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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for CEP126

check button Gene summary
Gene informationGene symbol

CEP126

Gene ID

57562

Gene namecentrosomal protein 126
SynonymsKIAA1377
Cytomap

11q22.1

Type of geneprotein-coding
Descriptioncentrosomal protein of 126 kDacentrosomal protein 126kDa
Modification date20200313
UniProtAcc

Q9P2H0,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for CEP126

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_229331(101951215, +), ADediting_229332(101951216, +), ADediting_229333(101951232, +), ADediting_229334(101951242, +), ADediting_229335(101951248, +), ADediting_229336(101951249, +), ADediting_229337(101951275, +), ADediting_229338(101951289, +), ADediting_229339(101951302, +), ADediting_229340(101951325, +), ADediting_229341(101951326, +), ADediting_229342(101951359, +), ADediting_229343(101951361, +), ADediting_229344(101951365, +), ADediting_229345(101951373, +), ADediting_229346(101951381, +), ADediting_229347(101951391, +), ADediting_229348(101951406, +), ADediting_229349(101951411, +), ADediting_229350(101951421, +), ADediting_229351(101951427, +), ADediting_229352(101951466, +), ADediting_229353(101954060, +), ADediting_229354(101954131, +), ADediting_229355(101954153, +), ADediting_229356(101954173, +), ADediting_229357(101954177, +), ADediting_229358(101954288, +), ADediting_229359(101954300, +), ADediting_229360(101954306, +), ADediting_229361(101964096, +), ADediting_229362(101964105, +), ADediting_229363(101964182, +), ADediting_229364(101964204, +), ADediting_229365(101964512, +), ADediting_229366(101964513, +), ADediting_229367(101969052, +), ADediting_229368(101969124, +), ADediting_229369(101969150, +), ADediting_229370(101969210, +), ADediting_229371(101969289, +), ADediting_229372(101971015, +), ADediting_229373(101971037, +), ADediting_229374(101971068, +), ADediting_229375(101971080, +), ADediting_229376(101971085, +), ADediting_229377(101971097, +), ADediting_229378(101971102, +), ADediting_229379(101971107, +), ADediting_229380(101971109, +), ADediting_229381(101971160, +), ADediting_229382(101971169, +), ADediting_229383(101971226, +), ADediting_229384(101971236, +), ADediting_229385(101971239, +), ADediting_229386(101971988, +), ADediting_229387(101972095, +), ADediting_229388(101972305, +), ADediting_229389(101972332, +), ADediting_229390(101972541, +), ADediting_229391(101972619, +), ADediting_229392(101972648, +), ADediting_229393(101972654, +), ADediting_229394(101972680, +), ADediting_229395(101972690, +), ADediting_229396(101972698, +), ADediting_229397(101972703, +), ADediting_229398(101973378, +), ADediting_229399(101973385, +), ADediting_229400(101973386, +), ADediting_229401(101973393, +), ADediting_229402(101973403, +), ADediting_229403(101973428, +), ADediting_229404(101973430, +), ADediting_229405(101973457, +), ADediting_229406(101975784, +), ADediting_229407(101975877, +), ADediting_229408(101975878, +), ADediting_229409(101977588, +), ADediting_229410(101979011, +), ADediting_229411(101981500, +), ADediting_229412(101981567, +), ADediting_229413(101981570, +), ADediting_229414(101986235, +), ADediting_229415(101993956, +), ADediting_229416(101993978, +), ADediting_229417(101993979, +), ADediting_229418(101993984, +), ADediting_229419(101994024, +), ADediting_229420(101994038, +), ADediting_229421(101994048, +), ADediting_229422(101994050, +), ADediting_229423(101994058, +), ADediting_229424(101994072, +), ADediting_229425(101994124, +), ADediting_229426(101994147, +), ADediting_229427(101994156, +), ADediting_229428(101994167, +), ADediting_229429(101994184, +), ADediting_229430(101994185, +), ADediting_229431(101997091, +), ADediting_229432(101997107, +), ADediting_229433(101997118, +), ADediting_229434(101997131, +), ADediting_229435(101997137, +), ADediting_229436(101997138, +), ADediting_229437(101997155, +), ADediting_229438(101997164, +), ADediting_229439(101997167, +), ADediting_229440(101997177, +), ADediting_229441(101997183, +), ADediting_229442(101997195, +), ADediting_229443(101997204, +), ADediting_229444(101997221, +), ADediting_229445(101997235, +), ADediting_229446(101997247, +), ADediting_229447(101997297, +), ADediting_229448(101997310, +), ADediting_229449(101998356, +), ADediting_229450(101998375, +), ADediting_229451(101998464, +), ADediting_229452(101998509, +), ADediting_229453(101999792, +), ADediting_229454(101999864, +), ADediting_229455(101999914, +), ADediting_229456(101999928, +), ADediting_229457(101999949, +), ADediting_229458(102000069, +), ADediting_229459(102000104, +), ADediting_229460(102000421, +), ADediting_229461(102000581, +), ADediting_229462(102000612, +), ADediting_229463(102000624, +), ADediting_1525172(101985347, +), ADediting_1525173(101985387, +), ADediting_1525174(101985440, +), ADediting_1525175(101986083, +), ADediting_1525176(101994192, +), ADediting_1525177(101997077, +), ADediting_1525178(102000033, +), ADediting_1608101(101971120, +), ADediting_1608102(101973379, +), ADediting_1608103(101973451, +), ADediting_1608104(101981374, +), ADediting_1608105(101981394, +), ADediting_1608106(101981419, +), ADediting_1608107(101981420, +), ADediting_1608108(101981423, +), ADediting_1608109(101981433, +), ADediting_1608110(101981467, +), ADediting_1608111(101981478, +), ADediting_1608112(101981492, +),

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RNA editing positional annotations for CEP126 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_229331chr11_101951215_+intronic
ADediting_229332chr11_101951216_+intronic
ADediting_229333chr11_101951232_+intronic
ADediting_229334chr11_101951242_+intronic
ADediting_229335chr11_101951248_+intronic
ADediting_229336chr11_101951249_+intronic
ADediting_229337chr11_101951275_+intronic
ADediting_229338chr11_101951289_+intronic
ADediting_229339chr11_101951302_+intronic
ADediting_229340chr11_101951325_+intronic
ADediting_229341chr11_101951326_+intronic
ADediting_229342chr11_101951359_+intronic
ADediting_229343chr11_101951361_+intronic
ADediting_229344chr11_101951365_+intronic
ADediting_229345chr11_101951373_+intronic
ADediting_229346chr11_101951381_+intronic
ADediting_229347chr11_101951391_+intronic
ADediting_229348chr11_101951406_+intronic
ADediting_229349chr11_101951411_+intronic
ADediting_229350chr11_101951421_+intronic
ADediting_229351chr11_101951427_+intronic
ADediting_229352chr11_101951466_+intronic
ADediting_229353chr11_101954060_+intronic
ADediting_229354chr11_101954131_+intronic
ADediting_229355chr11_101954153_+intronic
ADediting_229356chr11_101954173_+intronic
ADediting_229357chr11_101954177_+intronic
ADediting_229358chr11_101954288_+intronic
ADediting_229359chr11_101954300_+intronic
ADediting_229360chr11_101954306_+intronic
ADediting_229361chr11_101964096_+intronic
ADediting_229362chr11_101964105_+intronic
ADediting_229363chr11_101964182_+intronic
ADediting_229364chr11_101964204_+intronic
ADediting_229365chr11_101964512_+intronic
ADediting_229366chr11_101964513_+intronic
ADediting_229367chr11_101969052_+intronic
ADediting_229368chr11_101969124_+intronic
ADediting_229369chr11_101969150_+intronic
ADediting_229370chr11_101969210_+intronic
ADediting_229371chr11_101969289_+intronic
ADediting_229372chr11_101971015_+intronic
ADediting_229373chr11_101971037_+intronic
ADediting_229374chr11_101971068_+intronic
ADediting_229375chr11_101971080_+intronic
ADediting_229376chr11_101971085_+intronic
ADediting_229377chr11_101971097_+intronic
ADediting_229378chr11_101971102_+intronic
ADediting_229379chr11_101971107_+intronic
ADediting_229380chr11_101971109_+intronic
ADediting_229381chr11_101971160_+intronic
ADediting_229382chr11_101971169_+intronic
ADediting_229383chr11_101971226_+intronic
ADediting_229384chr11_101971236_+intronic
ADediting_229385chr11_101971239_+intronic
ADediting_229386chr11_101971988_+intronic
ADediting_229387chr11_101972095_+intronic
ADediting_229388chr11_101972305_+intronic
ADediting_229389chr11_101972332_+intronic
ADediting_229390chr11_101972541_+intronic
ADediting_229391chr11_101972619_+intronic
ADediting_229392chr11_101972648_+intronic
ADediting_229393chr11_101972654_+intronic
ADediting_229394chr11_101972680_+intronic
ADediting_229395chr11_101972690_+intronic
ADediting_229396chr11_101972698_+intronic
ADediting_229397chr11_101972703_+intronic
ADediting_229398chr11_101973378_+intronic
ADediting_229399chr11_101973385_+intronic
ADediting_229400chr11_101973386_+intronic
ADediting_229401chr11_101973393_+intronic
ADediting_229402chr11_101973403_+intronic
ADediting_229403chr11_101973428_+intronic
ADediting_229404chr11_101973430_+intronic
ADediting_229405chr11_101973457_+intronic
ADediting_229406chr11_101975784_+intronic
ADediting_229407chr11_101975877_+intronic
ADediting_229408chr11_101975878_+intronic
ADediting_229409chr11_101977588_+intronic
ADediting_229410chr11_101979011_+intronic
ADediting_229411chr11_101981500_+intronic
ADediting_229412chr11_101981567_+intronic
ADediting_229413chr11_101981570_+intronic
ADediting_229414chr11_101986235_+intronic
ADediting_229415chr11_101993956_+intronic
ADediting_229416chr11_101993978_+intronic
ADediting_229417chr11_101993979_+intronic
ADediting_229418chr11_101993984_+intronic
ADediting_229419chr11_101994024_+intronic
ADediting_229420chr11_101994038_+intronic
ADediting_229421chr11_101994048_+intronic
ADediting_229422chr11_101994050_+intronic
ADediting_229423chr11_101994058_+intronic
ADediting_229424chr11_101994072_+intronic
ADediting_229425chr11_101994124_+intronic
ADediting_229426chr11_101994147_+intronic
ADediting_229427chr11_101994156_+intronic
ADediting_229428chr11_101994167_+intronic
ADediting_229429chr11_101994184_+intronic
ADediting_229430chr11_101994185_+intronic
ADediting_229431chr11_101997091_+intronic
ADediting_229432chr11_101997107_+intronic
ADediting_229433chr11_101997118_+intronic
ADediting_229434chr11_101997131_+intronic
ADediting_229435chr11_101997137_+intronic
ADediting_229436chr11_101997138_+intronic
ADediting_229437chr11_101997155_+intronic
ADediting_229438chr11_101997164_+intronic
ADediting_229439chr11_101997167_+intronic
ADediting_229440chr11_101997177_+intronic
ADediting_229441chr11_101997183_+intronic
ADediting_229442chr11_101997195_+intronic
ADediting_229443chr11_101997204_+intronic
ADediting_229444chr11_101997221_+intronic
ADediting_229445chr11_101997235_+intronic
ADediting_229446chr11_101997247_+intronic
ADediting_229447chr11_101997297_+intronic
ADediting_229448chr11_101997310_+intronic
ADediting_229449chr11_101998356_+UTR3
ADediting_229450chr11_101998375_+UTR3
ADediting_229451chr11_101998464_+UTR3
ADediting_229452chr11_101998509_+UTR3
ADediting_229453chr11_101999792_+UTR3
ADediting_229454chr11_101999864_+UTR3
ADediting_229455chr11_101999914_+UTR3
ADediting_229456chr11_101999928_+UTR3
ADediting_229457chr11_101999949_+UTR3
ADediting_229458chr11_102000069_+UTR3
ADediting_229459chr11_102000104_+UTR3
ADediting_229460chr11_102000421_+UTR3
ADediting_229461chr11_102000581_+UTR3
ADediting_229462chr11_102000612_+UTR3
ADediting_229463chr11_102000624_+UTR3
ADediting_1525172chr11_101985347_+intronic
ADediting_1525173chr11_101985387_+intronic
ADediting_1525174chr11_101985440_+intronic
ADediting_1525175chr11_101986083_+intronic
ADediting_1525176chr11_101994192_+intronic
ADediting_1525177chr11_101997077_+intronic
ADediting_1525178chr11_102000033_+UTR3
ADediting_1608101chr11_101971120_+intronic
ADediting_1608102chr11_101973379_+intronic
ADediting_1608103chr11_101973451_+intronic
ADediting_1608104chr11_101981374_+intronic
ADediting_1608105chr11_101981394_+intronic
ADediting_1608106chr11_101981419_+intronic
ADediting_1608107chr11_101981420_+intronic
ADediting_1608108chr11_101981423_+intronic
ADediting_1608109chr11_101981433_+intronic
ADediting_1608110chr11_101981467_+intronic
ADediting_1608111chr11_101981478_+intronic
ADediting_1608112chr11_101981492_+intronic

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_229331chr11_101951215_+Low_complexityLow_complexityName=GA-rich
ADediting_229332chr11_101951216_+Low_complexityLow_complexityName=GA-rich
ADediting_229333chr11_101951232_+SINEAluName=AluJr4
ADediting_229334chr11_101951242_+SINEAluName=AluJr4
ADediting_229335chr11_101951248_+SINEAluName=AluJr4
ADediting_229336chr11_101951249_+SINEAluName=AluJr4
ADediting_229337chr11_101951275_+SINEAluName=AluJr4
ADediting_229338chr11_101951289_+SINEAluName=AluJr4
ADediting_229339chr11_101951302_+SINEAluName=AluJr4
ADediting_229340chr11_101951325_+SINEAluName=AluJr4
ADediting_229341chr11_101951326_+SINEAluName=AluJr4
ADediting_229342chr11_101951359_+SINEAluName=AluJr4
ADediting_229343chr11_101951361_+SINEAluName=AluJr4
ADediting_229344chr11_101951365_+SINEAluName=AluJr4
ADediting_229345chr11_101951373_+SINEAluName=AluJr4
ADediting_229346chr11_101951381_+SINEAluName=AluJr4
ADediting_229347chr11_101951391_+SINEAluName=AluJr4
ADediting_229348chr11_101951406_+SINEAluName=AluJr4
ADediting_229349chr11_101951411_+SINEAluName=AluJr4
ADediting_229350chr11_101951421_+SINEAluName=AluJr4
ADediting_229351chr11_101951427_+SINEAluName=AluJr4
ADediting_229352chr11_101951466_+SINEAluName=AluJr4
ADediting_229353chr11_101954060_+SINEAluName=AluSc
ADediting_229354chr11_101954131_+SINEAluName=AluSc
ADediting_229355chr11_101954153_+SINEAluName=AluSc
ADediting_229356chr11_101954173_+SINEAluName=AluSc
ADediting_229357chr11_101954177_+SINEAluName=AluSc
ADediting_229358chr11_101954288_+SINEAluName=AluSc
ADediting_229359chr11_101954300_+SINEAluName=AluSc
ADediting_229360chr11_101954306_+SINEAluName=AluSc
ADediting_229361chr11_101964096_+SINEAluName=AluSz6
ADediting_229362chr11_101964105_+SINEAluName=AluSz6
ADediting_229363chr11_101964182_+SINEAluName=AluSz6
ADediting_229364chr11_101964204_+SINEAluName=AluSz6
ADediting_229365chr11_101964512_+SINEAluName=AluSz
ADediting_229366chr11_101964513_+SINEAluName=AluSz
ADediting_229367chr11_101969052_+SINEAluName=AluJb
ADediting_229368chr11_101969124_+SINEAluName=AluJb
ADediting_229369chr11_101969150_+SINEAluName=AluJb
ADediting_229370chr11_101969210_+SINEAluName=AluJb
ADediting_229371chr11_101969289_+SINEAluName=AluJb
ADediting_229372chr11_101971015_+SINEAluName=AluJb
ADediting_229373chr11_101971037_+SINEAluName=AluJb
ADediting_229374chr11_101971068_+SINEAluName=AluJb
ADediting_229375chr11_101971080_+SINEAluName=AluJb
ADediting_229376chr11_101971085_+SINEAluName=AluJb
ADediting_229377chr11_101971097_+SINEAluName=AluJb
ADediting_229378chr11_101971102_+SINEAluName=AluJb
ADediting_229379chr11_101971107_+SINEAluName=AluJb
ADediting_229380chr11_101971109_+SINEAluName=AluJb
ADediting_229381chr11_101971160_+SINEAluName=AluJb
ADediting_229382chr11_101971169_+SINEAluName=AluJb
ADediting_229383chr11_101971226_+SINEAluName=AluJb
ADediting_229384chr11_101971236_+SINEAluName=AluJb
ADediting_229385chr11_101971239_+SINEAluName=AluJb
ADediting_229386chr11_101971988_+SINEAluName=AluSx1
ADediting_229387chr11_101972095_+SINEAluName=AluSx1
ADediting_229388chr11_101972305_+SINEAluName=AluY
ADediting_229389chr11_101972332_+SINEAluName=AluY
ADediting_229390chr11_101972541_+SINEAluName=AluSg
ADediting_229391chr11_101972619_+SINEAluName=AluSg
ADediting_229392chr11_101972648_+SINEAluName=AluSg
ADediting_229393chr11_101972654_+SINEAluName=AluSg
ADediting_229394chr11_101972680_+SINEAluName=AluSg
ADediting_229395chr11_101972690_+SINEAluName=AluSg
ADediting_229396chr11_101972698_+SINEAluName=AluSg
ADediting_229397chr11_101972703_+SINEAluName=AluSg
ADediting_229398chr11_101973378_+LINEL1Name=L1PA10
ADediting_229399chr11_101973385_+LINEL1Name=L1PA10
ADediting_229400chr11_101973386_+LINEL1Name=L1PA10
ADediting_229401chr11_101973393_+LINEL1Name=L1PA10
ADediting_229402chr11_101973403_+LINEL1Name=L1PA10
ADediting_229403chr11_101973428_+LINEL1Name=L1PA10
ADediting_229404chr11_101973430_+LINEL1Name=L1PA10
ADediting_229405chr11_101973457_+LINEL1Name=L1PA10
ADediting_229406chr11_101975784_+LINEL1Name=L1PA15
ADediting_229407chr11_101975877_+LINEL1Name=L1PA15
ADediting_229408chr11_101975878_+LINEL1Name=L1PA15
ADediting_229409chr11_101977588_+SINEAluName=AluSc
ADediting_229410chr11_101979011_+SINEAluName=AluSq2
ADediting_229411chr11_101981500_+SINEAluName=AluSc8
ADediting_229412chr11_101981567_+SINEAluName=AluSc8
ADediting_229413chr11_101981570_+SINEAluName=AluSc8
ADediting_229414chr11_101986235_+SINEAluName=AluSx1
ADediting_229415chr11_101993956_+SINEAluName=AluSq2
ADediting_229416chr11_101993978_+SINEAluName=AluSq2
ADediting_229417chr11_101993979_+SINEAluName=AluSq2
ADediting_229418chr11_101993984_+SINEAluName=AluSq2
ADediting_229419chr11_101994024_+SINEAluName=AluSq2
ADediting_229420chr11_101994038_+SINEAluName=AluSq2
ADediting_229421chr11_101994048_+SINEAluName=AluSq2
ADediting_229422chr11_101994050_+SINEAluName=AluSq2
ADediting_229423chr11_101994058_+SINEAluName=AluSq2
ADediting_229424chr11_101994072_+SINEAluName=AluSq2
ADediting_229425chr11_101994124_+SINEAluName=AluSq2
ADediting_229426chr11_101994147_+SINEAluName=AluSq2
ADediting_229427chr11_101994156_+SINEAluName=AluSq2
ADediting_229428chr11_101994167_+SINEAluName=AluSq2
ADediting_229429chr11_101994184_+SINEAluName=AluSq2
ADediting_229430chr11_101994185_+SINEAluName=AluSq2
ADediting_229431chr11_101997091_+SINEAluName=AluSg
ADediting_229432chr11_101997107_+SINEAluName=AluSg
ADediting_229433chr11_101997118_+SINEAluName=AluSg
ADediting_229434chr11_101997131_+SINEAluName=AluSg
ADediting_229435chr11_101997137_+SINEAluName=AluSg
ADediting_229436chr11_101997138_+SINEAluName=AluSg
ADediting_229437chr11_101997155_+SINEAluName=AluSg
ADediting_229438chr11_101997164_+SINEAluName=AluSg
ADediting_229439chr11_101997167_+SINEAluName=AluSg
ADediting_229440chr11_101997177_+SINEAluName=AluSg
ADediting_229441chr11_101997183_+SINEAluName=AluSg
ADediting_229442chr11_101997195_+SINEAluName=AluSg
ADediting_229443chr11_101997204_+SINEAluName=AluSg
ADediting_229444chr11_101997221_+SINEAluName=AluSg
ADediting_229445chr11_101997235_+SINEAluName=AluSg
ADediting_229446chr11_101997247_+SINEAluName=AluSg
ADediting_229447chr11_101997297_+SINEAluName=AluSg
ADediting_229448chr11_101997310_+SINEAluName=AluSg
ADediting_229449chr11_101998356_+SINEAluName=AluJo
ADediting_229450chr11_101998375_+SINEAluName=AluJo
ADediting_229451chr11_101998464_+SINEAluName=AluJo
ADediting_229452chr11_101998509_+SINEAluName=AluJo
ADediting_229453chr11_101999792_+SINEAluName=AluJo
ADediting_229454chr11_101999864_+SINEAluName=AluJo
ADediting_229455chr11_101999914_+SINEAluName=AluJo
ADediting_229456chr11_101999928_+SINEAluName=AluJo
ADediting_229457chr11_101999949_+SINEAluName=AluJo
ADediting_229458chr11_102000069_+SINEAluName=AluSc
ADediting_229459chr11_102000104_+SINEAluName=AluSc
ADediting_229460chr11_102000421_+SINEAluName=AluSz6
ADediting_229461chr11_102000581_+SINEAluName=AluSz6
ADediting_229462chr11_102000612_+SINEAluName=AluSz6
ADediting_229463chr11_102000624_+SINEAluName=AluSz6
ADediting_1525172chr11_101985347_+SINEAluName=AluSx
ADediting_1525173chr11_101985387_+SINEAluName=AluSx
ADediting_1525174chr11_101985440_+SINEAluName=AluSx
ADediting_1525175chr11_101986083_+SINEAluName=AluSx1
ADediting_1525176chr11_101994192_+SINEAluName=AluSq2
ADediting_1525177chr11_101997077_+SINEAluName=AluSg
ADediting_1525178chr11_102000033_+SINEAluName=AluSc
ADediting_1608101chr11_101971120_+SINEAluName=AluJb
ADediting_1608102chr11_101973379_+LINEL1Name=L1PA10
ADediting_1608103chr11_101973451_+LINEL1Name=L1PA10
ADediting_1608104chr11_101981374_+SINEAluName=AluSc8
ADediting_1608105chr11_101981394_+SINEAluName=AluSc8
ADediting_1608106chr11_101981419_+SINEAluName=AluSc8
ADediting_1608107chr11_101981420_+SINEAluName=AluSc8
ADediting_1608108chr11_101981423_+SINEAluName=AluSc8
ADediting_1608109chr11_101981433_+SINEAluName=AluSc8
ADediting_1608110chr11_101981467_+SINEAluName=AluSc8
ADediting_1608111chr11_101981478_+SINEAluName=AluSc8
ADediting_1608112chr11_101981492_+SINEAluName=AluSc8

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RNA A-to-I editing events in the alternative splicing sites for CEP126

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CEP126

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
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check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
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Soverview

check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
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ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for CEP126

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CEP126

check buttonRNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
all structure

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_229451chr11_101998464_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-1207-3pchr111019984571019984637mer-m8101998446101998464145-13.53
ADediting_229451chr11_101998464_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-646chr111019984591019984657mer-m8101998447101998466148-21.85
ADediting_229454chr11_101999864_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-3064-3pchr111019998601019998678mer-1a101999845101999867152-17.46
ADediting_229456chr11_101999928_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-3672chr111019999261019999327mer-m8101999910101999933156-12.52
ADediting_229456chr11_101999928_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-6864-3pchr111019999261019999327mer-m8101999913101999933142-10.4
ADediting_229458chr11_102000069_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-1207-3pchr111020000621020000687mer-m8102000052102000069140-12.56
ADediting_229458chr11_102000069_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-4524a-5pchr111020000651020000717mer-m8102000051102000072141-11.02
ADediting_229458chr11_102000069_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-4524b-5pchr111020000651020000717mer-m8102000052102000072140-10.39
ADediting_229458chr11_102000069_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-646chr111020000641020000718mer-1a102000053102000071145-18.54
ADediting_229461chr11_102000581_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-1207-3pchr111020005741020005807mer-m8102000563102000581145-15.47
ADediting_229461chr11_102000581_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-4530chr111020005781020005847mer-m8102000569102000585145-26.32
ADediting_229461chr11_102000581_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-646chr111020005761020005827mer-m8102000565102000583145-16.94
ADediting_229462chr11_102000612_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-3136-3pchr111020006081020006147mer-m8102000594102000615156-16.78
ADediting_229462chr11_102000612_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-7155-3pchr111020006081020006147mer-m8102000594102000615148-26.15
ADediting_229463chr11_102000624_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-1281chr111020006171020006237mer-m8102000608102000624147-20.26

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_229450chr11_101998375_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-1200chr111019983711019983777mer-m8101998361101998378150-24.75
ADediting_229451chr11_101998464_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-562chr111019984601019984667mer-m8101998447101998467151-13.75
ADediting_229451chr11_101998464_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-5697chr111019984611019984677mer-m8101998447101998468146-18.02
ADediting_229452chr11_101998509_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-548ao-5pchr111019985061019985138mer-1a101998489101998513144-12.26
ADediting_229452chr11_101998509_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-548axchr111019985061019985138mer-1a101998492101998513146-11.83
ADediting_229456chr11_101999928_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-10399-5pchr111019999221019999287mer-m8101999907101999929142-7.29
ADediting_229456chr11_101999928_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-6504-3pchr111019999221019999287mer-m8101999908101999929148-9.54
ADediting_229457chr11_101999949_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-6878-3pchr111019999421019999498mer-1a101999929101999949142-13.53
ADediting_229458chr11_102000069_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-325chr111020000661020000727mer-m8102000051102000073153-21.1
ADediting_229459chr11_102000104_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-1343-3pchr111020001001020001067mer-m8102000084102000107146-24.15
ADediting_229459chr11_102000104_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-6742-3pchr111020000991020001068mer-1a102000087102000106145-14.93
ADediting_229459chr11_102000104_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-6783-3pchr111020001001020001067mer-m8102000087102000107146-17.13
ADediting_229462chr11_102000612_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-3155achr111020006101020006167mer-m8102000597102000617140-22.31
ADediting_229462chr11_102000612_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-3155bchr111020006101020006167mer-m8102000600102000617140-20.34
ADediting_229462chr11_102000612_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-371a-5pchr111020006061020006127mer-m8102000594102000613143-11.11
ADediting_229463chr11_102000624_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-6836-3pchr111020006171020006237mer-m8102000605102000624150-21.06

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1596844chr1_162342605_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-556-3pchr111020004921020004987mer-m8102000479102000499150-14.74
ADediting_843620chr2_207754818_+ENSG00000110318.15ENST00000263468.13CEP126-201hsa-miR-4775chr111019986201019986267mer-m8101998609101998627151-12.23

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CEP126

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000263468.13protein_codingSoverviewSoverview

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
ADediting_229449ENST00000263468.13chr11_101998356_+4342-1782.27-1782.57-1793.60
ADediting_229450ENST00000263468.13chr11_101998375_+4361-1781.87-1782.57-1793.60
ADediting_229451ENST00000263468.13chr11_101998464_+4450-1782.57-1782.57-1793.60
ADediting_229452ENST00000263468.13chr11_101998509_+4495-1782.97-1782.57-1793.60
ADediting_229453ENST00000263468.13chr11_101999792_+5778-1783.87-1782.57-1793.60
ADediting_229454ENST00000263468.13chr11_101999864_+5850-1782.27-1782.57-1793.60
ADediting_229455ENST00000263468.13chr11_101999914_+5900-1781.57-1782.57-1793.60
ADediting_229456ENST00000263468.13chr11_101999928_+5914-1782.77-1782.57-1793.60
ADediting_229457ENST00000263468.13chr11_101999949_+5935-1784.17-1782.57-1793.60
ADediting_1525178ENST00000263468.13chr11_102000033_+6019-1782.27-1782.57-1793.60
ADediting_229458ENST00000263468.13chr11_102000069_+6055-1782.37-1782.57-1793.60
ADediting_229459ENST00000263468.13chr11_102000104_+6090-1782.27-1782.57-1793.60
ADediting_229460ENST00000263468.13chr11_102000421_+6407-1786.37-1782.57-1793.60
ADediting_229461ENST00000263468.13chr11_102000581_+6567-1785.47-1782.57-1793.60
ADediting_229462ENST00000263468.13chr11_102000612_+6598-1784.07-1782.57-1793.60
ADediting_229463ENST00000263468.13chr11_102000624_+6610-1782.27-1782.57-1793.60

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CEP126

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFCADediting_229419chr11_101994024_+1.006019416916e-050.2478811058569480.006525111814343730.1541923931525373.24842006494268e-080.307541637579294
DLPFCADediting_229431chr11_101997091_+6.02954622127985e-080.3017347459439151.96764015227667e-090.3324062876438980.002048235559206860.174470845624826
DLPFCADediting_229448chr11_101997310_+1.3276174763487e-080.31572575436523.29435587098101e-090.3280020782687180.4130853667611230.0466494596252502
CERADediting_229448chr11_101997310_+0.06506046349617920.1510289503522240.0001261805568017160.3079617626800920.54254046821620.0501106126979874
CERADediting_229459chr11_102000104_+0.2760631693221570.08950338991291870.0001767307032217830.3015613594556160.002740613351391680.242933083142196

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC1.48693459606379e-280.5739228416619633.65675664091654e-270.5615964923079022.02676412763676e-130.401239124331756
AC5.01353716417912e-420.7248870320966387.39579210595911e-560.7954085244252160.05711282375870470.120486410273713
PCC1.2284060550202e-340.7418431645478964.90174911225024e-430.7957905850605520.001057601672094940.235163480286744
CER2.42779053755661e-220.6878002533636044.05799028306652e-160.6013408698825040.06663761694246120.150160378006225
TCX7.37388209717719e-250.7159009710769031.19706071873413e-220.6914075771822090.896002860056111-0.0107623420491834
FP1.00680262727168e-330.7523031032290914.54642227284268e-260.6857504859445570.005125129379596080.208949765371475
IFG1.32952598423109e-050.7542788281070219.46825574472764e-060.7623229682442280.1614701168991580.288805575866944
PG5.12320113777351e-610.8787808183541581.28834456701193e-390.7819116119847750.84357379523691-0.0145659426555071
STG1.83770528126125e-150.7345335413745383.67666075343837e-150.7292216999461360.1756693106273860.149163400589455

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Relation with AD stages for CEP126

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.
CER7.82915885358646e-060.415344432474106
TCX0.001336654303443010.307642350161988

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RelatedDrugs for CEP126

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CEP126

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource