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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for RRAGD |
 Gene summary |
| Gene information | Gene symbol | RRAGD | Gene ID | 58528 |
| Gene name | Ras related GTP binding D | |
| Synonyms | RAGD|bA11D8.2.1 | |
| Cytomap | 6q15 | |
| Type of gene | protein-coding | |
| Description | ras-related GTP-binding protein DRag D protein | |
| Modification date | 20200313 | |
| UniProtAcc | Q9NQL2, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for RRAGD |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_1281384(89366271, -), ADediting_1281385(89366282, -), ADediting_1281386(89366283, -), ADediting_1281387(89366325, -), ADediting_1281388(89366335, -), ADediting_1281389(89366336, -), ADediting_1281390(89366356, -), ADediting_1281391(89366408, -), ADediting_1281392(89366410, -), ADediting_1281393(89366416, -), ADediting_1281394(89366420, -), ADediting_1281395(89366423, -), ADediting_1281396(89366432, -), ADediting_1281397(89366437, -), ADediting_1281398(89366449, -), ADediting_1281399(89366474, -), ADediting_1281400(89366479, -), ADediting_1281401(89366482, -), ADediting_1281402(89366490, -), ADediting_1281403(89366492, -), ADediting_1281404(89366523, -), ADediting_1281405(89380718, -), ADediting_1281406(89384020, -), ADediting_1281407(89384046, -), ADediting_1281408(89384088, -), ADediting_1281409(89384412, -), ADediting_1281410(89384416, -), ADediting_1281411(89384417, -), ADediting_1281412(89384558, -), ADediting_1281413(89384572, -), ADediting_1281414(89384994, -), ADediting_1281415(89395014, -), ADediting_1281416(89395022, -), ADediting_1281417(89395197, -), ADediting_1281418(89395213, -), ADediting_1281419(89395215, -), ADediting_1281420(89395221, -), ADediting_1281421(89396537, -), ADediting_1281422(89396692, -), ADediting_1281423(89396853, -), ADediting_1281424(89396866, -), ADediting_1281425(89396880, -), ADediting_1281426(89401386, -), ADediting_1281427(89401406, -), ADediting_1281428(89401422, -), ADediting_1281429(89401449, -), ADediting_1281430(89401474, -), ADediting_1281431(89402102, -), ADediting_1281432(89402185, -), ADediting_1281433(89402186, -), ADediting_1281434(89402218, -), ADediting_1281435(89403197, -), ADediting_1281436(89403198, -), ADediting_1281437(89403207, -), ADediting_1281438(89403256, -), ADediting_1281439(89403323, -), ADediting_1281440(89403333, -), ADediting_1281441(89403358, -), ADediting_1281442(89403382, -), ADediting_1281443(89403743, -), ADediting_1281444(89403773, -), ADediting_1281445(89403801, -), ADediting_1281446(89403877, -), ADediting_1281447(89403909, -), ADediting_1584732(89366397, -), ADediting_1584733(89366512, -), ADediting_1584734(89369501, -), ADediting_1584735(89369529, -), ADediting_1584736(89369546, -), ADediting_1584737(89369604, -), ADediting_1584738(89369623, -), ADediting_1584739(89369624, -), ADediting_1584740(89369654, -), ADediting_1584741(89369656, -), ADediting_1584742(89369672, -), ADediting_1584743(89369680, -), ADediting_1584744(89371286, -), ADediting_1584745(89371373, -), ADediting_1584746(89380651, -), ADediting_1584747(89380850, -), ADediting_1584748(89382523, -), ADediting_1584749(89384021, -), ADediting_1584750(89384390, -), ADediting_1584751(89384396, -), ADediting_1584752(89384436, -), ADediting_1584753(89384442, -), ADediting_1584754(89384481, -), ADediting_1584755(89384482, -), ADediting_1584756(89384484, -), ADediting_1584757(89384787, -), ADediting_1584758(89384992, -), ADediting_1662966(89366480, -), ADediting_1662967(89366525, -), |
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RNA editing positional annotations for RRAGD using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1281384 | chr6_89366271_- | UTR3 |
| ADediting_1281385 | chr6_89366282_- | UTR3 |
| ADediting_1281386 | chr6_89366283_- | UTR3 |
| ADediting_1281387 | chr6_89366325_- | UTR3 |
| ADediting_1281388 | chr6_89366335_- | UTR3 |
| ADediting_1281389 | chr6_89366336_- | UTR3 |
| ADediting_1281390 | chr6_89366356_- | UTR3 |
| ADediting_1281391 | chr6_89366408_- | UTR3 |
| ADediting_1281392 | chr6_89366410_- | UTR3 |
| ADediting_1281393 | chr6_89366416_- | UTR3 |
| ADediting_1281394 | chr6_89366420_- | UTR3 |
| ADediting_1281395 | chr6_89366423_- | UTR3 |
| ADediting_1281396 | chr6_89366432_- | UTR3 |
| ADediting_1281397 | chr6_89366437_- | UTR3 |
| ADediting_1281398 | chr6_89366449_- | UTR3 |
| ADediting_1281399 | chr6_89366474_- | UTR3 |
| ADediting_1281400 | chr6_89366479_- | UTR3 |
| ADediting_1281401 | chr6_89366482_- | UTR3 |
| ADediting_1281402 | chr6_89366490_- | UTR3 |
| ADediting_1281403 | chr6_89366492_- | UTR3 |
| ADediting_1281404 | chr6_89366523_- | UTR3 |
| ADediting_1281405 | chr6_89380718_- | intronic |
| ADediting_1281406 | chr6_89384020_- | intronic |
| ADediting_1281407 | chr6_89384046_- | intronic |
| ADediting_1281408 | chr6_89384088_- | intronic |
| ADediting_1281409 | chr6_89384412_- | intronic |
| ADediting_1281410 | chr6_89384416_- | intronic |
| ADediting_1281411 | chr6_89384417_- | intronic |
| ADediting_1281412 | chr6_89384558_- | intronic |
| ADediting_1281413 | chr6_89384572_- | intronic |
| ADediting_1281414 | chr6_89384994_- | intronic |
| ADediting_1281415 | chr6_89395014_- | intronic |
| ADediting_1281416 | chr6_89395022_- | intronic |
| ADediting_1281417 | chr6_89395197_- | intronic |
| ADediting_1281418 | chr6_89395213_- | intronic |
| ADediting_1281419 | chr6_89395215_- | intronic |
| ADediting_1281420 | chr6_89395221_- | intronic |
| ADediting_1281421 | chr6_89396537_- | intronic |
| ADediting_1281422 | chr6_89396692_- | intronic |
| ADediting_1281423 | chr6_89396853_- | intronic |
| ADediting_1281424 | chr6_89396866_- | intronic |
| ADediting_1281425 | chr6_89396880_- | intronic |
| ADediting_1281426 | chr6_89401386_- | intronic |
| ADediting_1281427 | chr6_89401406_- | intronic |
| ADediting_1281428 | chr6_89401422_- | intronic |
| ADediting_1281429 | chr6_89401449_- | intronic |
| ADediting_1281430 | chr6_89401474_- | intronic |
| ADediting_1281431 | chr6_89402102_- | intronic |
| ADediting_1281432 | chr6_89402185_- | intronic |
| ADediting_1281433 | chr6_89402186_- | intronic |
| ADediting_1281434 | chr6_89402218_- | intronic |
| ADediting_1281435 | chr6_89403197_- | intronic |
| ADediting_1281436 | chr6_89403198_- | intronic |
| ADediting_1281437 | chr6_89403207_- | intronic |
| ADediting_1281438 | chr6_89403256_- | intronic |
| ADediting_1281439 | chr6_89403323_- | intronic |
| ADediting_1281440 | chr6_89403333_- | intronic |
| ADediting_1281441 | chr6_89403358_- | intronic |
| ADediting_1281442 | chr6_89403382_- | intronic |
| ADediting_1281443 | chr6_89403743_- | intronic |
| ADediting_1281444 | chr6_89403773_- | intronic |
| ADediting_1281445 | chr6_89403801_- | intronic |
| ADediting_1281446 | chr6_89403877_- | intronic |
| ADediting_1281447 | chr6_89403909_- | intronic |
| ADediting_1584732 | chr6_89366397_- | UTR3 |
| ADediting_1584733 | chr6_89366512_- | UTR3 |
| ADediting_1584734 | chr6_89369501_- | intronic |
| ADediting_1584735 | chr6_89369529_- | intronic |
| ADediting_1584736 | chr6_89369546_- | intronic |
| ADediting_1584737 | chr6_89369604_- | intronic |
| ADediting_1584738 | chr6_89369623_- | intronic |
| ADediting_1584739 | chr6_89369624_- | intronic |
| ADediting_1584740 | chr6_89369654_- | intronic |
| ADediting_1584741 | chr6_89369656_- | intronic |
| ADediting_1584742 | chr6_89369672_- | intronic |
| ADediting_1584743 | chr6_89369680_- | intronic |
| ADediting_1584744 | chr6_89371286_- | intronic |
| ADediting_1584745 | chr6_89371373_- | intronic |
| ADediting_1584746 | chr6_89380651_- | intronic |
| ADediting_1584747 | chr6_89380850_- | intronic |
| ADediting_1584748 | chr6_89382523_- | intronic |
| ADediting_1584749 | chr6_89384021_- | intronic |
| ADediting_1584750 | chr6_89384390_- | intronic |
| ADediting_1584751 | chr6_89384396_- | intronic |
| ADediting_1584752 | chr6_89384436_- | intronic |
| ADediting_1584753 | chr6_89384442_- | intronic |
| ADediting_1584754 | chr6_89384481_- | intronic |
| ADediting_1584755 | chr6_89384482_- | intronic |
| ADediting_1584756 | chr6_89384484_- | intronic |
| ADediting_1584757 | chr6_89384787_- | intronic |
| ADediting_1584758 | chr6_89384992_- | intronic |
| ADediting_1662966 | chr6_89366480_- | UTR3 |
| ADediting_1662967 | chr6_89366525_- | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1281384 | chr6_89366271_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281385 | chr6_89366282_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281386 | chr6_89366283_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281387 | chr6_89366325_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281388 | chr6_89366335_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281389 | chr6_89366336_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281390 | chr6_89366356_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281391 | chr6_89366408_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281392 | chr6_89366410_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281393 | chr6_89366416_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281394 | chr6_89366420_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281395 | chr6_89366423_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281396 | chr6_89366432_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281397 | chr6_89366437_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281398 | chr6_89366449_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281399 | chr6_89366474_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281400 | chr6_89366479_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281401 | chr6_89366482_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281402 | chr6_89366490_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281403 | chr6_89366492_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281404 | chr6_89366523_- | SINE | Alu | Name=AluJr4 |
| ADediting_1281405 | chr6_89380718_- | SINE | Alu | Name=AluSc8 |
| ADediting_1281406 | chr6_89384020_- | SINE | Alu | Name=AluSc |
| ADediting_1281407 | chr6_89384046_- | SINE | Alu | Name=AluSc |
| ADediting_1281408 | chr6_89384088_- | SINE | Alu | Name=AluSc |
| ADediting_1281409 | chr6_89384412_- | SINE | Alu | Name=FRAM |
| ADediting_1281410 | chr6_89384416_- | SINE | Alu | Name=FRAM |
| ADediting_1281411 | chr6_89384417_- | SINE | Alu | Name=FRAM |
| ADediting_1281412 | chr6_89384558_- | SINE | Alu | Name=AluY |
| ADediting_1281413 | chr6_89384572_- | SINE | Alu | Name=AluY |
| ADediting_1281414 | chr6_89384994_- | SINE | Alu | Name=AluJo |
| ADediting_1281415 | chr6_89395014_- | SINE | Alu | Name=AluJr |
| ADediting_1281416 | chr6_89395022_- | SINE | Alu | Name=AluJr |
| ADediting_1281417 | chr6_89395197_- | SINE | Alu | Name=AluJr |
| ADediting_1281418 | chr6_89395213_- | SINE | Alu | Name=AluJr |
| ADediting_1281419 | chr6_89395215_- | SINE | Alu | Name=AluJr |
| ADediting_1281420 | chr6_89395221_- | SINE | Alu | Name=AluJr |
| ADediting_1281421 | chr6_89396537_- | SINE | Alu | Name=AluJb |
| ADediting_1281422 | chr6_89396692_- | SINE | Alu | Name=AluJb |
| ADediting_1281423 | chr6_89396853_- | SINE | Alu | Name=AluSz |
| ADediting_1281424 | chr6_89396866_- | SINE | Alu | Name=AluSz |
| ADediting_1281425 | chr6_89396880_- | SINE | Alu | Name=AluSz |
| ADediting_1281426 | chr6_89401386_- | SINE | Alu | Name=AluSx1 |
| ADediting_1281427 | chr6_89401406_- | SINE | Alu | Name=AluSx1 |
| ADediting_1281428 | chr6_89401422_- | SINE | Alu | Name=AluSx1 |
| ADediting_1281429 | chr6_89401449_- | SINE | Alu | Name=AluSx1 |
| ADediting_1281430 | chr6_89401474_- | SINE | Alu | Name=AluSx1 |
| ADediting_1281431 | chr6_89402102_- | SINE | Alu | Name=AluSg |
| ADediting_1281432 | chr6_89402185_- | SINE | Alu | Name=AluSg |
| ADediting_1281433 | chr6_89402186_- | SINE | Alu | Name=AluSg |
| ADediting_1281434 | chr6_89402218_- | SINE | Alu | Name=AluSg |
| ADediting_1281435 | chr6_89403197_- | SINE | Alu | Name=AluY |
| ADediting_1281436 | chr6_89403198_- | SINE | Alu | Name=AluY |
| ADediting_1281437 | chr6_89403207_- | SINE | Alu | Name=AluY |
| ADediting_1281438 | chr6_89403256_- | SINE | Alu | Name=AluY |
| ADediting_1281439 | chr6_89403323_- | SINE | Alu | Name=AluY |
| ADediting_1281440 | chr6_89403333_- | SINE | Alu | Name=AluY |
| ADediting_1281441 | chr6_89403358_- | SINE | Alu | Name=AluY |
| ADediting_1281442 | chr6_89403382_- | SINE | Alu | Name=AluY |
| ADediting_1281443 | chr6_89403743_- | SINE | Alu | Name=AluJo |
| ADediting_1281444 | chr6_89403773_- | SINE | Alu | Name=AluJo |
| ADediting_1281445 | chr6_89403801_- | SINE | Alu | Name=AluJo |
| ADediting_1281446 | chr6_89403877_- | SINE | Alu | Name=AluJo |
| ADediting_1281447 | chr6_89403909_- | SINE | Alu | Name=AluJo |
| ADediting_1584732 | chr6_89366397_- | SINE | Alu | Name=AluJr4 |
| ADediting_1584733 | chr6_89366512_- | SINE | Alu | Name=AluJr4 |
| ADediting_1584734 | chr6_89369501_- | SINE | Alu | Name=AluJo |
| ADediting_1584735 | chr6_89369529_- | SINE | Alu | Name=AluJo |
| ADediting_1584736 | chr6_89369546_- | SINE | Alu | Name=AluJo |
| ADediting_1584737 | chr6_89369604_- | SINE | Alu | Name=AluJo |
| ADediting_1584738 | chr6_89369623_- | SINE | Alu | Name=AluJo |
| ADediting_1584739 | chr6_89369624_- | SINE | Alu | Name=AluJo |
| ADediting_1584740 | chr6_89369654_- | SINE | Alu | Name=AluJo |
| ADediting_1584741 | chr6_89369656_- | SINE | Alu | Name=AluJo |
| ADediting_1584742 | chr6_89369672_- | SINE | Alu | Name=AluJo |
| ADediting_1584743 | chr6_89369680_- | SINE | Alu | Name=AluJo |
| ADediting_1584744 | chr6_89371286_- | SINE | Alu | Name=AluJb |
| ADediting_1584745 | chr6_89371373_- | SINE | Alu | Name=AluJb |
| ADediting_1584746 | chr6_89380651_- | SINE | Alu | Name=AluSc8 |
| ADediting_1584747 | chr6_89380850_- | SINE | Alu | Name=AluSc8 |
| ADediting_1584748 | chr6_89382523_- | SINE | Alu | Name=AluJr4 |
| ADediting_1584749 | chr6_89384021_- | SINE | Alu | Name=AluSc |
| ADediting_1584750 | chr6_89384390_- | SINE | Alu | Name=FRAM |
| ADediting_1584751 | chr6_89384396_- | SINE | Alu | Name=FRAM |
| ADediting_1584752 | chr6_89384436_- | SINE | Alu | Name=FRAM |
| ADediting_1584753 | chr6_89384442_- | SINE | Alu | Name=FRAM |
| ADediting_1584754 | chr6_89384481_- | SINE | Alu | Name=FRAM |
| ADediting_1584755 | chr6_89384482_- | SINE | Alu | Name=FRAM |
| ADediting_1584756 | chr6_89384484_- | SINE | Alu | Name=FRAM |
| ADediting_1584757 | chr6_89384787_- | SINE | Alu | Name=AluY |
| ADediting_1584758 | chr6_89384992_- | SINE | Alu | Name=AluJo |
| ADediting_1662966 | chr6_89366480_- | SINE | Alu | Name=AluJr4 |
| ADediting_1662967 | chr6_89366525_- | SINE | Alu | Name=AluJr4 |
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RNA A-to-I editing events in the alternative splicing sites for RRAGD |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RRAGD |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for RRAGD |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for RRAGD |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1281385 | chr6_89366282_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-383-3p | chr6 | 89366276 | 89366283 | 8mer-1a | 89366276 | 89366294 | 140 | -17.87 |
| ADediting_1281385 | chr6_89366282_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-383-3p | chr6 | 89366276 | 89366283 | 8mer-1a | 89366276 | 89366294 | 140 | -17.87 |
| ADediting_1281386 | chr6_89366283_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-12119 | chr6 | 89366282 | 89366288 | 7mer-m8 | 89366281 | 89366308 | 152 | -26.57 |
| ADediting_1281386 | chr6_89366283_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-3200-5p | chr6 | 89366281 | 89366287 | 7mer-m8 | 89366280 | 89366298 | 160 | -23.76 |
| ADediting_1281386 | chr6_89366283_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-12119 | chr6 | 89366282 | 89366288 | 7mer-m8 | 89366281 | 89366308 | 152 | -26.57 |
| ADediting_1281386 | chr6_89366283_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-3200-5p | chr6 | 89366281 | 89366287 | 7mer-m8 | 89366280 | 89366298 | 160 | -23.76 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-1343-3p | chr6 | 89366333 | 89366339 | 7mer-m8 | 89366332 | 89366353 | 149 | -16.52 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-3187-5p | chr6 | 89366335 | 89366341 | 7mer-m8 | 89366334 | 89366357 | 155 | -29.5 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4793-5p | chr6 | 89366331 | 89366337 | 7mer-m8 | 89366330 | 89366354 | 159 | -22.85 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-5189-5p | chr6 | 89366335 | 89366341 | 7mer-m8 | 89366334 | 89366356 | 150 | -21.28 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-6783-3p | chr6 | 89366333 | 89366339 | 7mer-m8 | 89366332 | 89366353 | 146 | -17.95 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-6860 | chr6 | 89366335 | 89366341 | 7mer-m8 | 89366334 | 89366354 | 158 | -24.77 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-939-3p | chr6 | 89366333 | 89366340 | 8mer-1a | 89366333 | 89366353 | 140 | -16.13 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-1343-3p | chr6 | 89366333 | 89366339 | 7mer-m8 | 89366332 | 89366353 | 149 | -16.52 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-3187-5p | chr6 | 89366335 | 89366341 | 7mer-m8 | 89366334 | 89366357 | 155 | -29.5 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4793-5p | chr6 | 89366331 | 89366337 | 7mer-m8 | 89366330 | 89366354 | 159 | -22.85 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-5189-5p | chr6 | 89366335 | 89366341 | 7mer-m8 | 89366334 | 89366356 | 150 | -21.28 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-6783-3p | chr6 | 89366333 | 89366339 | 7mer-m8 | 89366332 | 89366353 | 146 | -17.95 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-6860 | chr6 | 89366335 | 89366341 | 7mer-m8 | 89366334 | 89366354 | 158 | -24.77 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-939-3p | chr6 | 89366333 | 89366340 | 8mer-1a | 89366333 | 89366353 | 140 | -16.13 |
| ADediting_1281389 | chr6_89366336_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-7112-5p | chr6 | 89366335 | 89366341 | 7mer-1a | 89366335 | 89366356 | 147 | -27.72 |
| ADediting_1281389 | chr6_89366336_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-7112-5p | chr6 | 89366335 | 89366341 | 7mer-1a | 89366335 | 89366356 | 147 | -27.72 |
| ADediting_1281390 | chr6_89366356_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-340-3p | chr6 | 89366355 | 89366361 | 7mer-m8 | 89366354 | 89366375 | 141 | -16.06 |
| ADediting_1281390 | chr6_89366356_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-6827-3p | chr6 | 89366355 | 89366361 | 7mer-m8 | 89366354 | 89366374 | 147 | -16.55 |
| ADediting_1281390 | chr6_89366356_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-340-3p | chr6 | 89366355 | 89366361 | 7mer-m8 | 89366354 | 89366375 | 141 | -16.06 |
| ADediting_1281390 | chr6_89366356_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-6827-3p | chr6 | 89366355 | 89366361 | 7mer-m8 | 89366354 | 89366374 | 147 | -16.55 |
| ADediting_1281391 | chr6_89366408_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-100-5p | chr6 | 89366405 | 89366411 | 7mer-m8 | 89366404 | 89366425 | 152 | -16.59 |
| ADediting_1281391 | chr6_89366408_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-99a-5p | chr6 | 89366405 | 89366411 | 7mer-m8 | 89366404 | 89366425 | 152 | -16.59 |
| ADediting_1281391 | chr6_89366408_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-99b-5p | chr6 | 89366405 | 89366411 | 7mer-m8 | 89366404 | 89366425 | 145 | -22.44 |
| ADediting_1281391 | chr6_89366408_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-100-5p | chr6 | 89366405 | 89366411 | 7mer-m8 | 89366404 | 89366425 | 152 | -16.59 |
| ADediting_1281391 | chr6_89366408_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-99a-5p | chr6 | 89366405 | 89366411 | 7mer-m8 | 89366404 | 89366425 | 152 | -16.59 |
| ADediting_1281391 | chr6_89366408_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-99b-5p | chr6 | 89366405 | 89366411 | 7mer-m8 | 89366404 | 89366425 | 145 | -22.44 |
| ADediting_1281392 | chr6_89366410_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-17-3p | chr6 | 89366407 | 89366413 | 7mer-m8 | 89366406 | 89366428 | 150 | -21.31 |
| ADediting_1281392 | chr6_89366410_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4277 | chr6 | 89366410 | 89366416 | 7mer-m8 | 89366409 | 89366430 | 148 | -17.47 |
| ADediting_1281392 | chr6_89366410_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-17-3p | chr6 | 89366407 | 89366413 | 7mer-m8 | 89366406 | 89366428 | 150 | -21.31 |
| ADediting_1281392 | chr6_89366410_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4277 | chr6 | 89366410 | 89366416 | 7mer-m8 | 89366409 | 89366430 | 148 | -17.47 |
| ADediting_1281393 | chr6_89366416_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-5690 | chr6 | 89366416 | 89366422 | 7mer-m8 | 89366415 | 89366435 | 150 | -16.63 |
| ADediting_1281393 | chr6_89366416_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-5690 | chr6 | 89366416 | 89366422 | 7mer-m8 | 89366415 | 89366435 | 150 | -16.63 |
| ADediting_1281395 | chr6_89366423_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4441 | chr6 | 89366423 | 89366429 | 7mer-m8 | 89366422 | 89366438 | 145 | -17.91 |
| ADediting_1281395 | chr6_89366423_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-6753-5p | chr6 | 89366420 | 89366427 | 8mer-1a | 89366420 | 89366439 | 152 | -21.44 |
| ADediting_1281395 | chr6_89366423_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-7113-5p | chr6 | 89366422 | 89366428 | 7mer-m8 | 89366421 | 89366440 | 157 | -22.01 |
| ADediting_1281395 | chr6_89366423_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4441 | chr6 | 89366423 | 89366429 | 7mer-m8 | 89366422 | 89366438 | 145 | -17.91 |
| ADediting_1281395 | chr6_89366423_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-6753-5p | chr6 | 89366420 | 89366427 | 8mer-1a | 89366420 | 89366439 | 152 | -21.44 |
| ADediting_1281395 | chr6_89366423_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-7113-5p | chr6 | 89366422 | 89366428 | 7mer-m8 | 89366421 | 89366440 | 157 | -22.01 |
| ADediting_1281397 | chr6_89366437_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-6125 | chr6 | 89366437 | 89366443 | 7mer-m8 | 89366436 | 89366455 | 140 | -20.65 |
| ADediting_1281397 | chr6_89366437_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-6765-5p | chr6 | 89366432 | 89366438 | 7mer-m8 | 89366431 | 89366452 | 149 | -24.18 |
| ADediting_1281397 | chr6_89366437_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-6125 | chr6 | 89366437 | 89366443 | 7mer-m8 | 89366436 | 89366455 | 140 | -20.65 |
| ADediting_1281397 | chr6_89366437_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-6765-5p | chr6 | 89366432 | 89366438 | 7mer-m8 | 89366431 | 89366452 | 149 | -24.18 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-1199-5p | chr6 | 89366449 | 89366455 | 7mer-m8 | 89366448 | 89366467 | 152 | -25.84 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-125a-5p | chr6 | 89366447 | 89366453 | 7mer-m8 | 89366446 | 89366469 | 147 | -21.5 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-125b-5p | chr6 | 89366447 | 89366453 | 7mer-m8 | 89366446 | 89366465 | 149 | -21.82 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-331-3p | chr6 | 89366445 | 89366451 | 7mer-1a | 89366445 | 89366465 | 145 | -25.22 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4319 | chr6 | 89366447 | 89366453 | 7mer-m8 | 89366446 | 89366463 | 148 | -20.99 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-6751-3p | chr6 | 89366449 | 89366455 | 7mer-m8 | 89366448 | 89366468 | 141 | -14.54 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-1199-5p | chr6 | 89366449 | 89366455 | 7mer-m8 | 89366448 | 89366467 | 152 | -25.84 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-125a-5p | chr6 | 89366447 | 89366453 | 7mer-m8 | 89366446 | 89366469 | 147 | -21.5 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-125b-5p | chr6 | 89366447 | 89366453 | 7mer-m8 | 89366446 | 89366465 | 149 | -21.82 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-331-3p | chr6 | 89366445 | 89366451 | 7mer-1a | 89366445 | 89366465 | 145 | -25.22 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4319 | chr6 | 89366447 | 89366453 | 7mer-m8 | 89366446 | 89366463 | 148 | -20.99 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-6751-3p | chr6 | 89366449 | 89366455 | 7mer-m8 | 89366448 | 89366468 | 141 | -14.54 |
| ADediting_1281399 | chr6_89366474_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-6807-5p | chr6 | 89366469 | 89366475 | 7mer-m8 | 89366468 | 89366487 | 146 | -18 |
| ADediting_1281399 | chr6_89366474_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-6807-5p | chr6 | 89366469 | 89366475 | 7mer-m8 | 89366468 | 89366487 | 146 | -18 |
| ADediting_1281400 | chr6_89366479_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-943 | chr6 | 89366476 | 89366482 | 7mer-m8 | 89366475 | 89366497 | 144 | -20.17 |
| ADediting_1281400 | chr6_89366479_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-943 | chr6 | 89366476 | 89366482 | 7mer-m8 | 89366475 | 89366497 | 144 | -20.17 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-25-3p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366498 | 146 | -13.47 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-32-5p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366498 | 140 | -8.28 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-363-3p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366502 | 148 | -13.9 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-367-3p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366498 | 141 | -11.83 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-92a-3p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366502 | 149 | -17.07 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-92b-3p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366498 | 144 | -14.9 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-25-3p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366498 | 146 | -13.47 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-32-5p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366498 | 140 | -8.28 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-363-3p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366502 | 148 | -13.9 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-367-3p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366498 | 141 | -11.83 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-92a-3p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366502 | 149 | -17.07 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-92b-3p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366498 | 144 | -14.9 |
| ADediting_1281402 | chr6_89366490_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-5700 | chr6 | 89366486 | 89366492 | 7mer-m8 | 89366485 | 89366506 | 148 | -11.44 |
| ADediting_1281402 | chr6_89366490_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-586 | chr6 | 89366487 | 89366493 | 7mer-m8 | 89366486 | 89366507 | 146 | -11.55 |
| ADediting_1281402 | chr6_89366490_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-5700 | chr6 | 89366486 | 89366492 | 7mer-m8 | 89366485 | 89366506 | 148 | -11.44 |
| ADediting_1281402 | chr6_89366490_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-586 | chr6 | 89366487 | 89366493 | 7mer-m8 | 89366486 | 89366507 | 146 | -11.55 |
| ADediting_1281403 | chr6_89366492_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-12129 | chr6 | 89366487 | 89366493 | 7mer-m8 | 89366486 | 89366511 | 142 | -13.41 |
| ADediting_1281403 | chr6_89366492_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-508-5p | chr6 | 89366490 | 89366497 | 8mer-1a | 89366490 | 89366514 | 147 | -22.13 |
| ADediting_1281403 | chr6_89366492_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-766-3p | chr6 | 89366492 | 89366498 | 7mer-m8 | 89366491 | 89366513 | 151 | -22.76 |
| ADediting_1281403 | chr6_89366492_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-12129 | chr6 | 89366487 | 89366493 | 7mer-m8 | 89366486 | 89366511 | 142 | -13.41 |
| ADediting_1281403 | chr6_89366492_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-508-5p | chr6 | 89366490 | 89366497 | 8mer-1a | 89366490 | 89366514 | 147 | -22.13 |
| ADediting_1281403 | chr6_89366492_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-766-3p | chr6 | 89366492 | 89366498 | 7mer-m8 | 89366491 | 89366513 | 151 | -22.76 |
| ADediting_1584732 | chr6_89366397_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-7974 | chr6 | 89366394 | 89366401 | 8mer-1a | 89366394 | 89366415 | 148 | -21.45 |
| ADediting_1584732 | chr6_89366397_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-7974 | chr6 | 89366394 | 89366401 | 8mer-1a | 89366394 | 89366415 | 148 | -21.45 |
| ADediting_1662966 | chr6_89366480_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-487b-3p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366499 | 158 | -14.88 |
| ADediting_1662966 | chr6_89366480_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-487b-3p | chr6 | 89366478 | 89366484 | 7mer-m8 | 89366477 | 89366499 | 158 | -14.88 |
| ADediting_1662967 | chr6_89366525_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-3613-3p | chr6 | 89366525 | 89366531 | 7mer-m8 | 89366524 | 89366547 | 162 | -8.51 |
| ADediting_1662967 | chr6_89366525_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-519d-5p | chr6 | 89366522 | 89366528 | 7mer-m8 | 89366521 | 89366545 | 154 | -18.71 |
| ADediting_1662967 | chr6_89366525_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-3613-3p | chr6 | 89366525 | 89366531 | 7mer-m8 | 89366524 | 89366547 | 162 | -8.51 |
| ADediting_1662967 | chr6_89366525_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-519d-5p | chr6 | 89366522 | 89366528 | 7mer-m8 | 89366521 | 89366545 | 154 | -18.71 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1281385 | chr6_89366282_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4310 | chr6 | 89366276 | 89366283 | 8mer-1a | 89366276 | 89366291 | 140 | -8.97 |
| ADediting_1281385 | chr6_89366282_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-7157-5p | chr6 | 89366276 | 89366283 | 8mer-1a | 89366276 | 89366298 | 144 | -18.4 |
| ADediting_1281385 | chr6_89366282_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4310 | chr6 | 89366276 | 89366283 | 8mer-1a | 89366276 | 89366291 | 140 | -8.97 |
| ADediting_1281385 | chr6_89366282_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-7157-5p | chr6 | 89366276 | 89366283 | 8mer-1a | 89366276 | 89366298 | 144 | -18.4 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-635 | chr6 | 89366333 | 89366340 | 8mer-1a | 89366333 | 89366352 | 152 | -16.55 |
| ADediting_1281388 | chr6_89366335_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-635 | chr6 | 89366333 | 89366340 | 8mer-1a | 89366333 | 89366352 | 152 | -16.55 |
| ADediting_1281389 | chr6_89366336_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-635 | chr6 | 89366333 | 89366340 | 8mer-1a | 89366333 | 89366352 | 152 | -16.55 |
| ADediting_1281389 | chr6_89366336_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-635 | chr6 | 89366333 | 89366340 | 8mer-1a | 89366333 | 89366352 | 152 | -16.55 |
| ADediting_1281390 | chr6_89366356_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-5699-3p | chr6 | 89366353 | 89366360 | 8mer-1a | 89366353 | 89366374 | 148 | -16.73 |
| ADediting_1281390 | chr6_89366356_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-6818-3p | chr6 | 89366356 | 89366362 | 7mer-m8 | 89366355 | 89366376 | 140 | -11.38 |
| ADediting_1281390 | chr6_89366356_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-5699-3p | chr6 | 89366353 | 89366360 | 8mer-1a | 89366353 | 89366374 | 148 | -16.73 |
| ADediting_1281390 | chr6_89366356_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-6818-3p | chr6 | 89366356 | 89366362 | 7mer-m8 | 89366355 | 89366376 | 140 | -11.38 |
| ADediting_1281391 | chr6_89366408_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-20b-3p | chr6 | 89366407 | 89366413 | 7mer-m8 | 89366406 | 89366428 | 152 | -14.91 |
| ADediting_1281391 | chr6_89366408_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-20b-3p | chr6 | 89366407 | 89366413 | 7mer-m8 | 89366406 | 89366428 | 152 | -14.91 |
| ADediting_1281392 | chr6_89366410_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-20b-3p | chr6 | 89366407 | 89366413 | 7mer-m8 | 89366406 | 89366428 | 152 | -14.91 |
| ADediting_1281392 | chr6_89366410_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-20b-3p | chr6 | 89366407 | 89366413 | 7mer-m8 | 89366406 | 89366428 | 152 | -14.91 |
| ADediting_1281393 | chr6_89366416_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-3168 | chr6 | 89366410 | 89366417 | 8mer-1a | 89366410 | 89366427 | 142 | -7.5 |
| ADediting_1281393 | chr6_89366416_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-3168 | chr6 | 89366410 | 89366417 | 8mer-1a | 89366410 | 89366427 | 142 | -7.5 |
| ADediting_1281395 | chr6_89366423_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-3162-5p | chr6 | 89366423 | 89366429 | 7mer-m8 | 89366422 | 89366443 | 153 | -25.9 |
| ADediting_1281395 | chr6_89366423_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-3162-5p | chr6 | 89366423 | 89366429 | 7mer-m8 | 89366422 | 89366443 | 153 | -25.9 |
| ADediting_1281396 | chr6_89366432_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4478 | chr6 | 89366428 | 89366434 | 7mer-m8 | 89366427 | 89366444 | 154 | -24.26 |
| ADediting_1281396 | chr6_89366432_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-485-5p | chr6 | 89366427 | 89366433 | 7mer-m8 | 89366426 | 89366447 | 149 | -17.42 |
| ADediting_1281396 | chr6_89366432_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-6884-5p | chr6 | 89366427 | 89366433 | 7mer-m8 | 89366426 | 89366447 | 154 | -21.5 |
| ADediting_1281396 | chr6_89366432_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-7160-5p | chr6 | 89366430 | 89366436 | 7mer-m8 | 89366429 | 89366449 | 146 | -19.39 |
| ADediting_1281396 | chr6_89366432_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4478 | chr6 | 89366428 | 89366434 | 7mer-m8 | 89366427 | 89366444 | 154 | -24.26 |
| ADediting_1281396 | chr6_89366432_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-485-5p | chr6 | 89366427 | 89366433 | 7mer-m8 | 89366426 | 89366447 | 149 | -17.42 |
| ADediting_1281396 | chr6_89366432_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-6884-5p | chr6 | 89366427 | 89366433 | 7mer-m8 | 89366426 | 89366447 | 154 | -21.5 |
| ADediting_1281396 | chr6_89366432_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-7160-5p | chr6 | 89366430 | 89366436 | 7mer-m8 | 89366429 | 89366449 | 146 | -19.39 |
| ADediting_1281397 | chr6_89366437_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-12114 | chr6 | 89366434 | 89366440 | 7mer-m8 | 89366433 | 89366451 | 149 | -17.05 |
| ADediting_1281397 | chr6_89366437_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-3190-3p | chr6 | 89366436 | 89366442 | 7mer-m8 | 89366435 | 89366457 | 145 | -19.12 |
| ADediting_1281397 | chr6_89366437_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-12114 | chr6 | 89366434 | 89366440 | 7mer-m8 | 89366433 | 89366451 | 149 | -17.05 |
| ADediting_1281397 | chr6_89366437_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-3190-3p | chr6 | 89366436 | 89366442 | 7mer-m8 | 89366435 | 89366457 | 145 | -19.12 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-188-5p | chr6 | 89366444 | 89366450 | 7mer-m8 | 89366443 | 89366463 | 147 | -20.43 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-623 | chr6 | 89366445 | 89366451 | 7mer-m8 | 89366444 | 89366470 | 148 | -20.45 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-6866-3p | chr6 | 89366444 | 89366450 | 7mer-m8 | 89366443 | 89366464 | 145 | -18.57 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-188-5p | chr6 | 89366444 | 89366450 | 7mer-m8 | 89366443 | 89366463 | 147 | -20.43 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-623 | chr6 | 89366445 | 89366451 | 7mer-m8 | 89366444 | 89366470 | 148 | -20.45 |
| ADediting_1281398 | chr6_89366449_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-6866-3p | chr6 | 89366444 | 89366450 | 7mer-m8 | 89366443 | 89366464 | 145 | -18.57 |
| ADediting_1281400 | chr6_89366479_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-508-3p | chr6 | 89366476 | 89366483 | 8mer-1a | 89366476 | 89366498 | 144 | -15.22 |
| ADediting_1281400 | chr6_89366479_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-508-3p | chr6 | 89366476 | 89366483 | 8mer-1a | 89366476 | 89366498 | 144 | -15.22 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-508-3p | chr6 | 89366476 | 89366483 | 8mer-1a | 89366476 | 89366498 | 144 | -15.22 |
| ADediting_1281401 | chr6_89366482_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-508-3p | chr6 | 89366476 | 89366483 | 8mer-1a | 89366476 | 89366498 | 144 | -15.22 |
| ADediting_1281402 | chr6_89366490_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-10395-3p | chr6 | 89366488 | 89366494 | 7mer-m8 | 89366487 | 89366509 | 143 | -10.28 |
| ADediting_1281402 | chr6_89366490_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-630 | chr6 | 89366488 | 89366494 | 7mer-1a | 89366488 | 89366511 | 142 | -14.49 |
| ADediting_1281402 | chr6_89366490_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-10395-3p | chr6 | 89366488 | 89366494 | 7mer-m8 | 89366487 | 89366509 | 143 | -10.28 |
| ADediting_1281402 | chr6_89366490_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-630 | chr6 | 89366488 | 89366494 | 7mer-1a | 89366488 | 89366511 | 142 | -14.49 |
| ADediting_1281403 | chr6_89366492_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-10395-3p | chr6 | 89366488 | 89366494 | 7mer-m8 | 89366487 | 89366509 | 143 | -10.28 |
| ADediting_1281403 | chr6_89366492_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-630 | chr6 | 89366488 | 89366494 | 7mer-1a | 89366488 | 89366511 | 142 | -14.49 |
| ADediting_1281403 | chr6_89366492_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-10395-3p | chr6 | 89366488 | 89366494 | 7mer-m8 | 89366487 | 89366509 | 143 | -10.28 |
| ADediting_1281403 | chr6_89366492_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-630 | chr6 | 89366488 | 89366494 | 7mer-1a | 89366488 | 89366511 | 142 | -14.49 |
| ADediting_1281404 | chr6_89366523_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-520f-5p | chr6 | 89366522 | 89366528 | 7mer-m8 | 89366521 | 89366542 | 154 | -16.69 |
| ADediting_1281404 | chr6_89366523_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-520f-5p | chr6 | 89366522 | 89366528 | 7mer-m8 | 89366521 | 89366542 | 154 | -16.69 |
| ADediting_1662966 | chr6_89366480_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-508-3p | chr6 | 89366476 | 89366483 | 8mer-1a | 89366476 | 89366498 | 144 | -15.22 |
| ADediting_1662966 | chr6_89366480_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-508-3p | chr6 | 89366476 | 89366483 | 8mer-1a | 89366476 | 89366498 | 144 | -15.22 |
| ADediting_1662967 | chr6_89366525_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-520f-5p | chr6 | 89366522 | 89366528 | 7mer-m8 | 89366521 | 89366542 | 154 | -16.69 |
| ADediting_1662967 | chr6_89366525_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-520f-5p | chr6 | 89366522 | 89366528 | 7mer-m8 | 89366521 | 89366542 | 154 | -16.69 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-589-3p | chr6 | 89366878 | 89366884 | 7mer-m8 | 89366877 | 89366898 | 154 | -20.2 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-589-3p | chr6 | 89366878 | 89366884 | 7mer-m8 | 89366877 | 89366898 | 154 | -20.2 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4477b | chr6 | 89365316 | 89365323 | 8mer-1a | 89365316 | 89365337 | 140 | -11.02 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4477b | chr6 | 89365853 | 89365859 | 7mer-m8 | 89365852 | 89365874 | 145 | -10.55 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4477b | chr6 | 89366282 | 89366289 | 8mer-1a | 89366282 | 89366303 | 140 | -9.75 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4477b | chr6 | 89365316 | 89365323 | 8mer-1a | 89365316 | 89365337 | 140 | -11.02 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4477b | chr6 | 89365853 | 89365859 | 7mer-m8 | 89365852 | 89365874 | 145 | -10.55 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4477b | chr6 | 89366282 | 89366289 | 8mer-1a | 89366282 | 89366303 | 140 | -9.75 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4477b | chr6 | 89366563 | 89366570 | 8mer-1a | 89366563 | 89366584 | 164 | -16.67 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4477b | chr6 | 89366563 | 89366570 | 8mer-1a | 89366563 | 89366584 | 164 | -16.67 |
| ADediting_286380 | chr11_79422188_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-5579-3p | chr6 | 89366904 | 89366911 | 8mer-1a | 89366904 | 89366925 | 145 | -12.61 |
| ADediting_286380 | chr11_79422188_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-5579-3p | chr6 | 89364917 | 89364923 | 7mer-m8 | 89364916 | 89364937 | 148 | -10.74 |
| ADediting_286380 | chr11_79422188_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-5579-3p | chr6 | 89366904 | 89366911 | 8mer-1a | 89366904 | 89366925 | 145 | -12.61 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4775 | chr6 | 89365106 | 89365112 | 7mer-m8 | 89365105 | 89365132 | 144 | -10.93 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4775 | chr6 | 89367557 | 89367563 | 7mer-m8 | 89367556 | 89367577 | 150 | -9.63 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4775 | chr6 | 89365106 | 89365112 | 7mer-m8 | 89365105 | 89365132 | 144 | -10.93 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4775 | chr6 | 89367557 | 89367563 | 7mer-m8 | 89367556 | 89367577 | 150 | -9.63 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-381-3p | chr6 | 89367862 | 89367869 | 8mer-1a | 89367862 | 89367882 | 141 | -12.01 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-381-3p | chr6 | 89367862 | 89367869 | 8mer-1a | 89367862 | 89367882 | 141 | -12.01 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-381-3p | chr6 | 89367862 | 89367869 | 8mer-1a | 89367862 | 89367882 | 141 | -12.01 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-381-3p | chr6 | 89367862 | 89367869 | 8mer-1a | 89367862 | 89367882 | 141 | -12.01 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-641 | chr6 | 89365501 | 89365507 | 7mer-m8 | 89365500 | 89365523 | 140 | -11.15 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-641 | chr6 | 89368035 | 89368041 | 7mer-m8 | 89368034 | 89368055 | 144 | -15.26 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-641 | chr6 | 89365501 | 89365507 | 7mer-m8 | 89365500 | 89365523 | 140 | -11.15 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-641 | chr6 | 89368035 | 89368041 | 7mer-m8 | 89368034 | 89368055 | 144 | -15.26 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-641 | chr6 | 89365501 | 89365507 | 7mer-m8 | 89365500 | 89365523 | 140 | -11.15 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-641 | chr6 | 89368035 | 89368041 | 7mer-m8 | 89368034 | 89368055 | 144 | -15.26 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-641 | chr6 | 89365501 | 89365507 | 7mer-m8 | 89365500 | 89365523 | 140 | -11.15 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-641 | chr6 | 89368035 | 89368041 | 7mer-m8 | 89368034 | 89368055 | 144 | -15.26 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4775 | chr6 | 89366742 | 89366748 | 7mer-1a | 89366742 | 89366761 | 148 | -14.92 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000025039.15 | ENST00000359203.3 | RRAGD-201 | hsa-miR-4775 | chr6 | 89367630 | 89367636 | 7mer-1a | 89367630 | 89367651 | 142 | -8.51 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4775 | chr6 | 89366742 | 89366748 | 7mer-1a | 89366742 | 89366761 | 148 | -14.92 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000025039.15 | ENST00000369415.9 | RRAGD-202 | hsa-miR-4775 | chr6 | 89367630 | 89367636 | 7mer-1a | 89367630 | 89367651 | 142 | -8.51 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for RRAGD |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000369415.9 | protein_coding |  |  |
| ENST00000359203.3 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1281384 | ENST00000369415.9 | chr6_89366271_- | 3268 | -1428.40 | -1426.80 | -1459.14 |
| ADediting_1281385 | ENST00000369415.9 | chr6_89366282_- | 3257 | -1426.80 | -1426.80 | -1459.14 |
| ADediting_1281386 | ENST00000369415.9 | chr6_89366283_- | 3256 | -1428.70 | -1426.80 | -1459.14 |
| ADediting_1281387 | ENST00000369415.9 | chr6_89366325_- | 3214 | -1426.10 | -1426.80 | -1459.14 |
| ADediting_1281388 | ENST00000369415.9 | chr6_89366335_- | 3204 | -1428.00 | -1426.80 | -1459.14 |
| ADediting_1281389 | ENST00000369415.9 | chr6_89366336_- | 3203 | -1426.50 | -1426.80 | -1459.14 |
| ADediting_1281390 | ENST00000369415.9 | chr6_89366356_- | 3183 | -1426.80 | -1426.80 | -1459.14 |
| ADediting_1584732 | ENST00000369415.9 | chr6_89366397_- | 3142 | -1426.80 | -1426.80 | -1459.14 |
| ADediting_1281391 | ENST00000369415.9 | chr6_89366408_- | 3131 | -1430.50 | -1426.80 | -1459.14 |
| ADediting_1281392 | ENST00000369415.9 | chr6_89366410_- | 3129 | -1426.80 | -1426.80 | -1459.14 |
| ADediting_1281393 | ENST00000369415.9 | chr6_89366416_- | 3123 | -1426.80 | -1426.80 | -1459.14 |
| ADediting_1281394 | ENST00000369415.9 | chr6_89366420_- | 3119 | -1427.80 | -1426.80 | -1459.14 |
| ADediting_1281395 | ENST00000369415.9 | chr6_89366423_- | 3116 | -1426.80 | -1426.80 | -1459.14 |
| ADediting_1281396 | ENST00000369415.9 | chr6_89366432_- | 3107 | -1427.90 | -1426.80 | -1459.14 |
| ADediting_1281397 | ENST00000369415.9 | chr6_89366437_- | 3102 | -1426.80 | -1426.80 | -1459.14 |
| ADediting_1281398 | ENST00000369415.9 | chr6_89366449_- | 3090 | -1430.50 | -1426.80 | -1459.14 |
| ADediting_1281399 | ENST00000369415.9 | chr6_89366474_- | 3065 | -1427.40 | -1426.80 | -1459.14 |
| ADediting_1281400 | ENST00000369415.9 | chr6_89366479_- | 3060 | -1429.00 | -1426.80 | -1459.14 |
| ADediting_1662966 | ENST00000369415.9 | chr6_89366480_- | 3059 | -1426.70 | -1426.80 | -1459.14 |
| ADediting_1281401 | ENST00000369415.9 | chr6_89366482_- | 3057 | -1427.10 | -1426.80 | -1459.14 |
| ADediting_1281402 | ENST00000369415.9 | chr6_89366490_- | 3049 | -1429.90 | -1426.80 | -1459.14 |
| ADediting_1281403 | ENST00000369415.9 | chr6_89366492_- | 3047 | -1428.20 | -1426.80 | -1459.14 |
| ADediting_1584733 | ENST00000369415.9 | chr6_89366512_- | 3027 | -1429.00 | -1426.80 | -1459.14 |
| ADediting_1281404 | ENST00000369415.9 | chr6_89366523_- | 3016 | -1428.80 | -1426.80 | -1459.14 |
| ADediting_1662967 | ENST00000369415.9 | chr6_89366525_- | 3014 | -1430.10 | -1426.80 | -1459.14 |
| ADediting_1281384 | ENST00000359203.3 | chr6_89366271_- | 2769 | -1135.30 | -1134.70 | -1165.54 |
| ADediting_1281385 | ENST00000359203.3 | chr6_89366282_- | 2758 | -1134.80 | -1134.70 | -1165.54 |
| ADediting_1281386 | ENST00000359203.3 | chr6_89366283_- | 2757 | -1134.70 | -1134.70 | -1165.54 |
| ADediting_1281387 | ENST00000359203.3 | chr6_89366325_- | 2715 | -1136.40 | -1134.70 | -1165.54 |
| ADediting_1281388 | ENST00000359203.3 | chr6_89366335_- | 2705 | -1138.90 | -1134.70 | -1165.54 |
| ADediting_1281389 | ENST00000359203.3 | chr6_89366336_- | 2704 | -1138.90 | -1134.70 | -1165.54 |
| ADediting_1281390 | ENST00000359203.3 | chr6_89366356_- | 2684 | -1133.90 | -1134.70 | -1165.54 |
| ADediting_1584732 | ENST00000359203.3 | chr6_89366397_- | 2643 | -1134.70 | -1134.70 | -1165.54 |
| ADediting_1281391 | ENST00000359203.3 | chr6_89366408_- | 2632 | -1138.60 | -1134.70 | -1165.54 |
| ADediting_1281392 | ENST00000359203.3 | chr6_89366410_- | 2630 | -1134.80 | -1134.70 | -1165.54 |
| ADediting_1281393 | ENST00000359203.3 | chr6_89366416_- | 2624 | -1135.90 | -1134.70 | -1165.54 |
| ADediting_1281394 | ENST00000359203.3 | chr6_89366420_- | 2620 | -1134.40 | -1134.70 | -1165.54 |
| ADediting_1281395 | ENST00000359203.3 | chr6_89366423_- | 2617 | -1134.70 | -1134.70 | -1165.54 |
| ADediting_1281396 | ENST00000359203.3 | chr6_89366432_- | 2608 | -1133.70 | -1134.70 | -1165.54 |
| ADediting_1281397 | ENST00000359203.3 | chr6_89366437_- | 2603 | -1134.30 | -1134.70 | -1165.54 |
| ADediting_1281398 | ENST00000359203.3 | chr6_89366449_- | 2591 | -1135.30 | -1134.70 | -1165.54 |
| ADediting_1281399 | ENST00000359203.3 | chr6_89366474_- | 2566 | -1134.70 | -1134.70 | -1165.54 |
| ADediting_1281400 | ENST00000359203.3 | chr6_89366479_- | 2561 | -1135.00 | -1134.70 | -1165.54 |
| ADediting_1662966 | ENST00000359203.3 | chr6_89366480_- | 2560 | -1134.40 | -1134.70 | -1165.54 |
| ADediting_1281401 | ENST00000359203.3 | chr6_89366482_- | 2558 | -1134.80 | -1134.70 | -1165.54 |
| ADediting_1281402 | ENST00000359203.3 | chr6_89366490_- | 2550 | -1137.20 | -1134.70 | -1165.54 |
| ADediting_1281403 | ENST00000359203.3 | chr6_89366492_- | 2548 | -1136.30 | -1134.70 | -1165.54 |
| ADediting_1584733 | ENST00000359203.3 | chr6_89366512_- | 2528 | -1137.10 | -1134.70 | -1165.54 |
| ADediting_1281404 | ENST00000359203.3 | chr6_89366523_- | 2517 | -1137.24 | -1134.70 | -1165.54 |
| ADediting_1662967 | ENST00000359203.3 | chr6_89366525_- | 2515 | -1136.60 | -1134.70 | -1165.54 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for RRAGD |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1281384 | chr6_89366271_- | 0.000807926463154412 | 0.270671651282318 | 1.0732632777954e-08 | 0.445924699363354 | 0.000518443410455339 | 0.280059073135158 |
| CER | ADediting_1281385 | chr6_89366282_- | 0.000538641623588416 | 0.279263221500751 | 9.65165301607375e-08 | 0.418771323762677 | 0.00119145233147846 | 0.262168783650352 |
| CER | ADediting_1281387 | chr6_89366325_- | 0.000161708287981699 | 0.303263266800542 | 5.25887860146783e-11 | 0.503244401950549 | 0.00508722120210585 | 0.227631521297881 |
| CER | ADediting_1281388 | chr6_89366335_- | 7.19514311869822e-06 | 0.357252237339194 | 2.98181821264168e-15 | 0.586838789041787 | 2.38676922133748e-05 | 0.337628730872301 |
| CER | ADediting_1281390 | chr6_89366356_- | 0.000121449262255826 | 0.308678605522419 | 1.8066866752594e-12 | 0.534743150665267 | 0.000279070079773245 | 0.292639682610234 |
| CER | ADediting_1281391 | chr6_89366408_- | 0.000469026256062288 | 0.282133848814623 | 3.45992380203165e-07 | 0.401814804997791 | 0.00106823198984273 | 0.264586372088898 |
| CER | ADediting_1281392 | chr6_89366410_- | 0.000733156091948227 | 0.272755074103379 | 8.65936622636815e-12 | 0.520501014603448 | 0.000752548257782371 | 0.272196602498737 |
| CER | ADediting_1281393 | chr6_89366416_- | 3.2024750880064e-05 | 0.332609425528126 | 1.95246652721097e-14 | 0.572481018144891 | 0.000195313138017219 | 0.299633381700435 |
| IFG | ADediting_1281393 | chr6_89366416_- | 0.0288526168009311 | 0.437213052655151 | 0.0400808468396098 | 0.41318367381359 | 0.0927365099774185 | 0.34349376004392 |
| CER | ADediting_1281394 | chr6_89366420_- | 0.000200792824597701 | 0.299097415691243 | 1.38794579778128e-12 | 0.537075321881252 | 0.000173303235259909 | 0.301937461254467 |
| CER | ADediting_1281395 | chr6_89366423_- | 0.00421296249467626 | 0.232397879905824 | 9.62343380561555e-06 | 0.352612349236556 | 0.00241146273405041 | 0.245983897844867 |
| CER | ADediting_1281397 | chr6_89366437_- | 0.000497413121667748 | 0.280918703323968 | 1.93446959597829e-13 | 0.553958689258584 | 0.00115810154297671 | 0.262799678482104 |
| CER | ADediting_1281399 | chr6_89366474_- | 0.0160789356573217 | 0.196266790390334 | 1.35487978899414e-05 | 0.34705874394581 | 0.000803606384848443 | 0.270787103766106 |
| CER | ADediting_1281401 | chr6_89366482_- | 0.0100488227383347 | 0.209591558242781 | 3.56286157908365e-08 | 0.431387393616846 | 0.00110038694619742 | 0.263931816594805 |
| CER | ADediting_1281402 | chr6_89366490_- | 0.00313941130904281 | 0.23965257365607 | 5.10491050297739e-09 | 0.454597746290434 | 0.000514607308936135 | 0.280213448391588 |
| DLPFC | ADediting_1281431 | chr6_89402102_- | 0.805798949584799 | 0.0140192458310462 | 0.161228567464587 | -0.0797640979141036 | 3.20949662381973e-09 | 0.328226782521492 |
| DLPFC | ADediting_1281432 | chr6_89402185_- | 0.301661162862759 | 0.0588503911002571 | 0.061603714433781 | -0.106288341643229 | 7.78088986222509e-21 | 0.49802343350107 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 5.57100374674168e-61 | 0.765685792450957 | 1.19563908089061e-39 | 0.656814988335521 | 0.884625974825866 | -0.00827484103718382 |
| AC | 1.50016719208666e-101 | 0.917922258714941 | 1.4306991273379e-66 | 0.835955345377177 | 4.71136333215338e-08 | 0.336972238951277 |
| PCC | 1.03264349182958e-57 | 0.862161387020657 | 5.24360034259947e-53 | 0.84392096003464 | 0.0154231140575934 | 0.175064094861301 |
| CER | 3.70581746818079e-54 | 0.896391225148421 | 2.05407342703889e-34 | 0.798354189465199 | 0.101367006994544 | 0.134280347512646 |
| TCX | 1.1974986049045e-23 | 0.702797459427863 | 2.15960038552813e-07 | 0.408184264077261 | 0.00010134551288968 | 0.312048249785087 |
| FP | 1.37996172017188e-13 | 0.517599274928257 | 1.21611689939922e-21 | 0.636927540713974 | 0.968465609389586 | -0.00298412549340069 |
| IFG | 9.08241132942598e-05 | 0.7023411970738 | 0.00867044469392887 | 0.513397626414299 | 0.652207108002622 | 0.0947890452762085 |
| PG | 3.57519636358135e-53 | 0.850266890431014 | 4.04245748480917e-24 | 0.654477070073174 | 0.740017451093308 | -0.0244924336115563 |
| STG | 2.40990561794151e-12 | 0.672717231814063 | 7.78728544507687e-11 | 0.636305588592008 | 0.199737362303549 | -0.141324613936576 |
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Relation with AD stages for RRAGD |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1281387 | chr6_89366325_- | 0.000553906184225498 | 0.326912694897395 |
| CER | ADediting_1281388 | chr6_89366335_- | 2.47304823560731e-07 | 0.472233826299541 |
| CER | ADediting_1281390 | chr6_89366356_- | 1.62018665690767e-06 | 0.442564760669983 |
| CER | ADediting_1281392 | chr6_89366410_- | 0.000128622524206262 | 0.360197487172482 |
| CER | ADediting_1281393 | chr6_89366416_- | 7.01828602211647e-05 | 0.372997598461793 |
| CER | ADediting_1281394 | chr6_89366420_- | 0.000308838340624504 | 0.340677176891227 |
| CER | ADediting_1281397 | chr6_89366437_- | 5.71154923227733e-06 | 0.420986057468627 |
| CER | ADediting_1281401 | chr6_89366482_- | 1.61794605542105e-05 | 0.401958406526866 |
| CER | ADediting_1281402 | chr6_89366490_- | 1.26523114571726e-05 | 0.406557682333692 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 0.000114035413370984 | 0.362784126423566 |
| STG | 0.0031916485681622 | -0.31808965953144 |
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RelatedDrugs for RRAGD |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RRAGD |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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