84187276241872780146-12.78
ADediting_755369chr19_41872780_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6506-5pchr1941872774418727807mer-m84187275941872781144-13.45
ADediting_755370chr19_41872784_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6869-5pchr1941872781418727877mer-m84187276641872788146-17.48
ADediting_755371chr19_41872788_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-1200chr1941872784418727907mer-m84187277041872791141-17.86
ADediting_755371chr19_41872788_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6869-5pchr1941872781418727877mer-m84187276641872788146-17.48
ADediting_755372chr19_41872801_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-5001-3pchr1941872796418728038mer-1a4187278241872803153-23.55
ADediting_755373chr19_41872803_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4659a-3pchr1941872800418728067mer-m84187278841872807143-10.85
ADediting_755373chr19_41872803_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4659b-3pchr1941872800418728067mer-m84187278841872807143-12.05
ADediting_755373chr19_41872803_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-5001-3pchr1941872796418728038mer-1a4187278241872803153-23.55
ADediting_755374chr19_41872804_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4659a-3pchr1941872800418728067mer-m84187278841872807143-10.85
ADediting_755374chr19_41872804_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4659b-3pchr1941872800418728067mer-m84187278841872807143-12.05
ADediting_755375chr19_41872807_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4659a-3pchr1941872800418728067mer-m84187278841872807143-10.85
ADediting_755375chr19_41872807_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4659b-3pchr1941872800418728067mer-m84187278841872807143-12.05
ADediting_755378chr19_41872836_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-324-3pchr1941872833418728397mer-m84187281841872840145-29.21
ADediting_755382chr19_41872854_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-302fchr1941872850418728567mer-m84187284241872857145-8.05
ADediting_755383chr19_41872855_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-302fchr1941872850418728567mer-m84187284241872857145-8.05
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-378jchr1941872859418728657mer-m84187284841872866140-10.52
ADediting_755384chr19_41872861_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-6839-5pchr1941872859418728657mer-m84187284341872866150-15.77

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1337757chr7_5495852_-ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-589-3pchr1941871446418714527mer-m84187143041871453146-15.23

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_843620chr2_207754818_+ENSG00000105372.8ENST00000598742.6RPS19-206hsa-miR-4775chr1941872741418727477mer-m84187272641872748149-4.74

check button Differentially expressed gene-miRNA network
Differentially expressed mRNA-miRNA network
boxplot

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The effects of the RNA editing to the stability of the RNA structures for RPS19

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000598742.6protein_codingSoverviewSoverview

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
ADediting_755316ENST00000598742.6chr19_41871472_+568-891.80-892.60-924.20
ADediting_755317ENST00000598742.6chr19_41871481_+577-892.40-892.60-924.20
ADediting_755318ENST00000598742.6chr19_41871486_+582-891.80-892.60-924.20
ADediting_755319ENST00000598742.6chr19_41871496_+592-892.30-892.60-924.20
ADediting_755320ENST00000598742.6chr19_41871497_+593-889.60-892.60-924.20
ADediting_755322ENST00000598742.6chr19_41871516_+612-898.20-892.60-924.20
ADediting_755323ENST00000598742.6chr19_41871517_+613-894.40-892.60-924.20
ADediting_755324ENST00000598742.6chr19_41871518_+614-898.70-892.60-924.20
ADediting_755325ENST00000598742.6chr19_41871534_+630-894.80-892.60-924.20
ADediting_755326ENST00000598742.6chr19_41871542_+638-892.30-892.60-924.20
ADediting_755327ENST00000598742.6chr19_41871543_+639-892.70-892.60-924.20
ADediting_755328ENST00000598742.6chr19_41871544_+640-892.30-892.60-924.20
ADediting_755329ENST00000598742.6chr19_41871556_+652-892.60-892.60-924.20
ADediting_755330ENST00000598742.6chr19_41871558_+654-891.90-892.60-924.20
ADediting_755331ENST00000598742.6chr19_41871559_+655-899.20-892.60-924.20
ADediting_755332ENST00000598742.6chr19_41871565_+661-891.70-892.60-924.20
ADediting_755354ENST00000598742.6chr19_41872620_+1716-891.90-892.60-924.20
ADediting_755355ENST00000598742.6chr19_41872624_+1720-892.20-892.60-924.20
ADediting_755356ENST00000598742.6chr19_41872626_+1722-891.90-892.60-924.20
ADediting_755357ENST00000598742.6chr19_41872634_+1730-892.20-892.60-924.20
ADediting_755358ENST00000598742.6chr19_41872636_+1732-892.20-892.60-924.20
ADediting_755359ENST00000598742.6chr19_41872642_+1738-892.70-892.60-924.20
ADediting_755360ENST00000598742.6chr19_41872643_+1739-892.60-892.60-924.20
ADediting_755361ENST00000598742.6chr19_41872648_+1744-891.90-892.60-924.20
ADediting_755362ENST00000598742.6chr19_41872649_+1745-899.30-892.60-924.20
ADediting_755364ENST00000598742.6chr19_41872665_+1761-892.60-892.60-924.20
ADediting_755365ENST00000598742.6chr19_41872748_+1844-895.70-892.60-924.20
ADediting_755366ENST00000598742.6chr19_41872768_+1864-892.20-892.60-924.20
ADediting_755367ENST00000598742.6chr19_41872774_+1870-894.10-892.60-924.20
ADediting_755368ENST00000598742.6chr19_41872775_+1871-892.80-892.60-924.20
ADediting_755369ENST00000598742.6chr19_41872780_+1876-891.80-892.60-924.20
ADediting_755370ENST00000598742.6chr19_41872784_+1880-892.10-892.60-924.20
ADediting_755371ENST00000598742.6chr19_41872788_+1884-891.90-892.60-924.20
ADediting_755372ENST00000598742.6chr19_41872801_+1897-891.90-892.60-924.20
ADediting_755373ENST00000598742.6chr19_41872803_+1899-899.50-892.60-924.20
ADediting_755374ENST00000598742.6chr19_41872804_+1900-892.60-892.60-924.20
ADediting_755375ENST00000598742.6chr19_41872807_+1903-892.60-892.60-924.20
ADediting_755376ENST00000598742.6chr19_41872815_+1911-892.10-892.60-924.20
ADediting_755377ENST00000598742.6chr19_41872816_+1912-892.60-892.60-924.20
ADediting_755378ENST00000598742.6chr19_41872836_+1932-891.90-892.60-924.20
ADediting_755379ENST00000598742.6chr19_41872845_+1941-891.70-892.60-924.20
ADediting_755380ENST00000598742.6chr19_41872847_+1943-892.00-892.60-924.20
ADediting_755381ENST00000598742.6chr19_41872851_+1947-894.80-892.60-924.20
ADediting_755382ENST00000598742.6chr19_41872854_+1950-895.20-892.60-924.20
ADediting_755383ENST00000598742.6chr19_41872855_+1951-891.10-892.60-924.20
ADediting_755384ENST00000598742.6chr19_41872861_+1957-895.20-892.60-924.20

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for RPS19

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFCADediting_755217chr19_41863896_+0.01803885595341060.1342465240752090.8139911697316-0.01341662255813282.26796415461137e-210.503951414204578
DLPFCADediting_755221chr19_41863955_+0.01431331641665890.1389966325911770.4489193704387330.0431613986316023.7298885969651e-120.381115025733316
DLPFCADediting_755272chr19_41867512_+0.3242631788019870.0561686824140930.195796519172453-0.07367044579870745.21404432537422e-200.488643713301618
CERADediting_755298chr19_41870943_+0.02455965314875760.1835426673703529.4714762466145e-060.3528682030078740.3027847534416540.0846955668424701
CERADediting_755306chr19_41871035_+0.363926149013540.07465147377249613.44203224151334e-050.3313643548623950.112697133921530.130048829856317
CERADediting_755320chr19_41871497_+8.01709708910574e-050.3163534172490854.69950858538596e-080.4279334161293450.002843394051816590.242048303504966

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC7.46786997908258e-070.2766836884171195.06318061250498e-050.2280582483803341.36041669898888e-230.52738679178511
AC1.08875540699003e-360.6900940867136831.42529264236956e-260.6071429321496353.42623637771866e-220.561722769189776
TCX0.0273577383814564-0.1801800212694974.11530587793908e-09-0.4570682260491263.85988868693991e-080.430392504070379
FP1.02011934900088e-110.4814838820558692.5870706109492e-120.4934654128714690.03076821928551430.161973654606495
IFG0.0219590033787240.4560166764849030.05784350302041310.3843341367681230.1299410036195430.311221051874387
STG0.001383030738607630.3434173119819430.04121037922223270.2232612021568930.3264992603312920.108364611023407

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Relation with AD stages for RPS19

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.
IFGADediting_755360chr19_41872643_+0.03547133699799280.422303326441651
IFGADediting_755374chr19_41872804_+0.04897706951583-0.397704204776515

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.

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RelatedDrugs for RPS19

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for RPS19

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource
RPS19C2676137Diamond-Blackfan Anemia 18UNIPROT
RPS19C0010828Cytopenia4GENOMICS_ENGLAND
RPS19C0158995Congenital anemia4GENOMICS_ENGLAND
RPS19C4025414Radial club hand3GENOMICS_ENGLAND
RPS19C0024623Malignant neoplasm of stomach1CTD_human
RPS19C0033578Prostatic Neoplasms1CTD_human
RPS19C0038356Stomach Neoplasms1CTD_human
RPS19C0235874Disease Exacerbation1CTD_human
RPS19C0376358Malignant neoplasm of prostate1CTD_human
RPS19C0376545Hematologic Neoplasms1GENOMICS_ENGLAND
RPS19C1708349Hereditary Diffuse Gastric Cancer1CTD_human