|
||||||
|
 | |
| |
| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
| |
| |
| The effects of the RNA editing to the stability of the RNA structures |
| |
| |
| |
|
Gene summary for ABCD4 |
 Gene summary |
| Gene information | Gene symbol | ABCD4 | Gene ID | 5826 |
| Gene name | ATP binding cassette subfamily D member 4 | |
| Synonyms | ABC41|EST352188|MAHCJ|P70R|P79R|PMP69|PXMP1L | |
| Cytomap | 14q24.3 | |
| Type of gene | protein-coding | |
| Description | ATP-binding cassette sub-family D member 469 kDa peroxisomal ABC-transporterATP-binding cassette, sub-family D (ALD), member 4PMP70-related proteinPXMP1-Lperoxisomal membrane protein 69 | |
| Modification date | 20200313 | |
| UniProtAcc | O14678, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for ABCD4 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_450900(74288946, -), ADediting_450901(74289000, -), ADediting_450902(74289026, -), ADediting_450903(74289030, -), ADediting_450904(74289043, -), ADediting_450905(74289049, -), ADediting_450906(74290748, -), ADediting_450907(74290752, -), ADediting_450908(74290777, -), ADediting_450909(74290781, -), ADediting_450910(74290782, -), ADediting_450911(74290792, -), ADediting_450912(74290793, -), ADediting_450913(74290821, -), ADediting_450914(74290822, -), ADediting_450915(74290866, -), ADediting_450916(74290872, -), ADediting_450917(74290876, -), ADediting_450918(74290948, -), ADediting_450919(74294058, -), ADediting_450920(74294126, -), ADediting_450921(74295766, -), ADediting_450922(74296789, -), ADediting_450923(74296901, -), ADediting_450924(74297596, -), ADediting_450925(74297611, -), ADediting_450926(74297646, -), ADediting_450927(74297684, -), ADediting_450928(74297691, -), ADediting_450929(74297692, -), ADediting_450930(74297698, -), ADediting_450931(74297873, -), ADediting_450932(74298293, -), ADediting_450933(74298339, -), ADediting_450934(74298340, -), ADediting_450935(74298377, -), ADediting_450936(74298400, -), ADediting_450937(74298444, -), ADediting_450938(74298453, -), ADediting_450939(74298474, -), ADediting_450940(74298529, -), ADediting_450941(74299817, -), ADediting_450942(74299827, -), ADediting_450943(74299845, -), ADediting_450944(74299870, -), ADediting_450945(74299890, -), ADediting_450946(74299895, -), ADediting_450947(74299896, -), ADediting_450948(74299938, -), ADediting_450949(74299941, -), ADediting_450950(74299951, -), ADediting_450951(74299980, -), ADediting_450952(74299981, -), ADediting_450953(74300001, -), ADediting_450954(74300011, -), ADediting_450955(74300016, -), ADediting_450956(74300021, -), ADediting_450957(74300480, -), ADediting_450958(74300505, -), ADediting_450959(74300516, -), ADediting_450960(74300529, -), ADediting_450961(74300545, -), ADediting_450962(74300546, -), ADediting_450963(74300553, -), ADediting_450964(74300955, -), ADediting_450965(74300977, -), ADediting_450966(74300990, -), ADediting_450967(74300991, -), ADediting_450968(74301017, -), ADediting_450969(74301026, -), ADediting_450970(74301030, -), ADediting_450971(74301031, -), ADediting_450972(74301032, -), ADediting_450973(74301035, -), ADediting_450974(74301081, -), ADediting_450975(74301086, -), ADediting_450976(74301149, -), ADediting_450977(74301245, -), ADediting_450978(74301284, -), ADediting_450979(74301306, -), ADediting_450980(74301319, -), ADediting_450981(74301324, -), ADediting_450982(74301342, -), ADediting_450983(74301379, -), ADediting_450984(74301439, -), ADediting_450985(74301685, -), ADediting_450986(74301690, -), ADediting_450987(74301695, -), ADediting_450988(74301702, -), ADediting_450989(74301733, -), ADediting_450990(74301737, -), ADediting_450991(74301753, -), ADediting_450992(74301757, -), ADediting_450993(74301761, -), ADediting_450994(74301777, -), ADediting_450995(74301779, -), ADediting_450996(74301789, -), ADediting_450997(74301818, -), ADediting_450998(74301819, -), ADediting_450999(74301855, -), ADediting_451000(74301861, -), ADediting_451001(74301869, -), ADediting_1537824(74287459, -), ADediting_1537825(74287478, -), ADediting_1537826(74288949, -), ADediting_1537827(74289050, -), ADediting_1537828(74290790, -), ADediting_1537829(74298478, -), ADediting_1537830(74298521, -), ADediting_1537831(74298543, -), ADediting_1537832(74299853, -), ADediting_1537833(74299894, -), ADediting_1537834(74299925, -), ADediting_1537835(74300017, -), ADediting_1537836(74300470, -), ADediting_1537837(74300920, -), ADediting_1537838(74300958, -), ADediting_1537839(74301021, -), ADediting_1537840(74301028, -), ADediting_1537841(74301285, -), ADediting_1537842(74301378, -), ADediting_1537843(74301406, -), ADediting_1537844(74301801, -), ADediting_1537845(74301836, -), |
Top |
RNA editing positional annotations for ABCD4 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_450900 | chr14_74288946_- | intronic |
| ADediting_450901 | chr14_74289000_- | intronic |
| ADediting_450902 | chr14_74289026_- | intronic |
| ADediting_450903 | chr14_74289030_- | intronic |
| ADediting_450904 | chr14_74289043_- | intronic |
| ADediting_450905 | chr14_74289049_- | intronic |
| ADediting_450906 | chr14_74290748_- | ncRNA_intronic |
| ADediting_450907 | chr14_74290752_- | ncRNA_intronic |
| ADediting_450908 | chr14_74290777_- | ncRNA_intronic |
| ADediting_450909 | chr14_74290781_- | ncRNA_intronic |
| ADediting_450910 | chr14_74290782_- | ncRNA_intronic |
| ADediting_450911 | chr14_74290792_- | ncRNA_intronic |
| ADediting_450912 | chr14_74290793_- | ncRNA_intronic |
| ADediting_450913 | chr14_74290821_- | ncRNA_intronic |
| ADediting_450914 | chr14_74290822_- | ncRNA_intronic |
| ADediting_450915 | chr14_74290866_- | ncRNA_intronic |
| ADediting_450916 | chr14_74290872_- | ncRNA_intronic |
| ADediting_450917 | chr14_74290876_- | ncRNA_intronic |
| ADediting_450918 | chr14_74290948_- | ncRNA_intronic |
| ADediting_450919 | chr14_74294058_- | ncRNA_exonic |
| ADediting_450920 | chr14_74294126_- | ncRNA_exonic |
| ADediting_450921 | chr14_74295766_- | intronic |
| ADediting_450922 | chr14_74296789_- | intronic |
| ADediting_450923 | chr14_74296901_- | intronic |
| ADediting_450924 | chr14_74297596_- | intronic |
| ADediting_450925 | chr14_74297611_- | intronic |
| ADediting_450926 | chr14_74297646_- | UTR3 |
| ADediting_450927 | chr14_74297684_- | UTR3 |
| ADediting_450928 | chr14_74297691_- | UTR3 |
| ADediting_450929 | chr14_74297692_- | UTR3 |
| ADediting_450930 | chr14_74297698_- | UTR3 |
| ADediting_450931 | chr14_74297873_- | UTR3 |
| ADediting_450932 | chr14_74298293_- | intronic |
| ADediting_450933 | chr14_74298339_- | intronic |
| ADediting_450934 | chr14_74298340_- | intronic |
| ADediting_450935 | chr14_74298377_- | intronic |
| ADediting_450936 | chr14_74298400_- | intronic |
| ADediting_450937 | chr14_74298444_- | intronic |
| ADediting_450938 | chr14_74298453_- | intronic |
| ADediting_450939 | chr14_74298474_- | intronic |
| ADediting_450940 | chr14_74298529_- | intronic |
| ADediting_450941 | chr14_74299817_- | intronic |
| ADediting_450942 | chr14_74299827_- | intronic |
| ADediting_450943 | chr14_74299845_- | intronic |
| ADediting_450944 | chr14_74299870_- | intronic |
| ADediting_450945 | chr14_74299890_- | intronic |
| ADediting_450946 | chr14_74299895_- | intronic |
| ADediting_450947 | chr14_74299896_- | intronic |
| ADediting_450948 | chr14_74299938_- | intronic |
| ADediting_450949 | chr14_74299941_- | intronic |
| ADediting_450950 | chr14_74299951_- | intronic |
| ADediting_450951 | chr14_74299980_- | intronic |
| ADediting_450952 | chr14_74299981_- | intronic |
| ADediting_450953 | chr14_74300001_- | intronic |
| ADediting_450954 | chr14_74300011_- | intronic |
| ADediting_450955 | chr14_74300016_- | intronic |
| ADediting_450956 | chr14_74300021_- | intronic |
| ADediting_450957 | chr14_74300480_- | intronic |
| ADediting_450958 | chr14_74300505_- | intronic |
| ADediting_450959 | chr14_74300516_- | intronic |
| ADediting_450960 | chr14_74300529_- | intronic |
| ADediting_450961 | chr14_74300545_- | intronic |
| ADediting_450962 | chr14_74300546_- | intronic |
| ADediting_450963 | chr14_74300553_- | intronic |
| ADediting_450964 | chr14_74300955_- | intronic |
| ADediting_450965 | chr14_74300977_- | intronic |
| ADediting_450966 | chr14_74300990_- | intronic |
| ADediting_450967 | chr14_74300991_- | intronic |
| ADediting_450968 | chr14_74301017_- | intronic |
| ADediting_450969 | chr14_74301026_- | intronic |
| ADediting_450970 | chr14_74301030_- | intronic |
| ADediting_450971 | chr14_74301031_- | intronic |
| ADediting_450972 | chr14_74301032_- | intronic |
| ADediting_450973 | chr14_74301035_- | intronic |
| ADediting_450974 | chr14_74301081_- | intronic |
| ADediting_450975 | chr14_74301086_- | intronic |
| ADediting_450976 | chr14_74301149_- | intronic |
| ADediting_450977 | chr14_74301245_- | intronic |
| ADediting_450978 | chr14_74301284_- | intronic |
| ADediting_450979 | chr14_74301306_- | intronic |
| ADediting_450980 | chr14_74301319_- | intronic |
| ADediting_450981 | chr14_74301324_- | intronic |
| ADediting_450982 | chr14_74301342_- | intronic |
| ADediting_450983 | chr14_74301379_- | intronic |
| ADediting_450984 | chr14_74301439_- | intronic |
| ADediting_450985 | chr14_74301685_- | intronic |
| ADediting_450986 | chr14_74301690_- | intronic |
| ADediting_450987 | chr14_74301695_- | intronic |
| ADediting_450988 | chr14_74301702_- | intronic |
| ADediting_450989 | chr14_74301733_- | intronic |
| ADediting_450990 | chr14_74301737_- | intronic |
| ADediting_450991 | chr14_74301753_- | intronic |
| ADediting_450992 | chr14_74301757_- | intronic |
| ADediting_450993 | chr14_74301761_- | intronic |
| ADediting_450994 | chr14_74301777_- | intronic |
| ADediting_450995 | chr14_74301779_- | intronic |
| ADediting_450996 | chr14_74301789_- | intronic |
| ADediting_450997 | chr14_74301818_- | intronic |
| ADediting_450998 | chr14_74301819_- | intronic |
| ADediting_450999 | chr14_74301855_- | intronic |
| ADediting_451000 | chr14_74301861_- | intronic |
| ADediting_451001 | chr14_74301869_- | intronic |
| ADediting_1537824 | chr14_74287459_- | intronic |
| ADediting_1537825 | chr14_74287478_- | intronic |
| ADediting_1537826 | chr14_74288949_- | intronic |
| ADediting_1537827 | chr14_74289050_- | intronic |
| ADediting_1537828 | chr14_74290790_- | ncRNA_intronic |
| ADediting_1537829 | chr14_74298478_- | intronic |
| ADediting_1537830 | chr14_74298521_- | intronic |
| ADediting_1537831 | chr14_74298543_- | intronic |
| ADediting_1537832 | chr14_74299853_- | intronic |
| ADediting_1537833 | chr14_74299894_- | intronic |
| ADediting_1537834 | chr14_74299925_- | intronic |
| ADediting_1537835 | chr14_74300017_- | intronic |
| ADediting_1537836 | chr14_74300470_- | intronic |
| ADediting_1537837 | chr14_74300920_- | intronic |
| ADediting_1537838 | chr14_74300958_- | intronic |
| ADediting_1537839 | chr14_74301021_- | intronic |
| ADediting_1537840 | chr14_74301028_- | intronic |
| ADediting_1537841 | chr14_74301285_- | intronic |
| ADediting_1537842 | chr14_74301378_- | intronic |
| ADediting_1537843 | chr14_74301406_- | intronic |
| ADediting_1537844 | chr14_74301801_- | intronic |
| ADediting_1537845 | chr14_74301836_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_450900 | chr14_74288946_- | SINE | Alu | Name=AluSg |
| ADediting_450901 | chr14_74289000_- | SINE | Alu | Name=AluSg |
| ADediting_450902 | chr14_74289026_- | SINE | Alu | Name=AluSg |
| ADediting_450903 | chr14_74289030_- | SINE | Alu | Name=AluSg |
| ADediting_450904 | chr14_74289043_- | SINE | Alu | Name=AluSg |
| ADediting_450905 | chr14_74289049_- | SINE | Alu | Name=AluSg |
| ADediting_450906 | chr14_74290748_- | SINE | Alu | Name=AluSx1 |
| ADediting_450907 | chr14_74290752_- | SINE | Alu | Name=AluSx1 |
| ADediting_450908 | chr14_74290777_- | SINE | Alu | Name=AluSx1 |
| ADediting_450909 | chr14_74290781_- | SINE | Alu | Name=AluSx1 |
| ADediting_450910 | chr14_74290782_- | SINE | Alu | Name=AluSx1 |
| ADediting_450911 | chr14_74290792_- | SINE | Alu | Name=AluSx1 |
| ADediting_450912 | chr14_74290793_- | SINE | Alu | Name=AluSx1 |
| ADediting_450913 | chr14_74290821_- | SINE | Alu | Name=AluSx1 |
| ADediting_450914 | chr14_74290822_- | SINE | Alu | Name=AluSx1 |
| ADediting_450915 | chr14_74290866_- | SINE | Alu | Name=AluSx1 |
| ADediting_450916 | chr14_74290872_- | SINE | Alu | Name=AluSx1 |
| ADediting_450917 | chr14_74290876_- | SINE | Alu | Name=AluSx1 |
| ADediting_450918 | chr14_74290948_- | SINE | Alu | Name=AluSx1 |
| ADediting_450919 | chr14_74294058_- | SINE | Alu | Name=AluSx1 |
| ADediting_450920 | chr14_74294126_- | SINE | Alu | Name=AluSx1 |
| ADediting_450921 | chr14_74295766_- | SINE | MIR | Name=MIR |
| ADediting_450923 | chr14_74296901_- | SINE | Alu | Name=AluSx3 |
| ADediting_450924 | chr14_74297596_- | SINE | Alu | Name=FAM |
| ADediting_450925 | chr14_74297611_- | SINE | Alu | Name=FAM |
| ADediting_450926 | chr14_74297646_- | SINE | Alu | Name=FAM |
| ADediting_450927 | chr14_74297684_- | SINE | Alu | Name=FAM |
| ADediting_450928 | chr14_74297691_- | SINE | Alu | Name=FAM |
| ADediting_450929 | chr14_74297692_- | SINE | Alu | Name=FAM |
| ADediting_450930 | chr14_74297698_- | SINE | Alu | Name=FAM |
| ADediting_450932 | chr14_74298293_- | SINE | Alu | Name=AluSp |
| ADediting_450933 | chr14_74298339_- | SINE | Alu | Name=AluSp |
| ADediting_450934 | chr14_74298340_- | SINE | Alu | Name=AluSp |
| ADediting_450935 | chr14_74298377_- | SINE | Alu | Name=AluSp |
| ADediting_450936 | chr14_74298400_- | SINE | Alu | Name=AluSp |
| ADediting_450937 | chr14_74298444_- | SINE | Alu | Name=AluSp |
| ADediting_450938 | chr14_74298453_- | SINE | Alu | Name=AluSp |
| ADediting_450939 | chr14_74298474_- | SINE | Alu | Name=AluSp |
| ADediting_450940 | chr14_74298529_- | SINE | Alu | Name=AluSp |
| ADediting_450941 | chr14_74299817_- | SINE | Alu | Name=AluSq |
| ADediting_450942 | chr14_74299827_- | SINE | Alu | Name=AluSq |
| ADediting_450943 | chr14_74299845_- | SINE | Alu | Name=AluSq |
| ADediting_450944 | chr14_74299870_- | SINE | Alu | Name=AluSq |
| ADediting_450945 | chr14_74299890_- | SINE | Alu | Name=AluSq |
| ADediting_450946 | chr14_74299895_- | SINE | Alu | Name=AluSq |
| ADediting_450947 | chr14_74299896_- | SINE | Alu | Name=AluSq |
| ADediting_450948 | chr14_74299938_- | SINE | Alu | Name=AluSq |
| ADediting_450949 | chr14_74299941_- | SINE | Alu | Name=AluSq |
| ADediting_450950 | chr14_74299951_- | SINE | Alu | Name=AluSq |
| ADediting_450951 | chr14_74299980_- | SINE | Alu | Name=AluSq |
| ADediting_450952 | chr14_74299981_- | SINE | Alu | Name=AluSq |
| ADediting_450953 | chr14_74300001_- | SINE | Alu | Name=AluSq |
| ADediting_450954 | chr14_74300011_- | SINE | Alu | Name=AluSq |
| ADediting_450955 | chr14_74300016_- | SINE | Alu | Name=AluSq |
| ADediting_450956 | chr14_74300021_- | SINE | Alu | Name=AluSq |
| ADediting_450957 | chr14_74300480_- | SINE | Alu | Name=AluSp |
| ADediting_450958 | chr14_74300505_- | SINE | Alu | Name=AluSp |
| ADediting_450959 | chr14_74300516_- | SINE | Alu | Name=AluSp |
| ADediting_450960 | chr14_74300529_- | SINE | Alu | Name=AluSp |
| ADediting_450961 | chr14_74300545_- | SINE | Alu | Name=AluSp |
| ADediting_450962 | chr14_74300546_- | SINE | Alu | Name=AluSp |
| ADediting_450963 | chr14_74300553_- | SINE | Alu | Name=AluSp |
| ADediting_450964 | chr14_74300955_- | SINE | Alu | Name=AluSq2 |
| ADediting_450965 | chr14_74300977_- | SINE | Alu | Name=AluSq2 |
| ADediting_450966 | chr14_74300990_- | SINE | Alu | Name=AluSq2 |
| ADediting_450967 | chr14_74300991_- | SINE | Alu | Name=AluSq2 |
| ADediting_450968 | chr14_74301017_- | SINE | Alu | Name=AluSq2 |
| ADediting_450969 | chr14_74301026_- | SINE | Alu | Name=AluSq2 |
| ADediting_450970 | chr14_74301030_- | SINE | Alu | Name=AluSq2 |
| ADediting_450971 | chr14_74301031_- | SINE | Alu | Name=AluSq2 |
| ADediting_450972 | chr14_74301032_- | SINE | Alu | Name=AluSq2 |
| ADediting_450973 | chr14_74301035_- | SINE | Alu | Name=AluSq2 |
| ADediting_450974 | chr14_74301081_- | SINE | Alu | Name=AluSq2 |
| ADediting_450975 | chr14_74301086_- | SINE | Alu | Name=AluSq2 |
| ADediting_450976 | chr14_74301149_- | SINE | Alu | Name=AluSq2 |
| ADediting_450977 | chr14_74301245_- | SINE | Alu | Name=AluSz |
| ADediting_450978 | chr14_74301284_- | SINE | Alu | Name=AluSz |
| ADediting_450979 | chr14_74301306_- | SINE | Alu | Name=AluSz |
| ADediting_450980 | chr14_74301319_- | SINE | Alu | Name=AluSz |
| ADediting_450981 | chr14_74301324_- | SINE | Alu | Name=AluSz |
| ADediting_450982 | chr14_74301342_- | SINE | Alu | Name=AluSz |
| ADediting_450983 | chr14_74301379_- | SINE | Alu | Name=AluSz |
| ADediting_450984 | chr14_74301439_- | SINE | Alu | Name=AluSz |
| ADediting_450985 | chr14_74301685_- | SINE | Alu | Name=AluSq |
| ADediting_450986 | chr14_74301690_- | SINE | Alu | Name=AluSq |
| ADediting_450987 | chr14_74301695_- | SINE | Alu | Name=AluSq |
| ADediting_450988 | chr14_74301702_- | SINE | Alu | Name=AluSq |
| ADediting_450989 | chr14_74301733_- | SINE | Alu | Name=AluSq |
| ADediting_450990 | chr14_74301737_- | SINE | Alu | Name=AluSq |
| ADediting_450991 | chr14_74301753_- | SINE | Alu | Name=AluSq |
| ADediting_450992 | chr14_74301757_- | SINE | Alu | Name=AluSq |
| ADediting_450993 | chr14_74301761_- | SINE | Alu | Name=AluSq |
| ADediting_450994 | chr14_74301777_- | SINE | Alu | Name=AluSq |
| ADediting_450995 | chr14_74301779_- | SINE | Alu | Name=AluSq |
| ADediting_450996 | chr14_74301789_- | SINE | Alu | Name=AluSq |
| ADediting_450997 | chr14_74301818_- | SINE | Alu | Name=AluSq |
| ADediting_450998 | chr14_74301819_- | SINE | Alu | Name=AluSq |
| ADediting_450999 | chr14_74301855_- | SINE | Alu | Name=AluSq |
| ADediting_451000 | chr14_74301861_- | SINE | Alu | Name=AluSq |
| ADediting_451001 | chr14_74301869_- | SINE | Alu | Name=AluSq |
| ADediting_1537824 | chr14_74287459_- | SINE | Alu | Name=AluJr |
| ADediting_1537825 | chr14_74287478_- | SINE | Alu | Name=AluJr |
| ADediting_1537826 | chr14_74288949_- | SINE | Alu | Name=AluSg |
| ADediting_1537827 | chr14_74289050_- | SINE | Alu | Name=AluSg |
| ADediting_1537828 | chr14_74290790_- | SINE | Alu | Name=AluSx1 |
| ADediting_1537829 | chr14_74298478_- | SINE | Alu | Name=AluSp |
| ADediting_1537830 | chr14_74298521_- | SINE | Alu | Name=AluSp |
| ADediting_1537831 | chr14_74298543_- | SINE | Alu | Name=AluSp |
| ADediting_1537832 | chr14_74299853_- | SINE | Alu | Name=AluSq |
| ADediting_1537833 | chr14_74299894_- | SINE | Alu | Name=AluSq |
| ADediting_1537834 | chr14_74299925_- | SINE | Alu | Name=AluSq |
| ADediting_1537835 | chr14_74300017_- | SINE | Alu | Name=AluSq |
| ADediting_1537836 | chr14_74300470_- | SINE | Alu | Name=AluSp |
| ADediting_1537837 | chr14_74300920_- | SINE | Alu | Name=AluSq2 |
| ADediting_1537838 | chr14_74300958_- | SINE | Alu | Name=AluSq2 |
| ADediting_1537839 | chr14_74301021_- | SINE | Alu | Name=AluSq2 |
| ADediting_1537840 | chr14_74301028_- | SINE | Alu | Name=AluSq2 |
| ADediting_1537841 | chr14_74301285_- | SINE | Alu | Name=AluSz |
| ADediting_1537842 | chr14_74301378_- | SINE | Alu | Name=AluSz |
| ADediting_1537843 | chr14_74301406_- | SINE | Alu | Name=AluSz |
| ADediting_1537844 | chr14_74301801_- | SINE | Alu | Name=AluSq |
| ADediting_1537845 | chr14_74301836_- | SINE | Alu | Name=AluSq |
Top |
RNA A-to-I editing events in the alternative splicing sites for ABCD4 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| ES | ADediting_450943 | chr14_74299845_- | 74299838:74299846 | 5ss | 2e | CAGGTGATA | 4.58 | CGGGTGATA | 1.33 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for ABCD4 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |