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	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene

Gene summary for PTPN14

Gene summary

Gene information	Gene symbol	PTPN14
	Gene ID	5784
	Gene name	protein tyrosine phosphatase non-receptor type 14
	Synonyms	CATLPH|PEZ|PTP36
	Cytomap	1q32.3-q41
	Type of gene	protein-coding
	Description	tyrosine-protein phosphatase non-receptor type 14cytoskeletal-associated protein tyrosine phosphataseprotein-tyrosine phosphatase pez
	Modification date	20200313
	UniProtAcc	Q15678,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
PTPN14	GO:0046825	regulation of protein export from nucleus	22948661

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RNA A-to-I events for PTPN14

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_65769(214349313, -), ADediting_65770(214349315, -), ADediting_65771(214349358, -), ADediting_65772(214350544, -), ADediting_65773(214350547, -), ADediting_65774(214350550, -), ADediting_65775(214350552, -), ADediting_65776(214350554, -), ADediting_65777(214350555, -), ADediting_65778(214350556, -), ADediting_65779(214350557, -), ADediting_65780(214350570, -), ADediting_65781(214350576, -), ADediting_65782(214350578, -), ADediting_65783(214350593, -), ADediting_65784(214350665, -), ADediting_65785(214350669, -), ADediting_65786(214350673, -), ADediting_65787(214350678, -), ADediting_65788(214350679, -), ADediting_65789(214350687, -), ADediting_65790(214350689, -), ADediting_65791(214350697, -), ADediting_65792(214350701, -), ADediting_65793(214350705, -), ADediting_65794(214350708, -), ADediting_65795(214350752, -), ADediting_65796(214350753, -), ADediting_65797(214350754, -), ADediting_65798(214350760, -), ADediting_65799(214350762, -), ADediting_65800(214350763, -), ADediting_65801(214350772, -), ADediting_65802(214350777, -), ADediting_65803(214350778, -), ADediting_65804(214350786, -), ADediting_65805(214350791, -), ADediting_65806(214350815, -), ADediting_65807(214350834, -), ADediting_65808(214350835, -), ADediting_65809(214350841, -), ADediting_65810(214350857, -), ADediting_65811(214350975, -), ADediting_65812(214351091, -), ADediting_65813(214351103, -), ADediting_65814(214351104, -), ADediting_65815(214351122, -), ADediting_65816(214351133, -), ADediting_65817(214351140, -), ADediting_65818(214351141, -), ADediting_65819(214351142, -), ADediting_65820(214351151, -), ADediting_65821(214351153, -), ADediting_65822(214351162, -), ADediting_65823(214351177, -), ADediting_65824(214351179, -), ADediting_65825(214351182, -), ADediting_65826(214351188, -), ADediting_65827(214351190, -), ADediting_65828(214351196, -), ADediting_65829(214351197, -), ADediting_65830(214351205, -), ADediting_65831(214351210, -), ADediting_65832(214351213, -), ADediting_65833(214351221, -), ADediting_65834(214351223, -), ADediting_65835(214351226, -), ADediting_65836(214351233, -), ADediting_65837(214351236, -), ADediting_65838(214351237, -), ADediting_65839(214351280, -), ADediting_65840(214351282, -), ADediting_65841(214351290, -), ADediting_65842(214355764, -), ADediting_65843(214355779, -), ADediting_65844(214355793, -), ADediting_65845(214355794, -), ADediting_65846(214355795, -), ADediting_65847(214355796, -), ADediting_65848(214355799, -), ADediting_65849(214355802, -), ADediting_65850(214355803, -), ADediting_65851(214355806, -), ADediting_65852(214355807, -), ADediting_65853(214355808, -), ADediting_65854(214355813, -), ADediting_65855(214355823, -), ADediting_65856(214355824, -), ADediting_65857(214355825, -), ADediting_65858(214355826, -), ADediting_65859(214355827, -), ADediting_65860(214355873, -), ADediting_65861(214355875, -), ADediting_65862(214355891, -), ADediting_65863(214355904, -), ADediting_65864(214355909, -), ADediting_65865(214355910, -), ADediting_65866(214356289, -), ADediting_65867(214356311, -), ADediting_65868(214356316, -), ADediting_65869(214356329, -), ADediting_65870(214356336, -), ADediting_65871(214356337, -), ADediting_65872(214356338, -), ADediting_65873(214356339, -), ADediting_65874(214356348, -), ADediting_65875(214356378, -), ADediting_65876(214356382, -), ADediting_65877(214356397, -), ADediting_65878(214356399, -), ADediting_65879(214356403, -), ADediting_65880(214356409, -), ADediting_65881(214356431, -), ADediting_65882(214368277, -), ADediting_65883(214368309, -), ADediting_65884(214368313, -), ADediting_65885(214368317, -), ADediting_65886(214368339, -), ADediting_65887(214368476, -), ADediting_65888(214368766, -), ADediting_65889(214368786, -), ADediting_65890(214368820, -), ADediting_65891(214368826, -), ADediting_65892(214368839, -), ADediting_65893(214368882, -), ADediting_65894(214368895, -), ADediting_65895(214368899, -), ADediting_65896(214368956, -), ADediting_65897(214387602, -), ADediting_65898(214387637, -), ADediting_65899(214388539, -), ADediting_65900(214388634, -), ADediting_65901(214423905, -), ADediting_65902(214423921, -), ADediting_65903(214423967, -), ADediting_65904(214465389, -), ADediting_65905(214465499, -), ADediting_65906(214465512, -), ADediting_65907(214465538, -), ADediting_65908(214465559, -), ADediting_65909(214465610, -), ADediting_65910(214466068, -), ADediting_65911(214466077, -), ADediting_65912(214466094, -), ADediting_65913(214521456, -), ADediting_65914(214521468, -), ADediting_65915(214521469, -), ADediting_65916(214521510, -), ADediting_65917(214521525, -), ADediting_65918(214521533, -), ADediting_65919(214521547, -), ADediting_65920(214521580, -), ADediting_65921(214521603, -), ADediting_65922(214521615, -), ADediting_65923(214521633, -), ADediting_65924(214522042, -), ADediting_65925(214522048, -), ADediting_65926(214522065, -), ADediting_65927(214522069, -), ADediting_65928(214522074, -), ADediting_65929(214522101, -), ADediting_65930(214522110, -), ADediting_65931(214522116, -), ADediting_65932(214522119, -), ADediting_65933(214522153, -), ADediting_65934(214522154, -), ADediting_65935(214522207, -), ADediting_65936(214522214, -), ADediting_65937(214522224, -), ADediting_65938(214523987, -), ADediting_65939(214523990, -), ADediting_65940(214524122, -), ADediting_65941(214524123, -), ADediting_65942(214524395, -), ADediting_65943(214524417, -), ADediting_65944(214524497, -), ADediting_65945(214524503, -), ADediting_65946(214524504, -), ADediting_65947(214524508, -), ADediting_65948(214524583, -), ADediting_65949(214524590, -), ADediting_65950(214526875, -), ADediting_65951(214526889, -), ADediting_65952(214526907, -), ADediting_65953(214526969, -), ADediting_65954(214526991, -), ADediting_65955(214527008, -), ADediting_65956(214527028, -), ADediting_65957(214527044, -), ADediting_65958(214527052, -), ADediting_65959(214530427, -), ADediting_65960(214530450, -), ADediting_65961(214530513, -), ADediting_65962(214530519, -), ADediting_65963(214530522, -), ADediting_65964(214530535, -), ADediting_65965(214530543, -), ADediting_65966(214530555, -), ADediting_65967(214530602, -), ADediting_1598995(214356091, -), ADediting_1598996(214479157, -),

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RNA editing positional annotations for PTPN14 using Annovar

Protein coding RNA editing(s).

ADeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_65769	chr1_214349313_-	ncRNA_intronic
ADediting_65770	chr1_214349315_-	ncRNA_intronic
ADediting_65771	chr1_214349358_-	ncRNA_intronic
ADediting_65772	chr1_214350544_-	ncRNA_intronic
ADediting_65773	chr1_214350547_-	ncRNA_intronic
ADediting_65774	chr1_214350550_-	ncRNA_intronic
ADediting_65775	chr1_214350552_-	ncRNA_intronic
ADediting_65776	chr1_214350554_-	ncRNA_intronic
ADediting_65777	chr1_214350555_-	ncRNA_intronic
ADediting_65778	chr1_214350556_-	ncRNA_intronic
ADediting_65779	chr1_214350557_-	ncRNA_intronic
ADediting_65780	chr1_214350570_-	ncRNA_intronic
ADediting_65781	chr1_214350576_-	ncRNA_intronic
ADediting_65782	chr1_214350578_-	ncRNA_intronic
ADediting_65783	chr1_214350593_-	ncRNA_intronic
ADediting_65784	chr1_214350665_-	ncRNA_intronic
ADediting_65785	chr1_214350669_-	ncRNA_intronic
ADediting_65786	chr1_214350673_-	ncRNA_intronic
ADediting_65787	chr1_214350678_-	ncRNA_intronic
ADediting_65788	chr1_214350679_-	ncRNA_intronic
ADediting_65789	chr1_214350687_-	ncRNA_intronic
ADediting_65790	chr1_214350689_-	ncRNA_intronic
ADediting_65791	chr1_214350697_-	ncRNA_intronic
ADediting_65792	chr1_214350701_-	ncRNA_intronic
ADediting_65793	chr1_214350705_-	ncRNA_intronic
ADediting_65794	chr1_214350708_-	ncRNA_intronic
ADediting_65795	chr1_214350752_-	ncRNA_intronic
ADediting_65796	chr1_214350753_-	ncRNA_intronic
ADediting_65797	chr1_214350754_-	ncRNA_intronic
ADediting_65798	chr1_214350760_-	ncRNA_intronic
ADediting_65799	chr1_214350762_-	ncRNA_intronic
ADediting_65800	chr1_214350763_-	ncRNA_intronic
ADediting_65801	chr1_214350772_-	ncRNA_intronic
ADediting_65802	chr1_214350777_-	ncRNA_intronic
ADediting_65803	chr1_214350778_-	ncRNA_intronic
ADediting_65804	chr1_214350786_-	ncRNA_intronic
ADediting_65805	chr1_214350791_-	ncRNA_intronic
ADediting_65806	chr1_214350815_-	ncRNA_intronic
ADediting_65807	chr1_214350834_-	ncRNA_intronic
ADediting_65808	chr1_214350835_-	ncRNA_intronic
ADediting_65809	chr1_214350841_-	ncRNA_intronic
ADediting_65810	chr1_214350857_-	ncRNA_intronic
ADediting_65811	chr1_214350975_-	ncRNA_intronic
ADediting_65812	chr1_214351091_-	ncRNA_intronic
ADediting_65813	chr1_214351103_-	ncRNA_intronic
ADediting_65814	chr1_214351104_-	ncRNA_intronic
ADediting_65815	chr1_214351122_-	ncRNA_intronic
ADediting_65816	chr1_214351133_-	ncRNA_intronic
ADediting_65817	chr1_214351140_-	ncRNA_intronic
ADediting_65818	chr1_214351141_-	ncRNA_intronic
ADediting_65819	chr1_214351142_-	ncRNA_intronic
ADediting_65820	chr1_214351151_-	ncRNA_intronic
ADediting_65821	chr1_214351153_-	ncRNA_intronic
ADediting_65822	chr1_214351162_-	ncRNA_intronic
ADediting_65823	chr1_214351177_-	ncRNA_intronic
ADediting_65824	chr1_214351179_-	ncRNA_intronic
ADediting_65825	chr1_214351182_-	ncRNA_intronic
ADediting_65826	chr1_214351188_-	ncRNA_intronic
ADediting_65827	chr1_214351190_-	ncRNA_intronic
ADediting_65828	chr1_214351196_-	ncRNA_intronic
ADediting_65829	chr1_214351197_-	ncRNA_intronic
ADediting_65830	chr1_214351205_-	ncRNA_intronic
ADediting_65831	chr1_214351210_-	ncRNA_intronic
ADediting_65832	chr1_214351213_-	ncRNA_intronic
ADediting_65833	chr1_214351221_-	ncRNA_intronic
ADediting_65834	chr1_214351223_-	ncRNA_intronic
ADediting_65835	chr1_214351226_-	ncRNA_intronic
ADediting_65836	chr1_214351233_-	ncRNA_intronic
ADediting_65837	chr1_214351236_-	ncRNA_intronic
ADediting_65838	chr1_214351237_-	ncRNA_intronic
ADediting_65839	chr1_214351280_-	ncRNA_intronic
ADediting_65840	chr1_214351282_-	ncRNA_intronic
ADediting_65841	chr1_214351290_-	ncRNA_intronic
ADediting_65842	chr1_214355764_-	ncRNA_intronic
ADediting_65843	chr1_214355779_-	ncRNA_intronic
ADediting_65844	chr1_214355793_-	ncRNA_intronic
ADediting_65845	chr1_214355794_-	ncRNA_intronic
ADediting_65846	chr1_214355795_-	ncRNA_intronic
ADediting_65847	chr1_214355796_-	ncRNA_intronic
ADediting_65848	chr1_214355799_-	ncRNA_intronic
ADediting_65849	chr1_214355802_-	ncRNA_intronic
ADediting_65850	chr1_214355803_-	ncRNA_intronic
ADediting_65851	chr1_214355806_-	ncRNA_intronic
ADediting_65852	chr1_214355807_-	ncRNA_intronic
ADediting_65853	chr1_214355808_-	ncRNA_intronic
ADediting_65854	chr1_214355813_-	ncRNA_intronic
ADediting_65855	chr1_214355823_-	ncRNA_intronic
ADediting_65856	chr1_214355824_-	ncRNA_intronic
ADediting_65857	chr1_214355825_-	ncRNA_intronic
ADediting_65858	chr1_214355826_-	ncRNA_intronic
ADediting_65859	chr1_214355827_-	ncRNA_intronic
ADediting_65860	chr1_214355873_-	ncRNA_intronic
ADediting_65861	chr1_214355875_-	ncRNA_intronic
ADediting_65862	chr1_214355891_-	ncRNA_intronic
ADediting_65863	chr1_214355904_-	ncRNA_intronic
ADediting_65864	chr1_214355909_-	ncRNA_intronic
ADediting_65865	chr1_214355910_-	ncRNA_intronic
ADediting_65866	chr1_214356289_-	ncRNA_intronic
ADediting_65867	chr1_214356311_-	ncRNA_intronic
ADediting_65868	chr1_214356316_-	ncRNA_intronic
ADediting_65869	chr1_214356329_-	ncRNA_intronic
ADediting_65870	chr1_214356336_-	ncRNA_intronic
ADediting_65871	chr1_214356337_-	ncRNA_intronic
ADediting_65872	chr1_214356338_-	ncRNA_intronic
ADediting_65873	chr1_214356339_-	ncRNA_intronic
ADediting_65874	chr1_214356348_-	ncRNA_intronic
ADediting_65875	chr1_214356378_-	ncRNA_intronic
ADediting_65876	chr1_214356382_-	ncRNA_intronic
ADediting_65877	chr1_214356397_-	ncRNA_intronic
ADediting_65878	chr1_214356399_-	ncRNA_intronic
ADediting_65879	chr1_214356403_-	ncRNA_intronic
ADediting_65880	chr1_214356409_-	ncRNA_intronic
ADediting_65881	chr1_214356431_-	ncRNA_intronic
ADediting_65882	chr1_214368277_-	intronic
ADediting_65883	chr1_214368309_-	intronic
ADediting_65884	chr1_214368313_-	intronic
ADediting_65885	chr1_214368317_-	intronic
ADediting_65886	chr1_214368339_-	intronic
ADediting_65887	chr1_214368476_-	intronic
ADediting_65888	chr1_214368766_-	intronic
ADediting_65889	chr1_214368786_-	intronic
ADediting_65890	chr1_214368820_-	intronic
ADediting_65891	chr1_214368826_-	intronic
ADediting_65892	chr1_214368839_-	intronic
ADediting_65893	chr1_214368882_-	intronic
ADediting_65894	chr1_214368895_-	intronic
ADediting_65895	chr1_214368899_-	intronic
ADediting_65896	chr1_214368956_-	intronic
ADediting_65897	chr1_214387602_-	intronic
ADediting_65898	chr1_214387637_-	intronic
ADediting_65899	chr1_214388539_-	intronic
ADediting_65900	chr1_214388634_-	intronic
ADediting_65901	chr1_214423905_-	intronic
ADediting_65902	chr1_214423921_-	intronic
ADediting_65903	chr1_214423967_-	intronic
ADediting_65904	chr1_214465389_-	intronic
ADediting_65905	chr1_214465499_-	intronic
ADediting_65906	chr1_214465512_-	intronic
ADediting_65907	chr1_214465538_-	intronic
ADediting_65908	chr1_214465559_-	intronic
ADediting_65909	chr1_214465610_-	intronic
ADediting_65910	chr1_214466068_-	intronic
ADediting_65911	chr1_214466077_-	intronic
ADediting_65912	chr1_214466094_-	intronic
ADediting_65913	chr1_214521456_-	intronic
ADediting_65914	chr1_214521468_-	intronic
ADediting_65915	chr1_214521469_-	intronic
ADediting_65916	chr1_214521510_-	intronic
ADediting_65917	chr1_214521525_-	intronic
ADediting_65918	chr1_214521533_-	intronic
ADediting_65919	chr1_214521547_-	intronic
ADediting_65920	chr1_214521580_-	intronic
ADediting_65921	chr1_214521603_-	intronic
ADediting_65922	chr1_214521615_-	intronic
ADediting_65923	chr1_214521633_-	intronic
ADediting_65924	chr1_214522042_-	intronic
ADediting_65925	chr1_214522048_-	intronic
ADediting_65926	chr1_214522065_-	intronic
ADediting_65927	chr1_214522069_-	intronic
ADediting_65928	chr1_214522074_-	intronic
ADediting_65929	chr1_214522101_-	intronic
ADediting_65930	chr1_214522110_-	intronic
ADediting_65931	chr1_214522116_-	intronic
ADediting_65932	chr1_214522119_-	intronic
ADediting_65933	chr1_214522153_-	intronic
ADediting_65934	chr1_214522154_-	intronic
ADediting_65935	chr1_214522207_-	intronic
ADediting_65936	chr1_214522214_-	intronic
ADediting_65937	chr1_214522224_-	intronic
ADediting_65938	chr1_214523987_-	intronic
ADediting_65939	chr1_214523990_-	intronic
ADediting_65940	chr1_214524122_-	intronic
ADediting_65941	chr1_214524123_-	intronic
ADediting_65942	chr1_214524395_-	intronic
ADediting_65943	chr1_214524417_-	intronic
ADediting_65944	chr1_214524497_-	intronic
ADediting_65945	chr1_214524503_-	intronic
ADediting_65946	chr1_214524504_-	intronic
ADediting_65947	chr1_214524508_-	intronic
ADediting_65948	chr1_214524583_-	intronic
ADediting_65949	chr1_214524590_-	intronic
ADediting_65950	chr1_214526875_-	intronic
ADediting_65951	chr1_214526889_-	intronic
ADediting_65952	chr1_214526907_-	intronic
ADediting_65953	chr1_214526969_-	intronic
ADediting_65954	chr1_214526991_-	intronic
ADediting_65955	chr1_214527008_-	intronic
ADediting_65956	chr1_214527028_-	intronic
ADediting_65957	chr1_214527044_-	intronic
ADediting_65958	chr1_214527052_-	intronic
ADediting_65959	chr1_214530427_-	intronic
ADediting_65960	chr1_214530450_-	intronic
ADediting_65961	chr1_214530513_-	intronic
ADediting_65962	chr1_214530519_-	intronic
ADediting_65963	chr1_214530522_-	intronic
ADediting_65964	chr1_214530535_-	intronic
ADediting_65965	chr1_214530543_-	intronic
ADediting_65966	chr1_214530555_-	intronic
ADediting_65967	chr1_214530602_-	intronic
ADediting_1598995	chr1_214356091_-	ncRNA_intronic
ADediting_1598996	chr1_214479157_-	intronic

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_65772	chr1_214350544_-	SINE	Alu	Name=AluSx
ADediting_65773	chr1_214350547_-	SINE	Alu	Name=AluSx
ADediting_65774	chr1_214350550_-	SINE	Alu	Name=AluSx
ADediting_65775	chr1_214350552_-	SINE	Alu	Name=AluSx
ADediting_65776	chr1_214350554_-	SINE	Alu	Name=AluSx
ADediting_65777	chr1_214350555_-	SINE	Alu	Name=AluSx
ADediting_65778	chr1_214350556_-	SINE	Alu	Name=AluSx
ADediting_65779	chr1_214350557_-	SINE	Alu	Name=AluSx
ADediting_65780	chr1_214350570_-	SINE	Alu	Name=AluSx
ADediting_65781	chr1_214350576_-	SINE	Alu	Name=AluSx
ADediting_65782	chr1_214350578_-	SINE	Alu	Name=AluSx
ADediting_65783	chr1_214350593_-	SINE	Alu	Name=AluSx
ADediting_65784	chr1_214350665_-	SINE	Alu	Name=AluSx
ADediting_65785	chr1_214350669_-	SINE	Alu	Name=AluSx
ADediting_65786	chr1_214350673_-	SINE	Alu	Name=AluSx
ADediting_65787	chr1_214350678_-	SINE	Alu	Name=AluSx
ADediting_65788	chr1_214350679_-	SINE	Alu	Name=AluSx
ADediting_65789	chr1_214350687_-	SINE	Alu	Name=AluSx
ADediting_65790	chr1_214350689_-	SINE	Alu	Name=AluSx
ADediting_65791	chr1_214350697_-	SINE	Alu	Name=AluSx
ADediting_65792	chr1_214350701_-	SINE	Alu	Name=AluSx
ADediting_65793	chr1_214350705_-	SINE	Alu	Name=AluSx
ADediting_65794	chr1_214350708_-	SINE	Alu	Name=AluSx
ADediting_65795	chr1_214350752_-	SINE	Alu	Name=AluSx
ADediting_65796	chr1_214350753_-	SINE	Alu	Name=AluSx
ADediting_65797	chr1_214350754_-	SINE	Alu	Name=AluSx
ADediting_65798	chr1_214350760_-	SINE	Alu	Name=AluSx
ADediting_65799	chr1_214350762_-	SINE	Alu	Name=AluSx
ADediting_65800	chr1_214350763_-	SINE	Alu	Name=AluSx
ADediting_65801	chr1_214350772_-	SINE	Alu	Name=AluSx
ADediting_65802	chr1_214350777_-	SINE	Alu	Name=AluSx
ADediting_65803	chr1_214350778_-	SINE	Alu	Name=AluSx
ADediting_65804	chr1_214350786_-	SINE	Alu	Name=AluSx
ADediting_65805	chr1_214350791_-	SINE	Alu	Name=AluSx
ADediting_65806	chr1_214350815_-	SINE	Alu	Name=AluSx
ADediting_65807	chr1_214350834_-	SINE	Alu	Name=AluSx
ADediting_65808	chr1_214350835_-	SINE	Alu	Name=AluSx
ADediting_65809	chr1_214350841_-	SINE	Alu	Name=AluSx
ADediting_65810	chr1_214350857_-	SINE	Alu	Name=AluSx
ADediting_65812	chr1_214351091_-	SINE	Alu	Name=AluSg
ADediting_65813	chr1_214351103_-	SINE	Alu	Name=AluSg
ADediting_65814	chr1_214351104_-	SINE	Alu	Name=AluSg
ADediting_65815	chr1_214351122_-	SINE	Alu	Name=AluSg
ADediting_65816	chr1_214351133_-	SINE	Alu	Name=AluSg
ADediting_65817	chr1_214351140_-	SINE	Alu	Name=AluSg
ADediting_65818	chr1_214351141_-	SINE	Alu	Name=AluSg
ADediting_65819	chr1_214351142_-	SINE	Alu	Name=AluSg
ADediting_65820	chr1_214351151_-	SINE	Alu	Name=AluSg
ADediting_65821	chr1_214351153_-	SINE	Alu	Name=AluSg
ADediting_65822	chr1_214351162_-	SINE	Alu	Name=AluSg
ADediting_65823	chr1_214351177_-	SINE	Alu	Name=AluSg
ADediting_65824	chr1_214351179_-	SINE	Alu	Name=AluSg
ADediting_65825	chr1_214351182_-	SINE	Alu	Name=AluSg
ADediting_65826	chr1_214351188_-	SINE	Alu	Name=AluSg
ADediting_65827	chr1_214351190_-	SINE	Alu	Name=AluSg
ADediting_65828	chr1_214351196_-	SINE	Alu	Name=AluSg
ADediting_65829	chr1_214351197_-	SINE	Alu	Name=AluSg
ADediting_65830	chr1_214351205_-	SINE	Alu	Name=AluSg
ADediting_65831	chr1_214351210_-	SINE	Alu	Name=AluSg
ADediting_65832	chr1_214351213_-	SINE	Alu	Name=AluSg
ADediting_65833	chr1_214351221_-	SINE	Alu	Name=AluSg
ADediting_65834	chr1_214351223_-	SINE	Alu	Name=AluSg
ADediting_65835	chr1_214351226_-	SINE	Alu	Name=AluSg
ADediting_65836	chr1_214351233_-	SINE	Alu	Name=AluSg
ADediting_65837	chr1_214351236_-	SINE	Alu	Name=AluSg
ADediting_65838	chr1_214351237_-	SINE	Alu	Name=AluSg
ADediting_65839	chr1_214351280_-	SINE	Alu	Name=AluSp
ADediting_65840	chr1_214351282_-	SINE	Alu	Name=AluSp
ADediting_65841	chr1_214351290_-	SINE	Alu	Name=AluSp
ADediting_65882	chr1_214368277_-	SINE	Alu	Name=AluSq2
ADediting_65883	chr1_214368309_-	SINE	Alu	Name=AluSq2
ADediting_65884	chr1_214368313_-	SINE	Alu	Name=AluSq2
ADediting_65885	chr1_214368317_-	SINE	Alu	Name=AluSq2
ADediting_65886	chr1_214368339_-	SINE	Alu	Name=AluSq2
ADediting_65887	chr1_214368476_-	SINE	Alu	Name=AluSq2
ADediting_65888	chr1_214368766_-	SINE	Alu	Name=AluSz
ADediting_65889	chr1_214368786_-	SINE	Alu	Name=AluSz
ADediting_65890	chr1_214368820_-	SINE	Alu	Name=AluSz
ADediting_65891	chr1_214368826_-	SINE	Alu	Name=AluSz
ADediting_65892	chr1_214368839_-	SINE	Alu	Name=AluSz
ADediting_65893	chr1_214368882_-	SINE	Alu	Name=AluSz
ADediting_65894	chr1_214368895_-	SINE	Alu	Name=AluSz
ADediting_65895	chr1_214368899_-	SINE	Alu	Name=AluSz
ADediting_65896	chr1_214368956_-	SINE	Alu	Name=AluSz
ADediting_65897	chr1_214387602_-	SINE	Alu	Name=AluSc
ADediting_65898	chr1_214387637_-	SINE	Alu	Name=AluSc
ADediting_65899	chr1_214388539_-	SINE	Alu	Name=AluSz
ADediting_65900	chr1_214388634_-	SINE	Alu	Name=AluSz
ADediting_65901	chr1_214423905_-	SINE	Alu	Name=AluSz
ADediting_65902	chr1_214423921_-	SINE	Alu	Name=AluSz
ADediting_65903	chr1_214423967_-	SINE	Alu	Name=AluSz
ADediting_65904	chr1_214465389_-	SINE	Alu	Name=AluJb
ADediting_65905	chr1_214465499_-	SINE	Alu	Name=AluJb
ADediting_65906	chr1_214465512_-	SINE	Alu	Name=AluJb
ADediting_65907	chr1_214465538_-	SINE	Alu	Name=AluJb
ADediting_65908	chr1_214465559_-	SINE	Alu	Name=AluJb
ADediting_65909	chr1_214465610_-	SINE	Alu	Name=AluJb
ADediting_65910	chr1_214466068_-	SINE	Alu	Name=AluSx1
ADediting_65911	chr1_214466077_-	SINE	Alu	Name=AluSx1
ADediting_65912	chr1_214466094_-	SINE	Alu	Name=AluSx1
ADediting_65913	chr1_214521456_-	SINE	Alu	Name=AluSq
ADediting_65914	chr1_214521468_-	SINE	Alu	Name=AluSq
ADediting_65915	chr1_214521469_-	SINE	Alu	Name=AluSq
ADediting_65916	chr1_214521510_-	SINE	Alu	Name=AluSq
ADediting_65917	chr1_214521525_-	SINE	Alu	Name=AluSq
ADediting_65918	chr1_214521533_-	SINE	Alu	Name=AluSq
ADediting_65919	chr1_214521547_-	SINE	Alu	Name=AluSq
ADediting_65920	chr1_214521580_-	SINE	Alu	Name=AluSq
ADediting_65921	chr1_214521603_-	SINE	Alu	Name=AluSq
ADediting_65922	chr1_214521615_-	SINE	Alu	Name=AluSq
ADediting_65923	chr1_214521633_-	SINE	Alu	Name=AluSq
ADediting_65924	chr1_214522042_-	SINE	Alu	Name=AluSz
ADediting_65925	chr1_214522048_-	SINE	Alu	Name=AluSz
ADediting_65926	chr1_214522065_-	SINE	Alu	Name=AluSz
ADediting_65927	chr1_214522069_-	SINE	Alu	Name=AluSz
ADediting_65928	chr1_214522074_-	SINE	Alu	Name=AluSz
ADediting_65929	chr1_214522101_-	SINE	Alu	Name=AluSz
ADediting_65930	chr1_214522110_-	SINE	Alu	Name=AluSz
ADediting_65931	chr1_214522116_-	SINE	Alu	Name=AluSz
ADediting_65932	chr1_214522119_-	SINE	Alu	Name=AluSz
ADediting_65933	chr1_214522153_-	SINE	Alu	Name=AluSz
ADediting_65934	chr1_214522154_-	SINE	Alu	Name=AluSz
ADediting_65935	chr1_214522207_-	SINE	Alu	Name=AluSz
ADediting_65936	chr1_214522214_-	SINE	Alu	Name=AluSz
ADediting_65937	chr1_214522224_-	SINE	Alu	Name=AluSz
ADediting_65938	chr1_214523987_-	SINE	Alu	Name=AluSx
ADediting_65939	chr1_214523990_-	SINE	Alu	Name=AluSx
ADediting_65940	chr1_214524122_-	SINE	Alu	Name=AluSx
ADediting_65941	chr1_214524123_-	SINE	Alu	Name=AluSx
ADediting_65942	chr1_214524395_-	SINE	Alu	Name=AluJo
ADediting_65943	chr1_214524417_-	SINE	Alu	Name=AluJo
ADediting_65944	chr1_214524497_-	SINE	Alu	Name=AluJo
ADediting_65945	chr1_214524503_-	SINE	Alu	Name=AluJo
ADediting_65946	chr1_214524504_-	SINE	Alu	Name=AluJo
ADediting_65947	chr1_214524508_-	SINE	Alu	Name=AluJo
ADediting_65948	chr1_214524583_-	SINE	Alu	Name=AluJo
ADediting_65949	chr1_214524590_-	SINE	Alu	Name=AluJo
ADediting_65950	chr1_214526875_-	SINE	Alu	Name=AluSp
ADediting_65951	chr1_214526889_-	SINE	Alu	Name=AluSp
ADediting_65952	chr1_214526907_-	SINE	Alu	Name=AluSp
ADediting_65953	chr1_214526969_-	SINE	Alu	Name=AluSp
ADediting_65954	chr1_214526991_-	SINE	Alu	Name=AluSp
ADediting_65955	chr1_214527008_-	SINE	Alu	Name=AluSp
ADediting_65956	chr1_214527028_-	SINE	Alu	Name=AluSp
ADediting_65957	chr1_214527044_-	SINE	Alu	Name=AluSp
ADediting_65958	chr1_214527052_-	SINE	Alu	Name=AluSp
ADediting_65959	chr1_214530427_-	SINE	Alu	Name=AluJb
ADediting_65960	chr1_214530450_-	SINE	Alu	Name=AluJb
ADediting_65961	chr1_214530513_-	SINE	Alu	Name=AluJb
ADediting_65962	chr1_214530519_-	SINE	Alu	Name=AluJb
ADediting_65963	chr1_214530522_-	SINE	Alu	Name=AluJb
ADediting_65964	chr1_214530535_-	SINE	Alu	Name=AluJb
ADediting_65965	chr1_214530543_-	SINE	Alu	Name=AluJb
ADediting_65966	chr1_214530555_-	SINE	Alu	Name=AluJb
ADediting_65967	chr1_214530602_-	SINE	Alu	Name=AluJb
ADediting_1598995	chr1_214356091_-	SINE	Alu	Name=AluJb
ADediting_1598996	chr1_214479157_-	SINE	Alu	Name=AluJo

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RNA A-to-I editing events in the alternative splicing sites for PTPN14

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PTPN14

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

Top

Protein coding region RNA A-to-I editings for PTPN14

- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PTPN14

RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_65769	chr1_214349313_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3187-3p	chr1	214349309	214349315	7mer-m8	214349308	214349328	141	-18.33
ADediting_65769	chr1_214349313_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3190-5p	chr1	214349307	214349314	8mer-1a	214349307	214349325	156	-25.7
ADediting_65769	chr1_214349313_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4529-5p	chr1	214349309	214349316	8mer-1a	214349309	214349329	162	-25.78
ADediting_65769	chr1_214349313_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6884-3p	chr1	214349312	214349318	7mer-m8	214349311	214349335	157	-20.35
ADediting_65770	chr1_214349315_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-140-3p	chr1	214349313	214349320	8mer-1a	214349313	214349333	140	-15.67
ADediting_65771	chr1_214349358_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-2115-5p	chr1	214349353	214349359	7mer-m8	214349352	214349371	157	-24.08
ADediting_65778	chr1_214350556_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-526b-5p	chr1	214350554	214350561	8mer-1a	214350554	214350576	161	-17.55
ADediting_65779	chr1_214350557_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4329	chr1	214350556	214350563	8mer-1a	214350556	214350573	143	-16.64
ADediting_65780	chr1_214350570_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3156-3p	chr1	214350568	214350574	7mer-m8	214350567	214350587	141	-17.24
ADediting_65780	chr1_214350570_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4433a-5p	chr1	214350567	214350573	7mer-m8	214350566	214350586	142	-16.12
ADediting_65780	chr1_214350570_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-5588-3p	chr1	214350566	214350572	7mer-m8	214350565	214350585	151	-24.55
ADediting_65780	chr1_214350570_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6777-3p	chr1	214350570	214350576	7mer-m8	214350569	214350588	151	-23.19
ADediting_65782	chr1_214350578_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6071	chr1	214350574	214350580	7mer-m8	214350573	214350593	152	-24.03
ADediting_65782	chr1_214350578_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6728-3p	chr1	214350573	214350579	7mer-m8	214350572	214350590	143	-20.31
ADediting_65785	chr1_214350669_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1207-3p	chr1	214350669	214350675	7mer-m8	214350668	214350685	140	-12.56
ADediting_65785	chr1_214350669_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-646	chr1	214350667	214350673	7mer-m8	214350666	214350684	145	-14.99
ADediting_65787	chr1_214350678_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-8052	chr1	214350673	214350679	7mer-1a	214350673	214350691	143	-23.77
ADediting_65788	chr1_214350679_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-513a-5p	chr1	214350678	214350684	7mer-m8	214350677	214350694	160	-21.48
ADediting_65788	chr1_214350679_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-638	chr1	214350673	214350679	7mer-1a	214350673	214350697	163	-35.62
ADediting_65789	chr1_214350687_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3622a-5p	chr1	214350682	214350688	7mer-m8	214350681	214350702	147	-21.88
ADediting_65789	chr1_214350687_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6767-3p	chr1	214350685	214350691	7mer-m8	214350684	214350705	151	-15.91
ADediting_65790	chr1_214350689_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4787-3p	chr1	214350686	214350692	7mer-m8	214350685	214350706	162	-26.73
ADediting_65793	chr1_214350705_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3190-5p	chr1	214350700	214350706	7mer-m8	214350699	214350718	143	-16.24
ADediting_65793	chr1_214350705_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548s	chr1	214350701	214350707	7mer-m8	214350700	214350722	141	-10.54
ADediting_65795	chr1_214350752_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-365a-5p	chr1	214350748	214350754	7mer-m8	214350747	214350769	141	-18.93
ADediting_65795	chr1_214350752_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-365b-5p	chr1	214350748	214350754	7mer-m8	214350747	214350774	144	-24.67
ADediting_65795	chr1_214350752_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-412-3p	chr1	214350752	214350758	7mer-m8	214350751	214350773	153	-18.74
ADediting_65795	chr1_214350752_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6754-3p	chr1	214350752	214350758	7mer-m8	214350751	214350771	144	-16.37
ADediting_65796	chr1_214350753_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1229-3p	chr1	214350752	214350758	7mer-m8	214350751	214350775	146	-15.97
ADediting_65796	chr1_214350753_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4695-3p	chr1	214350750	214350756	7mer-m8	214350749	214350769	152	-19.56
ADediting_65796	chr1_214350753_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6511a-3p	chr1	214350752	214350759	8mer-1a	214350752	214350773	145	-15.78
ADediting_65796	chr1_214350753_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6511b-3p	chr1	214350752	214350759	8mer-1a	214350752	214350774	140	-14.97
ADediting_65798	chr1_214350760_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1306-3p	chr1	214350760	214350766	7mer-m8	214350759	214350776	152	-23.71
ADediting_65799	chr1_214350762_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3190-5p	chr1	214350762	214350768	7mer-m8	214350761	214350780	152	-19.64
ADediting_65805	chr1_214350791_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4726-3p	chr1	214350790	214350796	7mer-m8	214350789	214350811	150	-23.19
ADediting_65806	chr1_214350815_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3943	chr1	214350811	214350817	7mer-m8	214350810	214350833	142	-23.26
ADediting_65808	chr1_214350835_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-513a-5p	chr1	214350834	214350840	7mer-m8	214350833	214350850	144	-17.77
ADediting_65813	chr1_214351103_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3189-3p	chr1	214351102	214351108	7mer-m8	214351101	214351123	157	-27.12
ADediting_65813	chr1_214351103_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6813-3p	chr1	214351101	214351107	7mer-m8	214351100	214351120	140	-11.13
ADediting_65814	chr1_214351104_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3192-5p	chr1	214351103	214351110	8mer-1a	214351103	214351124	154	-27.94
ADediting_65814	chr1_214351104_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-326	chr1	214351102	214351108	7mer-m8	214351101	214351120	140	-13.37
ADediting_65814	chr1_214351104_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-330-5p	chr1	214351102	214351108	7mer-m8	214351101	214351122	140	-19.33
ADediting_65814	chr1_214351104_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4314	chr1	214351103	214351109	7mer-m8	214351102	214351119	140	-20.83
ADediting_65814	chr1_214351104_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-514a-5p	chr1	214351101	214351107	7mer-m8	214351100	214351123	146	-18.62
ADediting_65815	chr1_214351122_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4529-5p	chr1	214351120	214351126	7mer-m8	214351119	214351140	153	-17.19
ADediting_65815	chr1_214351122_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6508-3p	chr1	214351119	214351125	7mer-m8	214351118	214351140	143	-15.84
ADediting_65815	chr1_214351122_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6762-5p	chr1	214351118	214351124	7mer-m8	214351117	214351139	148	-20.79
ADediting_65815	chr1_214351122_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6845-5p	chr1	214351118	214351124	7mer-m8	214351117	214351134	146	-21.68
ADediting_65815	chr1_214351122_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6884-3p	chr1	214351122	214351128	7mer-m8	214351121	214351143	140	-10.73
ADediting_65817	chr1_214351140_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3188	chr1	214351136	214351142	7mer-m8	214351135	214351157	145	-18.01
ADediting_65818	chr1_214351141_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4329	chr1	214351140	214351147	8mer-1a	214351140	214351156	148	-15.55
ADediting_65820	chr1_214351151_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6849-3p	chr1	214351147	214351153	7mer-m8	214351146	214351166	156	-22.23
ADediting_65822	chr1_214351162_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4445-3p	chr1	214351161	214351167	7mer-m8	214351160	214351180	150	-18.34
ADediting_65822	chr1_214351162_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548al	chr1	214351161	214351167	7mer-m8	214351160	214351183	151	-16.69
ADediting_65826	chr1_214351188_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4803	chr1	214351186	214351192	7mer-m8	214351185	214351204	150	-9.77
ADediting_65828	chr1_214351196_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548ae-3p	chr1	214351190	214351197	8mer-1a	214351190	214351210	141	-6.14
ADediting_65828	chr1_214351196_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548ah-3p	chr1	214351190	214351197	8mer-1a	214351190	214351212	143	-6.78
ADediting_65828	chr1_214351196_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548aj-3p	chr1	214351190	214351197	8mer-1a	214351190	214351210	141	-8.64
ADediting_65828	chr1_214351196_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548am-3p	chr1	214351190	214351197	8mer-1a	214351190	214351212	143	-6.14
ADediting_65828	chr1_214351196_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548aq-3p	chr1	214351190	214351197	8mer-1a	214351190	214351211	141	-6.21
ADediting_65828	chr1_214351196_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548j-3p	chr1	214351190	214351197	8mer-1a	214351190	214351210	141	-6.14
ADediting_65828	chr1_214351196_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548x-3p	chr1	214351190	214351197	8mer-1a	214351190	214351209	141	-8.64
ADediting_65828	chr1_214351196_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-7844-5p	chr1	214351193	214351199	7mer-m8	214351192	214351213	168	-22.99
ADediting_65829	chr1_214351197_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-34a-3p	chr1	214351194	214351200	7mer-m8	214351193	214351215	141	-8.35
ADediting_65830	chr1_214351205_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1268a	chr1	214351202	214351208	7mer-m8	214351201	214351218	170	-35.96
ADediting_65830	chr1_214351205_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1268b	chr1	214351202	214351208	7mer-m8	214351201	214351220	170	-38.03
ADediting_65831	chr1_214351210_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4746-3p	chr1	214351209	214351215	7mer-m8	214351208	214351230	146	-22.59
ADediting_65832	chr1_214351213_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6722-5p	chr1	214351210	214351217	8mer-1a	214351210	214351230	143	-18.7
ADediting_65836	chr1_214351233_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4691-3p	chr1	214351229	214351235	7mer-m8	214351228	214351249	143	-25.78
ADediting_65837	chr1_214351236_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-432-5p	chr1	214351236	214351242	7mer-m8	214351235	214351256	143	-16.96
ADediting_65837	chr1_214351236_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6813-3p	chr1	214351233	214351240	8mer-1a	214351233	214351254	146	-17.55
ADediting_65838	chr1_214351237_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-514a-5p	chr1	214351233	214351240	8mer-1a	214351233	214351254	162	-22.57
ADediting_65838	chr1_214351237_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-516b-5p	chr1	214351236	214351242	7mer-m8	214351235	214351252	147	-22.02
ADediting_65838	chr1_214351237_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-518c-5p	chr1	214351235	214351241	7mer-m8	214351234	214351255	162	-27.51
ADediting_65840	chr1_214351282_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4733-5p	chr1	214351279	214351285	7mer-m8	214351278	214351300	150	-13.5
ADediting_65841	chr1_214351290_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3613-3p	chr1	214351290	214351296	7mer-m8	214351289	214351312	162	-8.51
ADediting_65841	chr1_214351290_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548aa	chr1	214351285	214351291	7mer-m8	214351284	214351308	147	-6.79
ADediting_65841	chr1_214351290_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548ap-3p	chr1	214351285	214351291	7mer-m8	214351284	214351302	147	-6.79
ADediting_65841	chr1_214351290_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548t-3p	chr1	214351285	214351291	7mer-m8	214351284	214351308	147	-6.79
ADediting_65843	chr1_214355779_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3064-3p	chr1	214355777	214355783	7mer-m8	214355776	214355798	152	-13.73
ADediting_65844	chr1_214355793_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-627-3p	chr1	214355793	214355799	7mer-m8	214355792	214355813	147	-10.33
ADediting_65845	chr1_214355794_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-130b-5p	chr1	214355792	214355798	7mer-m8	214355791	214355810	145	-14.12
ADediting_65846	chr1_214355795_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3682-5p	chr1	214355790	214355796	7mer-m8	214355789	214355809	150	-11.72
ADediting_65846	chr1_214355795_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4659a-3p	chr1	214355793	214355799	7mer-m8	214355792	214355815	144	-10.4
ADediting_65846	chr1_214355795_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4659b-3p	chr1	214355793	214355799	7mer-m8	214355792	214355815	144	-10.4
ADediting_65846	chr1_214355795_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4778-3p	chr1	214355792	214355798	7mer-m8	214355791	214355810	145	-11.64
ADediting_65847	chr1_214355796_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3191-5p	chr1	214355794	214355801	8mer-1a	214355794	214355815	140	-11.89
ADediting_65847	chr1_214355796_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6764-3p	chr1	214355795	214355802	8mer-1a	214355795	214355813	143	-14.86
ADediting_65847	chr1_214355796_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6824-3p	chr1	214355795	214355802	8mer-1a	214355795	214355815	140	-13.85
ADediting_65848	chr1_214355799_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4664-3p	chr1	214355795	214355802	8mer-1a	214355795	214355818	141	-13.83
ADediting_65849	chr1_214355802_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-29a-5p	chr1	214355802	214355808	7mer-m8	214355801	214355821	142	-12.48
ADediting_65849	chr1_214355802_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3064-5p	chr1	214355797	214355804	8mer-1a	214355797	214355817	165	-24.99
ADediting_65849	chr1_214355802_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3085-3p	chr1	214355797	214355804	8mer-1a	214355797	214355817	150	-16.47
ADediting_65849	chr1_214355802_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6504-5p	chr1	214355797	214355804	8mer-1a	214355797	214355820	150	-17.99
ADediting_65855	chr1_214355823_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-501-5p	chr1	214355820	214355826	7mer-m8	214355819	214355842	155	-15.95
ADediting_65856	chr1_214355824_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4753-3p	chr1	214355821	214355827	7mer-m8	214355820	214355841	143	-13.09
ADediting_65861	chr1_214355875_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-188-3p	chr1	214355873	214355879	7mer-m8	214355872	214355891	151	-23.5
ADediting_65861	chr1_214355875_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-532-3p	chr1	214355872	214355878	7mer-m8	214355871	214355895	149	-16.66
ADediting_65863	chr1_214355904_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548ay-3p	chr1	214355899	214355905	7mer-m8	214355898	214355919	167	-16.18
ADediting_65866	chr1_214356289_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-10397-5p	chr1	214356287	214356293	7mer-1a	214356287	214356309	143	-28.33
ADediting_65868	chr1_214356316_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6880-3p	chr1	214356316	214356322	7mer-m8	214356315	214356336	158	-25.22
ADediting_65870	chr1_214356336_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1249-3p	chr1	214356332	214356338	7mer-m8	214356331	214356352	149	-18.68
ADediting_65870	chr1_214356336_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6832-3p	chr1	214356334	214356340	7mer-m8	214356333	214356352	147	-14.59
ADediting_65871	chr1_214356337_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-130b-5p	chr1	214356335	214356341	7mer-m8	214356334	214356355	156	-20.39
ADediting_65871	chr1_214356337_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-2682-3p	chr1	214356333	214356339	7mer-m8	214356332	214356355	147	-22.31
ADediting_65871	chr1_214356337_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6781-3p	chr1	214356333	214356339	7mer-m8	214356332	214356353	163	-25.55
ADediting_65872	chr1_214356338_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1248	chr1	214356334	214356340	7mer-m8	214356333	214356358	150	-15.95
ADediting_65872	chr1_214356338_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4778-3p	chr1	214356335	214356341	7mer-m8	214356334	214356355	158	-21.62
ADediting_65872	chr1_214356338_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6875-3p	chr1	214356336	214356342	7mer-m8	214356335	214356356	152	-13.78
ADediting_65873	chr1_214356339_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-150-5p	chr1	214356338	214356345	8mer-1a	214356338	214356359	142	-14.54
ADediting_65873	chr1_214356339_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4713-5p	chr1	214356337	214356344	8mer-1a	214356337	214356361	143	-15.82
ADediting_65873	chr1_214356339_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-629-3p	chr1	214356336	214356343	8mer-1a	214356336	214356359	154	-16.47
ADediting_65875	chr1_214356378_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-551b-5p	chr1	214356374	214356380	7mer-m8	214356373	214356393	149	-11.56
ADediting_65876	chr1_214356382_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-9902	chr1	214356381	214356387	7mer-m8	214356380	214356399	152	-20.13
ADediting_65879	chr1_214356403_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-2116-3p	chr1	214356403	214356409	7mer-m8	214356402	214356424	155	-23.53
ADediting_65879	chr1_214356403_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6821-3p	chr1	214356399	214356405	7mer-1a	214356399	214356419	141	-23.6
ADediting_65880	chr1_214356409_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1260a	chr1	214356403	214356410	8mer-1a	214356403	214356420	149	-18.57
ADediting_65880	chr1_214356409_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1260b	chr1	214356403	214356410	8mer-1a	214356403	214356421	157	-20.22

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1598995	chr1_214356091_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1207-3p	chr1	214356087	214356093	7mer-m8	214356086	214356103	144	-13.35
ADediting_65769	chr1_214349313_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3085-3p	chr1	214349307	214349313	7mer-1a	214349307	214349327	151	-29.18
ADediting_65769	chr1_214349313_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-664a-5p	chr1	214349307	214349314	8mer-1a	214349307	214349330	140	-11.14
ADediting_65771	chr1_214349358_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-7159-3p	chr1	214349355	214349361	7mer-m8	214349354	214349370	141	-13.41
ADediting_65780	chr1_214350570_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6794-3p	chr1	214350570	214350576	7mer-m8	214350569	214350588	143	-18.56
ADediting_65781	chr1_214350576_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3664-5p	chr1	214350572	214350578	7mer-m8	214350571	214350593	143	-15.23
ADediting_65781	chr1_214350576_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-367-5p	chr1	214350574	214350581	8mer-1a	214350574	214350595	143	-12.17
ADediting_65781	chr1_214350576_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-744-3p	chr1	214350576	214350582	7mer-m8	214350575	214350596	140	-14.79
ADediting_65782	chr1_214350578_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-367-5p	chr1	214350574	214350581	8mer-1a	214350574	214350595	143	-12.17
ADediting_65782	chr1_214350578_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-744-3p	chr1	214350576	214350582	7mer-m8	214350575	214350596	140	-14.79
ADediting_65784	chr1_214350665_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1200	chr1	214350662	214350668	7mer-m8	214350661	214350682	141	-17.86
ADediting_65784	chr1_214350665_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6869-5p	chr1	214350665	214350671	7mer-m8	214350664	214350686	146	-19.73
ADediting_65785	chr1_214350669_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6869-5p	chr1	214350665	214350671	7mer-m8	214350664	214350686	146	-19.73
ADediting_65786	chr1_214350673_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-5089-5p	chr1	214350673	214350679	7mer-m8	214350672	214350691	146	-12.33
ADediting_65786	chr1_214350673_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6506-5p	chr1	214350672	214350678	7mer-m8	214350671	214350692	151	-16.08
ADediting_65787	chr1_214350678_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-10399-5p	chr1	214350677	214350683	7mer-m8	214350676	214350697	152	-11.75
ADediting_65787	chr1_214350678_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-5089-5p	chr1	214350673	214350679	7mer-m8	214350672	214350691	146	-12.33
ADediting_65787	chr1_214350678_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6504-3p	chr1	214350677	214350683	7mer-m8	214350676	214350697	148	-14.2
ADediting_65788	chr1_214350679_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-10399-5p	chr1	214350677	214350683	7mer-m8	214350676	214350697	152	-11.75
ADediting_65788	chr1_214350679_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6504-3p	chr1	214350677	214350683	7mer-m8	214350676	214350697	148	-14.2
ADediting_65788	chr1_214350679_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-7151-3p	chr1	214350678	214350685	8mer-1a	214350678	214350694	142	-13.26
ADediting_65789	chr1_214350687_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-455-5p	chr1	214350686	214350692	7mer-m8	214350685	214350707	143	-17.03
ADediting_65790	chr1_214350689_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1227-3p	chr1	214350687	214350694	8mer-1a	214350687	214350706	147	-16
ADediting_65790	chr1_214350689_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-455-5p	chr1	214350686	214350692	7mer-m8	214350685	214350707	143	-17.03
ADediting_65790	chr1_214350689_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4715-3p	chr1	214350689	214350695	7mer-m8	214350688	214350710	151	-21.25
ADediting_65791	chr1_214350697_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6872-3p	chr1	214350694	214350700	7mer-m8	214350693	214350713	145	-14.21
ADediting_65792	chr1_214350701_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4794	chr1	214350700	214350706	7mer-m8	214350699	214350720	140	-12.23
ADediting_65792	chr1_214350701_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-664a-5p	chr1	214350700	214350706	7mer-m8	214350699	214350722	141	-12.64
ADediting_65793	chr1_214350705_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4735-5p	chr1	214350704	214350710	7mer-m8	214350703	214350724	140	-4.28
ADediting_65793	chr1_214350705_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4794	chr1	214350700	214350706	7mer-m8	214350699	214350720	140	-12.23
ADediting_65793	chr1_214350705_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-664a-5p	chr1	214350700	214350706	7mer-m8	214350699	214350722	141	-12.64
ADediting_65794	chr1_214350708_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4735-5p	chr1	214350704	214350710	7mer-m8	214350703	214350724	140	-4.28
ADediting_65795	chr1_214350752_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3167	chr1	214350749	214350755	7mer-m8	214350748	214350768	150	-14.75
ADediting_65795	chr1_214350752_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-876-5p	chr1	214350749	214350755	7mer-m8	214350748	214350769	150	-12.31
ADediting_65796	chr1_214350753_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3167	chr1	214350749	214350755	7mer-m8	214350748	214350768	150	-14.75
ADediting_65796	chr1_214350753_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-876-5p	chr1	214350749	214350755	7mer-m8	214350748	214350769	150	-12.31
ADediting_65797	chr1_214350754_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3167	chr1	214350749	214350755	7mer-m8	214350748	214350768	150	-14.75
ADediting_65797	chr1_214350754_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-876-5p	chr1	214350749	214350755	7mer-m8	214350748	214350769	150	-12.31
ADediting_65798	chr1_214350760_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4716-5p	chr1	214350757	214350763	7mer-m8	214350756	214350777	140	-11.3
ADediting_65798	chr1_214350760_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4781-3p	chr1	214350759	214350765	7mer-m8	214350758	214350776	144	-13.86
ADediting_65799	chr1_214350762_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4716-5p	chr1	214350757	214350763	7mer-m8	214350756	214350777	140	-11.3
ADediting_65799	chr1_214350762_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4781-3p	chr1	214350759	214350765	7mer-m8	214350758	214350776	144	-13.86
ADediting_65800	chr1_214350763_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4435	chr1	214350762	214350769	8mer-1a	214350762	214350782	146	-17.76
ADediting_65800	chr1_214350763_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4781-3p	chr1	214350759	214350765	7mer-m8	214350758	214350776	144	-13.86
ADediting_65801	chr1_214350772_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3663-5p	chr1	214350771	214350777	7mer-m8	214350770	214350792	141	-22.12
ADediting_65801	chr1_214350772_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6131	chr1	214350770	214350776	7mer-m8	214350769	214350787	140	-20.44
ADediting_65804	chr1_214350786_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6078	chr1	214350782	214350788	7mer-m8	214350781	214350800	155	-20.61
ADediting_65806	chr1_214350815_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-150-5p	chr1	214350814	214350820	7mer-m8	214350813	214350834	140	-15.8
ADediting_65806	chr1_214350815_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6778-3p	chr1	214350812	214350818	7mer-m8	214350811	214350831	143	-14.47
ADediting_65807	chr1_214350834_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-10399-5p	chr1	214350833	214350839	7mer-m8	214350832	214350853	148	-10
ADediting_65807	chr1_214350834_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6504-3p	chr1	214350833	214350839	7mer-m8	214350832	214350853	145	-14.48
ADediting_65808	chr1_214350835_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-10399-5p	chr1	214350833	214350839	7mer-m8	214350832	214350853	148	-10
ADediting_65808	chr1_214350835_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6504-3p	chr1	214350833	214350839	7mer-m8	214350832	214350853	145	-14.48
ADediting_65809	chr1_214350841_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3934-5p	chr1	214350837	214350843	7mer-m8	214350836	214350858	147	-18.77
ADediting_65809	chr1_214350841_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-552-3p	chr1	214350835	214350842	8mer-1a	214350835	214350855	140	-14.51
ADediting_65810	chr1_214350857_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3126-3p	chr1	214350854	214350860	7mer-m8	214350853	214350875	153	-21.05
ADediting_65810	chr1_214350857_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3187-3p	chr1	214350857	214350863	7mer-m8	214350856	214350875	143	-18.72
ADediting_65810	chr1_214350857_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3190-5p	chr1	214350855	214350862	8mer-1a	214350855	214350877	147	-19.81
ADediting_65811	chr1_214350975_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3159	chr1	214350970	214350976	7mer-m8	214350969	214350990	140	-8.1
ADediting_65812	chr1_214351091_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6772-5p	chr1	214351085	214351092	8mer-1a	214351085	214351107	149	-23.86
ADediting_65814	chr1_214351104_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-887-5p	chr1	214351103	214351110	8mer-1a	214351103	214351123	147	-13.82
ADediting_65816	chr1_214351133_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6801-5p	chr1	214351131	214351137	7mer-m8	214351130	214351152	150	-20.12
ADediting_65817	chr1_214351140_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-12127	chr1	214351135	214351141	7mer-m8	214351134	214351155	147	-19.61
ADediting_65817	chr1_214351140_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4464	chr1	214351137	214351143	7mer-m8	214351136	214351158	143	-13.8
ADediting_65817	chr1_214351140_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4748	chr1	214351137	214351143	7mer-m8	214351136	214351156	155	-21.58
ADediting_65818	chr1_214351141_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4464	chr1	214351137	214351143	7mer-m8	214351136	214351158	143	-13.8
ADediting_65818	chr1_214351141_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4748	chr1	214351137	214351143	7mer-m8	214351136	214351156	155	-21.58
ADediting_65819	chr1_214351142_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4464	chr1	214351137	214351143	7mer-m8	214351136	214351158	143	-13.8
ADediting_65819	chr1_214351142_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4748	chr1	214351137	214351143	7mer-m8	214351136	214351156	155	-21.58
ADediting_65820	chr1_214351151_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-622	chr1	214351148	214351154	7mer-m8	214351147	214351167	150	-17
ADediting_65821	chr1_214351153_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3190-5p	chr1	214351151	214351158	8mer-1a	214351151	214351170	146	-18.26
ADediting_65821	chr1_214351153_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-548s	chr1	214351153	214351159	7mer-m8	214351152	214351174	152	-15.87
ADediting_65821	chr1_214351153_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-622	chr1	214351148	214351154	7mer-m8	214351147	214351167	150	-17
ADediting_65822	chr1_214351162_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-942-3p	chr1	214351159	214351165	7mer-m8	214351158	214351178	152	-15.18
ADediting_65823	chr1_214351177_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-340-3p	chr1	214351172	214351178	7mer-m8	214351171	214351193	151	-17.97
ADediting_65823	chr1_214351177_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4684-5p	chr1	214351175	214351181	7mer-m8	214351174	214351195	151	-12.03
ADediting_65823	chr1_214351177_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6827-3p	chr1	214351172	214351178	7mer-m8	214351171	214351191	153	-17.53
ADediting_65824	chr1_214351179_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4684-5p	chr1	214351175	214351181	7mer-m8	214351174	214351195	151	-12.03
ADediting_65830	chr1_214351205_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4455	chr1	214351202	214351208	7mer-m8	214351201	214351216	148	-16.9
ADediting_65835	chr1_214351226_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-7977	chr1	214351226	214351232	7mer-m8	214351225	214351242	142	-12.93
ADediting_65836	chr1_214351233_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-5690	chr1	214351229	214351235	7mer-m8	214351228	214351248	145	-16.74
ADediting_65839	chr1_214351280_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4695-3p	chr1	214351278	214351284	7mer-m8	214351277	214351298	140	-12.86
ADediting_65840	chr1_214351282_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-371b-5p	chr1	214351280	214351287	8mer-1a	214351280	214351301	146	-8.01
ADediting_65840	chr1_214351282_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-373-5p	chr1	214351280	214351287	8mer-1a	214351280	214351301	140	-8.35
ADediting_65840	chr1_214351282_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4695-3p	chr1	214351278	214351284	7mer-m8	214351277	214351298	140	-12.86
ADediting_65840	chr1_214351282_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-616-5p	chr1	214351280	214351287	8mer-1a	214351280	214351301	142	-6.21
ADediting_65844	chr1_214355793_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1-5p	chr1	214355788	214355794	7mer-m8	214355787	214355808	148	-7.83
ADediting_65854	chr1_214355813_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-668-3p	chr1	214355811	214355818	8mer-1a	214355811	214355837	142	-19.05
ADediting_65860	chr1_214355873_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-12125	chr1	214355872	214355878	7mer-m8	214355871	214355890	143	-16.76
ADediting_65861	chr1_214355875_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-12125	chr1	214355872	214355878	7mer-m8	214355871	214355890	143	-16.76
ADediting_65862	chr1_214355891_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4263	chr1	214355888	214355894	7mer-m8	214355887	214355904	140	-9.21
ADediting_65868	chr1_214356316_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-532-5p	chr1	214356315	214356321	7mer-m8	214356314	214356335	140	-17.7
ADediting_65869	chr1_214356329_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-324-3p	chr1	214356324	214356331	8mer-1a	214356324	214356346	147	-19.65
ADediting_65869	chr1_214356329_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6509-3p	chr1	214356324	214356330	7mer-m8	214356323	214356348	154	-23.3
ADediting_65869	chr1_214356329_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6890-3p	chr1	214356326	214356332	7mer-m8	214356325	214356347	144	-22.72
ADediting_65876	chr1_214356382_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6508-5p	chr1	214356381	214356387	7mer-m8	214356380	214356401	151	-17.54
ADediting_65876	chr1_214356382_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-708-3p	chr1	214356378	214356385	8mer-1a	214356378	214356399	152	-13.84
ADediting_65876	chr1_214356382_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-8067	chr1	214356381	214356387	7mer-m8	214356380	214356401	150	-10.96
ADediting_65877	chr1_214356397_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6811-3p	chr1	214356394	214356400	7mer-m8	214356393	214356412	154	-20.81
ADediting_65878	chr1_214356399_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3164	chr1	214356397	214356404	8mer-1a	214356397	214356418	141	-17.71
ADediting_65878	chr1_214356399_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6811-3p	chr1	214356394	214356400	7mer-m8	214356393	214356412	154	-20.81
ADediting_65879	chr1_214356403_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-3164	chr1	214356397	214356404	8mer-1a	214356397	214356418	141	-17.71
ADediting_65880	chr1_214356409_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-197-3p	chr1	214356409	214356415	7mer-m8	214356408	214356429	142	-12.35
ADediting_65880	chr1_214356409_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-6884-3p	chr1	214356406	214356412	7mer-m8	214356405	214356427	145	-21.33

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_65959

chr1_214530427_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-1281

chr1

214530427

214530433

7mer-m8

214530426

214530442

143

-19.73

ADediting_65962

chr1_214530519_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-630

chr1

214530513

214530520

8mer-1a

214530513

214530533

150

-15.14

ADediting_65962

chr1_214530519_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-6844

chr1

214530517

214530524

8mer-1a

214530517

214530537

140

-8.12

ADediting_65964

chr1_214530535_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-412-3p

chr1

214530535

214530541

7mer-m8

214530534

214530556

154

-18.91

ADediting_65964

chr1_214530535_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-4508

chr1

214530530

214530536

7mer-m8

214530529

214530545

140

-21.85

ADediting_65964

chr1_214530535_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-6754-3p

chr1

214530535

214530541

7mer-m8

214530534

214530558

150

-20.19

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_65959

chr1_214530427_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-5001-3p

chr1

214530425

214530431

7mer-m8

214530424

214530448

149

-20.49

ADediting_65959

chr1_214530427_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-6836-3p

chr1

214530427

214530433

7mer-m8

214530426

214530445

142

-20.37

ADediting_65960

chr1_214530450_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-1260b

chr1

214530450

214530456

7mer-m8

214530449

214530467

153

-17.24

ADediting_65960

chr1_214530450_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-532-3p

chr1

214530449

214530455

7mer-m8

214530448

214530467

147

-20.85

ADediting_65960

chr1_214530450_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-6749-3p

chr1

214530447

214530453

7mer-m8

214530446

214530466

143

-19.9

ADediting_65963

chr1_214530522_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-3674

chr1

214530520

214530527

8mer-1a

214530520

214530541

142

-8.83

ADediting_65964

chr1_214530535_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-193b-5p

chr1

214530531

214530537

7mer-m8

214530530

214530551

142

-17.74

ADediting_65965

chr1_214530543_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-4716-5p

chr1

214530540

214530546

7mer-m8

214530539

214530560

148

-14.09

ADediting_65965

chr1_214530543_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-744-3p

chr1

214530543

214530549

7mer-m8

214530542

214530567

145

-14.76

ADediting_65966

chr1_214530555_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-3663-5p

chr1

214530554

214530560

7mer-m8

214530553

214530572

148

-22.25

ADediting_65966

chr1_214530555_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-6131

chr1

214530553

214530559

7mer-m8

214530552

214530570

140

-18.33

ADediting_65966

chr1_214530555_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-6843-3p

chr1

214530555

214530561

7mer-m8

214530554

214530573

152

-19

ADediting_65966

chr1_214530555_-

ENSG00000152104.12

ENST00000491277.1

PTPN14-204

hsa-miR-6848-3p

chr1

214530555

214530561

7mer-m8

214530554

214530571

142

-14.3

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1097295

chr3_85385762_+

ENSG00000152104.12

ENST00000543945.5

PTPN14-205

hsa-miR-5688

chr1

214357967

214357973

7mer-m8

214357966

214357985

144

-12.37

ADediting_1337758

chr7_5495892_-

ENSG00000152104.12

ENST00000543945.5

PTPN14-205

hsa-miR-589-5p

chr1

214377970

214377977

8mer-1a

214377970

214377990

145

-19.31

ADediting_1391023

chr8_140732605_-

ENSG00000152104.12

ENST00000543945.5

PTPN14-205

hsa-miR-151a-3p

chr1

214384316

214384322

7mer-m8

214384315

214384337

153

-14.4

ADediting_1471004

chr9_63819627_+

ENSG00000152104.12

ENST00000366956.10

PTPN14-201

hsa-miR-4477b

chr1

214349088

214349094

7mer-m8

214349087

214349107

148

-11.7

ADediting_1535953

chr14_101045971_+

ENSG00000152104.12

ENST00000366956.10

PTPN14-201

hsa-miR-381-3p

chr1

214353754

214353760

7mer-m8

214353753

214353773

148

-15.4

ADediting_1535954

chr14_101045974_+

ENSG00000152104.12

ENST00000543945.5

PTPN14-205

hsa-miR-381-3p

chr1

214384627

214384633

7mer-m8

214384626

214384645

155

-19.2

ADediting_1556067

chr19_40282625_-

ENSG00000152104.12

ENST00000366956.10

PTPN14-201

hsa-miR-641

chr1

214355302

214355309

8mer-1a

214355302

214355326

157

-18.71

ADediting_1556067

chr19_40282625_-

ENSG00000152104.12

ENST00000543945.5

PTPN14-205

hsa-miR-641

chr1

214383478

214383484

7mer-m8

214383477

214383501

142

-14.63

ADediting_1631458

chr19_40282624_-

ENSG00000152104.12

ENST00000366956.10

PTPN14-201

hsa-miR-641

chr1

214349684

214349690

7mer-m8

214349683

214349707

159

-19.79

ADediting_1631458

chr19_40282624_-

ENSG00000152104.12

ENST00000366956.10

PTPN14-201

hsa-miR-641

chr1

214354555

214354561

7mer-m8

214354554

214354580

145

-16.12

ADediting_1631458

chr19_40282624_-

ENSG00000152104.12

ENST00000366956.10

PTPN14-201

hsa-miR-641

chr1

214355552

214355558

7mer-m8

214355551

214355573

164

-19.77

ADediting_291761

chr11_93733708_-

ENSG00000152104.12

ENST00000543945.5

PTPN14-205

hsa-miR-1304-3p

chr1

214383727

214383734

8mer-1a

214383727

214383748

143

-16.1

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_107020	chr1_37500952_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-5581-3p	chr1	214353900	214353906	7mer-m8	214353899	214353920	140	-9.84
ADediting_107020	chr1_37500952_-	ENSG00000152104.12	ENST00000543945.5	PTPN14-205	hsa-miR-5581-3p	chr1	214383894	214383900	7mer-m8	214383893	214383915	155	-20.3
ADediting_1097295	chr3_85385762_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-5688	chr1	214349383	214349389	7mer-m8	214349382	214349403	142	-8.79
ADediting_1097295	chr3_85385762_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-5688	chr1	214349549	214349555	7mer-m8	214349548	214349569	140	-9.99
ADediting_1535951	chr14_100874558_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-337-3p	chr1	214349098	214349104	7mer-m8	214349097	214349117	150	-13.64
ADediting_1535951	chr14_100874558_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-337-3p	chr1	214350309	214350316	8mer-1a	214350309	214350331	146	-12.12
ADediting_1535953	chr14_101045971_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-381-3p	chr1	214350888	214350895	8mer-1a	214350888	214350907	143	-9.4
ADediting_1535953	chr14_101045971_+	ENSG00000152104.12	ENST00000543945.5	PTPN14-205	hsa-miR-381-3p	chr1	214384754	214384760	7mer-m8	214384753	214384774	145	-12.22
ADediting_1535954	chr14_101045974_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-381-3p	chr1	214350888	214350895	8mer-1a	214350888	214350907	143	-9.4
ADediting_1535954	chr14_101045974_+	ENSG00000152104.12	ENST00000543945.5	PTPN14-205	hsa-miR-381-3p	chr1	214384754	214384760	7mer-m8	214384753	214384774	145	-12.22
ADediting_1596844	chr1_162342605_+	ENSG00000152104.12	ENST00000543945.5	PTPN14-205	hsa-miR-556-3p	chr1	214397918	214397924	7mer-m8	214397917	214397937	154	-13.27
ADediting_286380	chr11_79422188_-	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-5579-3p	chr1	214350123	214350129	7mer-m8	214350122	214350139	142	-13.88
ADediting_527135	chr16_24203190_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-1273h-3p	chr1	214356735	214356742	8mer-1a	214356735	214356757	150	-16.73
ADediting_843620	chr2_207754818_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4775	chr1	214354206	214354212	7mer-m8	214354205	214354226	146	-10.32
ADediting_843620	chr2_207754818_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-4775	chr1	214356123	214356129	7mer-m8	214356122	214356144	153	-6.41
ADediting_98288	chr1_32086990_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-5585-3p	chr1	214349060	214349066	7mer-m8	214349059	214349079	144	-9.09
ADediting_98288	chr1_32086990_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-5585-3p	chr1	214351456	214351462	7mer-m8	214351455	214351478	143	-15.54
ADediting_98289	chr1_32086992_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-5585-3p	chr1	214349060	214349066	7mer-m8	214349059	214349079	144	-9.09
ADediting_98289	chr1_32086992_+	ENSG00000152104.12	ENST00000366956.10	PTPN14-201	hsa-miR-5585-3p	chr1	214351456	214351462	7mer-m8	214351455	214351478	143	-15.54

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for PTPN14

- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000366956.10	protein_coding
ENST00000491277.1	lncRNA

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_65769	ENST00000366956.10	chr1_214349313_-	12747	-4436.80	-4431.50	-4503.73
ADediting_65770	ENST00000366956.10	chr1_214349315_-	12745	-4436.90	-4431.50	-4503.73
ADediting_65771	ENST00000366956.10	chr1_214349358_-	12702	-4430.10	-4431.50	-4503.73
ADediting_65772	ENST00000366956.10	chr1_214350544_-	11516	-4431.60	-4431.50	-4503.73
ADediting_65773	ENST00000366956.10	chr1_214350547_-	11513	-4431.60	-4431.50	-4503.73
ADediting_65774	ENST00000366956.10	chr1_214350550_-	11510	-4431.90	-4431.50	-4503.73
ADediting_65775	ENST00000366956.10	chr1_214350552_-	11508	-4431.50	-4431.50	-4503.73
ADediting_65776	ENST00000366956.10	chr1_214350554_-	11506	-4431.20	-4431.50	-4503.73
ADediting_65777	ENST00000366956.10	chr1_214350555_-	11505	-4431.60	-4431.50	-4503.73
ADediting_65778	ENST00000366956.10	chr1_214350556_-	11504	-4431.60	-4431.50	-4503.73
ADediting_65779	ENST00000366956.10	chr1_214350557_-	11503	-4431.60	-4431.50	-4503.73
ADediting_65780	ENST00000366956.10	chr1_214350570_-	11490	-4430.60	-4431.50	-4503.73
ADediting_65781	ENST00000366956.10	chr1_214350576_-	11484	-4433.00	-4431.50	-4503.73
ADediting_65782	ENST00000366956.10	chr1_214350578_-	11482	-4431.50	-4431.50	-4503.73
ADediting_65783	ENST00000366956.10	chr1_214350593_-	11467	-4431.80	-4431.50	-4503.73
ADediting_65784	ENST00000366956.10	chr1_214350665_-	11395	-4432.40	-4431.50	-4503.73
ADediting_65785	ENST00000366956.10	chr1_214350669_-	11391	-4431.50	-4431.50	-4503.73
ADediting_65786	ENST00000366956.10	chr1_214350673_-	11387	-4430.80	-4431.50	-4503.73
ADediting_65787	ENST00000366956.10	chr1_214350678_-	11382	-4431.50	-4431.50	-4503.73
ADediting_65788	ENST00000366956.10	chr1_214350679_-	11381	-4431.60	-4431.50	-4503.73
ADediting_65789	ENST00000366956.10	chr1_214350687_-	11373	-4428.10	-4431.50	-4503.73
ADediting_65790	ENST00000366956.10	chr1_214350689_-	11371	-4436.30	-4431.50	-4503.73
ADediting_65791	ENST00000366956.10	chr1_214350697_-	11363	-4435.70	-4431.50	-4503.73
ADediting_65792	ENST00000366956.10	chr1_214350701_-	11359	-4437.70	-4431.50	-4503.73
ADediting_65793	ENST00000366956.10	chr1_214350705_-	11355	-4431.20	-4431.50	-4503.73
ADediting_65794	ENST00000366956.10	chr1_214350708_-	11352	-4431.50	-4431.50	-4503.73
ADediting_65795	ENST00000366956.10	chr1_214350752_-	11308	-4428.50	-4431.50	-4503.73
ADediting_65796	ENST00000366956.10	chr1_214350753_-	11307	-4431.60	-4431.50	-4503.73
ADediting_65797	ENST00000366956.10	chr1_214350754_-	11306	-4431.10	-4431.50	-4503.73
ADediting_65798	ENST00000366956.10	chr1_214350760_-	11300	-4431.10	-4431.50	-4503.73
ADediting_65799	ENST00000366956.10	chr1_214350762_-	11298	-4431.50	-4431.50	-4503.73
ADediting_65800	ENST00000366956.10	chr1_214350763_-	11297	-4431.20	-4431.50	-4503.73
ADediting_65801	ENST00000366956.10	chr1_214350772_-	11288	-4430.80	-4431.50	-4503.73
ADediting_65802	ENST00000366956.10	chr1_214350777_-	11283	-4431.10	-4431.50	-4503.73
ADediting_65803	ENST00000366956.10	chr1_214350778_-	11282	-4434.60	-4431.50	-4503.73
ADediting_65804	ENST00000366956.10	chr1_214350786_-	11274	-4430.80	-4431.50	-4503.73
ADediting_65805	ENST00000366956.10	chr1_214350791_-	11269	-4430.60	-4431.50	-4503.73
ADediting_65806	ENST00000366956.10	chr1_214350815_-	11245	-4430.60	-4431.50	-4503.73
ADediting_65807	ENST00000366956.10	chr1_214350834_-	11226	-4431.50	-4431.50	-4503.73
ADediting_65808	ENST00000366956.10	chr1_214350835_-	11225	-4431.60	-4431.50	-4503.73
ADediting_65809	ENST00000366956.10	chr1_214350841_-	11219	-4431.10	-4431.50	-4503.73
ADediting_65810	ENST00000366956.10	chr1_214350857_-	11203	-4430.80	-4431.50	-4503.73
ADediting_65811	ENST00000366956.10	chr1_214350975_-	11085	-4437.90	-4431.50	-4503.73
ADediting_65812	ENST00000366956.10	chr1_214351091_-	10969	-4431.50	-4431.50	-4503.73
ADediting_65813	ENST00000366956.10	chr1_214351103_-	10957	-4431.20	-4431.50	-4503.73
ADediting_65814	ENST00000366956.10	chr1_214351104_-	10956	-4431.60	-4431.50	-4503.73
ADediting_65815	ENST00000366956.10	chr1_214351122_-	10938	-4435.60	-4431.50	-4503.73
ADediting_65816	ENST00000366956.10	chr1_214351133_-	10927	-4430.90	-4431.50	-4503.73
ADediting_65817	ENST00000366956.10	chr1_214351140_-	10920	-4431.50	-4431.50	-4503.73
ADediting_65818	ENST00000366956.10	chr1_214351141_-	10919	-4431.50	-4431.50	-4503.73
ADediting_65819	ENST00000366956.10	chr1_214351142_-	10918	-4434.60	-4431.50	-4503.73
ADediting_65820	ENST00000366956.10	chr1_214351151_-	10909	-4438.70	-4431.50	-4503.73
ADediting_65821	ENST00000366956.10	chr1_214351153_-	10907	-4430.80	-4431.50	-4503.73
ADediting_65822	ENST00000366956.10	chr1_214351162_-	10898	-4431.10	-4431.50	-4503.73
ADediting_65823	ENST00000366956.10	chr1_214351177_-	10883	-4430.60	-4431.50	-4503.73
ADediting_65824	ENST00000366956.10	chr1_214351179_-	10881	-4431.20	-4431.50	-4503.73
ADediting_65825	ENST00000366956.10	chr1_214351182_-	10878	-4431.20	-4431.50	-4503.73
ADediting_65826	ENST00000366956.10	chr1_214351188_-	10872	-4431.50	-4431.50	-4503.73
ADediting_65827	ENST00000366956.10	chr1_214351190_-	10870	-4436.10	-4431.50	-4503.73
ADediting_65828	ENST00000366956.10	chr1_214351196_-	10864	-4431.50	-4431.50	-4503.73
ADediting_65829	ENST00000366956.10	chr1_214351197_-	10863	-4431.60	-4431.50	-4503.73
ADediting_65830	ENST00000366956.10	chr1_214351205_-	10855	-4435.30	-4431.50	-4503.73
ADediting_65831	ENST00000366956.10	chr1_214351210_-	10850	-4431.10	-4431.50	-4503.73
ADediting_65832	ENST00000366956.10	chr1_214351213_-	10847	-4436.30	-4431.50	-4503.73
ADediting_65833	ENST00000366956.10	chr1_214351221_-	10839	-4430.20	-4431.50	-4503.73
ADediting_65834	ENST00000366956.10	chr1_214351223_-	10837	-4428.50	-4431.50	-4503.73
ADediting_65835	ENST00000366956.10	chr1_214351226_-	10834	-4430.90	-4431.50	-4503.73
ADediting_65836	ENST00000366956.10	chr1_214351233_-	10827	-4431.20	-4431.50	-4503.73
ADediting_65837	ENST00000366956.10	chr1_214351236_-	10824	-4431.00	-4431.50	-4503.73
ADediting_65838	ENST00000366956.10	chr1_214351237_-	10823	-4434.50	-4431.50	-4503.73
ADediting_65839	ENST00000366956.10	chr1_214351280_-	10780	-4429.20	-4431.50	-4503.73
ADediting_65840	ENST00000366956.10	chr1_214351282_-	10778	-4430.60	-4431.50	-4503.73
ADediting_65841	ENST00000366956.10	chr1_214351290_-	10770	-4432.60	-4431.50	-4503.73
ADediting_65842	ENST00000366956.10	chr1_214355764_-	6296	-4437.30	-4431.50	-4503.73
ADediting_65843	ENST00000366956.10	chr1_214355779_-	6281	-4430.90	-4431.50	-4503.73
ADediting_65844	ENST00000366956.10	chr1_214355793_-	6267	-4431.50	-4431.50	-4503.73
ADediting_65845	ENST00000366956.10	chr1_214355794_-	6266	-4437.90	-4431.50	-4503.73
ADediting_65846	ENST00000366956.10	chr1_214355795_-	6265	-4431.20	-4431.50	-4503.73
ADediting_65847	ENST00000366956.10	chr1_214355796_-	6264	-4431.60	-4431.50	-4503.73
ADediting_65848	ENST00000366956.10	chr1_214355799_-	6261	-4431.50	-4431.50	-4503.73
ADediting_65849	ENST00000366956.10	chr1_214355802_-	6258	-4431.50	-4431.50	-4503.73
ADediting_65850	ENST00000366956.10	chr1_214355803_-	6257	-4431.90	-4431.50	-4503.73
ADediting_65851	ENST00000366956.10	chr1_214355806_-	6254	-4431.50	-4431.50	-4503.73
ADediting_65852	ENST00000366956.10	chr1_214355807_-	6253	-4431.60	-4431.50	-4503.73
ADediting_65853	ENST00000366956.10	chr1_214355808_-	6252	-4431.20	-4431.50	-4503.73
ADediting_65854	ENST00000366956.10	chr1_214355813_-	6247	-4438.70	-4431.50	-4503.73
ADediting_65855	ENST00000366956.10	chr1_214355823_-	6237	-4431.20	-4431.50	-4503.73
ADediting_65856	ENST00000366956.10	chr1_214355824_-	6236	-4431.60	-4431.50	-4503.73
ADediting_65857	ENST00000366956.10	chr1_214355825_-	6235	-4431.60	-4431.50	-4503.73
ADediting_65858	ENST00000366956.10	chr1_214355826_-	6234	-4431.90	-4431.50	-4503.73
ADediting_65859	ENST00000366956.10	chr1_214355827_-	6233	-4437.90	-4431.50	-4503.73
ADediting_65860	ENST00000366956.10	chr1_214355873_-	6187	-4433.90	-4431.50	-4503.73
ADediting_65861	ENST00000366956.10	chr1_214355875_-	6185	-4438.40	-4431.50	-4503.73
ADediting_65862	ENST00000366956.10	chr1_214355891_-	6169	-4431.50	-4431.50	-4503.73
ADediting_65863	ENST00000366956.10	chr1_214355904_-	6156	-4430.80	-4431.50	-4503.73
ADediting_65864	ENST00000366956.10	chr1_214355909_-	6151	-4431.50	-4431.50	-4503.73
ADediting_65865	ENST00000366956.10	chr1_214355910_-	6150	-4431.60	-4431.50	-4503.73
ADediting_1598995	ENST00000366956.10	chr1_214356091_-	5969	-4432.93	-4431.50	-4503.73
ADediting_65866	ENST00000366956.10	chr1_214356289_-	5771	-4431.90	-4431.50	-4503.73
ADediting_65867	ENST00000366956.10	chr1_214356311_-	5749	-4429.80	-4431.50	-4503.73
ADediting_65868	ENST00000366956.10	chr1_214356316_-	5744	-4431.30	-4431.50	-4503.73
ADediting_65869	ENST00000366956.10	chr1_214356329_-	5731	-4430.70	-4431.50	-4503.73
ADediting_65870	ENST00000366956.10	chr1_214356336_-	5724	-4431.10	-4431.50	-4503.73
ADediting_65871	ENST00000366956.10	chr1_214356337_-	5723	-4431.60	-4431.50	-4503.73
ADediting_65872	ENST00000366956.10	chr1_214356338_-	5722	-4431.90	-4431.50	-4503.73
ADediting_65873	ENST00000366956.10	chr1_214356339_-	5721	-4434.10	-4431.50	-4503.73
ADediting_65874	ENST00000366956.10	chr1_214356348_-	5712	-4431.50	-4431.50	-4503.73
ADediting_65875	ENST00000366956.10	chr1_214356378_-	5682	-4437.90	-4431.50	-4503.73
ADediting_65876	ENST00000366956.10	chr1_214356382_-	5678	-4438.10	-4431.50	-4503.73
ADediting_65877	ENST00000366956.10	chr1_214356397_-	5663	-4431.50	-4431.50	-4503.73
ADediting_65878	ENST00000366956.10	chr1_214356399_-	5661	-4431.10	-4431.50	-4503.73
ADediting_65879	ENST00000366956.10	chr1_214356403_-	5657	-4431.50	-4431.50	-4503.73
ADediting_65880	ENST00000366956.10	chr1_214356409_-	5651	-4430.90	-4431.50	-4503.73
ADediting_65881	ENST00000366956.10	chr1_214356431_-	5629	-4431.50	-4431.50	-4503.73

RNA A-to-I editing in lncRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_65959	ENST00000491277.1	chr1_214530427_-	3401	-1923.80	-1919.10	-1922.40
ADediting_65960	ENST00000491277.1	chr1_214530450_-	3378	-1918.30	-1919.10	-1922.40
ADediting_65961	ENST00000491277.1	chr1_214530513_-	3315	-1918.80	-1919.10	-1922.40
ADediting_65962	ENST00000491277.1	chr1_214530519_-	3309	-1919.20	-1919.10	-1922.40
ADediting_65963	ENST00000491277.1	chr1_214530522_-	3306	-1919.10	-1919.10	-1922.40
ADediting_65964	ENST00000491277.1	chr1_214530535_-	3293	-1919.10	-1919.10	-1922.40
ADediting_65965	ENST00000491277.1	chr1_214530543_-	3285	-1919.40	-1919.10	-1922.40
ADediting_65966	ENST00000491277.1	chr1_214530555_-	3273	-1918.40	-1919.10	-1922.40
ADediting_65967	ENST00000491277.1	chr1_214530602_-	3226	-1919.10	-1919.10	-1922.40

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Relation with ADAR for PTPN14

Correlation between ADAR gene expression and RNA editing frequency

Tissue	ADeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
AC	ADediting_65769	chr1_214349313_-	9.80094497461712e-08	0.329322123970876	0.000271024983193204	0.228403322192097	0.0509509357042412	0.123594224341386
STG	ADediting_65812	chr1_214351091_-	0.0361067780652486	0.229044820736134	0.023873908170431	0.246372543360121	0.00417190997718208	0.309505429122494
STG	ADediting_65819	chr1_214351142_-	0.000372643093946408	0.379353480629797	0.064627781646774	0.202553830309507	0.625074296060047	0.0540898450540976
TCX	ADediting_65840	chr1_214351282_-	9.51175294201287e-05	0.313219736986192	3.22562937548623e-05	0.332485326951317	0.0704645245594838	-0.148120415008993
TCX	ADediting_65859	chr1_214355827_-	6.36252027718444e-05	0.320536225493877	0.0137879103162836	0.200710472852028	0.234650461562219	0.0976224070277116
TCX	ADediting_65861	chr1_214355875_-	1.20297176138657e-06	0.384304755112531	0.000246311159360827	0.295107096733071	0.809908306469587	-0.0198041059519491
TCX	ADediting_65862	chr1_214355891_-	3.16505426862234e-08	0.432852550542105	6.59838747529721e-05	0.319881608031702	0.944109048065261	0.00577239714054213
TCX	ADediting_65876	chr1_214356382_-	2.62440446254614e-07	0.405566011397141	0.000427911709486291	0.284020091651475	0.0976365087077929	0.135755035883424
TCX	ADediting_65877	chr1_214356397_-	6.88980520291949e-08	0.423096631404862	0.000784704003355733	0.27129906341446	0.0102461752165812	0.20905528868959
TCX	ADediting_65881	chr1_214356431_-	2.79746377290512e-05	0.334928746869982	0.00347582054996894	0.2371658358555	0.0581867062204786	0.155028467573835
DLPFC	ADediting_65914	chr1_214521468_-	0.283183531748769	0.0611433511645255	0.140016050547708	-0.0840070500966089	2.93562381218109e-16	0.442012295106007
DLPFC	ADediting_65915	chr1_214521469_-	0.363986997666353	0.051733699750719	0.127845134359602	-0.0866682915162117	1.90907238005628e-12	0.385865627997386
DLPFC	ADediting_65930	chr1_214522110_-	0.511439354612866	-0.0374304066781235	0.0202905244296493	-0.131777064994682	5.13169866663722e-08	0.303260775256701
DLPFC	ADediting_65936	chr1_214522214_-	0.309044633828328	-0.0579602722225164	0.00151434999974891	-0.179413712942979	1.41279985018896e-11	0.371433474723146
DLPFC	ADediting_65937	chr1_214522224_-	0.121367270676485	-0.088165462262442	0.000845247151061293	-0.18861702984916	1.15277887853369e-09	0.336902686569968

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	6.4073290779738e-34	0.61708997117996	3.30248610371785e-21	0.502156577896295	4.64689350138872e-11	0.362496462014815
AC	8.3308483688492e-12	0.414612113568474	5.30471787802853e-07	0.310839200185885	3.83330357266682e-20	0.537804953019519
PCC	2.39239503507609e-12	0.478996022731483	4.67505366417592e-10	0.4313481736069	1.31736269034583e-06	0.341654510036413
CER	6.82287261164994e-07	0.392398493751268	0.000597514201618452	0.277091291384377	1.50108128297791e-16	0.608307679714001
TCX	1.1933899406522e-25	0.724081236902658	2.40811834977588e-12	0.532180992440999	0.187270578748221	0.108260025373892
FP	3.58687988054687e-35	0.762911848648907	9.0950610377498e-24	0.661514833614018	6.06438708269753e-07	0.36363318631821
IFG	0.000120305993930864	0.693703694288929	0.000625952457687587	0.636421890886854	0.052446686437317	0.392263762559894
PG	3.05765826345778e-43	0.803110674078131	1.55707553767952e-28	0.69841341370397	0.916147944125627	0.00777230877245325
STG	3.74000146164848e-08	0.55701812838394	5.96938344574205e-06	0.47153454013439	0.000439845871004654	0.375032739660434

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Relation with AD stages for PTPN14

Correlation between AD stages and RNA editing frequency

Tissue	ADeditomID	position	P-val	Coeff.
TCX	ADediting_65875	chr1_214356378_-	5.78082060309481e-05	0.380335527124063
TCX	ADediting_65877	chr1_214356397_-	6.79466716571906e-05	0.376992440341125
IFG	ADediting_65874	chr1_214356348_-	0.04670630829224	-0.401430350398264

Correlation between AD stages and this gene's expression

Tissue	P-val	Coeff.
CER	5.98853787489591e-07	0.458621960396484
TCX	1.99446926655327e-07	0.479459450830859

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RelatedDrugs for PTPN14

Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for PTPN14

Diseases associated with this gene. (DisGeNet 4.0)

Gene	Disease ID	Disease name	# pubmeds	Source
PTPN14	C0006142	Malignant neoplasm of breast	1	UNIPROT
PTPN14	C0007117	Basal cell carcinoma	1	CTD_human
PTPN14	C0008297	Choanal Atresia	1	GENOMICS_ENGLAND
PTPN14	C0024228	Lymphatic Diseases	1	GENOMICS_ENGLAND
PTPN14	C0027819	Neuroblastoma	1	CTD_human
PTPN14	C1368275	Pigmented Basal Cell Carcinoma	1	CTD_human

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