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![]() | Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for PLEKHA2 |
Gene summary |
| Gene information | Gene symbol | PLEKHA2 | Gene ID | 59339 |
| Gene name | pleckstrin homology domain containing A2 | |
| Synonyms | TAPP2 | |
| Cytomap | 8p11.22 | |
| Type of gene | protein-coding | |
| Description | pleckstrin homology domain-containing family A member 2PH domain-containing family A member 2TAPP-2pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2tandem PH Domain containing protein-2tandem PH domain-conta | |
| Modification date | 20200313 | |
| UniProtAcc | Q9HB19, | |
| Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for PLEKHA2 |
RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA editing frequencies across three data sets. |
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The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA A-to-I editing events in AD. |
| ADediting_1407013(38905287, +), ADediting_1407014(38905359, +), ADediting_1407015(38905397, +), ADediting_1407016(38905415, +), ADediting_1407017(38907678, +), ADediting_1407018(38907681, +), ADediting_1407019(38907875, +), ADediting_1407020(38907883, +), ADediting_1407021(38907936, +), ADediting_1407022(38907955, +), ADediting_1407023(38907956, +), ADediting_1407024(38907958, +), ADediting_1407025(38907985, +), ADediting_1407026(38909022, +), ADediting_1407027(38909032, +), ADediting_1407028(38909036, +), ADediting_1407029(38909988, +), ADediting_1407030(38910057, +), ADediting_1407031(38910061, +), ADediting_1407032(38910069, +), ADediting_1407033(38910074, +), ADediting_1407034(38910166, +), ADediting_1407035(38910177, +), ADediting_1407036(38910192, +), ADediting_1407037(38910231, +), ADediting_1407042(38911268, +), ADediting_1407043(38911276, +), ADediting_1407044(38911317, +), ADediting_1407045(38911330, +), ADediting_1407046(38911337, +), ADediting_1407047(38911354, +), ADediting_1407049(38911426, +), ADediting_1407051(38911472, +), ADediting_1407052(38911498, +), ADediting_1407053(38911499, +), ADediting_1407058(38911878, +), ADediting_1407059(38911885, +), ADediting_1407060(38911896, +), ADediting_1407062(38911920, +), ADediting_1407063(38911933, +), ADediting_1407065(38912043, +), ADediting_1407068(38913188, +), ADediting_1407069(38913217, +), ADediting_1407071(38913241, +), ADediting_1407072(38913243, +), ADediting_1407073(38913244, +), ADediting_1407074(38913270, +), ADediting_1407075(38913285, +), ADediting_1407077(38913314, +), ADediting_1407080(38914978, +), ADediting_1407081(38914995, +), ADediting_1407082(38915047, +), ADediting_1407083(38915059, +), ADediting_1407084(38915076, +), ADediting_1407085(38915181, +), ADediting_1407093(38916053, +), ADediting_1407094(38916088, +), ADediting_1407095(38916093, +), ADediting_1407096(38916105, +), ADediting_1407097(38916215, +), ADediting_1407098(38916229, +), ADediting_1407099(38916251, +), ADediting_1407103(38928438, +), ADediting_1407104(38930466, +), ADediting_1407105(38931022, +), ADediting_1407106(38931044, +), ADediting_1407107(38931068, +), ADediting_1407108(38931082, +), ADediting_1407109(38931233, +), ADediting_1407110(38937164, +), ADediting_1407111(38938928, +), ADediting_1407112(38938929, +), ADediting_1407113(38938968, +), ADediting_1407114(38939004, +), ADediting_1407115(38939021, +), ADediting_1407116(38939033, +), ADediting_1407117(38939043, +), ADediting_1407118(38939069, +), ADediting_1407119(38939070, +), ADediting_1407120(38939084, +), ADediting_1407121(38939101, +), ADediting_1407122(38939138, +), ADediting_1407123(38939166, +), ADediting_1407124(38939814, +), ADediting_1407125(38939884, +), ADediting_1407126(38939904, +), ADediting_1407127(38939974, +), ADediting_1407128(38939984, +), ADediting_1407129(38940087, +), ADediting_1407130(38940140, +), ADediting_1407131(38940211, +), ADediting_1407132(38940212, +), ADediting_1407133(38940222, +), ADediting_1407134(38940227, +), ADediting_1407135(38940252, +), ADediting_1407136(38940256, +), ADediting_1407137(38940278, +), ADediting_1407138(38940279, +), ADediting_1407139(38940305, +), ADediting_1407140(38940311, +), ADediting_1407141(38940348, +), ADediting_1407142(38940349, +), ADediting_1407143(38941113, +), ADediting_1407144(38941126, +), ADediting_1407145(38941137, +), ADediting_1407146(38941157, +), ADediting_1407147(38941182, +), ADediting_1407148(38941186, +), ADediting_1407149(38941196, +), ADediting_1407150(38941253, +), ADediting_1407151(38941261, +), ADediting_1407152(38941278, +), ADediting_1407153(38941318, +), ADediting_1407154(38941321, +), ADediting_1407155(38942144, +), ADediting_1407156(38942173, +), ADediting_1407157(38942182, +), ADediting_1407158(38942192, +), ADediting_1407159(38942203, +), ADediting_1407160(38942216, +), ADediting_1407161(38942220, +), ADediting_1407162(38942252, +), ADediting_1407163(38942257, +), ADediting_1407164(38942277, +), ADediting_1407165(38942283, +), ADediting_1407166(38942296, +), ADediting_1407167(38942318, +), ADediting_1407168(38944257, +), ADediting_1407169(38947227, +), ADediting_1407170(38947269, +), ADediting_1407171(38947286, +), ADediting_1407172(38947290, +), ADediting_1407173(38947291, +), ADediting_1407174(38947295, +), ADediting_1407175(38947371, +), ADediting_1407176(38947460, +), ADediting_1407177(38947512, +), ADediting_1407178(38947529, +), ADediting_1407179(38947922, +), ADediting_1407180(38947975, +), ADediting_1407181(38947992, +), ADediting_1407182(38947998, +), ADediting_1407183(38948007, +), ADediting_1407184(38948971, +), ADediting_1407185(38948988, +), ADediting_1407186(38949045, +), ADediting_1407187(38949054, +), ADediting_1407188(38949063, +), ADediting_1407189(38949073, +), ADediting_1407190(38949151, +), ADediting_1407191(38950111, +), ADediting_1407192(38950141, +), ADediting_1407193(38950142, +), ADediting_1407194(38950154, +), ADediting_1407195(38950269, +), ADediting_1407196(38950295, +), ADediting_1407197(38950308, +), ADediting_1407198(38955880, +), ADediting_1407199(38955904, +), ADediting_1407200(38955910, +), ADediting_1407201(38956562, +), ADediting_1407202(38967935, +), ADediting_1407203(38973012, +), ADediting_1407204(38973017, +), ADediting_1407205(38973037, +), ADediting_1407206(38973038, +), ADediting_1407207(38973065, +), ADediting_1407208(38973066, +), ADediting_1407209(38973067, +), ADediting_1407210(38973070, +), ADediting_1407211(38973079, +), ADediting_1590705(38943219, +), ADediting_1590706(38973024, +), ADediting_1590707(38973057, +), ADediting_1669801(38909976, +), ADediting_1669802(38912130, +), ADediting_1669808(38942163, +), ADediting_1669809(38942206, +), ADediting_1669810(38950171, +), ADediting_1669811(38950217, +), |
Top |
RNA editing positional annotations for PLEKHA2 using Annovar |
Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1407013 | chr8_38905287_+ | intronic |
| ADediting_1407014 | chr8_38905359_+ | intronic |
| ADediting_1407015 | chr8_38905397_+ | intronic |
| ADediting_1407016 | chr8_38905415_+ | intronic |
| ADediting_1407017 | chr8_38907678_+ | intronic |
| ADediting_1407018 | chr8_38907681_+ | intronic |
| ADediting_1407019 | chr8_38907875_+ | intronic |
| ADediting_1407020 | chr8_38907883_+ | intronic |
| ADediting_1407021 | chr8_38907936_+ | intronic |
| ADediting_1407022 | chr8_38907955_+ | intronic |
| ADediting_1407023 | chr8_38907956_+ | intronic |
| ADediting_1407024 | chr8_38907958_+ | intronic |
| ADediting_1407025 | chr8_38907985_+ | intronic |
| ADediting_1407026 | chr8_38909022_+ | intronic |
| ADediting_1407027 | chr8_38909032_+ | intronic |
| ADediting_1407028 | chr8_38909036_+ | intronic |
| ADediting_1407029 | chr8_38909988_+ | intronic |
| ADediting_1407030 | chr8_38910057_+ | intronic |
| ADediting_1407031 | chr8_38910061_+ | intronic |
| ADediting_1407032 | chr8_38910069_+ | intronic |
| ADediting_1407033 | chr8_38910074_+ | intronic |
| ADediting_1407034 | chr8_38910166_+ | intronic |
| ADediting_1407035 | chr8_38910177_+ | intronic |
| ADediting_1407036 | chr8_38910192_+ | intronic |
| ADediting_1407037 | chr8_38910231_+ | intronic |
| ADediting_1407042 | chr8_38911268_+ | intronic |
| ADediting_1407043 | chr8_38911276_+ | intronic |
| ADediting_1407044 | chr8_38911317_+ | intronic |
| ADediting_1407045 | chr8_38911330_+ | intronic |
| ADediting_1407046 | chr8_38911337_+ | intronic |
| ADediting_1407047 | chr8_38911354_+ | intronic |
| ADediting_1407049 | chr8_38911426_+ | intronic |
| ADediting_1407051 | chr8_38911472_+ | intronic |
| ADediting_1407052 | chr8_38911498_+ | intronic |
| ADediting_1407053 | chr8_38911499_+ | intronic |
| ADediting_1407058 | chr8_38911878_+ | intronic |
| ADediting_1407059 | chr8_38911885_+ | intronic |
| ADediting_1407060 | chr8_38911896_+ | intronic |
| ADediting_1407062 | chr8_38911920_+ | intronic |
| ADediting_1407063 | chr8_38911933_+ | intronic |
| ADediting_1407065 | chr8_38912043_+ | intronic |
| ADediting_1407068 | chr8_38913188_+ | intronic |
| ADediting_1407069 | chr8_38913217_+ | intronic |
| ADediting_1407071 | chr8_38913241_+ | intronic |
| ADediting_1407072 | chr8_38913243_+ | intronic |
| ADediting_1407073 | chr8_38913244_+ | intronic |
| ADediting_1407074 | chr8_38913270_+ | intronic |
| ADediting_1407075 | chr8_38913285_+ | intronic |
| ADediting_1407077 | chr8_38913314_+ | intronic |
| ADediting_1407080 | chr8_38914978_+ | intronic |
| ADediting_1407081 | chr8_38914995_+ | intronic |
| ADediting_1407082 | chr8_38915047_+ | intronic |
| ADediting_1407083 | chr8_38915059_+ | intronic |
| ADediting_1407084 | chr8_38915076_+ | intronic |
| ADediting_1407085 | chr8_38915181_+ | intronic |
| ADediting_1407093 | chr8_38916053_+ | intronic |
| ADediting_1407094 | chr8_38916088_+ | intronic |
| ADediting_1407095 | chr8_38916093_+ | intronic |
| ADediting_1407096 | chr8_38916105_+ | intronic |
| ADediting_1407097 | chr8_38916215_+ | intronic |
| ADediting_1407098 | chr8_38916229_+ | intronic |
| ADediting_1407099 | chr8_38916251_+ | intronic |
| ADediting_1407103 | chr8_38928438_+ | intronic |
| ADediting_1407104 | chr8_38930466_+ | intronic |
| ADediting_1407105 | chr8_38931022_+ | intronic |
| ADediting_1407106 | chr8_38931044_+ | intronic |
| ADediting_1407107 | chr8_38931068_+ | intronic |
| ADediting_1407108 | chr8_38931082_+ | intronic |
| ADediting_1407109 | chr8_38931233_+ | intronic |
| ADediting_1407110 | chr8_38937164_+ | intronic |
| ADediting_1407111 | chr8_38938928_+ | intronic |
| ADediting_1407112 | chr8_38938929_+ | intronic |
| ADediting_1407113 | chr8_38938968_+ | intronic |
| ADediting_1407114 | chr8_38939004_+ | intronic |
| ADediting_1407115 | chr8_38939021_+ | intronic |
| ADediting_1407116 | chr8_38939033_+ | intronic |
| ADediting_1407117 | chr8_38939043_+ | intronic |
| ADediting_1407118 | chr8_38939069_+ | intronic |
| ADediting_1407119 | chr8_38939070_+ | intronic |
| ADediting_1407120 | chr8_38939084_+ | intronic |
| ADediting_1407121 | chr8_38939101_+ | intronic |
| ADediting_1407122 | chr8_38939138_+ | intronic |
| ADediting_1407123 | chr8_38939166_+ | intronic |
| ADediting_1407124 | chr8_38939814_+ | intronic |
| ADediting_1407125 | chr8_38939884_+ | intronic |
| ADediting_1407126 | chr8_38939904_+ | intronic |
| ADediting_1407127 | chr8_38939974_+ | intronic |
| ADediting_1407128 | chr8_38939984_+ | intronic |
| ADediting_1407129 | chr8_38940087_+ | intronic |
| ADediting_1407130 | chr8_38940140_+ | intronic |
| ADediting_1407131 | chr8_38940211_+ | intronic |
| ADediting_1407132 | chr8_38940212_+ | intronic |
| ADediting_1407133 | chr8_38940222_+ | intronic |
| ADediting_1407134 | chr8_38940227_+ | intronic |
| ADediting_1407135 | chr8_38940252_+ | intronic |
| ADediting_1407136 | chr8_38940256_+ | intronic |
| ADediting_1407137 | chr8_38940278_+ | intronic |
| ADediting_1407138 | chr8_38940279_+ | intronic |
| ADediting_1407139 | chr8_38940305_+ | intronic |
| ADediting_1407140 | chr8_38940311_+ | intronic |
| ADediting_1407141 | chr8_38940348_+ | intronic |
| ADediting_1407142 | chr8_38940349_+ | intronic |
| ADediting_1407143 | chr8_38941113_+ | intronic |
| ADediting_1407144 | chr8_38941126_+ | intronic |
| ADediting_1407145 | chr8_38941137_+ | intronic |
| ADediting_1407146 | chr8_38941157_+ | intronic |
| ADediting_1407147 | chr8_38941182_+ | intronic |
| ADediting_1407148 | chr8_38941186_+ | intronic |
| ADediting_1407149 | chr8_38941196_+ | intronic |
| ADediting_1407150 | chr8_38941253_+ | intronic |
| ADediting_1407151 | chr8_38941261_+ | intronic |
| ADediting_1407152 | chr8_38941278_+ | intronic |
| ADediting_1407153 | chr8_38941318_+ | intronic |
| ADediting_1407154 | chr8_38941321_+ | intronic |
| ADediting_1407155 | chr8_38942144_+ | intronic |
| ADediting_1407156 | chr8_38942173_+ | intronic |
| ADediting_1407157 | chr8_38942182_+ | intronic |
| ADediting_1407158 | chr8_38942192_+ | intronic |
| ADediting_1407159 | chr8_38942203_+ | intronic |
| ADediting_1407160 | chr8_38942216_+ | intronic |
| ADediting_1407161 | chr8_38942220_+ | intronic |
| ADediting_1407162 | chr8_38942252_+ | intronic |
| ADediting_1407163 | chr8_38942257_+ | intronic |
| ADediting_1407164 | chr8_38942277_+ | intronic |
| ADediting_1407165 | chr8_38942283_+ | intronic |
| ADediting_1407166 | chr8_38942296_+ | intronic |
| ADediting_1407167 | chr8_38942318_+ | intronic |
| ADediting_1407168 | chr8_38944257_+ | intronic |
| ADediting_1407169 | chr8_38947227_+ | intronic |
| ADediting_1407170 | chr8_38947269_+ | intronic |
| ADediting_1407171 | chr8_38947286_+ | intronic |
| ADediting_1407172 | chr8_38947290_+ | intronic |
| ADediting_1407173 | chr8_38947291_+ | intronic |
| ADediting_1407174 | chr8_38947295_+ | intronic |
| ADediting_1407175 | chr8_38947371_+ | intronic |
| ADediting_1407176 | chr8_38947460_+ | intronic |
| ADediting_1407177 | chr8_38947512_+ | intronic |
| ADediting_1407178 | chr8_38947529_+ | intronic |
| ADediting_1407179 | chr8_38947922_+ | intronic |
| ADediting_1407180 | chr8_38947975_+ | intronic |
| ADediting_1407181 | chr8_38947992_+ | intronic |
| ADediting_1407182 | chr8_38947998_+ | intronic |
| ADediting_1407183 | chr8_38948007_+ | intronic |
| ADediting_1407184 | chr8_38948971_+ | intronic |
| ADediting_1407185 | chr8_38948988_+ | intronic |
| ADediting_1407186 | chr8_38949045_+ | intronic |
| ADediting_1407187 | chr8_38949054_+ | intronic |
| ADediting_1407188 | chr8_38949063_+ | intronic |
| ADediting_1407189 | chr8_38949073_+ | intronic |
| ADediting_1407190 | chr8_38949151_+ | intronic |
| ADediting_1407191 | chr8_38950111_+ | intronic |
| ADediting_1407192 | chr8_38950141_+ | intronic |
| ADediting_1407193 | chr8_38950142_+ | intronic |
| ADediting_1407194 | chr8_38950154_+ | intronic |
| ADediting_1407195 | chr8_38950269_+ | intronic |
| ADediting_1407196 | chr8_38950295_+ | intronic |
| ADediting_1407197 | chr8_38950308_+ | intronic |
| ADediting_1407198 | chr8_38955880_+ | intronic |
| ADediting_1407199 | chr8_38955904_+ | intronic |
| ADediting_1407200 | chr8_38955910_+ | intronic |
| ADediting_1407201 | chr8_38956562_+ | intronic |
| ADediting_1407202 | chr8_38967935_+ | intronic |
| ADediting_1407203 | chr8_38973012_+ | UTR3 |
| ADediting_1407204 | chr8_38973017_+ | UTR3 |
| ADediting_1407205 | chr8_38973037_+ | UTR3 |
| ADediting_1407206 | chr8_38973038_+ | UTR3 |
| ADediting_1407207 | chr8_38973065_+ | UTR3 |
| ADediting_1407208 | chr8_38973066_+ | UTR3 |
| ADediting_1407209 | chr8_38973067_+ | UTR3 |
| ADediting_1407210 | chr8_38973070_+ | UTR3 |
| ADediting_1407211 | chr8_38973079_+ | UTR3 |
| ADediting_1590705 | chr8_38943219_+ | intronic |
| ADediting_1590706 | chr8_38973024_+ | UTR3 |
| ADediting_1590707 | chr8_38973057_+ | UTR3 |
| ADediting_1669801 | chr8_38909976_+ | intronic |
| ADediting_1669802 | chr8_38912130_+ | intronic |
| ADediting_1669808 | chr8_38942163_+ | intronic |
| ADediting_1669809 | chr8_38942206_+ | intronic |
| ADediting_1669810 | chr8_38950171_+ | intronic |
| ADediting_1669811 | chr8_38950217_+ | intronic |
Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1407013 | chr8_38905287_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1407014 | chr8_38905359_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1407015 | chr8_38905397_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1407016 | chr8_38905415_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1407017 | chr8_38907678_+ | SINE | Alu | Name=AluJb |
| ADediting_1407018 | chr8_38907681_+ | SINE | Alu | Name=AluJb |
| ADediting_1407019 | chr8_38907875_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407020 | chr8_38907883_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407021 | chr8_38907936_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407022 | chr8_38907955_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407023 | chr8_38907956_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407024 | chr8_38907958_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407025 | chr8_38907985_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407026 | chr8_38909022_+ | SINE | Alu | Name=AluSc |
| ADediting_1407027 | chr8_38909032_+ | SINE | Alu | Name=AluSc |
| ADediting_1407028 | chr8_38909036_+ | SINE | Alu | Name=AluSc |
| ADediting_1407029 | chr8_38909988_+ | SINE | Alu | Name=AluJb |
| ADediting_1407030 | chr8_38910057_+ | SINE | Alu | Name=AluJb |
| ADediting_1407031 | chr8_38910061_+ | SINE | Alu | Name=AluJb |
| ADediting_1407032 | chr8_38910069_+ | SINE | Alu | Name=AluJb |
| ADediting_1407033 | chr8_38910074_+ | SINE | Alu | Name=AluJb |
| ADediting_1407034 | chr8_38910166_+ | SINE | Alu | Name=AluJb |
| ADediting_1407035 | chr8_38910177_+ | SINE | Alu | Name=AluJb |
| ADediting_1407036 | chr8_38910192_+ | SINE | Alu | Name=AluJb |
| ADediting_1407037 | chr8_38910231_+ | SINE | Alu | Name=AluJb |
| ADediting_1407042 | chr8_38911268_+ | SINE | Alu | Name=AluSz |
| ADediting_1407043 | chr8_38911276_+ | SINE | Alu | Name=AluSz |
| ADediting_1407044 | chr8_38911317_+ | SINE | Alu | Name=AluSz |
| ADediting_1407045 | chr8_38911330_+ | SINE | Alu | Name=AluSz |
| ADediting_1407046 | chr8_38911337_+ | SINE | Alu | Name=AluSz |
| ADediting_1407047 | chr8_38911354_+ | SINE | Alu | Name=AluSz |
| ADediting_1407049 | chr8_38911426_+ | SINE | Alu | Name=AluSz |
| ADediting_1407051 | chr8_38911472_+ | SINE | Alu | Name=AluSz |
| ADediting_1407052 | chr8_38911498_+ | SINE | Alu | Name=AluSz |
| ADediting_1407053 | chr8_38911499_+ | SINE | Alu | Name=AluSz |
| ADediting_1407058 | chr8_38911878_+ | SINE | Alu | Name=AluJo |
| ADediting_1407059 | chr8_38911885_+ | SINE | Alu | Name=AluJo |
| ADediting_1407060 | chr8_38911896_+ | SINE | Alu | Name=AluJo |
| ADediting_1407062 | chr8_38911920_+ | SINE | Alu | Name=AluJo |
| ADediting_1407063 | chr8_38911933_+ | SINE | Alu | Name=AluJo |
| ADediting_1407065 | chr8_38912043_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407068 | chr8_38913188_+ | SINE | Alu | Name=AluSx |
| ADediting_1407069 | chr8_38913217_+ | SINE | Alu | Name=AluSx |
| ADediting_1407071 | chr8_38913241_+ | SINE | Alu | Name=AluSx |
| ADediting_1407072 | chr8_38913243_+ | SINE | Alu | Name=AluSx |
| ADediting_1407073 | chr8_38913244_+ | SINE | Alu | Name=AluSx |
| ADediting_1407074 | chr8_38913270_+ | SINE | Alu | Name=AluSx |
| ADediting_1407075 | chr8_38913285_+ | SINE | Alu | Name=AluSx |
| ADediting_1407077 | chr8_38913314_+ | SINE | Alu | Name=AluSx |
| ADediting_1407080 | chr8_38914978_+ | SINE | Alu | Name=AluJr |
| ADediting_1407081 | chr8_38914995_+ | SINE | Alu | Name=AluJr |
| ADediting_1407082 | chr8_38915047_+ | SINE | Alu | Name=AluJr |
| ADediting_1407083 | chr8_38915059_+ | SINE | Alu | Name=AluJr |
| ADediting_1407084 | chr8_38915076_+ | SINE | Alu | Name=AluJr |
| ADediting_1407085 | chr8_38915181_+ | SINE | Alu | Name=AluJr |
| ADediting_1407093 | chr8_38916053_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407094 | chr8_38916088_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407095 | chr8_38916093_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407096 | chr8_38916105_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407097 | chr8_38916215_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407098 | chr8_38916229_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407099 | chr8_38916251_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407103 | chr8_38928438_+ | SINE | Alu | Name=AluSz |
| ADediting_1407104 | chr8_38930466_+ | SINE | Alu | Name=AluSx |
| ADediting_1407105 | chr8_38931022_+ | SINE | Alu | Name=AluSx |
| ADediting_1407106 | chr8_38931044_+ | SINE | Alu | Name=AluSx |
| ADediting_1407107 | chr8_38931068_+ | SINE | Alu | Name=AluSx |
| ADediting_1407108 | chr8_38931082_+ | SINE | Alu | Name=AluSx |
| ADediting_1407109 | chr8_38931233_+ | SINE | Alu | Name=AluSx |
| ADediting_1407111 | chr8_38938928_+ | SINE | Alu | Name=AluSx |
| ADediting_1407112 | chr8_38938929_+ | SINE | Alu | Name=AluSx |
| ADediting_1407113 | chr8_38938968_+ | SINE | Alu | Name=AluSx |
| ADediting_1407114 | chr8_38939004_+ | SINE | Alu | Name=AluSx |
| ADediting_1407115 | chr8_38939021_+ | SINE | Alu | Name=AluSx |
| ADediting_1407116 | chr8_38939033_+ | SINE | Alu | Name=AluSx |
| ADediting_1407117 | chr8_38939043_+ | SINE | Alu | Name=AluSx |
| ADediting_1407118 | chr8_38939069_+ | SINE | Alu | Name=AluSx |
| ADediting_1407119 | chr8_38939070_+ | SINE | Alu | Name=AluSx |
| ADediting_1407120 | chr8_38939084_+ | SINE | Alu | Name=AluSx |
| ADediting_1407121 | chr8_38939101_+ | SINE | Alu | Name=AluSx |
| ADediting_1407122 | chr8_38939138_+ | SINE | Alu | Name=AluSx |
| ADediting_1407123 | chr8_38939166_+ | SINE | Alu | Name=AluSx |
| ADediting_1407124 | chr8_38939814_+ | SINE | Alu | Name=AluJr |
| ADediting_1407125 | chr8_38939884_+ | SINE | Alu | Name=AluJr |
| ADediting_1407126 | chr8_38939904_+ | SINE | Alu | Name=AluJr |
| ADediting_1407127 | chr8_38939974_+ | SINE | Alu | Name=AluJr |
| ADediting_1407128 | chr8_38939984_+ | SINE | Alu | Name=AluJr |
| ADediting_1407129 | chr8_38940087_+ | SINE | Alu | Name=AluJr |
| ADediting_1407130 | chr8_38940140_+ | SINE | Alu | Name=AluSx |
| ADediting_1407131 | chr8_38940211_+ | SINE | Alu | Name=AluSx |
| ADediting_1407132 | chr8_38940212_+ | SINE | Alu | Name=AluSx |
| ADediting_1407133 | chr8_38940222_+ | SINE | Alu | Name=AluSx |
| ADediting_1407134 | chr8_38940227_+ | SINE | Alu | Name=AluSx |
| ADediting_1407135 | chr8_38940252_+ | SINE | Alu | Name=AluSx |
| ADediting_1407136 | chr8_38940256_+ | SINE | Alu | Name=AluSx |
| ADediting_1407137 | chr8_38940278_+ | SINE | Alu | Name=AluSx |
| ADediting_1407138 | chr8_38940279_+ | SINE | Alu | Name=AluSx |
| ADediting_1407139 | chr8_38940305_+ | SINE | Alu | Name=AluSx |
| ADediting_1407140 | chr8_38940311_+ | SINE | Alu | Name=AluSx |
| ADediting_1407141 | chr8_38940348_+ | SINE | Alu | Name=AluSx |
| ADediting_1407142 | chr8_38940349_+ | SINE | Alu | Name=AluSx |
| ADediting_1407143 | chr8_38941113_+ | SINE | Alu | Name=AluSz |
| ADediting_1407144 | chr8_38941126_+ | SINE | Alu | Name=AluSz |
| ADediting_1407145 | chr8_38941137_+ | SINE | Alu | Name=AluSz |
| ADediting_1407146 | chr8_38941157_+ | SINE | Alu | Name=AluSz |
| ADediting_1407147 | chr8_38941182_+ | SINE | Alu | Name=AluSz |
| ADediting_1407148 | chr8_38941186_+ | SINE | Alu | Name=AluSz |
| ADediting_1407149 | chr8_38941196_+ | SINE | Alu | Name=AluSz |
| ADediting_1407150 | chr8_38941253_+ | SINE | Alu | Name=AluSz |
| ADediting_1407151 | chr8_38941261_+ | SINE | Alu | Name=AluSz |
| ADediting_1407152 | chr8_38941278_+ | SINE | Alu | Name=AluSz |
| ADediting_1407153 | chr8_38941318_+ | SINE | Alu | Name=AluSz |
| ADediting_1407154 | chr8_38941321_+ | SINE | Alu | Name=AluSz |
| ADediting_1407155 | chr8_38942144_+ | SINE | Alu | Name=AluJr |
| ADediting_1407156 | chr8_38942173_+ | SINE | Alu | Name=AluJr |
| ADediting_1407157 | chr8_38942182_+ | SINE | Alu | Name=AluJr |
| ADediting_1407158 | chr8_38942192_+ | SINE | Alu | Name=AluJr |
| ADediting_1407159 | chr8_38942203_+ | SINE | Alu | Name=AluJr |
| ADediting_1407160 | chr8_38942216_+ | SINE | Alu | Name=AluJr |
| ADediting_1407161 | chr8_38942220_+ | SINE | Alu | Name=AluJr |
| ADediting_1407162 | chr8_38942252_+ | SINE | Alu | Name=AluJr |
| ADediting_1407163 | chr8_38942257_+ | SINE | Alu | Name=AluJr |
| ADediting_1407164 | chr8_38942277_+ | SINE | Alu | Name=AluJr |
| ADediting_1407165 | chr8_38942283_+ | SINE | Alu | Name=AluJr |
| ADediting_1407166 | chr8_38942296_+ | SINE | Alu | Name=AluJr |
| ADediting_1407167 | chr8_38942318_+ | SINE | Alu | Name=AluJr |
| ADediting_1407168 | chr8_38944257_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407169 | chr8_38947227_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407170 | chr8_38947269_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407171 | chr8_38947286_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407172 | chr8_38947290_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407173 | chr8_38947291_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407174 | chr8_38947295_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407175 | chr8_38947371_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407176 | chr8_38947460_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1407177 | chr8_38947512_+ | SINE | Alu | Name=AluJo |
| ADediting_1407178 | chr8_38947529_+ | SINE | Alu | Name=AluJo |
| ADediting_1407179 | chr8_38947922_+ | SINE | Alu | Name=AluSg |
| ADediting_1407180 | chr8_38947975_+ | SINE | Alu | Name=AluSg |
| ADediting_1407181 | chr8_38947992_+ | SINE | Alu | Name=AluSg |
| ADediting_1407182 | chr8_38947998_+ | SINE | Alu | Name=AluSg |
| ADediting_1407183 | chr8_38948007_+ | SINE | Alu | Name=AluSg |
| ADediting_1407184 | chr8_38948971_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1407185 | chr8_38948988_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1407186 | chr8_38949045_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1407187 | chr8_38949054_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1407188 | chr8_38949063_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1407189 | chr8_38949073_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1407190 | chr8_38949151_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1407191 | chr8_38950111_+ | SINE | Alu | Name=AluJo |
| ADediting_1407192 | chr8_38950141_+ | SINE | Alu | Name=AluJo |
| ADediting_1407193 | chr8_38950142_+ | SINE | Alu | Name=AluJo |
| ADediting_1407194 | chr8_38950154_+ | SINE | Alu | Name=AluJo |
| ADediting_1407195 | chr8_38950269_+ | SINE | Alu | Name=AluJo |
| ADediting_1407196 | chr8_38950295_+ | SINE | Alu | Name=AluJo |
| ADediting_1407197 | chr8_38950308_+ | SINE | Alu | Name=AluJo |
| ADediting_1407198 | chr8_38955880_+ | SINE | Alu | Name=AluJb |
| ADediting_1407199 | chr8_38955904_+ | SINE | Alu | Name=AluJb |
| ADediting_1407200 | chr8_38955910_+ | SINE | Alu | Name=AluJb |
| ADediting_1407201 | chr8_38956562_+ | SINE | Alu | Name=AluJb |
| ADediting_1407202 | chr8_38967935_+ | SINE | Alu | Name=AluSx3 |
| ADediting_1407203 | chr8_38973012_+ | SINE | Alu | Name=AluJb |
| ADediting_1407204 | chr8_38973017_+ | SINE | Alu | Name=AluJb |
| ADediting_1407205 | chr8_38973037_+ | SINE | Alu | Name=AluJb |
| ADediting_1407206 | chr8_38973038_+ | SINE | Alu | Name=AluJb |
| ADediting_1407207 | chr8_38973065_+ | SINE | Alu | Name=AluJb |
| ADediting_1407208 | chr8_38973066_+ | SINE | Alu | Name=AluJb |
| ADediting_1407209 | chr8_38973067_+ | SINE | Alu | Name=AluJb |
| ADediting_1407210 | chr8_38973070_+ | SINE | Alu | Name=AluJb |
| ADediting_1407211 | chr8_38973079_+ | SINE | Alu | Name=AluJb |
| ADediting_1590705 | chr8_38943219_+ | SINE | Alu | Name=AluJo |
| ADediting_1590706 | chr8_38973024_+ | SINE | Alu | Name=AluJb |
| ADediting_1590707 | chr8_38973057_+ | SINE | Alu | Name=AluJb |
| ADediting_1669801 | chr8_38909976_+ | SINE | Alu | Name=AluJb |
| ADediting_1669802 | chr8_38912130_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1669808 | chr8_38942163_+ | SINE | Alu | Name=AluJr |
| ADediting_1669809 | chr8_38942206_+ | SINE | Alu | Name=AluJr |
| ADediting_1669810 | chr8_38950171_+ | SINE | Alu | Name=AluJo |
| ADediting_1669811 | chr8_38950217_+ | SINE | Alu | Name=AluJo |
Top |
RNA A-to-I editing events in the alternative splicing sites for PLEKHA2 |
RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PLEKHA2 |
Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.* The grey color means N/A. |
Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for PLEKHA2 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for PLEKHA2 |
RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1407206 | chr8_38973038_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-1199-5p | chr8 | 38973031 | 38973037 | 7mer-m8 | 38973019 | 38973038 | 156 | -30.6 |
| ADediting_1407206 | chr8_38973038_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-3622a-3p | chr8 | 38973034 | 38973041 | 8mer-1a | 38973020 | 38973041 | 148 | -20.1 |
| ADediting_1407206 | chr8_38973038_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-3622b-3p | chr8 | 38973034 | 38973041 | 8mer-1a | 38973021 | 38973041 | 157 | -25.13 |
| ADediting_1407206 | chr8_38973038_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-6751-3p | chr8 | 38973031 | 38973037 | 7mer-m8 | 38973018 | 38973038 | 141 | -20.49 |
| ADediting_1407207 | chr8_38973065_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-6771-5p | chr8 | 38973059 | 38973066 | 8mer-1a | 38973045 | 38973066 | 164 | -29.28 |
| ADediting_1407208 | chr8_38973066_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-326 | chr8 | 38973061 | 38973067 | 7mer-m8 | 38973049 | 38973068 | 140 | -13.25 |
| ADediting_1407208 | chr8_38973066_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-330-5p | chr8 | 38973061 | 38973067 | 7mer-m8 | 38973045 | 38973068 | 151 | -27.84 |
| ADediting_1407208 | chr8_38973066_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-4314 | chr8 | 38973060 | 38973066 | 7mer-m8 | 38973049 | 38973067 | 142 | -18.35 |
| ADediting_1407208 | chr8_38973066_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-514a-5p | chr8 | 38973062 | 38973069 | 8mer-1a | 38973046 | 38973069 | 148 | -19.8 |
| ADediting_1407209 | chr8_38973067_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-3189-3p | chr8 | 38973061 | 38973067 | 7mer-m8 | 38973047 | 38973068 | 152 | -28.85 |
| ADediting_1407209 | chr8_38973067_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-6813-3p | chr8 | 38973062 | 38973069 | 8mer-1a | 38973049 | 38973069 | 140 | -10.65 |
| ADediting_1590706 | chr8_38973024_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-5008-5p | chr8 | 38973021 | 38973027 | 7mer-m8 | 38973009 | 38973028 | 149 | -26.72 |
| ADediting_1590707 | chr8_38973057_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-6089 | chr8 | 38973055 | 38973061 | 7mer-m8 | 38973042 | 38973062 | 161 | -37.24 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1407203 | chr8_38973012_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-6807-5p | chr8 | 38973005 | 38973011 | 7mer-m8 | 38972992 | 38973012 | 143 | -20.22 |
| ADediting_1407204 | chr8_38973017_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-17-3p | chr8 | 38973011 | 38973017 | 7mer-m8 | 38972998 | 38973018 | 153 | -19.61 |
| ADediting_1407207 | chr8_38973065_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-1273h-5p | chr8 | 38973058 | 38973065 | 8mer-1a | 38973043 | 38973065 | 146 | -20 |
| ADediting_1407207 | chr8_38973065_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-30b-3p | chr8 | 38973058 | 38973065 | 8mer-1a | 38973042 | 38973065 | 145 | -15.74 |
| ADediting_1407207 | chr8_38973065_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-6779-5p | chr8 | 38973058 | 38973065 | 8mer-1a | 38973045 | 38973065 | 147 | -20.67 |
| ADediting_1407207 | chr8_38973065_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-6780a-5p | chr8 | 38973058 | 38973065 | 8mer-1a | 38973040 | 38973065 | 147 | -22.79 |
| ADediting_1590707 | chr8_38973057_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-4677-3p | chr8 | 38973051 | 38973057 | 7mer-m8 | 38973036 | 38973058 | 149 | -16.29 |
| ADediting_1590707 | chr8_38973057_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-485-5p | chr8 | 38973055 | 38973061 | 7mer-m8 | 38973041 | 38973062 | 147 | -15.37 |
| ADediting_1590707 | chr8_38973057_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-6884-5p | chr8 | 38973055 | 38973061 | 7mer-m8 | 38973040 | 38973062 | 150 | -18.81 |
| ADediting_1590707 | chr8_38973057_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-7974 | chr8 | 38973053 | 38973059 | 7mer-m8 | 38973030 | 38973060 | 153 | -30.24 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1391023 | chr8_140732605_- | ENSG00000169499.15 | ENST00000616834.1 | PLEKHA2-207 | hsa-miR-151a-3p | chr8 | 38970196 | 38970202 | 7mer-m8 | 38970183 | 38970203 | 151 | -21.52 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000169499.15 | ENST00000616927.4 | PLEKHA2-208 | hsa-miR-151a-3p | chr8 | 38970196 | 38970202 | 7mer-m8 | 38970183 | 38970203 | 151 | -21.52 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-151a-3p | chr8 | 38970196 | 38970202 | 7mer-m8 | 38970183 | 38970203 | 151 | -21.52 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000169499.15 | ENST00000521746.5 | PLEKHA2-206 | hsa-miR-4477b | chr8 | 38970932 | 38970939 | 8mer-1a | 38970917 | 38970939 | 151 | -12.95 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000169499.15 | ENST00000616834.1 | PLEKHA2-207 | hsa-miR-4477b | chr8 | 38970932 | 38970939 | 8mer-1a | 38970917 | 38970939 | 151 | -12.95 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-4477b | chr8 | 38970932 | 38970939 | 8mer-1a | 38970917 | 38970939 | 151 | -12.95 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000169499.15 | ENST00000616834.1 | PLEKHA2-207 | hsa-miR-381-3p | chr8 | 38970328 | 38970334 | 7mer-m8 | 38970312 | 38970335 | 150 | -16.69 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-381-3p | chr8 | 38970328 | 38970334 | 7mer-m8 | 38970312 | 38970335 | 150 | -16.69 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000169499.15 | ENST00000521746.5 | PLEKHA2-206 | hsa-miR-641 | chr8 | 38971590 | 38971596 | 7mer-m8 | 38971571 | 38971597 | 143 | -16.88 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000169499.15 | ENST00000616834.1 | PLEKHA2-207 | hsa-miR-641 | chr8 | 38971590 | 38971596 | 7mer-m8 | 38971571 | 38971597 | 143 | -16.88 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-641 | chr8 | 38971590 | 38971596 | 7mer-m8 | 38971571 | 38971597 | 143 | -16.88 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-5688 | chr8 | 38973559 | 38973566 | 8mer-1a | 38973547 | 38973566 | 147 | -15.47 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000169499.15 | ENST00000616834.1 | PLEKHA2-207 | hsa-miR-151a-3p | chr8 | 38970238 | 38970244 | 7mer-1a | 38970224 | 38970244 | 141 | -13.7 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-151a-3p | chr8 | 38970238 | 38970244 | 7mer-1a | 38970224 | 38970244 | 141 | -13.7 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000169499.15 | ENST00000616834.1 | PLEKHA2-207 | hsa-miR-4775 | chr8 | 38970645 | 38970651 | 7mer-m8 | 38970631 | 38970652 | 146 | -5.05 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-4775 | chr8 | 38970645 | 38970651 | 7mer-m8 | 38970631 | 38970652 | 146 | -5.05 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000169499.15 | ENST00000521746.5 | PLEKHA2-206 | hsa-miR-5585-3p | chr8 | 38971222 | 38971228 | 7mer-m8 | 38971204 | 38971229 | 151 | -14.01 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000169499.15 | ENST00000521746.5 | PLEKHA2-206 | hsa-miR-5585-3p | chr8 | 38971498 | 38971505 | 8mer-1a | 38971484 | 38971505 | 154 | -11.36 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000169499.15 | ENST00000616834.1 | PLEKHA2-207 | hsa-miR-5585-3p | chr8 | 38971222 | 38971228 | 7mer-m8 | 38971204 | 38971229 | 151 | -14.01 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000169499.15 | ENST00000616834.1 | PLEKHA2-207 | hsa-miR-5585-3p | chr8 | 38971498 | 38971505 | 8mer-1a | 38971484 | 38971505 | 154 | -11.36 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-5585-3p | chr8 | 38971222 | 38971228 | 7mer-m8 | 38971204 | 38971229 | 151 | -14.01 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-5585-3p | chr8 | 38971498 | 38971505 | 8mer-1a | 38971484 | 38971505 | 154 | -11.36 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000169499.15 | ENST00000521746.5 | PLEKHA2-206 | hsa-miR-5585-3p | chr8 | 38971222 | 38971228 | 7mer-m8 | 38971204 | 38971229 | 151 | -14.01 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000169499.15 | ENST00000521746.5 | PLEKHA2-206 | hsa-miR-5585-3p | chr8 | 38971498 | 38971505 | 8mer-1a | 38971484 | 38971505 | 154 | -11.36 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000169499.15 | ENST00000616834.1 | PLEKHA2-207 | hsa-miR-5585-3p | chr8 | 38971222 | 38971228 | 7mer-m8 | 38971204 | 38971229 | 151 | -14.01 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000169499.15 | ENST00000616834.1 | PLEKHA2-207 | hsa-miR-5585-3p | chr8 | 38971498 | 38971505 | 8mer-1a | 38971484 | 38971505 | 154 | -11.36 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-5585-3p | chr8 | 38971222 | 38971228 | 7mer-m8 | 38971204 | 38971229 | 151 | -14.01 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000169499.15 | ENST00000617275.5 | PLEKHA2-209 | hsa-miR-5585-3p | chr8 | 38971498 | 38971505 | 8mer-1a | 38971484 | 38971505 | 154 | -11.36 |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for PLEKHA2 |
- RNA A-to-I editing in mRNA.* Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000617275.5 | protein_coding | ![]() | ![]() |
RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1407203 | ENST00000617275.5 | chr8_38973012_+ | 4630 | -1955.40 | -1955.80 | -1950.20 |
| ADediting_1407204 | ENST00000617275.5 | chr8_38973017_+ | 4635 | -1955.00 | -1955.80 | -1950.20 |
| ADediting_1590706 | ENST00000617275.5 | chr8_38973024_+ | 4642 | -1955.90 | -1955.80 | -1950.20 |
| ADediting_1407205 | ENST00000617275.5 | chr8_38973037_+ | 4655 | -1955.50 | -1955.80 | -1950.20 |
| ADediting_1407206 | ENST00000617275.5 | chr8_38973038_+ | 4656 | -1955.50 | -1955.80 | -1950.20 |
| ADediting_1590707 | ENST00000617275.5 | chr8_38973057_+ | 4675 | -1955.80 | -1955.80 | -1950.20 |
| ADediting_1407207 | ENST00000617275.5 | chr8_38973065_+ | 4683 | -1955.50 | -1955.80 | -1950.20 |
| ADediting_1407208 | ENST00000617275.5 | chr8_38973066_+ | 4684 | -1955.90 | -1955.80 | -1950.20 |
| ADediting_1407209 | ENST00000617275.5 | chr8_38973067_+ | 4685 | -1955.50 | -1955.80 | -1950.20 |
| ADediting_1407210 | ENST00000617275.5 | chr8_38973070_+ | 4688 | -1955.80 | -1955.80 | -1950.20 |
| ADediting_1407211 | ENST00000617275.5 | chr8_38973079_+ | 4697 | -1952.80 | -1955.80 | -1950.20 |
RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for PLEKHA2 |
Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1407141 | chr8_38940348_+ | 0.886644535286514 | 0.00812907741414201 | 0.286940029618838 | -0.0606692523120474 | 1.43215362384986e-11 | 0.371332887483882 |
| DLPFC | ADediting_1407142 | chr8_38940349_+ | 0.995122026767545 | 0.000348641592343758 | 0.102834687081095 | -0.0928244076653266 | 1.44697791745388e-14 | 0.418371669022382 |
| DLPFC | ADediting_1407151 | chr8_38941261_+ | 0.637987058890938 | 0.0268270254497548 | 0.21638369379801 | -0.0704087924083529 | 5.24610276043994e-16 | 0.438605846675842 |
| CER | ADediting_1407204 | chr8_38973017_+ | 0.0594978212055137 | 0.154236733288744 | 0.0833682247574578 | 0.141844689240112 | 2.2489117172633e-05 | 0.338634017815236 |
| TCX | ADediting_1407204 | chr8_38973017_+ | 5.4985487350005e-05 | 0.323145763124341 | 0.0382576489551061 | 0.169377413987349 | 0.860022815312061 | -0.0145192201276824 |
| CER | ADediting_1407206 | chr8_38973038_+ | 7.4763410024162e-05 | 0.317623589994456 | 0.000510674041092592 | 0.280372840211729 | 0.000607557941643919 | 0.276740600582233 |
| STG | ADediting_1407206 | chr8_38973038_+ | 0.00416418433623131 | 0.309565694383193 | 1.82353774667283e-05 | 0.449145312211153 | 0.100744700894498 | -0.180306218427032 |
Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 6.98858763161124e-87 | 0.84790102662381 | 1.58397332142183e-48 | 0.70841035849579 | 3.84868057462739e-13 | 0.396924018792621 |
| AC | 1.00639364290051e-64 | 0.829656580627223 | 4.34262844542117e-66 | 0.834336336675928 | 0.461180693601081 | 0.0468149596780671 |
| PCC | 2.86884736577128e-72 | 0.905469001784668 | 6.0414236121584e-74 | 0.909437354888342 | 0.0261062075414383 | 0.160973896407381 |
| CER | 7.33375427553772e-13 | 0.542644755084948 | 8.20324382385373e-05 | 0.315934679265815 | 1.65989020225879e-07 | 0.411684033632743 |
| TCX | 5.60663295362575e-42 | 0.844514159250987 | 1.44548884599373e-24 | 0.712802921656929 | 0.248596997573016 | -0.0947850835751534 |
| FP | 2.32351598538164e-29 | 0.716749535066016 | 2.88295944638928e-35 | 0.763588049030415 | 0.00506689895891037 | 0.209218931161451 |
| IFG | 7.96700785218592e-08 | 0.849248149457509 | 1.66000469623557e-08 | 0.869663350905297 | 0.301233355834794 | 0.21534477084024 |
| PG | 4.98267577551194e-54 | 0.85370561766161 | 7.89997355898575e-38 | 0.770498632892599 | 0.978321996989819 | 0.00200591891964748 |
| STG | 1.12398083896619e-21 | 0.821175309449562 | 7.51798483427947e-15 | 0.72360875101069 | 0.216890492916599 | 0.136143582064645 |
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Relation with AD stages for PLEKHA2 |
Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 0.000190469010937187 | 0.351604182101009 |
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RelatedDrugs for PLEKHA2 |
Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PLEKHA2 |
Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |