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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for RPL27A |
 Gene summary |
| Gene information | Gene symbol | RPL27A | Gene ID | 6157 |
| Gene name | ribosomal protein L27a | |
| Synonyms | L27A | |
| Cytomap | 11p15.4 | |
| Type of gene | protein-coding | |
| Description | 60S ribosomal protein L27alarge ribosomal subunit protein uL15 | |
| Modification date | 20200327 | |
| UniProtAcc | P46776, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for RPL27A |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_289062(8686275, +), ADediting_289063(8686287, +), ADediting_289064(8686293, +), ADediting_289065(8686296, +), ADediting_289066(8686306, +), ADediting_289067(8686311, +), ADediting_289068(8686325, +), ADediting_289069(8686348, +), ADediting_289070(8686360, +), ADediting_289071(8686361, +), ADediting_289072(8686370, +), ADediting_289073(8686372, +), ADediting_289074(8686383, +), ADediting_289075(8686392, +), ADediting_289076(8686396, +), ADediting_289077(8686397, +), ADediting_289078(8686405, +), ADediting_289079(8686411, +), ADediting_289080(8686414, +), ADediting_289081(8686505, +), ADediting_289082(8687204, +), ADediting_289083(8687210, +), ADediting_289084(8687213, +), ADediting_289085(8687214, +), ADediting_289086(8687223, +), ADediting_289087(8687224, +), ADediting_289088(8687235, +), ADediting_289089(8687238, +), ADediting_289090(8687239, +), ADediting_289091(8687240, +), ADediting_289092(8687242, +), ADediting_289093(8687244, +), ADediting_289094(8687247, +), ADediting_289095(8687248, +), ADediting_289096(8687249, +), ADediting_289097(8687252, +), ADediting_289098(8687256, +), ADediting_289099(8687278, +), ADediting_289100(8687279, +), ADediting_289101(8687284, +), ADediting_289102(8687288, +), ADediting_289103(8687295, +), ADediting_289104(8687301, +), ADediting_289105(8687305, +), ADediting_289106(8687317, +), ADediting_289107(8687320, +), ADediting_289108(8687337, +), ADediting_289109(8687342, +), ADediting_289110(8687344, +), ADediting_289111(8687352, +), ADediting_289112(8687679, +), ADediting_289113(8687693, +), ADediting_289114(8687698, +), ADediting_289115(8687746, +), ADediting_289116(8687755, +), ADediting_289117(8687758, +), ADediting_289118(8687768, +), ADediting_289119(8687795, +), ADediting_289120(8687810, +), ADediting_289121(8687813, +), ADediting_289122(8687835, +), ADediting_289123(8687881, +), |
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RNA editing positional annotations for RPL27A using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_289062 | chr11_8686275_+ | UTR3 |
| ADediting_289063 | chr11_8686287_+ | UTR3 |
| ADediting_289064 | chr11_8686293_+ | UTR3 |
| ADediting_289065 | chr11_8686296_+ | UTR3 |
| ADediting_289066 | chr11_8686306_+ | UTR3 |
| ADediting_289067 | chr11_8686311_+ | UTR3 |
| ADediting_289068 | chr11_8686325_+ | UTR3 |
| ADediting_289069 | chr11_8686348_+ | UTR3 |
| ADediting_289070 | chr11_8686360_+ | UTR3 |
| ADediting_289071 | chr11_8686361_+ | UTR3 |
| ADediting_289072 | chr11_8686370_+ | UTR3 |
| ADediting_289073 | chr11_8686372_+ | UTR3 |
| ADediting_289074 | chr11_8686383_+ | UTR3 |
| ADediting_289075 | chr11_8686392_+ | UTR3 |
| ADediting_289076 | chr11_8686396_+ | UTR3 |
| ADediting_289077 | chr11_8686397_+ | UTR3 |
| ADediting_289078 | chr11_8686405_+ | UTR3 |
| ADediting_289079 | chr11_8686411_+ | UTR3 |
| ADediting_289080 | chr11_8686414_+ | UTR3 |
| ADediting_289081 | chr11_8686505_+ | UTR3 |
| ADediting_289082 | chr11_8687204_+ | UTR3 |
| ADediting_289083 | chr11_8687210_+ | UTR3 |
| ADediting_289084 | chr11_8687213_+ | UTR3 |
| ADediting_289085 | chr11_8687214_+ | UTR3 |
| ADediting_289086 | chr11_8687223_+ | UTR3 |
| ADediting_289087 | chr11_8687224_+ | UTR3 |
| ADediting_289088 | chr11_8687235_+ | UTR3 |
| ADediting_289089 | chr11_8687238_+ | UTR3 |
| ADediting_289090 | chr11_8687239_+ | UTR3 |
| ADediting_289091 | chr11_8687240_+ | UTR3 |
| ADediting_289092 | chr11_8687242_+ | UTR3 |
| ADediting_289093 | chr11_8687244_+ | UTR3 |
| ADediting_289094 | chr11_8687247_+ | UTR3 |
| ADediting_289095 | chr11_8687248_+ | UTR3 |
| ADediting_289096 | chr11_8687249_+ | UTR3 |
| ADediting_289097 | chr11_8687252_+ | UTR3 |
| ADediting_289098 | chr11_8687256_+ | UTR3 |
| ADediting_289099 | chr11_8687278_+ | UTR3 |
| ADediting_289100 | chr11_8687279_+ | UTR3 |
| ADediting_289101 | chr11_8687284_+ | UTR3 |
| ADediting_289102 | chr11_8687288_+ | UTR3 |
| ADediting_289103 | chr11_8687295_+ | UTR3 |
| ADediting_289104 | chr11_8687301_+ | UTR3 |
| ADediting_289105 | chr11_8687305_+ | UTR3 |
| ADediting_289106 | chr11_8687317_+ | UTR3 |
| ADediting_289107 | chr11_8687320_+ | UTR3 |
| ADediting_289108 | chr11_8687337_+ | UTR3 |
| ADediting_289109 | chr11_8687342_+ | UTR3 |
| ADediting_289110 | chr11_8687344_+ | UTR3 |
| ADediting_289111 | chr11_8687352_+ | UTR3 |
| ADediting_289112 | chr11_8687679_+ | UTR3 |
| ADediting_289113 | chr11_8687693_+ | UTR3 |
| ADediting_289114 | chr11_8687698_+ | UTR3 |
| ADediting_289115 | chr11_8687746_+ | UTR3 |
| ADediting_289116 | chr11_8687755_+ | UTR3 |
| ADediting_289117 | chr11_8687758_+ | UTR3 |
| ADediting_289118 | chr11_8687768_+ | UTR3 |
| ADediting_289119 | chr11_8687795_+ | UTR3 |
| ADediting_289120 | chr11_8687810_+ | UTR3 |
| ADediting_289121 | chr11_8687813_+ | UTR3 |
| ADediting_289122 | chr11_8687835_+ | UTR3 |
| ADediting_289123 | chr11_8687881_+ | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_289062 | chr11_8686275_+ | SINE | Alu | Name=AluSq |
| ADediting_289063 | chr11_8686287_+ | SINE | Alu | Name=AluSq |
| ADediting_289064 | chr11_8686293_+ | SINE | Alu | Name=AluSq |
| ADediting_289065 | chr11_8686296_+ | SINE | Alu | Name=AluSq |
| ADediting_289066 | chr11_8686306_+ | SINE | Alu | Name=AluSq |
| ADediting_289067 | chr11_8686311_+ | SINE | Alu | Name=AluSq |
| ADediting_289068 | chr11_8686325_+ | SINE | Alu | Name=AluSq |
| ADediting_289069 | chr11_8686348_+ | SINE | Alu | Name=AluSq |
| ADediting_289070 | chr11_8686360_+ | SINE | Alu | Name=AluSq |
| ADediting_289071 | chr11_8686361_+ | SINE | Alu | Name=AluSq |
| ADediting_289072 | chr11_8686370_+ | SINE | Alu | Name=AluSq |
| ADediting_289073 | chr11_8686372_+ | SINE | Alu | Name=AluSq |
| ADediting_289074 | chr11_8686383_+ | SINE | Alu | Name=AluSq |
| ADediting_289075 | chr11_8686392_+ | SINE | Alu | Name=AluSq |
| ADediting_289076 | chr11_8686396_+ | SINE | Alu | Name=AluSq |
| ADediting_289077 | chr11_8686397_+ | SINE | Alu | Name=AluSq |
| ADediting_289078 | chr11_8686405_+ | SINE | Alu | Name=AluSq |
| ADediting_289079 | chr11_8686411_+ | SINE | Alu | Name=AluSq |
| ADediting_289080 | chr11_8686414_+ | SINE | Alu | Name=AluSq |
| ADediting_289081 | chr11_8686505_+ | SINE | Alu | Name=AluSq |
| ADediting_289082 | chr11_8687204_+ | SINE | Alu | Name=AluSp |
| ADediting_289083 | chr11_8687210_+ | SINE | Alu | Name=AluSp |
| ADediting_289084 | chr11_8687213_+ | SINE | Alu | Name=AluSp |
| ADediting_289085 | chr11_8687214_+ | SINE | Alu | Name=AluSp |
| ADediting_289086 | chr11_8687223_+ | SINE | Alu | Name=AluSp |
| ADediting_289087 | chr11_8687224_+ | SINE | Alu | Name=AluSp |
| ADediting_289088 | chr11_8687235_+ | SINE | Alu | Name=AluSp |
| ADediting_289089 | chr11_8687238_+ | SINE | Alu | Name=AluSp |
| ADediting_289090 | chr11_8687239_+ | SINE | Alu | Name=AluSp |
| ADediting_289091 | chr11_8687240_+ | SINE | Alu | Name=AluSp |
| ADediting_289092 | chr11_8687242_+ | SINE | Alu | Name=AluSp |
| ADediting_289093 | chr11_8687244_+ | SINE | Alu | Name=AluSp |
| ADediting_289094 | chr11_8687247_+ | SINE | Alu | Name=AluSp |
| ADediting_289095 | chr11_8687248_+ | SINE | Alu | Name=AluSp |
| ADediting_289096 | chr11_8687249_+ | SINE | Alu | Name=AluSp |
| ADediting_289097 | chr11_8687252_+ | SINE | Alu | Name=AluSp |
| ADediting_289098 | chr11_8687256_+ | SINE | Alu | Name=AluSp |
| ADediting_289099 | chr11_8687278_+ | SINE | Alu | Name=AluSp |
| ADediting_289100 | chr11_8687279_+ | SINE | Alu | Name=AluSp |
| ADediting_289101 | chr11_8687284_+ | SINE | Alu | Name=AluSp |
| ADediting_289102 | chr11_8687288_+ | SINE | Alu | Name=AluSp |
| ADediting_289103 | chr11_8687295_+ | SINE | Alu | Name=AluSp |
| ADediting_289104 | chr11_8687301_+ | SINE | Alu | Name=AluSp |
| ADediting_289105 | chr11_8687305_+ | SINE | Alu | Name=AluSp |
| ADediting_289106 | chr11_8687317_+ | SINE | Alu | Name=AluSp |
| ADediting_289107 | chr11_8687320_+ | SINE | Alu | Name=AluSp |
| ADediting_289108 | chr11_8687337_+ | SINE | Alu | Name=AluSp |
| ADediting_289109 | chr11_8687342_+ | SINE | Alu | Name=AluSp |
| ADediting_289110 | chr11_8687344_+ | SINE | Alu | Name=AluSp |
| ADediting_289111 | chr11_8687352_+ | SINE | Alu | Name=AluSp |
| ADediting_289112 | chr11_8687679_+ | SINE | Alu | Name=AluY |
| ADediting_289113 | chr11_8687693_+ | SINE | Alu | Name=AluY |
| ADediting_289114 | chr11_8687698_+ | SINE | Alu | Name=AluY |
| ADediting_289115 | chr11_8687746_+ | SINE | Alu | Name=AluY |
| ADediting_289116 | chr11_8687755_+ | SINE | Alu | Name=AluY |
| ADediting_289117 | chr11_8687758_+ | SINE | Alu | Name=AluY |
| ADediting_289118 | chr11_8687768_+ | SINE | Alu | Name=AluY |
| ADediting_289119 | chr11_8687795_+ | SINE | Alu | Name=AluY |
| ADediting_289120 | chr11_8687810_+ | SINE | Alu | Name=AluY |
| ADediting_289121 | chr11_8687813_+ | SINE | Alu | Name=AluY |
| ADediting_289122 | chr11_8687835_+ | SINE | Alu | Name=AluY |
| ADediting_289123 | chr11_8687881_+ | SINE | Alu | Name=AluY |
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RNA A-to-I editing events in the alternative splicing sites for RPL27A |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RPL27A |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for RPL27A |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for RPL27A |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_289062 | chr11_8686275_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-3940-3p | chr11 | 8686272 | 8686278 | 7mer-m8 | 8686258 | 8686279 | 140 | -21.52 |
| ADediting_289068 | chr11_8686325_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-1247-3p | chr11 | 8686320 | 8686326 | 7mer-m8 | 8686305 | 8686327 | 160 | -28.73 |
| ADediting_289071 | chr11_8686361_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-8086 | chr11 | 8686355 | 8686361 | 7mer-m8 | 8686339 | 8686362 | 159 | -21.3 |
| ADediting_289074 | chr11_8686383_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6786-5p | chr11 | 8686376 | 8686382 | 7mer-m8 | 8686362 | 8686383 | 148 | -25.3 |
| ADediting_289076 | chr11_8686396_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-1207-3p | chr11 | 8686389 | 8686396 | 8mer-1a | 8686379 | 8686396 | 144 | -14.68 |
| ADediting_289076 | chr11_8686396_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-34a-3p | chr11 | 8686392 | 8686398 | 7mer-m8 | 8686377 | 8686399 | 145 | -10.17 |
| ADediting_289077 | chr11_8686397_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4661-5p | chr11 | 8686391 | 8686397 | 7mer-m8 | 8686379 | 8686398 | 145 | -14.65 |
| ADediting_289077 | chr11_8686397_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548ae-3p | chr11 | 8686395 | 8686401 | 7mer-m8 | 8686382 | 8686402 | 141 | -10.48 |
| ADediting_289077 | chr11_8686397_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548ah-3p | chr11 | 8686395 | 8686401 | 7mer-m8 | 8686380 | 8686402 | 143 | -10.48 |
| ADediting_289077 | chr11_8686397_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548aj-3p | chr11 | 8686395 | 8686401 | 7mer-m8 | 8686382 | 8686402 | 141 | -8.37 |
| ADediting_289077 | chr11_8686397_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548am-3p | chr11 | 8686395 | 8686401 | 7mer-m8 | 8686380 | 8686402 | 143 | -10.48 |
| ADediting_289077 | chr11_8686397_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548aq-3p | chr11 | 8686395 | 8686401 | 7mer-m8 | 8686381 | 8686402 | 141 | -10.48 |
| ADediting_289077 | chr11_8686397_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548j-3p | chr11 | 8686395 | 8686401 | 7mer-m8 | 8686382 | 8686402 | 141 | -10.48 |
| ADediting_289077 | chr11_8686397_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548x-3p | chr11 | 8686395 | 8686401 | 7mer-m8 | 8686383 | 8686402 | 141 | -8.37 |
| ADediting_289077 | chr11_8686397_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-7844-5p | chr11 | 8686393 | 8686399 | 7mer-m8 | 8686379 | 8686400 | 160 | -18.3 |
| ADediting_289078 | chr11_8686405_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-570-3p | chr11 | 8686403 | 8686410 | 8mer-1a | 8686387 | 8686410 | 157 | -9.51 |
| ADediting_289080 | chr11_8686414_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-181a-2-3p | chr11 | 8686408 | 8686415 | 8mer-1a | 8686394 | 8686415 | 140 | -11.24 |
| ADediting_289080 | chr11_8686414_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6509-3p | chr11 | 8686409 | 8686415 | 7mer-m8 | 8686395 | 8686416 | 155 | -13.8 |
| ADediting_289083 | chr11_8687210_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4435 | chr11 | 8687206 | 8687213 | 8mer-1a | 8687193 | 8687213 | 146 | -20.02 |
| ADediting_289083 | chr11_8687210_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4755-3p | chr11 | 8687204 | 8687210 | 7mer-m8 | 8687187 | 8687211 | 156 | -24.25 |
| ADediting_289085 | chr11_8687214_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6131 | chr11 | 8687208 | 8687214 | 7mer-m8 | 8687197 | 8687215 | 155 | -25.82 |
| ADediting_289086 | chr11_8687223_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6895-3p | chr11 | 8687218 | 8687224 | 7mer-m8 | 8687204 | 8687225 | 150 | -15.95 |
| ADediting_289087 | chr11_8687224_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6815-3p | chr11 | 8687219 | 8687225 | 7mer-m8 | 8687206 | 8687226 | 148 | -16.18 |
| ADediting_289088 | chr11_8687235_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-374b-3p | chr11 | 8687232 | 8687239 | 8mer-1a | 8687218 | 8687239 | 141 | -8.66 |
| ADediting_289089 | chr11_8687238_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-222-5p | chr11 | 8687232 | 8687239 | 8mer-1a | 8687216 | 8687239 | 143 | -15.58 |
| ADediting_289089 | chr11_8687238_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-936 | chr11 | 8687231 | 8687238 | 8mer-1a | 8687216 | 8687238 | 159 | -20.42 |
| ADediting_289090 | chr11_8687239_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-325 | chr11 | 8687232 | 8687239 | 8mer-1a | 8687218 | 8687239 | 146 | -11.99 |
| ADediting_289094 | chr11_8687247_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4778-5p | chr11 | 8687243 | 8687249 | 7mer-m8 | 8687229 | 8687250 | 152 | -14.73 |
| ADediting_289095 | chr11_8687248_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-581 | chr11 | 8687241 | 8687248 | 8mer-1a | 8687226 | 8687248 | 146 | -14.46 |
| ADediting_289097 | chr11_8687252_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-3190-5p | chr11 | 8687250 | 8687256 | 7mer-m8 | 8687238 | 8687257 | 147 | -16.24 |
| ADediting_289097 | chr11_8687252_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548s | chr11 | 8687249 | 8687255 | 7mer-m8 | 8687236 | 8687256 | 145 | -11.39 |
| ADediting_289099 | chr11_8687278_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-513a-5p | chr11 | 8687272 | 8687278 | 7mer-m8 | 8687262 | 8687279 | 160 | -21.48 |
| ADediting_289099 | chr11_8687278_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-638 | chr11 | 8687277 | 8687283 | 7mer-1a | 8687259 | 8687283 | 163 | -35.62 |
| ADediting_289100 | chr11_8687279_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-8052 | chr11 | 8687277 | 8687283 | 7mer-1a | 8687265 | 8687283 | 143 | -23.77 |
| ADediting_289102 | chr11_8687288_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-1207-3p | chr11 | 8687281 | 8687287 | 7mer-m8 | 8687271 | 8687288 | 140 | -12.56 |
| ADediting_289102 | chr11_8687288_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-330-3p | chr11 | 8687286 | 8687292 | 7mer-m8 | 8687270 | 8687293 | 155 | -16.76 |
| ADediting_289102 | chr11_8687288_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-646 | chr11 | 8687283 | 8687289 | 7mer-m8 | 8687272 | 8687290 | 145 | -16.24 |
| ADediting_289103 | chr11_8687295_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-186-3p | chr11 | 8687288 | 8687294 | 7mer-m8 | 8687274 | 8687295 | 140 | -19.83 |
| ADediting_289103 | chr11_8687295_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-3943 | chr11 | 8687292 | 8687298 | 7mer-m8 | 8687279 | 8687299 | 154 | -24.4 |
| ADediting_289104 | chr11_8687301_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6849-3p | chr11 | 8687294 | 8687300 | 7mer-m8 | 8687280 | 8687301 | 140 | -15.94 |
| ADediting_289106 | chr11_8687317_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-10398-3p | chr11 | 8687312 | 8687319 | 8mer-1a | 8687299 | 8687319 | 145 | -24.92 |
| ADediting_289107 | chr11_8687320_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-331-3p | chr11 | 8687314 | 8687320 | 7mer-m8 | 8687300 | 8687321 | 154 | -23.57 |
| ADediting_289107 | chr11_8687320_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4313 | chr11 | 8687316 | 8687322 | 7mer-m8 | 8687304 | 8687323 | 150 | -22.91 |
| ADediting_289108 | chr11_8687337_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6075 | chr11 | 8687334 | 8687341 | 8mer-1a | 8687320 | 8687341 | 154 | -25.73 |
| ADediting_289110 | chr11_8687344_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6790-3p | chr11 | 8687339 | 8687345 | 7mer-m8 | 8687326 | 8687346 | 150 | -25.87 |
| ADediting_289114 | chr11_8687698_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4454 | chr11 | 8687695 | 8687702 | 8mer-1a | 8687682 | 8687702 | 161 | -26.62 |
| ADediting_289116 | chr11_8687755_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-204-3p | chr11 | 8687748 | 8687754 | 7mer-m8 | 8687736 | 8687755 | 152 | -18.77 |
| ADediting_289116 | chr11_8687755_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4646-5p | chr11 | 8687748 | 8687754 | 7mer-m8 | 8687735 | 8687755 | 158 | -25.98 |
| ADediting_289117 | chr11_8687758_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-3614-5p | chr11 | 8687751 | 8687757 | 7mer-m8 | 8687735 | 8687758 | 157 | -25.27 |
| ADediting_289117 | chr11_8687758_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4691-3p | chr11 | 8687755 | 8687761 | 7mer-m8 | 8687735 | 8687762 | 150 | -26.36 |
| ADediting_289118 | chr11_8687768_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-17-3p | chr11 | 8687764 | 8687770 | 7mer-m8 | 8687749 | 8687771 | 158 | -20.42 |
| ADediting_289119 | chr11_8687795_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548ae-3p | chr11 | 8687793 | 8687799 | 7mer-m8 | 8687780 | 8687800 | 141 | -6.32 |
| ADediting_289119 | chr11_8687795_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548ah-3p | chr11 | 8687793 | 8687799 | 7mer-m8 | 8687778 | 8687800 | 143 | -8.1 |
| ADediting_289119 | chr11_8687795_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548aj-3p | chr11 | 8687793 | 8687799 | 7mer-m8 | 8687780 | 8687800 | 141 | -7.22 |
| ADediting_289119 | chr11_8687795_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548am-3p | chr11 | 8687793 | 8687799 | 7mer-m8 | 8687778 | 8687800 | 143 | -8.1 |
| ADediting_289119 | chr11_8687795_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548aq-3p | chr11 | 8687793 | 8687799 | 7mer-m8 | 8687779 | 8687800 | 141 | -6.7 |
| ADediting_289119 | chr11_8687795_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548j-3p | chr11 | 8687793 | 8687799 | 7mer-m8 | 8687780 | 8687800 | 141 | -6.34 |
| ADediting_289119 | chr11_8687795_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548x-3p | chr11 | 8687793 | 8687799 | 7mer-m8 | 8687781 | 8687800 | 141 | -7.13 |
| ADediting_289119 | chr11_8687795_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-7844-5p | chr11 | 8687791 | 8687797 | 7mer-m8 | 8687777 | 8687798 | 156 | -17.36 |
| ADediting_289122 | chr11_8687835_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-3190-5p | chr11 | 8687833 | 8687839 | 7mer-m8 | 8687822 | 8687840 | 152 | -22.63 |
| ADediting_289122 | chr11_8687835_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-548s | chr11 | 8687832 | 8687838 | 7mer-m8 | 8687815 | 8687839 | 151 | -15.32 |
| ADediting_289123 | chr11_8687881_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-326 | chr11 | 8687876 | 8687882 | 7mer-m8 | 8687864 | 8687883 | 140 | -13.25 |
| ADediting_289123 | chr11_8687881_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-330-5p | chr11 | 8687876 | 8687882 | 7mer-m8 | 8687860 | 8687883 | 143 | -20.01 |
| ADediting_289123 | chr11_8687881_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4314 | chr11 | 8687875 | 8687881 | 7mer-m8 | 8687864 | 8687882 | 143 | -20.84 |
| ADediting_289123 | chr11_8687881_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-514a-5p | chr11 | 8687877 | 8687883 | 7mer-m8 | 8687861 | 8687884 | 150 | -18.62 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_289062 | chr11_8686275_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-221-5p | chr11 | 8686270 | 8686276 | 7mer-m8 | 8686256 | 8686277 | 140 | -16.73 |
| ADediting_289063 | chr11_8686287_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-324-3p | chr11 | 8686284 | 8686290 | 7mer-m8 | 8686269 | 8686291 | 148 | -24.95 |
| ADediting_289063 | chr11_8686287_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4252 | chr11 | 8686285 | 8686292 | 8mer-1a | 8686272 | 8686292 | 149 | -22.82 |
| ADediting_289064 | chr11_8686293_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-1227-3p | chr11 | 8686287 | 8686293 | 7mer-m8 | 8686275 | 8686294 | 148 | -22.88 |
| ADediting_289067 | chr11_8686311_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-17-3p | chr11 | 8686305 | 8686311 | 7mer-m8 | 8686291 | 8686312 | 150 | -17.84 |
| ADediting_289067 | chr11_8686311_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-485-5p | chr11 | 8686309 | 8686315 | 7mer-m8 | 8686296 | 8686316 | 153 | -19.07 |
| ADediting_289067 | chr11_8686311_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6884-5p | chr11 | 8686309 | 8686315 | 7mer-m8 | 8686293 | 8686316 | 150 | -23.9 |
| ADediting_289068 | chr11_8686325_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-3689a-3p | chr11 | 8686318 | 8686324 | 7mer-m8 | 8686302 | 8686325 | 147 | -25.82 |
| ADediting_289068 | chr11_8686325_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-3689b-3p | chr11 | 8686318 | 8686324 | 7mer-m8 | 8686305 | 8686325 | 154 | -29.42 |
| ADediting_289068 | chr11_8686325_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-3689c | chr11 | 8686318 | 8686324 | 7mer-m8 | 8686305 | 8686325 | 154 | -29.42 |
| ADediting_289068 | chr11_8686325_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-490-3p | chr11 | 8686322 | 8686329 | 8mer-1a | 8686307 | 8686329 | 146 | -21.23 |
| ADediting_289068 | chr11_8686325_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6779-5p | chr11 | 8686318 | 8686324 | 7mer-m8 | 8686305 | 8686325 | 148 | -26.34 |
| ADediting_289068 | chr11_8686325_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6780a-5p | chr11 | 8686318 | 8686324 | 7mer-m8 | 8686301 | 8686325 | 155 | -25.67 |
| ADediting_289069 | chr11_8686348_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4649-3p | chr11 | 8686342 | 8686348 | 7mer-m8 | 8686329 | 8686349 | 140 | -14.11 |
| ADediting_289069 | chr11_8686348_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-7160-5p | chr11 | 8686343 | 8686349 | 7mer-m8 | 8686330 | 8686350 | 146 | -20.9 |
| ADediting_289073 | chr11_8686372_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6720-3p | chr11 | 8686370 | 8686376 | 7mer-m8 | 8686356 | 8686377 | 148 | -21.26 |
| ADediting_289075 | chr11_8686392_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-1285-3p | chr11 | 8686386 | 8686392 | 7mer-m8 | 8686372 | 8686393 | 142 | -17.35 |
| ADediting_289075 | chr11_8686392_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-5189-5p | chr11 | 8686386 | 8686392 | 7mer-m8 | 8686372 | 8686393 | 153 | -23.07 |
| ADediting_289080 | chr11_8686414_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-3675-3p | chr11 | 8686412 | 8686418 | 7mer-m8 | 8686398 | 8686419 | 149 | -15.24 |
| ADediting_289082 | chr11_8687204_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-3663-5p | chr11 | 8687198 | 8687204 | 7mer-m8 | 8687185 | 8687205 | 154 | -24.76 |
| ADediting_289082 | chr11_8687204_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6131 | chr11 | 8687199 | 8687205 | 7mer-m8 | 8687190 | 8687206 | 150 | -24.03 |
| ADediting_289088 | chr11_8687235_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6832-5p | chr11 | 8687229 | 8687235 | 7mer-m8 | 8687216 | 8687236 | 146 | -15.93 |
| ADediting_289091 | chr11_8687240_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-223-5p | chr11 | 8687238 | 8687245 | 8mer-1a | 8687223 | 8687245 | 155 | -13.67 |
| ADediting_289092 | chr11_8687242_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-223-5p | chr11 | 8687238 | 8687245 | 8mer-1a | 8687223 | 8687245 | 155 | -13.67 |
| ADediting_289093 | chr11_8687244_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-223-5p | chr11 | 8687238 | 8687245 | 8mer-1a | 8687223 | 8687245 | 155 | -13.67 |
| ADediting_289093 | chr11_8687244_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-5010-3p | chr11 | 8687241 | 8687248 | 8mer-1a | 8687227 | 8687248 | 142 | -7.7 |
| ADediting_289094 | chr11_8687247_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-5010-3p | chr11 | 8687241 | 8687248 | 8mer-1a | 8687227 | 8687248 | 142 | -7.7 |
| ADediting_289095 | chr11_8687248_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4735-5p | chr11 | 8687246 | 8687252 | 7mer-m8 | 8687232 | 8687253 | 140 | -5.13 |
| ADediting_289095 | chr11_8687248_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-5010-3p | chr11 | 8687241 | 8687248 | 8mer-1a | 8687227 | 8687248 | 142 | -7.7 |
| ADediting_289096 | chr11_8687249_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4735-5p | chr11 | 8687246 | 8687252 | 7mer-m8 | 8687232 | 8687253 | 140 | -5.13 |
| ADediting_289097 | chr11_8687252_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4735-5p | chr11 | 8687246 | 8687252 | 7mer-m8 | 8687232 | 8687253 | 140 | -5.13 |
| ADediting_289097 | chr11_8687252_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4794 | chr11 | 8687250 | 8687256 | 7mer-m8 | 8687236 | 8687257 | 140 | -12.29 |
| ADediting_289097 | chr11_8687252_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-664a-5p | chr11 | 8687250 | 8687256 | 7mer-m8 | 8687234 | 8687257 | 141 | -15.02 |
| ADediting_289098 | chr11_8687256_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4794 | chr11 | 8687250 | 8687256 | 7mer-m8 | 8687236 | 8687257 | 140 | -12.29 |
| ADediting_289098 | chr11_8687256_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-664a-5p | chr11 | 8687250 | 8687256 | 7mer-m8 | 8687234 | 8687257 | 141 | -15.02 |
| ADediting_289099 | chr11_8687278_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-10399-5p | chr11 | 8687273 | 8687279 | 7mer-m8 | 8687259 | 8687280 | 152 | -11.75 |
| ADediting_289099 | chr11_8687278_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6504-3p | chr11 | 8687273 | 8687279 | 7mer-m8 | 8687259 | 8687280 | 148 | -14.2 |
| ADediting_289099 | chr11_8687278_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-7151-3p | chr11 | 8687271 | 8687278 | 8mer-1a | 8687262 | 8687278 | 142 | -13.26 |
| ADediting_289100 | chr11_8687279_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-10399-5p | chr11 | 8687273 | 8687279 | 7mer-m8 | 8687259 | 8687280 | 152 | -11.75 |
| ADediting_289100 | chr11_8687279_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-5089-5p | chr11 | 8687277 | 8687283 | 7mer-m8 | 8687265 | 8687284 | 146 | -12.33 |
| ADediting_289100 | chr11_8687279_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6504-3p | chr11 | 8687273 | 8687279 | 7mer-m8 | 8687259 | 8687280 | 148 | -14.2 |
| ADediting_289101 | chr11_8687284_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-5089-5p | chr11 | 8687277 | 8687283 | 7mer-m8 | 8687265 | 8687284 | 146 | -12.33 |
| ADediting_289101 | chr11_8687284_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6506-5p | chr11 | 8687278 | 8687284 | 7mer-m8 | 8687264 | 8687285 | 151 | -16.08 |
| ADediting_289102 | chr11_8687288_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-3973 | chr11 | 8687286 | 8687292 | 7mer-m8 | 8687269 | 8687293 | 146 | -9.55 |
| ADediting_289102 | chr11_8687288_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-562 | chr11 | 8687284 | 8687290 | 7mer-m8 | 8687272 | 8687291 | 150 | -14.19 |
| ADediting_289103 | chr11_8687295_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-519d-5p | chr11 | 8687289 | 8687295 | 7mer-m8 | 8687271 | 8687296 | 154 | -19.74 |
| ADediting_289104 | chr11_8687301_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-149-5p | chr11 | 8687299 | 8687305 | 7mer-m8 | 8687284 | 8687306 | 152 | -23.06 |
| ADediting_289104 | chr11_8687301_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-24-3p | chr11 | 8687297 | 8687304 | 8mer-1a | 8687282 | 8687304 | 151 | -19.09 |
| ADediting_289105 | chr11_8687305_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-149-5p | chr11 | 8687299 | 8687305 | 7mer-m8 | 8687284 | 8687306 | 152 | -23.06 |
| ADediting_289106 | chr11_8687317_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-1270 | chr11 | 8687310 | 8687316 | 7mer-m8 | 8687295 | 8687317 | 140 | -20.77 |
| ADediting_289106 | chr11_8687317_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-620 | chr11 | 8687310 | 8687316 | 7mer-m8 | 8687298 | 8687317 | 140 | -9.76 |
| ADediting_289106 | chr11_8687317_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-660-3p | chr11 | 8687315 | 8687321 | 7mer-m8 | 8687302 | 8687322 | 140 | -15.65 |
| ADediting_289107 | chr11_8687320_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-1281 | chr11 | 8687317 | 8687323 | 7mer-m8 | 8687308 | 8687324 | 145 | -17.85 |
| ADediting_289107 | chr11_8687320_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-660-3p | chr11 | 8687315 | 8687321 | 7mer-m8 | 8687302 | 8687322 | 140 | -15.65 |
| ADediting_289107 | chr11_8687320_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6829-3p | chr11 | 8687316 | 8687322 | 7mer-m8 | 8687304 | 8687323 | 142 | -18.59 |
| ADediting_289109 | chr11_8687342_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4638-5p | chr11 | 8687336 | 8687343 | 8mer-1a | 8687322 | 8687343 | 148 | -19.1 |
| ADediting_289111 | chr11_8687352_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-106a-3p | chr11 | 8687350 | 8687356 | 7mer-m8 | 8687338 | 8687357 | 147 | -14.29 |
| ADediting_289111 | chr11_8687352_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-183-5p | chr11 | 8687346 | 8687352 | 7mer-m8 | 8687333 | 8687353 | 142 | -18.67 |
| ADediting_289112 | chr11_8687679_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6512-3p | chr11 | 8687672 | 8687678 | 7mer-m8 | 8687658 | 8687679 | 140 | -20.03 |
| ADediting_289112 | chr11_8687679_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-6720-5p | chr11 | 8687672 | 8687678 | 7mer-m8 | 8687658 | 8687679 | 152 | -28.64 |
| ADediting_289112 | chr11_8687679_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-766-3p | chr11 | 8687673 | 8687679 | 7mer-m8 | 8687655 | 8687680 | 146 | -22.78 |
| ADediting_289115 | chr11_8687746_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4649-3p | chr11 | 8687740 | 8687746 | 7mer-m8 | 8687727 | 8687747 | 140 | -14.11 |
| ADediting_289115 | chr11_8687746_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-7160-5p | chr11 | 8687741 | 8687747 | 7mer-m8 | 8687729 | 8687748 | 149 | -19.19 |
| ADediting_289116 | chr11_8687755_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-12126 | chr11 | 8687750 | 8687757 | 8mer-1a | 8687734 | 8687757 | 155 | -14.03 |
| ADediting_289116 | chr11_8687755_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-450a-1-3p | chr11 | 8687748 | 8687754 | 7mer-m8 | 8687734 | 8687755 | 147 | -10.48 |
| ADediting_289117 | chr11_8687758_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-5690 | chr11 | 8687755 | 8687761 | 7mer-m8 | 8687742 | 8687762 | 145 | -16.74 |
| ADediting_289121 | chr11_8687813_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-593-3p | chr11 | 8687812 | 8687818 | 7mer-1a | 8687800 | 8687818 | 140 | -19.02 |
| ADediting_289122 | chr11_8687835_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4794 | chr11 | 8687833 | 8687839 | 7mer-m8 | 8687818 | 8687840 | 151 | -21.79 |
| ADediting_289122 | chr11_8687835_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-664a-5p | chr11 | 8687833 | 8687839 | 7mer-m8 | 8687817 | 8687840 | 141 | -16.24 |
| ADediting_289123 | chr11_8687881_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-887-5p | chr11 | 8687874 | 8687881 | 8mer-1a | 8687862 | 8687881 | 143 | -13.53 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-556-3p | chr11 | 8689483 | 8689489 | 7mer-m8 | 8689470 | 8689490 | 144 | -12.86 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-5581-3p | chr11 | 8688253 | 8688260 | 8mer-1a | 8688241 | 8688260 | 153 | -17.3 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-151a-3p | chr11 | 8686886 | 8686893 | 8mer-1a | 8686873 | 8686893 | 142 | -13 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4477b | chr11 | 8686534 | 8686540 | 7mer-m8 | 8686520 | 8686541 | 142 | -12.35 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-4477b | chr11 | 8686534 | 8686540 | 7mer-m8 | 8686520 | 8686541 | 142 | -12.35 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-337-3p | chr11 | 8686173 | 8686179 | 7mer-1a | 8686157 | 8686179 | 140 | -22.22 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-381-3p | chr11 | 8687152 | 8687158 | 7mer-m8 | 8687139 | 8687159 | 144 | -9.01 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000166441.13 | ENST00000314138.11 | RPL27A-201 | hsa-miR-381-3p | chr11 | 8687152 | 8687158 | 7mer-m8 | 8687139 | 8687159 | 144 | -9.01 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for RPL27A |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000314138.11 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_289062 | ENST00000314138.11 | chr11_8686275_+ | 938 | -1569.10 | -1569.90 | -1597.10 |
| ADediting_289063 | ENST00000314138.11 | chr11_8686287_+ | 950 | -1569.10 | -1569.90 | -1597.10 |
| ADediting_289064 | ENST00000314138.11 | chr11_8686293_+ | 956 | -1569.50 | -1569.90 | -1597.10 |
| ADediting_289065 | ENST00000314138.11 | chr11_8686296_+ | 959 | -1569.30 | -1569.90 | -1597.10 |
| ADediting_289066 | ENST00000314138.11 | chr11_8686306_+ | 969 | -1569.50 | -1569.90 | -1597.10 |
| ADediting_289067 | ENST00000314138.11 | chr11_8686311_+ | 974 | -1569.10 | -1569.90 | -1597.10 |
| ADediting_289068 | ENST00000314138.11 | chr11_8686325_+ | 988 | -1573.40 | -1569.90 | -1597.10 |
| ADediting_289069 | ENST00000314138.11 | chr11_8686348_+ | 1011 | -1569.20 | -1569.90 | -1597.10 |
| ADediting_289070 | ENST00000314138.11 | chr11_8686360_+ | 1023 | -1569.60 | -1569.90 | -1597.10 |
| ADediting_289071 | ENST00000314138.11 | chr11_8686361_+ | 1024 | -1576.60 | -1569.90 | -1597.10 |
| ADediting_289072 | ENST00000314138.11 | chr11_8686370_+ | 1033 | -1569.90 | -1569.90 | -1597.10 |
| ADediting_289073 | ENST00000314138.11 | chr11_8686372_+ | 1035 | -1569.20 | -1569.90 | -1597.10 |
| ADediting_289074 | ENST00000314138.11 | chr11_8686383_+ | 1046 | -1569.50 | -1569.90 | -1597.10 |
| ADediting_289075 | ENST00000314138.11 | chr11_8686392_+ | 1055 | -1573.80 | -1569.90 | -1597.10 |
| ADediting_289076 | ENST00000314138.11 | chr11_8686396_+ | 1059 | -1570.00 | -1569.90 | -1597.10 |
| ADediting_289077 | ENST00000314138.11 | chr11_8686397_+ | 1060 | -1569.90 | -1569.90 | -1597.10 |
| ADediting_289078 | ENST00000314138.11 | chr11_8686405_+ | 1068 | -1570.40 | -1569.90 | -1597.10 |
| ADediting_289079 | ENST00000314138.11 | chr11_8686411_+ | 1074 | -1569.90 | -1569.90 | -1597.10 |
| ADediting_289080 | ENST00000314138.11 | chr11_8686414_+ | 1077 | -1569.60 | -1569.90 | -1597.10 |
| ADediting_289081 | ENST00000314138.11 | chr11_8686505_+ | 1168 | -1571.50 | -1569.90 | -1597.10 |
| ADediting_289082 | ENST00000314138.11 | chr11_8687204_+ | 1867 | -1569.20 | -1569.90 | -1597.10 |
| ADediting_289083 | ENST00000314138.11 | chr11_8687210_+ | 1873 | -1577.10 | -1569.90 | -1597.10 |
| ADediting_289084 | ENST00000314138.11 | chr11_8687213_+ | 1876 | -1569.60 | -1569.90 | -1597.10 |
| ADediting_289085 | ENST00000314138.11 | chr11_8687214_+ | 1877 | -1569.90 | -1569.90 | -1597.10 |
| ADediting_289086 | ENST00000314138.11 | chr11_8687223_+ | 1886 | -1570.00 | -1569.90 | -1597.10 |
| ADediting_289087 | ENST00000314138.11 | chr11_8687224_+ | 1887 | -1569.90 | -1569.90 | -1597.10 |
| ADediting_289088 | ENST00000314138.11 | chr11_8687235_+ | 1898 | -1569.90 | -1569.90 | -1597.10 |
| ADediting_289089 | ENST00000314138.11 | chr11_8687238_+ | 1901 | -1572.60 | -1569.90 | -1597.10 |
| ADediting_289090 | ENST00000314138.11 | chr11_8687239_+ | 1902 | -1570.00 | -1569.90 | -1597.10 |
| ADediting_289091 | ENST00000314138.11 | chr11_8687240_+ | 1903 | -1569.90 | -1569.90 | -1597.10 |
| ADediting_289092 | ENST00000314138.11 | chr11_8687242_+ | 1905 | -1569.90 | -1569.90 | -1597.10 |
| ADediting_289093 | ENST00000314138.11 | chr11_8687244_+ | 1907 | -1569.60 | -1569.90 | -1597.10 |
| ADediting_289094 | ENST00000314138.11 | chr11_8687247_+ | 1910 | -1570.00 | -1569.90 | -1597.10 |
| ADediting_289095 | ENST00000314138.11 | chr11_8687248_+ | 1911 | -1570.00 | -1569.90 | -1597.10 |
| ADediting_289096 | ENST00000314138.11 | chr11_8687249_+ | 1912 | -1569.90 | -1569.90 | -1597.10 |
| ADediting_289097 | ENST00000314138.11 | chr11_8687252_+ | 1915 | -1569.60 | -1569.90 | -1597.10 |
| ADediting_289098 | ENST00000314138.11 | chr11_8687256_+ | 1919 | -1573.80 | -1569.90 | -1597.10 |
| ADediting_289099 | ENST00000314138.11 | chr11_8687278_+ | 1941 | -1570.00 | -1569.90 | -1597.10 |
| ADediting_289100 | ENST00000314138.11 | chr11_8687279_+ | 1942 | -1569.90 | -1569.90 | -1597.10 |
| ADediting_289101 | ENST00000314138.11 | chr11_8687284_+ | 1947 | -1569.20 | -1569.90 | -1597.10 |
| ADediting_289102 | ENST00000314138.11 | chr11_8687288_+ | 1951 | -1569.60 | -1569.90 | -1597.10 |
| ADediting_289103 | ENST00000314138.11 | chr11_8687295_+ | 1958 | -1568.90 | -1569.90 | -1597.10 |
| ADediting_289104 | ENST00000314138.11 | chr11_8687301_+ | 1964 | -1569.00 | -1569.90 | -1597.10 |
| ADediting_289105 | ENST00000314138.11 | chr11_8687305_+ | 1968 | -1569.20 | -1569.90 | -1597.10 |
| ADediting_289106 | ENST00000314138.11 | chr11_8687317_+ | 1980 | -1574.10 | -1569.90 | -1597.10 |
| ADediting_289107 | ENST00000314138.11 | chr11_8687320_+ | 1983 | -1569.60 | -1569.90 | -1597.10 |
| ADediting_289108 | ENST00000314138.11 | chr11_8687337_+ | 2000 | -1569.00 | -1569.90 | -1597.10 |
| ADediting_289109 | ENST00000314138.11 | chr11_8687342_+ | 2005 | -1569.00 | -1569.90 | -1597.10 |
| ADediting_289110 | ENST00000314138.11 | chr11_8687344_+ | 2007 | -1569.30 | -1569.90 | -1597.10 |
| ADediting_289111 | ENST00000314138.11 | chr11_8687352_+ | 2015 | -1566.50 | -1569.90 | -1597.10 |
| ADediting_289112 | ENST00000314138.11 | chr11_8687679_+ | 2342 | -1573.10 | -1569.90 | -1597.10 |
| ADediting_289113 | ENST00000314138.11 | chr11_8687693_+ | 2356 | -1569.90 | -1569.90 | -1597.10 |
| ADediting_289114 | ENST00000314138.11 | chr11_8687698_+ | 2361 | -1574.50 | -1569.90 | -1597.10 |
| ADediting_289115 | ENST00000314138.11 | chr11_8687746_+ | 2409 | -1569.20 | -1569.90 | -1597.10 |
| ADediting_289116 | ENST00000314138.11 | chr11_8687755_+ | 2418 | -1570.80 | -1569.90 | -1597.10 |
| ADediting_289117 | ENST00000314138.11 | chr11_8687758_+ | 2421 | -1570.60 | -1569.90 | -1597.10 |
| ADediting_289118 | ENST00000314138.11 | chr11_8687768_+ | 2431 | -1572.20 | -1569.90 | -1597.10 |
| ADediting_289119 | ENST00000314138.11 | chr11_8687795_+ | 2458 | -1572.50 | -1569.90 | -1597.10 |
| ADediting_289120 | ENST00000314138.11 | chr11_8687810_+ | 2473 | -1571.90 | -1569.90 | -1597.10 |
| ADediting_289121 | ENST00000314138.11 | chr11_8687813_+ | 2476 | -1571.70 | -1569.90 | -1597.10 |
| ADediting_289122 | ENST00000314138.11 | chr11_8687835_+ | 2498 | -1573.20 | -1569.90 | -1597.10 |
| ADediting_289123 | ENST00000314138.11 | chr11_8687881_+ | 2544 | -1570.00 | -1569.90 | -1597.10 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for RPL27A |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| IFG | ADediting_289064 | chr11_8686293_+ | 0.380559124752295 | 0.183263672435546 | 0.429646413740556 | 0.165332131573923 | 0.00370371768369606 | 0.558611105198085 |
| TCX | ADediting_289069 | chr11_8686348_+ | 0.613714581010525 | -0.0415447123892954 | 0.000172433811214511 | 0.302033965238042 | 0.0334418092016302 | -0.173777750137477 |
| CER | ADediting_289097 | chr11_8687252_+ | 0.000660775598144228 | 0.274967071922079 | 1.48883381218757e-05 | 0.345509553938131 | 0.0537159718170271 | 0.157843554816563 |
| CER | ADediting_289101 | chr11_8687284_+ | 0.00032334645272422 | 0.289700881981351 | 1.18975102668619e-06 | 0.384464557340351 | 0.484091494694671 | 0.0575674689077958 |
| TCX | ADediting_289101 | chr11_8687284_+ | 0.00117533031877866 | 0.262471717943931 | 0.000140577024383389 | 0.305925230297319 | 0.925661465770562 | 0.00768245529926211 |
| CER | ADediting_289109 | chr11_8687342_+ | 1.02424220567289e-08 | 0.446477558842296 | 5.15893512730417e-07 | 0.396310348196971 | 1.68076152164203e-05 | 0.343505018429909 |
| TCX | ADediting_289109 | chr11_8687342_+ | 3.48480034220876e-06 | 0.36851384054993 | 0.000362197824979464 | 0.287414706442647 | 0.519965190023599 | -0.0529393194775653 |
| CER | ADediting_289114 | chr11_8687698_+ | 1.51899611510469e-07 | 0.412854699482408 | 4.65895586872244e-06 | 0.364054255444042 | 0.055741044612236 | 0.156545391724173 |
| TCX | ADediting_289114 | chr11_8687698_+ | 1.99320908535123e-06 | 0.376911219239924 | 8.07191442954929e-05 | 0.316229168433555 | 0.147135186553087 | -0.118943944956136 |
| CER | ADediting_289115 | chr11_8687746_+ | 2.43850133343588e-07 | 0.406555470892273 | 2.22821196607595e-06 | 0.375254589037972 | 0.761564063887328 | 0.0249798557894618 |
| TCX | ADediting_289116 | chr11_8687755_+ | 3.95463148451745e-05 | 0.328953053261319 | 0.00945410101554009 | 0.211265731594471 | 0.91646252248055 | -0.0086363792843702 |
| CER | ADediting_289117 | chr11_8687758_+ | 0.00310039241296049 | 0.239956385437144 | 7.83583237262501e-05 | 0.316770008254745 | 0.318705441803767 | 0.0819632275314605 |
| CER | ADediting_289120 | chr11_8687810_+ | 1.53715287387368e-06 | 0.380738048735596 | 1.17187027535835e-07 | 0.416253482799111 | 0.403093623382907 | 0.0687623856645651 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.16799883510697e-07 | 0.295382842122171 | 7.82990664908344e-15 | 0.422221316572689 | 0.383682797879745 | 0.0496469422689381 |
| AC | 3.49068655403855e-61 | 0.816819741608357 | 1.62444272598397e-37 | 0.69582366067988 | 7.44946386940422e-18 | 0.508627811835572 |
| PCC | 6.65848451246236e-08 | 0.378584144529061 | 8.03288713791461e-07 | 0.348106812538604 | 0.0038356495603453 | 0.20828013454409 |
| TCX | 0.59915772920188 | -0.0432578248887201 | 6.1815634982792e-05 | -0.321054045888948 | 6.20949514454546e-09 | 0.45233494628328 |
| FP | 4.18967569845409e-10 | 0.446491593359804 | 2.0366926576998e-06 | 0.347310305793953 | 0.55638276141231 | 0.0443801006452015 |
| IFG | 0.00879467120220432 | 0.512587194713893 | 0.0968821148337641 | 0.339467640335147 | 0.512229325885715 | 0.137488256694184 |
| PG | 6.90712501999625e-10 | 0.432720875997378 | 6.56605540861933e-05 | 0.288372112628167 | 0.586201069437401 | 0.0401683058771344 |
| STG | 3.37256745324623e-06 | 0.482401168834269 | 0.00406628624850935 | 0.310338118502056 | 0.7910503621608 | -0.0293415033367584 |
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Relation with AD stages for RPL27A |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_289075 | chr11_8686392_+ | 0.000651224037427049 | 0.322982759987015 |
| CER | ADediting_289079 | chr11_8686411_+ | 0.00125808635037898 | 0.306425715734911 |
| CER | ADediting_289092 | chr11_8687242_+ | 0.000292927457741565 | 0.341892567483842 |
| CER | ADediting_289097 | chr11_8687252_+ | 4.48418397471015e-05 | 0.382130359370323 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for RPL27A |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RPL27A |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| RPL27A | C0007758 | Cerebellar Ataxia | 1 | CTD_human |
| RPL27A | C0030312 | Pancytopenia | 1 | CTD_human |
| RPL27A | C0152013 | Adenocarcinoma of lung (disorder) | 1 | CTD_human |
| RPL27A | C0162834 | Hyperpigmentation | 1 | CTD_human |
| RPL27A | C0234162 | Cerebellar Dysmetria | 1 | CTD_human |
| RPL27A | C0234357 | Adiadochokinesis | 1 | CTD_human |
| RPL27A | C0750994 | Cerebellar Hemiataxia | 1 | CTD_human |
| RPL27A | C3668822 | Hypermetria (finding) | 1 | CTD_human |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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