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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for CACNG7 |
 Gene summary |
| Gene information | Gene symbol | CACNG7 | Gene ID | 59284 |
| Gene name | calcium voltage-gated channel auxiliary subunit gamma 7 | |
| Synonyms | - | |
| Cytomap | 19q13.42 | |
| Type of gene | protein-coding | |
| Description | voltage-dependent calcium channel gamma-7 subunitTARP gamma-7calcium channel, voltage-dependent, gamma subunit 7neuronal voltage-gated calcium channel gamma-7 subunittransmembrane AMPAR regulatory protein gamma-7 | |
| Modification date | 20200313 | |
| UniProtAcc | P62955, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| CACNG7 | GO:2000311 | regulation of AMPA receptor activity | 21172611 |
Top |
RNA A-to-I events for CACNG7 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_781931(53918944, +), ADediting_781932(53918953, +), ADediting_781933(53918975, +), ADediting_781934(53926663, +), ADediting_781935(53926755, +), ADediting_781936(53926757, +), ADediting_781937(53926790, +), ADediting_781938(53926792, +), ADediting_781939(53926798, +), ADediting_781940(53926802, +), ADediting_781941(53926828, +), ADediting_781942(53926857, +), ADediting_781943(53926862, +), ADediting_781944(53926895, +), ADediting_781945(53926898, +), ADediting_781946(53926901, +), ADediting_781947(53927014, +), ADediting_781948(53927049, +), ADediting_781949(53927059, +), ADediting_781950(53927061, +), ADediting_781951(53927103, +), ADediting_781952(53927129, +), ADediting_781953(53927142, +), ADediting_781954(53927154, +), ADediting_781955(53927155, +), ADediting_781956(53927180, +), ADediting_781957(53927182, +), ADediting_781958(53927194, +), ADediting_781959(53927583, +), ADediting_781960(53927588, +), ADediting_781961(53927639, +), ADediting_781962(53927647, +), ADediting_781963(53928291, +), ADediting_781964(53928295, +), ADediting_781965(53928328, +), ADediting_781966(53928335, +), ADediting_781967(53928352, +), ADediting_781968(53928358, +), ADediting_781969(53928375, +), ADediting_781970(53928376, +), ADediting_781971(53928411, +), ADediting_781972(53928414, +), ADediting_781973(53928537, +), ADediting_781974(53928544, +), ADediting_781975(53928549, +), ADediting_781976(53928842, +), ADediting_781977(53928856, +), ADediting_781978(53928861, +), ADediting_781979(53929002, +), ADediting_781980(53929024, +), ADediting_781981(53929041, +), ADediting_781982(53929072, +), ADediting_781983(53929476, +), ADediting_781984(53929478, +), ADediting_781985(53929543, +), ADediting_781986(53929550, +), ADediting_781987(53929596, +), ADediting_781988(53929637, +), ADediting_781989(53929640, +), ADediting_781990(53929654, +), ADediting_781991(53929705, +), ADediting_781992(53930288, +), ADediting_781993(53930309, +), ADediting_781994(53930338, +), ADediting_781995(53930342, +), ADediting_781996(53930364, +), ADediting_781997(53930428, +), ADediting_781998(53930443, +), ADediting_781999(53930466, +), ADediting_782000(53930502, +), ADediting_782001(53930514, +), ADediting_782002(53930538, +), ADediting_782003(53930555, +), ADediting_782004(53930572, +), ADediting_782005(53930580, +), ADediting_782006(53930584, +), ADediting_782007(53930597, +), ADediting_782008(53930635, +), ADediting_782009(53930742, +), ADediting_782010(53930996, +), ADediting_782011(53930997, +), ADediting_782012(53931010, +), ADediting_782013(53931017, +), ADediting_782014(53931075, +), ADediting_782015(53931089, +), ADediting_782016(53931121, +), ADediting_782017(53931140, +), ADediting_782018(53931141, +), ADediting_782019(53931159, +), ADediting_782020(53931415, +), ADediting_782021(53931429, +), ADediting_782022(53931437, +), ADediting_782023(53931477, +), ADediting_782024(53931491, +), ADediting_782025(53931541, +), ADediting_782026(53931613, +), ADediting_782027(53931662, +), ADediting_782028(53931842, +), ADediting_782029(53931891, +), ADediting_782030(53931901, +), ADediting_782031(53931903, +), ADediting_782032(53931943, +), ADediting_782033(53931968, +), ADediting_782034(53932022, +), ADediting_782035(53932111, +), ADediting_782036(53932132, +), ADediting_782037(53932162, +), ADediting_782038(53932165, +), ADediting_782039(53932175, +), ADediting_782040(53932179, +), ADediting_782041(53932211, +), ADediting_782042(53933171, +), ADediting_782043(53933380, +), ADediting_782044(53933429, +), ADediting_782045(53933954, +), ADediting_782046(53933962, +), ADediting_782047(53933977, +), ADediting_782048(53933978, +), ADediting_782049(53933998, +), ADediting_782050(53933999, +), ADediting_782051(53934002, +), ADediting_782052(53934023, +), ADediting_782053(53934027, +), ADediting_782054(53934037, +), ADediting_782055(53934102, +), ADediting_782056(53934497, +), ADediting_782057(53934528, +), ADediting_782058(53934547, +), ADediting_782059(53934566, +), ADediting_782060(53934626, +), ADediting_782061(53934630, +), ADediting_782062(53934658, +), ADediting_782063(53934662, +), ADediting_782064(53934693, +), ADediting_782065(53934698, +), ADediting_782066(53934714, +), ADediting_782067(53934728, +), ADediting_782068(53934768, +), ADediting_782069(53935387, +), ADediting_782070(53935403, +), ADediting_782071(53935423, +), ADediting_782072(53935440, +), ADediting_782073(53935449, +), ADediting_782074(53935462, +), ADediting_782075(53935506, +), ADediting_782076(53935513, +), ADediting_782077(53935551, +), ADediting_782078(53935575, +), ADediting_782079(53936628, +), ADediting_782080(53936640, +), ADediting_782081(53936683, +), ADediting_782082(53936689, +), ADediting_782083(53936709, +), ADediting_782084(53936712, +), ADediting_782085(53936713, +), ADediting_782086(53936734, +), ADediting_782087(53936829, +), ADediting_782088(53936843, +), ADediting_782089(53936844, +), ADediting_782090(53936883, +), ADediting_782091(53936889, +), ADediting_782092(53936977, +), ADediting_782093(53937001, +), ADediting_782094(53937033, +), ADediting_782095(53937087, +), ADediting_782096(53937125, +), ADediting_782097(53937671, +), ADediting_782098(53937691, +), ADediting_782099(53937720, +), ADediting_782100(53937730, +), ADediting_782101(53937752, +), ADediting_782102(53937774, +), ADediting_782103(53937800, +), ADediting_782104(53937811, +), ADediting_782105(53937865, +), ADediting_782106(53937873, +), ADediting_782107(53938091, +), ADediting_782108(53938092, +), ADediting_782109(53938114, +), ADediting_782110(53938137, +), ADediting_782111(53938140, +), ADediting_782112(53938146, +), ADediting_782113(53938151, +), ADediting_782114(53938161, +), ADediting_782115(53938163, +), ADediting_782116(53938182, +), ADediting_782117(53938196, +), ADediting_782118(53938197, +), ADediting_782119(53938201, +), ADediting_782120(53938209, +), ADediting_782121(53938257, +), ADediting_782122(53938268, +), ADediting_782123(53938309, +), ADediting_782124(53938674, +), ADediting_782125(53938676, +), ADediting_782126(53938801, +), ADediting_782127(53938840, +), ADediting_782128(53938863, +), ADediting_782129(53938868, +), ADediting_782130(53938877, +), ADediting_782131(53939002, +), ADediting_782132(53939041, +), ADediting_782133(53939080, +), ADediting_782134(53939092, +), ADediting_782135(53939095, +), ADediting_782136(53939104, +), ADediting_782137(53939110, +), ADediting_782138(53939114, +), ADediting_782139(53939138, +), ADediting_782140(53939143, +), ADediting_782141(53939151, +), ADediting_782142(53939221, +), ADediting_782143(53939233, +), ADediting_782144(53940914, +), ADediting_782145(53940940, +), ADediting_782146(53940982, +), ADediting_1559007(53926893, +), ADediting_1559008(53933984, +), ADediting_1559009(53934039, +), ADediting_1559010(53934171, +), ADediting_1559011(53935378, +), ADediting_1559012(53935452, +), ADediting_1559013(53935512, +), ADediting_1559014(53936878, +), ADediting_1559015(53936929, +), ADediting_1559016(53938169, +), ADediting_1559017(53938190, +), ADediting_1559018(53938219, +), ADediting_1559019(53938727, +), ADediting_1559020(53938897, +), ADediting_1559021(53940996, +), |
Top |
RNA editing positional annotations for CACNG7 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_781931 | chr19_53918944_+ | intronic |
| ADediting_781932 | chr19_53918953_+ | intronic |
| ADediting_781933 | chr19_53918975_+ | intronic |
| ADediting_781934 | chr19_53926663_+ | intronic |
| ADediting_781935 | chr19_53926755_+ | intronic |
| ADediting_781936 | chr19_53926757_+ | intronic |
| ADediting_781937 | chr19_53926790_+ | intronic |
| ADediting_781938 | chr19_53926792_+ | intronic |
| ADediting_781939 | chr19_53926798_+ | intronic |
| ADediting_781940 | chr19_53926802_+ | intronic |
| ADediting_781941 | chr19_53926828_+ | intronic |
| ADediting_781942 | chr19_53926857_+ | intronic |
| ADediting_781943 | chr19_53926862_+ | intronic |
| ADediting_781944 | chr19_53926895_+ | intronic |
| ADediting_781945 | chr19_53926898_+ | intronic |
| ADediting_781946 | chr19_53926901_+ | intronic |
| ADediting_781947 | chr19_53927014_+ | intronic |
| ADediting_781948 | chr19_53927049_+ | intronic |
| ADediting_781949 | chr19_53927059_+ | intronic |
| ADediting_781950 | chr19_53927061_+ | intronic |
| ADediting_781951 | chr19_53927103_+ | intronic |
| ADediting_781952 | chr19_53927129_+ | intronic |
| ADediting_781953 | chr19_53927142_+ | intronic |
| ADediting_781954 | chr19_53927154_+ | intronic |
| ADediting_781955 | chr19_53927155_+ | intronic |
| ADediting_781956 | chr19_53927180_+ | intronic |
| ADediting_781957 | chr19_53927182_+ | intronic |
| ADediting_781958 | chr19_53927194_+ | intronic |
| ADediting_781959 | chr19_53927583_+ | intronic |
| ADediting_781960 | chr19_53927588_+ | intronic |
| ADediting_781961 | chr19_53927639_+ | intronic |
| ADediting_781962 | chr19_53927647_+ | intronic |
| ADediting_781963 | chr19_53928291_+ | intronic |
| ADediting_781964 | chr19_53928295_+ | intronic |
| ADediting_781965 | chr19_53928328_+ | intronic |
| ADediting_781966 | chr19_53928335_+ | intronic |
| ADediting_781967 | chr19_53928352_+ | intronic |
| ADediting_781968 | chr19_53928358_+ | intronic |
| ADediting_781969 | chr19_53928375_+ | intronic |
| ADediting_781970 | chr19_53928376_+ | intronic |
| ADediting_781971 | chr19_53928411_+ | intronic |
| ADediting_781972 | chr19_53928414_+ | intronic |
| ADediting_781973 | chr19_53928537_+ | intronic |
| ADediting_781974 | chr19_53928544_+ | intronic |
| ADediting_781975 | chr19_53928549_+ | intronic |
| ADediting_781976 | chr19_53928842_+ | intronic |
| ADediting_781977 | chr19_53928856_+ | intronic |
| ADediting_781978 | chr19_53928861_+ | intronic |
| ADediting_781979 | chr19_53929002_+ | intronic |
| ADediting_781980 | chr19_53929024_+ | intronic |
| ADediting_781981 | chr19_53929041_+ | intronic |
| ADediting_781982 | chr19_53929072_+ | intronic |
| ADediting_781983 | chr19_53929476_+ | intronic |
| ADediting_781984 | chr19_53929478_+ | intronic |
| ADediting_781985 | chr19_53929543_+ | intronic |
| ADediting_781986 | chr19_53929550_+ | intronic |
| ADediting_781987 | chr19_53929596_+ | intronic |
| ADediting_781988 | chr19_53929637_+ | intronic |
| ADediting_781989 | chr19_53929640_+ | intronic |
| ADediting_781990 | chr19_53929654_+ | intronic |
| ADediting_781991 | chr19_53929705_+ | intronic |
| ADediting_781992 | chr19_53930288_+ | intronic |
| ADediting_781993 | chr19_53930309_+ | intronic |
| ADediting_781994 | chr19_53930338_+ | intronic |
| ADediting_781995 | chr19_53930342_+ | intronic |
| ADediting_781996 | chr19_53930364_+ | intronic |
| ADediting_781997 | chr19_53930428_+ | intronic |
| ADediting_781998 | chr19_53930443_+ | intronic |
| ADediting_781999 | chr19_53930466_+ | intronic |
| ADediting_782000 | chr19_53930502_+ | intronic |
| ADediting_782001 | chr19_53930514_+ | intronic |
| ADediting_782002 | chr19_53930538_+ | intronic |
| ADediting_782003 | chr19_53930555_+ | intronic |
| ADediting_782004 | chr19_53930572_+ | intronic |
| ADediting_782005 | chr19_53930580_+ | intronic |
| ADediting_782006 | chr19_53930584_+ | intronic |
| ADediting_782007 | chr19_53930597_+ | intronic |
| ADediting_782008 | chr19_53930635_+ | intronic |
| ADediting_782009 | chr19_53930742_+ | intronic |
| ADediting_782010 | chr19_53930996_+ | intronic |
| ADediting_782011 | chr19_53930997_+ | intronic |
| ADediting_782012 | chr19_53931010_+ | intronic |
| ADediting_782013 | chr19_53931017_+ | intronic |
| ADediting_782014 | chr19_53931075_+ | intronic |
| ADediting_782015 | chr19_53931089_+ | intronic |
| ADediting_782016 | chr19_53931121_+ | intronic |
| ADediting_782017 | chr19_53931140_+ | intronic |
| ADediting_782018 | chr19_53931141_+ | intronic |
| ADediting_782019 | chr19_53931159_+ | intronic |
| ADediting_782020 | chr19_53931415_+ | intronic |
| ADediting_782021 | chr19_53931429_+ | intronic |
| ADediting_782022 | chr19_53931437_+ | intronic |
| ADediting_782023 | chr19_53931477_+ | intronic |
| ADediting_782024 | chr19_53931491_+ | intronic |
| ADediting_782025 | chr19_53931541_+ | intronic |
| ADediting_782026 | chr19_53931613_+ | intronic |
| ADediting_782027 | chr19_53931662_+ | intronic |
| ADediting_782028 | chr19_53931842_+ | intronic |
| ADediting_782029 | chr19_53931891_+ | intronic |
| ADediting_782030 | chr19_53931901_+ | intronic |
| ADediting_782031 | chr19_53931903_+ | intronic |
| ADediting_782032 | chr19_53931943_+ | intronic |
| ADediting_782033 | chr19_53931968_+ | intronic |
| ADediting_782034 | chr19_53932022_+ | intronic |
| ADediting_782035 | chr19_53932111_+ | intronic |
| ADediting_782036 | chr19_53932132_+ | intronic |
| ADediting_782037 | chr19_53932162_+ | intronic |
| ADediting_782038 | chr19_53932165_+ | intronic |
| ADediting_782039 | chr19_53932175_+ | intronic |
| ADediting_782040 | chr19_53932179_+ | intronic |
| ADediting_782041 | chr19_53932211_+ | intronic |
| ADediting_782042 | chr19_53933171_+ | intronic |
| ADediting_782043 | chr19_53933380_+ | intronic |
| ADediting_782044 | chr19_53933429_+ | intronic |
| ADediting_782045 | chr19_53933954_+ | intronic |
| ADediting_782046 | chr19_53933962_+ | intronic |
| ADediting_782047 | chr19_53933977_+ | intronic |
| ADediting_782048 | chr19_53933978_+ | intronic |
| ADediting_782049 | chr19_53933998_+ | intronic |
| ADediting_782050 | chr19_53933999_+ | intronic |
| ADediting_782051 | chr19_53934002_+ | intronic |
| ADediting_782052 | chr19_53934023_+ | intronic |
| ADediting_782053 | chr19_53934027_+ | intronic |
| ADediting_782054 | chr19_53934037_+ | intronic |
| ADediting_782055 | chr19_53934102_+ | intronic |
| ADediting_782056 | chr19_53934497_+ | intronic |
| ADediting_782057 | chr19_53934528_+ | intronic |
| ADediting_782058 | chr19_53934547_+ | intronic |
| ADediting_782059 | chr19_53934566_+ | intronic |
| ADediting_782060 | chr19_53934626_+ | intronic |
| ADediting_782061 | chr19_53934630_+ | intronic |
| ADediting_782062 | chr19_53934658_+ | intronic |
| ADediting_782063 | chr19_53934662_+ | intronic |
| ADediting_782064 | chr19_53934693_+ | intronic |
| ADediting_782065 | chr19_53934698_+ | intronic |
| ADediting_782066 | chr19_53934714_+ | intronic |
| ADediting_782067 | chr19_53934728_+ | intronic |
| ADediting_782068 | chr19_53934768_+ | intronic |
| ADediting_782069 | chr19_53935387_+ | intronic |
| ADediting_782070 | chr19_53935403_+ | intronic |
| ADediting_782071 | chr19_53935423_+ | intronic |
| ADediting_782072 | chr19_53935440_+ | intronic |
| ADediting_782073 | chr19_53935449_+ | intronic |
| ADediting_782074 | chr19_53935462_+ | intronic |
| ADediting_782075 | chr19_53935506_+ | intronic |
| ADediting_782076 | chr19_53935513_+ | intronic |
| ADediting_782077 | chr19_53935551_+ | intronic |
| ADediting_782078 | chr19_53935575_+ | intronic |
| ADediting_782079 | chr19_53936628_+ | intronic |
| ADediting_782080 | chr19_53936640_+ | intronic |
| ADediting_782081 | chr19_53936683_+ | intronic |
| ADediting_782082 | chr19_53936689_+ | intronic |
| ADediting_782083 | chr19_53936709_+ | intronic |
| ADediting_782084 | chr19_53936712_+ | intronic |
| ADediting_782085 | chr19_53936713_+ | intronic |
| ADediting_782086 | chr19_53936734_+ | intronic |
| ADediting_782087 | chr19_53936829_+ | intronic |
| ADediting_782088 | chr19_53936843_+ | intronic |
| ADediting_782089 | chr19_53936844_+ | intronic |
| ADediting_782090 | chr19_53936883_+ | intronic |
| ADediting_782091 | chr19_53936889_+ | intronic |
| ADediting_782092 | chr19_53936977_+ | intronic |
| ADediting_782093 | chr19_53937001_+ | intronic |
| ADediting_782094 | chr19_53937033_+ | intronic |
| ADediting_782095 | chr19_53937087_+ | intronic |
| ADediting_782096 | chr19_53937125_+ | intronic |
| ADediting_782097 | chr19_53937671_+ | intronic |
| ADediting_782098 | chr19_53937691_+ | intronic |
| ADediting_782099 | chr19_53937720_+ | intronic |
| ADediting_782100 | chr19_53937730_+ | intronic |
| ADediting_782101 | chr19_53937752_+ | intronic |
| ADediting_782102 | chr19_53937774_+ | intronic |
| ADediting_782103 | chr19_53937800_+ | intronic |
| ADediting_782104 | chr19_53937811_+ | intronic |
| ADediting_782105 | chr19_53937865_+ | intronic |
| ADediting_782106 | chr19_53937873_+ | intronic |
| ADediting_782107 | chr19_53938091_+ | intronic |
| ADediting_782108 | chr19_53938092_+ | intronic |
| ADediting_782109 | chr19_53938114_+ | intronic |
| ADediting_782110 | chr19_53938137_+ | intronic |
| ADediting_782111 | chr19_53938140_+ | intronic |
| ADediting_782112 | chr19_53938146_+ | intronic |
| ADediting_782113 | chr19_53938151_+ | intronic |
| ADediting_782114 | chr19_53938161_+ | intronic |
| ADediting_782115 | chr19_53938163_+ | intronic |
| ADediting_782116 | chr19_53938182_+ | intronic |
| ADediting_782117 | chr19_53938196_+ | intronic |
| ADediting_782118 | chr19_53938197_+ | intronic |
| ADediting_782119 | chr19_53938201_+ | intronic |
| ADediting_782120 | chr19_53938209_+ | intronic |
| ADediting_782121 | chr19_53938257_+ | intronic |
| ADediting_782122 | chr19_53938268_+ | intronic |
| ADediting_782123 | chr19_53938309_+ | intronic |
| ADediting_782124 | chr19_53938674_+ | intronic |
| ADediting_782125 | chr19_53938676_+ | intronic |
| ADediting_782126 | chr19_53938801_+ | intronic |
| ADediting_782127 | chr19_53938840_+ | intronic |
| ADediting_782128 | chr19_53938863_+ | intronic |
| ADediting_782129 | chr19_53938868_+ | intronic |
| ADediting_782130 | chr19_53938877_+ | intronic |
| ADediting_782131 | chr19_53939002_+ | intronic |
| ADediting_782132 | chr19_53939041_+ | intronic |
| ADediting_782133 | chr19_53939080_+ | intronic |
| ADediting_782134 | chr19_53939092_+ | intronic |
| ADediting_782135 | chr19_53939095_+ | intronic |
| ADediting_782136 | chr19_53939104_+ | intronic |
| ADediting_782137 | chr19_53939110_+ | intronic |
| ADediting_782138 | chr19_53939114_+ | intronic |
| ADediting_782139 | chr19_53939138_+ | intronic |
| ADediting_782140 | chr19_53939143_+ | intronic |
| ADediting_782141 | chr19_53939151_+ | intronic |
| ADediting_782142 | chr19_53939221_+ | intronic |
| ADediting_782143 | chr19_53939233_+ | intronic |
| ADediting_782144 | chr19_53940914_+ | intronic |
| ADediting_782145 | chr19_53940940_+ | intronic |
| ADediting_782146 | chr19_53940982_+ | intronic |
| ADediting_1559007 | chr19_53926893_+ | intronic |
| ADediting_1559008 | chr19_53933984_+ | intronic |
| ADediting_1559009 | chr19_53934039_+ | intronic |
| ADediting_1559010 | chr19_53934171_+ | intronic |
| ADediting_1559011 | chr19_53935378_+ | intronic |
| ADediting_1559012 | chr19_53935452_+ | intronic |
| ADediting_1559013 | chr19_53935512_+ | intronic |
| ADediting_1559014 | chr19_53936878_+ | intronic |
| ADediting_1559015 | chr19_53936929_+ | intronic |
| ADediting_1559016 | chr19_53938169_+ | intronic |
| ADediting_1559017 | chr19_53938190_+ | intronic |
| ADediting_1559018 | chr19_53938219_+ | intronic |
| ADediting_1559019 | chr19_53938727_+ | intronic |
| ADediting_1559020 | chr19_53938897_+ | intronic |
| ADediting_1559021 | chr19_53940996_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_781931 | chr19_53918944_+ | SINE | Alu | Name=AluSq2 |
| ADediting_781932 | chr19_53918953_+ | SINE | Alu | Name=AluSq2 |
| ADediting_781933 | chr19_53918975_+ | SINE | Alu | Name=AluSq2 |
| ADediting_781934 | chr19_53926663_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781935 | chr19_53926755_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781936 | chr19_53926757_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781937 | chr19_53926790_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781938 | chr19_53926792_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781939 | chr19_53926798_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781940 | chr19_53926802_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781941 | chr19_53926828_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781942 | chr19_53926857_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781943 | chr19_53926862_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781944 | chr19_53926895_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781945 | chr19_53926898_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781946 | chr19_53926901_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781947 | chr19_53927014_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781948 | chr19_53927049_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781949 | chr19_53927059_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781950 | chr19_53927061_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781951 | chr19_53927103_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781952 | chr19_53927129_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781953 | chr19_53927142_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781954 | chr19_53927154_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781955 | chr19_53927155_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781956 | chr19_53927180_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781957 | chr19_53927182_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781958 | chr19_53927194_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781959 | chr19_53927583_+ | SINE | Alu | Name=AluSq2 |
| ADediting_781960 | chr19_53927588_+ | SINE | Alu | Name=AluSq2 |
| ADediting_781961 | chr19_53927639_+ | SINE | Alu | Name=AluSq2 |
| ADediting_781962 | chr19_53927647_+ | SINE | Alu | Name=AluSq2 |
| ADediting_781963 | chr19_53928291_+ | SINE | Alu | Name=AluSz |
| ADediting_781964 | chr19_53928295_+ | SINE | Alu | Name=AluSz |
| ADediting_781965 | chr19_53928328_+ | SINE | Alu | Name=AluSz |
| ADediting_781966 | chr19_53928335_+ | SINE | Alu | Name=AluSz |
| ADediting_781967 | chr19_53928352_+ | SINE | Alu | Name=AluSz |
| ADediting_781968 | chr19_53928358_+ | SINE | Alu | Name=AluSz |
| ADediting_781969 | chr19_53928375_+ | SINE | Alu | Name=AluSz |
| ADediting_781970 | chr19_53928376_+ | SINE | Alu | Name=AluSz |
| ADediting_781971 | chr19_53928411_+ | SINE | Alu | Name=AluSz |
| ADediting_781972 | chr19_53928414_+ | SINE | Alu | Name=AluSz |
| ADediting_781973 | chr19_53928537_+ | SINE | Alu | Name=AluSz |
| ADediting_781974 | chr19_53928544_+ | SINE | Alu | Name=AluSz |
| ADediting_781975 | chr19_53928549_+ | SINE | Alu | Name=AluSz |
| ADediting_781976 | chr19_53928842_+ | SINE | Alu | Name=AluSg |
| ADediting_781977 | chr19_53928856_+ | SINE | Alu | Name=AluSg |
| ADediting_781978 | chr19_53928861_+ | SINE | Alu | Name=AluSg |
| ADediting_781979 | chr19_53929002_+ | SINE | Alu | Name=AluSg |
| ADediting_781980 | chr19_53929024_+ | SINE | Alu | Name=AluSg |
| ADediting_781981 | chr19_53929041_+ | SINE | Alu | Name=AluSg |
| ADediting_781982 | chr19_53929072_+ | SINE | Alu | Name=AluSg |
| ADediting_781983 | chr19_53929476_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781984 | chr19_53929478_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781985 | chr19_53929543_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781986 | chr19_53929550_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781987 | chr19_53929596_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781988 | chr19_53929637_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781989 | chr19_53929640_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781990 | chr19_53929654_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781991 | chr19_53929705_+ | SINE | Alu | Name=AluSx1 |
| ADediting_781992 | chr19_53930288_+ | SINE | Alu | Name=AluSx |
| ADediting_781993 | chr19_53930309_+ | SINE | Alu | Name=AluSx |
| ADediting_781994 | chr19_53930338_+ | SINE | Alu | Name=AluSx |
| ADediting_781995 | chr19_53930342_+ | SINE | Alu | Name=AluSx |
| ADediting_781996 | chr19_53930364_+ | SINE | Alu | Name=AluSx |
| ADediting_781997 | chr19_53930428_+ | SINE | Alu | Name=AluSc8 |
| ADediting_781998 | chr19_53930443_+ | SINE | Alu | Name=AluSc8 |
| ADediting_781999 | chr19_53930466_+ | SINE | Alu | Name=AluSc8 |
| ADediting_782000 | chr19_53930502_+ | SINE | Alu | Name=AluSc8 |
| ADediting_782001 | chr19_53930514_+ | SINE | Alu | Name=AluSc8 |
| ADediting_782002 | chr19_53930538_+ | SINE | Alu | Name=AluSc8 |
| ADediting_782003 | chr19_53930555_+ | SINE | Alu | Name=AluSc8 |
| ADediting_782004 | chr19_53930572_+ | SINE | Alu | Name=AluSc8 |
| ADediting_782005 | chr19_53930580_+ | SINE | Alu | Name=AluSc8 |
| ADediting_782006 | chr19_53930584_+ | SINE | Alu | Name=AluSc8 |
| ADediting_782007 | chr19_53930597_+ | SINE | Alu | Name=AluSc8 |
| ADediting_782008 | chr19_53930635_+ | SINE | Alu | Name=AluSc8 |
| ADediting_782009 | chr19_53930742_+ | SINE | Alu | Name=AluSx |
| ADediting_782010 | chr19_53930996_+ | SINE | Alu | Name=AluJb |
| ADediting_782011 | chr19_53930997_+ | SINE | Alu | Name=AluJb |
| ADediting_782012 | chr19_53931010_+ | SINE | Alu | Name=AluJb |
| ADediting_782013 | chr19_53931017_+ | SINE | Alu | Name=AluJb |
| ADediting_782014 | chr19_53931075_+ | SINE | Alu | Name=AluJb |
| ADediting_782015 | chr19_53931089_+ | SINE | Alu | Name=AluJb |
| ADediting_782016 | chr19_53931121_+ | SINE | Alu | Name=AluJb |
| ADediting_782017 | chr19_53931140_+ | SINE | Alu | Name=AluJb |
| ADediting_782018 | chr19_53931141_+ | SINE | Alu | Name=AluJb |
| ADediting_782019 | chr19_53931159_+ | SINE | Alu | Name=AluJb |
| ADediting_782020 | chr19_53931415_+ | SINE | Alu | Name=AluSz |
| ADediting_782021 | chr19_53931429_+ | SINE | Alu | Name=AluSz |
| ADediting_782022 | chr19_53931437_+ | SINE | Alu | Name=AluSz |
| ADediting_782023 | chr19_53931477_+ | SINE | Alu | Name=AluSz |
| ADediting_782024 | chr19_53931491_+ | SINE | Alu | Name=AluSz |
| ADediting_782025 | chr19_53931541_+ | SINE | Alu | Name=AluSz |
| ADediting_782026 | chr19_53931613_+ | SINE | Alu | Name=AluSz |
| ADediting_782027 | chr19_53931662_+ | SINE | Alu | Name=AluSz |
| ADediting_782028 | chr19_53931842_+ | SINE | Alu | Name=AluY |
| ADediting_782029 | chr19_53931891_+ | SINE | Alu | Name=AluY |
| ADediting_782030 | chr19_53931901_+ | SINE | Alu | Name=AluY |
| ADediting_782031 | chr19_53931903_+ | SINE | Alu | Name=AluY |
| ADediting_782032 | chr19_53931943_+ | SINE | Alu | Name=AluY |
| ADediting_782033 | chr19_53931968_+ | SINE | Alu | Name=AluY |
| ADediting_782034 | chr19_53932022_+ | SINE | Alu | Name=AluY |
| ADediting_782035 | chr19_53932111_+ | SINE | Alu | Name=AluJr |
| ADediting_782036 | chr19_53932132_+ | SINE | Alu | Name=AluJr |
| ADediting_782037 | chr19_53932162_+ | SINE | Alu | Name=AluJr |
| ADediting_782038 | chr19_53932165_+ | SINE | Alu | Name=AluJr |
| ADediting_782039 | chr19_53932175_+ | SINE | Alu | Name=AluJr |
| ADediting_782040 | chr19_53932179_+ | SINE | Alu | Name=AluJr |
| ADediting_782041 | chr19_53932211_+ | SINE | Alu | Name=AluJr |
| ADediting_782042 | chr19_53933171_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782043 | chr19_53933380_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782044 | chr19_53933429_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782045 | chr19_53933954_+ | SINE | Alu | Name=AluSx |
| ADediting_782046 | chr19_53933962_+ | SINE | Alu | Name=AluSx |
| ADediting_782047 | chr19_53933977_+ | SINE | Alu | Name=AluSx |
| ADediting_782048 | chr19_53933978_+ | SINE | Alu | Name=AluSx |
| ADediting_782049 | chr19_53933998_+ | SINE | Alu | Name=AluSx |
| ADediting_782050 | chr19_53933999_+ | SINE | Alu | Name=AluSx |
| ADediting_782051 | chr19_53934002_+ | SINE | Alu | Name=AluSx |
| ADediting_782052 | chr19_53934023_+ | SINE | Alu | Name=AluSx |
| ADediting_782053 | chr19_53934027_+ | SINE | Alu | Name=AluSx |
| ADediting_782054 | chr19_53934037_+ | SINE | Alu | Name=AluSx |
| ADediting_782055 | chr19_53934102_+ | SINE | Alu | Name=AluSx |
| ADediting_782056 | chr19_53934497_+ | SINE | Alu | Name=AluJo |
| ADediting_782057 | chr19_53934528_+ | SINE | Alu | Name=AluJo |
| ADediting_782058 | chr19_53934547_+ | SINE | Alu | Name=AluJo |
| ADediting_782059 | chr19_53934566_+ | SINE | Alu | Name=AluJo |
| ADediting_782060 | chr19_53934626_+ | SINE | Alu | Name=AluJo |
| ADediting_782061 | chr19_53934630_+ | SINE | Alu | Name=AluJo |
| ADediting_782062 | chr19_53934658_+ | SINE | Alu | Name=AluJo |
| ADediting_782063 | chr19_53934662_+ | SINE | Alu | Name=AluJo |
| ADediting_782064 | chr19_53934693_+ | SINE | Alu | Name=AluJo |
| ADediting_782065 | chr19_53934698_+ | SINE | Alu | Name=AluJo |
| ADediting_782066 | chr19_53934714_+ | SINE | Alu | Name=AluJo |
| ADediting_782067 | chr19_53934728_+ | SINE | Alu | Name=AluJo |
| ADediting_782068 | chr19_53934768_+ | SINE | Alu | Name=AluJo |
| ADediting_782069 | chr19_53935387_+ | SINE | Alu | Name=AluSz |
| ADediting_782070 | chr19_53935403_+ | SINE | Alu | Name=AluSz |
| ADediting_782071 | chr19_53935423_+ | SINE | Alu | Name=AluSz |
| ADediting_782072 | chr19_53935440_+ | SINE | Alu | Name=AluSz |
| ADediting_782073 | chr19_53935449_+ | SINE | Alu | Name=AluSz |
| ADediting_782074 | chr19_53935462_+ | SINE | Alu | Name=AluSz |
| ADediting_782075 | chr19_53935506_+ | SINE | Alu | Name=AluSz |
| ADediting_782076 | chr19_53935513_+ | SINE | Alu | Name=AluSz |
| ADediting_782077 | chr19_53935551_+ | SINE | Alu | Name=AluSz |
| ADediting_782078 | chr19_53935575_+ | SINE | Alu | Name=AluSz |
| ADediting_782079 | chr19_53936628_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782080 | chr19_53936640_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782081 | chr19_53936683_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782082 | chr19_53936689_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782083 | chr19_53936709_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782084 | chr19_53936712_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782085 | chr19_53936713_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782086 | chr19_53936734_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782087 | chr19_53936829_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782088 | chr19_53936843_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782089 | chr19_53936844_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782090 | chr19_53936883_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782091 | chr19_53936889_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782092 | chr19_53936977_+ | SINE | Alu | Name=AluJr |
| ADediting_782093 | chr19_53937001_+ | SINE | Alu | Name=AluJr |
| ADediting_782094 | chr19_53937033_+ | SINE | Alu | Name=AluJr |
| ADediting_782095 | chr19_53937087_+ | SINE | Alu | Name=AluJr |
| ADediting_782096 | chr19_53937125_+ | SINE | Alu | Name=AluJr |
| ADediting_782097 | chr19_53937671_+ | SINE | Alu | Name=AluSq |
| ADediting_782098 | chr19_53937691_+ | SINE | Alu | Name=AluSq |
| ADediting_782099 | chr19_53937720_+ | SINE | Alu | Name=AluSq |
| ADediting_782100 | chr19_53937730_+ | SINE | Alu | Name=AluSq |
| ADediting_782101 | chr19_53937752_+ | SINE | Alu | Name=AluSq |
| ADediting_782102 | chr19_53937774_+ | SINE | Alu | Name=AluSq |
| ADediting_782103 | chr19_53937800_+ | SINE | Alu | Name=AluSq |
| ADediting_782104 | chr19_53937811_+ | SINE | Alu | Name=AluSq |
| ADediting_782105 | chr19_53937865_+ | SINE | Alu | Name=AluSq |
| ADediting_782106 | chr19_53937873_+ | SINE | Alu | Name=AluSq |
| ADediting_782107 | chr19_53938091_+ | SINE | Alu | Name=AluJo |
| ADediting_782108 | chr19_53938092_+ | SINE | Alu | Name=AluJo |
| ADediting_782109 | chr19_53938114_+ | SINE | Alu | Name=AluJo |
| ADediting_782110 | chr19_53938137_+ | SINE | Alu | Name=AluJo |
| ADediting_782111 | chr19_53938140_+ | SINE | Alu | Name=AluJo |
| ADediting_782112 | chr19_53938146_+ | SINE | Alu | Name=AluJo |
| ADediting_782113 | chr19_53938151_+ | SINE | Alu | Name=AluJo |
| ADediting_782114 | chr19_53938161_+ | SINE | Alu | Name=AluJo |
| ADediting_782115 | chr19_53938163_+ | SINE | Alu | Name=AluJo |
| ADediting_782116 | chr19_53938182_+ | SINE | Alu | Name=AluJo |
| ADediting_782117 | chr19_53938196_+ | SINE | Alu | Name=AluJo |
| ADediting_782118 | chr19_53938197_+ | SINE | Alu | Name=AluJo |
| ADediting_782119 | chr19_53938201_+ | SINE | Alu | Name=AluJo |
| ADediting_782120 | chr19_53938209_+ | SINE | Alu | Name=AluJo |
| ADediting_782121 | chr19_53938257_+ | SINE | Alu | Name=AluJo |
| ADediting_782122 | chr19_53938268_+ | SINE | Alu | Name=AluJo |
| ADediting_782123 | chr19_53938309_+ | SINE | Alu | Name=AluJo |
| ADediting_782124 | chr19_53938674_+ | SINE | Alu | Name=AluJb |
| ADediting_782125 | chr19_53938676_+ | SINE | Alu | Name=AluJb |
| ADediting_782126 | chr19_53938801_+ | SINE | Alu | Name=AluJb |
| ADediting_782127 | chr19_53938840_+ | SINE | Alu | Name=AluJb |
| ADediting_782128 | chr19_53938863_+ | SINE | Alu | Name=AluJb |
| ADediting_782129 | chr19_53938868_+ | SINE | Alu | Name=AluJb |
| ADediting_782130 | chr19_53938877_+ | SINE | Alu | Name=AluJb |
| ADediting_782131 | chr19_53939002_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782132 | chr19_53939041_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782133 | chr19_53939080_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782134 | chr19_53939092_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782135 | chr19_53939095_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782136 | chr19_53939104_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782137 | chr19_53939110_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782138 | chr19_53939114_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782139 | chr19_53939138_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782140 | chr19_53939143_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782141 | chr19_53939151_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782142 | chr19_53939221_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782143 | chr19_53939233_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782144 | chr19_53940914_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782145 | chr19_53940940_+ | SINE | Alu | Name=AluSx1 |
| ADediting_782146 | chr19_53940982_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1559007 | chr19_53926893_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1559008 | chr19_53933984_+ | SINE | Alu | Name=AluSx |
| ADediting_1559009 | chr19_53934039_+ | SINE | Alu | Name=AluSx |
| ADediting_1559010 | chr19_53934171_+ | SINE | Alu | Name=AluSx |
| ADediting_1559011 | chr19_53935378_+ | SINE | Alu | Name=AluSz |
| ADediting_1559012 | chr19_53935452_+ | SINE | Alu | Name=AluSz |
| ADediting_1559013 | chr19_53935512_+ | SINE | Alu | Name=AluSz |
| ADediting_1559014 | chr19_53936878_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1559015 | chr19_53936929_+ | SINE | Alu | Name=AluJr |
| ADediting_1559016 | chr19_53938169_+ | SINE | Alu | Name=AluJo |
| ADediting_1559017 | chr19_53938190_+ | SINE | Alu | Name=AluJo |
| ADediting_1559018 | chr19_53938219_+ | SINE | Alu | Name=AluJo |
| ADediting_1559019 | chr19_53938727_+ | SINE | Alu | Name=AluJb |
| ADediting_1559020 | chr19_53938897_+ | SINE | Alu | Name=AluJb |
| ADediting_1559021 | chr19_53940996_+ | SINE | Alu | Name=AluSx1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for CACNG7 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for CACNG7 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for CACNG7 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for CACNG7 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000105605.7 | ENST00000391767.5 | CACNG7-203 | hsa-miR-589-3p | chr19 | 53942607 | 53942614 | 8mer-1a | 53942591 | 53942614 | 144 | -15.63 |
| ADediting_496066 | chr15_66496985_- | ENSG00000105605.7 | ENST00000391767.5 | CACNG7-203 | hsa-miR-4512 | chr19 | 53942420 | 53942426 | 7mer-m8 | 53942406 | 53942427 | 147 | -25.45 |
| ADediting_496066 | chr15_66496985_- | ENSG00000105605.7 | ENST00000391767.5 | CACNG7-203 | hsa-miR-4512 | chr19 | 53943217 | 53943223 | 7mer-m8 | 53943203 | 53943224 | 145 | -22.21 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_843620 | chr2_207754818_+ | ENSG00000105605.7 | ENST00000391767.5 | CACNG7-203 | hsa-miR-4775 | chr19 | 53942579 | 53942585 | 7mer-m8 | 53942565 | 53942586 | 146 | -7.77 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for CACNG7 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for CACNG7 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1559015 | chr19_53936929_+ | 0.0204676977942387 | 0.189107480652968 | 6.35958779766122e-06 | 0.35920009112574 | 0.00144070358309805 | 0.257907653283561 |
| DLPFC | ADediting_781933 | chr19_53918975_+ | 0.357651830818338 | 0.0524197307949428 | 0.898911458447411 | 0.00724436284861282 | 3.74973929124842e-10 | 0.346118851200778 |
| CER | ADediting_781944 | chr19_53926895_+ | 0.088287394206981 | 0.139657391178636 | 8.70906215746135e-05 | 0.314840192801756 | 0.0386125331811536 | 0.169071995775872 |
| CER | ADediting_781946 | chr19_53926901_+ | 0.0293489106557802 | 0.177961852476687 | 7.99437018719699e-05 | 0.31640516320326 | 0.0123489019280404 | 0.203844158764987 |
| CER | ADediting_781947 | chr19_53927014_+ | 0.0048978286084053 | 0.228598050352042 | 1.19480405362839e-05 | 0.349112066498899 | 0.0203073076044694 | 0.189344537596819 |
| CER | ADediting_781978 | chr19_53928861_+ | 0.010719959707163 | 0.207804093416265 | 2.22691848630223e-05 | 0.338799743338879 | 0.00112322601951053 | 0.263477449038003 |
| CER | ADediting_782005 | chr19_53930580_+ | 0.0315202869437923 | 0.175684507245473 | 0.000110159143366576 | 0.310500469359274 | 0.0231278993430127 | 0.185392319485725 |
| CER | ADediting_782010 | chr19_53930996_+ | 0.0150260548268032 | 0.198235345960275 | 1.98703326104653e-07 | 0.409296084486166 | 0.00308175654842023 | 0.240102708794598 |
| CER | ADediting_782013 | chr19_53931017_+ | 0.0470092163754829 | 0.16245400201843 | 1.33930366302188e-06 | 0.382747934659282 | 0.0225780991154814 | 0.18612882272004 |
| CER | ADediting_782015 | chr19_53931089_+ | 0.0370891639582667 | 0.170400174336533 | 1.0076959819999e-05 | 0.351870840391791 | 0.0582439499093323 | 0.154993595580325 |
| CER | ADediting_782018 | chr19_53931141_+ | 0.0231845484970799 | 0.185317291217666 | 0.000188052688153664 | 0.300365484585312 | 0.167951326184899 | 0.113164586517992 |
| DLPFC | ADediting_782032 | chr19_53931943_+ | 0.682089446795719 | 0.023355664343613 | 0.233281776467074 | -0.0678942112966821 | 7.34789533841928e-13 | 0.392508200434624 |
| DLPFC | ADediting_782055 | chr19_53934102_+ | 0.693812546245089 | -0.0224477534589127 | 0.0535383974291319 | -0.109759930044166 | 4.30120061448419e-11 | 0.363085184941562 |
| CER | ADediting_782057 | chr19_53934528_+ | 0.0202343184202742 | 0.189452951370243 | 1.02498609892509e-06 | 0.386611920653373 | 0.00908729116205792 | 0.212345284414614 |
| DLPFC | ADediting_782058 | chr19_53934547_+ | 0.580598883558921 | 0.0314999313020252 | 0.560814370908274 | -0.0331593655542136 | 1.29121937156192e-10 | 0.354597987104994 |
| CER | ADediting_782058 | chr19_53934547_+ | 0.00707569735531209 | 0.219058800467172 | 3.67346880876181e-08 | 0.431007922417066 | 0.0960917836615737 | 0.136378739837682 |
| DLPFC | ADediting_782059 | chr19_53934566_+ | 0.476421681596323 | 0.0405901392765769 | 0.64788106190589 | -0.0260400580302682 | 1.92867510795727e-09 | 0.332575812127407 |
| CER | ADediting_782069 | chr19_53935387_+ | 0.0328147629981486 | 0.174389531117241 | 2.73426064108864e-05 | 0.335318908379095 | 0.0871946614283837 | 0.140134693445081 |
| CER | ADediting_782070 | chr19_53935403_+ | 0.0269260823505591 | 0.180678989359174 | 1.84532925652967e-05 | 0.34195134866691 | 0.0214756814861326 | 0.187653338317958 |
| DLPFC | ADediting_782078 | chr19_53935575_+ | 0.211415852717624 | 0.071174631347677 | 0.870378059525546 | -0.0093052945582448 | 6.19817362451859e-10 | 0.342031965800488 |
| DLPFC | ADediting_782080 | chr19_53936640_+ | 0.0944113153177492 | 0.0951645187264707 | 0.318517441776004 | 0.0568385128873522 | 3.21717531132092e-08 | 0.307631382949107 |
| DLPFC | ADediting_782083 | chr19_53936709_+ | 0.0630043795895886 | 0.10572420846636 | 0.402919874122087 | 0.0476709063771842 | 1.19491588258114e-09 | 0.336603030065468 |
| DLPFC | ADediting_782084 | chr19_53936712_+ | 0.300755021659628 | 0.0589606200804431 | 0.97874121678037 | -0.00151959073830853 | 1.18194918007928e-09 | 0.336694135952366 |
| DLPFC | ADediting_782092 | chr19_53936977_+ | 0.881061596799246 | 0.00853236277838999 | 0.253634834441888 | -0.0650305979836826 | 2.2170800999639e-08 | 0.311065860589421 |
| CER | ADediting_782092 | chr19_53936977_+ | 0.0786023448318871 | 0.144064856740067 | 3.05116595466006e-06 | 0.370532699780334 | 0.129175248990754 | 0.12445103473619 |
| CER | ADediting_782093 | chr19_53937001_+ | 0.0196436625670426 | 0.190342926488168 | 3.10314626441497e-06 | 0.370276814334778 | 0.256799971653662 | 0.0931675006161382 |
| CER | ADediting_782103 | chr19_53937800_+ | 0.0521056153223559 | 0.158905053915321 | 5.64030124461499e-05 | 0.322692352289293 | 0.139676800051976 | 0.121165018396295 |
| CER | ADediting_782104 | chr19_53937811_+ | 0.0436739421426939 | 0.164954109044339 | 3.78330832712754e-07 | 0.400592209583839 | 0.0469964119962467 | 0.162463313225739 |
| CER | ADediting_782105 | chr19_53937865_+ | 0.0710995595070758 | 0.147790664930378 | 6.12748190216317e-06 | 0.359784267205312 | 0.039932683296304 | 0.167956188286124 |
| CER | ADediting_782106 | chr19_53937873_+ | 0.117994944072206 | 0.128183611467801 | 7.89025438297491e-05 | 0.31664399387281 | 0.0921867835092701 | 0.137991649517023 |
| CER | ADediting_782107 | chr19_53938091_+ | 0.0853548901775817 | 0.140949208215289 | 0.000136960635052407 | 0.306417845861717 | 0.000387776546734279 | 0.286030477066893 |
| CER | ADediting_782109 | chr19_53938114_+ | 0.0836801169807478 | 0.141702981686231 | 1.72557802623629e-05 | 0.343068163637288 | 0.0263457956129 | 0.181360650019529 |
| CER | ADediting_782110 | chr19_53938137_+ | 0.0393102557280295 | 0.168478346427403 | 0.000264499356458137 | 0.293702030789963 | 9.41623482294642e-05 | 0.313405716415127 |
| CER | ADediting_782114 | chr19_53938161_+ | 0.0227411099536805 | 0.185908862091483 | 0.000135160302440791 | 0.306667621671915 | 0.0187459070332164 | 0.191740979412845 |
| CER | ADediting_782118 | chr19_53938197_+ | 0.0605040860068121 | 0.153638749472027 | 1.16247538674809e-05 | 0.349558137248486 | 0.349813513833446 | 0.0768684534544216 |
| CER | ADediting_782122 | chr19_53938268_+ | 0.0938135608693766 | 0.137313263308603 | 7.8236405693935e-05 | 0.316798350682023 | 0.394446797787101 | 0.0700317081639015 |
| CER | ADediting_782124 | chr19_53938674_+ | 0.0496471148331057 | 0.160579258489879 | 3.11757094357389e-06 | 0.370206526711354 | 0.0477534496355729 | 0.161916396665329 |
| CER | ADediting_782125 | chr19_53938676_+ | 0.0759639022407052 | 0.145340963945575 | 1.14996043950096e-05 | 0.34973397175691 | 0.0752655398107174 | 0.145684712722259 |
| DLPFC | ADediting_782126 | chr19_53938801_+ | 0.333752130595923 | 0.0550790933831539 | 0.597848282400005 | -0.0300745500043184 | 2.30739143354718e-13 | 0.400371586332432 |
| DLPFC | ADediting_782127 | chr19_53938840_+ | 0.202017709527706 | 0.0726596538146828 | 0.967702097268487 | 0.00230902955130562 | 7.78113091193054e-10 | 0.340162693108194 |
| DLPFC | ADediting_782128 | chr19_53938863_+ | 0.0734867998450233 | 0.101800561099005 | 0.329436479203895 | 0.0555721364079448 | 2.55267534021039e-09 | 0.330190553649459 |
| CER | ADediting_782128 | chr19_53938863_+ | 0.0825083817952324 | 0.142237570585732 | 0.00013203023064735 | 0.30710936406323 | 0.155765987142806 | 0.116477638377723 |
| DLPFC | ADediting_782134 | chr19_53939092_+ | 0.356277461472527 | 0.0525695614487825 | 0.787113129992904 | -0.0153997501323128 | 1.59003630955672e-09 | 0.334206945474899 |
| DLPFC | ADediting_782143 | chr19_53939233_+ | 0.668005754133803 | -0.0244542679140386 | 0.201430361413006 | -0.0727541083455202 | 5.32858895258166e-08 | 0.302905219030661 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 4.32728116702155e-48 | 0.706111957716869 | 1.09549692316447e-79 | 0.828889624391855 | 2.96220259772857e-06 | 0.261844965172514 |
| AC | 6.50304562881225e-68 | 0.840371319115934 | 3.4120618733152e-50 | 0.769443689277335 | 5.12540560622585e-21 | 0.548241589684431 |
| PCC | 4.19030246393448e-55 | 0.852357057129047 | 7.14873712416245e-66 | 0.888558150642561 | 0.000772458349536468 | 0.241279668275191 |
| CER | 2.33718035818638e-07 | 0.407125556879693 | 1.04012791860399e-10 | 0.496459796319186 | 0.0436362453048088 | 0.164983264886963 |
| TCX | 2.0363055014823e-14 | 0.57215162882579 | 1.26839270381229e-22 | 0.691114266288053 | 0.634837028468979 | -0.0390900329231196 |
| FP | 2.76550584430922e-05 | 0.30866868069049 | 0.679992987726823 | 0.0311279464988122 | 2.22125822580656e-07 | 0.376512117829318 |
| IFG | 1.81582323733525e-05 | 0.746616588242241 | 2.75391356407069e-06 | 0.789168100374704 | 0.0916179475477156 | 0.344603098958334 |
| STG | 1.43526806097424e-07 | 0.536539804383454 | 0.00807248557588309 | 0.287218561688077 | 0.00140570682074724 | 0.342944346525778 |
Top |
Relation with AD stages for CACNG7 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_782057 | chr19_53934528_+ | 0.00100441693403844 | 0.312194574965482 |
| CER | ADediting_782058 | chr19_53934547_+ | 0.00135924797882169 | 0.304417456050738 |
| CER | ADediting_782104 | chr19_53937811_+ | 0.00125969376029019 | 0.306392673835747 |
| CER | ADediting_782105 | chr19_53937865_+ | 0.000368095126450156 | 0.336608101956671 |
| CER | ADediting_782106 | chr19_53937873_+ | 6.19077642001733e-05 | 0.375582852748523 |
| CER | ADediting_782109 | chr19_53938114_+ | 0.000127652173697315 | 0.360360865760906 |
| CER | ADediting_782113 | chr19_53938151_+ | 0.000410438773394677 | 0.334055617861069 |
| CER | ADediting_782118 | chr19_53938197_+ | 0.000842639493317703 | 0.316615334815435 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
Top |
RelatedDrugs for CACNG7 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for CACNG7 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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