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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for SRGAP1 |
 Gene summary |
| Gene information | Gene symbol | SRGAP1 | Gene ID | 57522 |
| Gene name | SLIT-ROBO Rho GTPase activating protein 1 | |
| Synonyms | ARHGAP13|NMTC2 | |
| Cytomap | 12q14.2 | |
| Type of gene | protein-coding | |
| Description | SLIT-ROBO Rho GTPase-activating protein 1rho GTPase-activating protein 13 | |
| Modification date | 20200313 | |
| UniProtAcc | Q7Z6B7, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for SRGAP1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_364670(63847051, +), ADediting_364671(63847248, +), ADediting_364672(63847255, +), ADediting_364673(63847471, +), ADediting_364674(63847476, +), ADediting_364675(63847480, +), ADediting_364676(63847570, +), ADediting_364677(63847581, +), ADediting_364678(63847585, +), ADediting_364679(63847586, +), ADediting_364680(63847587, +), ADediting_364681(63847588, +), ADediting_364682(63847590, +), ADediting_364683(63847593, +), ADediting_364684(63847599, +), ADediting_364685(63847631, +), ADediting_364686(63847635, +), ADediting_364687(63847652, +), ADediting_364688(63847678, +), ADediting_364689(63847681, +), ADediting_364690(63848286, +), ADediting_364691(63848589, +), ADediting_364692(63848624, +), ADediting_364693(63848645, +), ADediting_364694(63848681, +), ADediting_364695(63848687, +), ADediting_364696(63850517, +), ADediting_364697(63850530, +), ADediting_364698(63850531, +), ADediting_364699(63850618, +), ADediting_364700(63850634, +), ADediting_364701(63850890, +), ADediting_364702(63850946, +), ADediting_364703(63850970, +), ADediting_364704(63851006, +), ADediting_364705(63851009, +), ADediting_364706(63851022, +), ADediting_364707(63851025, +), ADediting_364708(63851071, +), ADediting_364709(63851077, +), ADediting_364710(63851329, +), ADediting_364711(63852209, +), ADediting_364712(63852258, +), ADediting_364713(63852276, +), ADediting_364714(63855584, +), ADediting_364715(63855585, +), ADediting_364716(63855595, +), ADediting_364717(63855645, +), ADediting_364718(63855686, +), ADediting_364719(63855749, +), ADediting_364720(63855762, +), ADediting_364721(63856108, +), ADediting_364722(63856160, +), ADediting_364723(63856209, +), ADediting_364724(63857581, +), ADediting_364725(63861393, +), ADediting_364726(63861412, +), ADediting_364727(63861418, +), ADediting_364728(63861429, +), ADediting_364729(63861433, +), ADediting_364730(63861567, +), ADediting_364731(63861907, +), ADediting_364732(63861974, +), ADediting_364733(63862001, +), ADediting_364734(63862006, +), ADediting_364735(63862014, +), ADediting_364736(63862046, +), ADediting_364737(63862076, +), ADediting_364738(63863334, +), ADediting_364739(63863353, +), ADediting_364740(63863376, +), ADediting_364741(63863377, +), ADediting_364742(63863414, +), ADediting_364743(63863534, +), ADediting_364744(63865201, +), ADediting_364745(63865202, +), ADediting_364746(63865283, +), ADediting_364747(63865293, +), ADediting_364748(63865309, +), ADediting_364749(63865346, +), ADediting_364750(63865349, +), ADediting_364751(63866981, +), ADediting_364752(63870607, +), ADediting_364753(63870640, +), ADediting_364754(63873262, +), ADediting_364755(63873275, +), ADediting_364756(63873276, +), ADediting_364757(63873281, +), ADediting_364758(63873329, +), ADediting_364759(63873375, +), ADediting_364760(63873412, +), ADediting_364761(63873413, +), ADediting_364762(63873422, +), ADediting_364763(63873439, +), ADediting_364764(63873468, +), ADediting_364765(63873722, +), ADediting_364766(63873877, +), ADediting_364767(63873905, +), ADediting_364768(63873921, +), ADediting_364769(63873925, +), ADediting_364770(63873952, +), ADediting_364771(63873961, +), ADediting_364772(63873990, +), ADediting_364773(63873993, +), ADediting_364774(63873998, +), ADediting_364775(63874333, +), ADediting_364776(63874343, +), ADediting_364777(63874356, +), ADediting_364778(63874477, +), ADediting_364779(63875049, +), ADediting_364780(63877022, +), ADediting_364781(63877046, +), ADediting_364782(63877104, +), ADediting_364783(63877105, +), ADediting_364784(63877128, +), ADediting_364785(63877131, +), ADediting_364786(63877187, +), ADediting_364787(63886125, +), ADediting_364788(63886130, +), ADediting_364789(63886236, +), ADediting_364790(63886282, +), ADediting_364791(63886283, +), ADediting_364792(63886922, +), ADediting_364793(63886930, +), ADediting_364794(63891725, +), ADediting_364795(63891740, +), ADediting_364796(63891772, +), ADediting_364797(63891801, +), ADediting_364798(63891805, +), ADediting_364799(63891808, +), ADediting_364800(63891837, +), ADediting_364801(63891840, +), ADediting_364802(63891856, +), ADediting_364803(63891860, +), ADediting_364804(63891864, +), ADediting_364805(63891866, +), ADediting_364806(63891907, +), ADediting_364807(63891911, +), ADediting_364808(63891918, +), ADediting_364809(63899200, +), ADediting_364810(63900306, +), ADediting_364811(63900335, +), ADediting_364812(63900634, +), ADediting_364813(63900635, +), ADediting_364814(63904673, +), ADediting_364815(63911045, +), ADediting_364816(63911080, +), ADediting_364817(63911133, +), ADediting_364818(63916145, +), ADediting_364819(63923903, +), ADediting_364820(63924030, +), ADediting_364821(63954584, +), ADediting_364822(64000399, +), ADediting_364823(64000499, +), ADediting_364824(64000506, +), ADediting_364825(64003186, +), ADediting_364826(64003199, +), ADediting_364827(64003204, +), ADediting_364828(64003309, +), ADediting_364829(64003315, +), ADediting_364830(64003361, +), ADediting_364831(64005405, +), ADediting_364832(64005433, +), ADediting_364833(64017421, +), ADediting_364834(64017454, +), ADediting_364835(64017534, +), ADediting_364836(64018169, +), ADediting_364837(64018192, +), ADediting_364838(64018193, +), ADediting_364839(64018206, +), ADediting_364840(64018311, +), ADediting_364841(64018312, +), ADediting_364842(64018343, +), ADediting_364843(64143668, +), ADediting_364844(64144945, +), ADediting_364845(64145083, +), ADediting_364846(64145105, +), ADediting_364847(64148351, +), ADediting_364848(64148381, +), ADediting_364849(64148382, +), ADediting_364850(64150705, +), ADediting_1533672(64145040, +), ADediting_1614515(63848167, +), ADediting_1614516(63850883, +), ADediting_1614517(63861473, +), ADediting_1614518(63891836, +), ADediting_1614519(63903774, +), |
Top |
RNA editing positional annotations for SRGAP1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_364670 | chr12_63847051_+ | intronic |
| ADediting_364671 | chr12_63847248_+ | intronic |
| ADediting_364672 | chr12_63847255_+ | intronic |
| ADediting_364673 | chr12_63847471_+ | intronic |
| ADediting_364674 | chr12_63847476_+ | intronic |
| ADediting_364675 | chr12_63847480_+ | intronic |
| ADediting_364676 | chr12_63847570_+ | intronic |
| ADediting_364677 | chr12_63847581_+ | intronic |
| ADediting_364678 | chr12_63847585_+ | intronic |
| ADediting_364679 | chr12_63847586_+ | intronic |
| ADediting_364680 | chr12_63847587_+ | intronic |
| ADediting_364681 | chr12_63847588_+ | intronic |
| ADediting_364682 | chr12_63847590_+ | intronic |
| ADediting_364683 | chr12_63847593_+ | intronic |
| ADediting_364684 | chr12_63847599_+ | intronic |
| ADediting_364685 | chr12_63847631_+ | intronic |
| ADediting_364686 | chr12_63847635_+ | intronic |
| ADediting_364687 | chr12_63847652_+ | intronic |
| ADediting_364688 | chr12_63847678_+ | intronic |
| ADediting_364689 | chr12_63847681_+ | intronic |
| ADediting_364690 | chr12_63848286_+ | intronic |
| ADediting_364691 | chr12_63848589_+ | intronic |
| ADediting_364692 | chr12_63848624_+ | intronic |
| ADediting_364693 | chr12_63848645_+ | intronic |
| ADediting_364694 | chr12_63848681_+ | intronic |
| ADediting_364695 | chr12_63848687_+ | intronic |
| ADediting_364696 | chr12_63850517_+ | intronic |
| ADediting_364697 | chr12_63850530_+ | intronic |
| ADediting_364698 | chr12_63850531_+ | intronic |
| ADediting_364699 | chr12_63850618_+ | intronic |
| ADediting_364700 | chr12_63850634_+ | intronic |
| ADediting_364701 | chr12_63850890_+ | intronic |
| ADediting_364702 | chr12_63850946_+ | intronic |
| ADediting_364703 | chr12_63850970_+ | intronic |
| ADediting_364704 | chr12_63851006_+ | intronic |
| ADediting_364705 | chr12_63851009_+ | intronic |
| ADediting_364706 | chr12_63851022_+ | intronic |
| ADediting_364707 | chr12_63851025_+ | intronic |
| ADediting_364708 | chr12_63851071_+ | intronic |
| ADediting_364709 | chr12_63851077_+ | intronic |
| ADediting_364710 | chr12_63851329_+ | intronic |
| ADediting_364711 | chr12_63852209_+ | intronic |
| ADediting_364712 | chr12_63852258_+ | intronic |
| ADediting_364713 | chr12_63852276_+ | intronic |
| ADediting_364714 | chr12_63855584_+ | intronic |
| ADediting_364715 | chr12_63855585_+ | intronic |
| ADediting_364716 | chr12_63855595_+ | intronic |
| ADediting_364717 | chr12_63855645_+ | intronic |
| ADediting_364718 | chr12_63855686_+ | intronic |
| ADediting_364719 | chr12_63855749_+ | intronic |
| ADediting_364720 | chr12_63855762_+ | intronic |
| ADediting_364721 | chr12_63856108_+ | intronic |
| ADediting_364722 | chr12_63856160_+ | intronic |
| ADediting_364723 | chr12_63856209_+ | intronic |
| ADediting_364724 | chr12_63857581_+ | intronic |
| ADediting_364725 | chr12_63861393_+ | intronic |
| ADediting_364726 | chr12_63861412_+ | intronic |
| ADediting_364727 | chr12_63861418_+ | intronic |
| ADediting_364728 | chr12_63861429_+ | intronic |
| ADediting_364729 | chr12_63861433_+ | intronic |
| ADediting_364730 | chr12_63861567_+ | intronic |
| ADediting_364731 | chr12_63861907_+ | intronic |
| ADediting_364732 | chr12_63861974_+ | intronic |
| ADediting_364733 | chr12_63862001_+ | intronic |
| ADediting_364734 | chr12_63862006_+ | intronic |
| ADediting_364735 | chr12_63862014_+ | intronic |
| ADediting_364736 | chr12_63862046_+ | intronic |
| ADediting_364737 | chr12_63862076_+ | intronic |
| ADediting_364738 | chr12_63863334_+ | intronic |
| ADediting_364739 | chr12_63863353_+ | intronic |
| ADediting_364740 | chr12_63863376_+ | intronic |
| ADediting_364741 | chr12_63863377_+ | intronic |
| ADediting_364742 | chr12_63863414_+ | intronic |
| ADediting_364743 | chr12_63863534_+ | intronic |
| ADediting_364744 | chr12_63865201_+ | intronic |
| ADediting_364745 | chr12_63865202_+ | intronic |
| ADediting_364746 | chr12_63865283_+ | intronic |
| ADediting_364747 | chr12_63865293_+ | intronic |
| ADediting_364748 | chr12_63865309_+ | intronic |
| ADediting_364749 | chr12_63865346_+ | intronic |
| ADediting_364750 | chr12_63865349_+ | intronic |
| ADediting_364751 | chr12_63866981_+ | intronic |
| ADediting_364752 | chr12_63870607_+ | intronic |
| ADediting_364753 | chr12_63870640_+ | intronic |
| ADediting_364754 | chr12_63873262_+ | intronic |
| ADediting_364755 | chr12_63873275_+ | intronic |
| ADediting_364756 | chr12_63873276_+ | intronic |
| ADediting_364757 | chr12_63873281_+ | intronic |
| ADediting_364758 | chr12_63873329_+ | intronic |
| ADediting_364759 | chr12_63873375_+ | intronic |
| ADediting_364760 | chr12_63873412_+ | intronic |
| ADediting_364761 | chr12_63873413_+ | intronic |
| ADediting_364762 | chr12_63873422_+ | intronic |
| ADediting_364763 | chr12_63873439_+ | intronic |
| ADediting_364764 | chr12_63873468_+ | intronic |
| ADediting_364765 | chr12_63873722_+ | intronic |
| ADediting_364766 | chr12_63873877_+ | intronic |
| ADediting_364767 | chr12_63873905_+ | intronic |
| ADediting_364768 | chr12_63873921_+ | intronic |
| ADediting_364769 | chr12_63873925_+ | intronic |
| ADediting_364770 | chr12_63873952_+ | intronic |
| ADediting_364771 | chr12_63873961_+ | intronic |
| ADediting_364772 | chr12_63873990_+ | intronic |
| ADediting_364773 | chr12_63873993_+ | intronic |
| ADediting_364774 | chr12_63873998_+ | intronic |
| ADediting_364775 | chr12_63874333_+ | intronic |
| ADediting_364776 | chr12_63874343_+ | intronic |
| ADediting_364777 | chr12_63874356_+ | intronic |
| ADediting_364778 | chr12_63874477_+ | intronic |
| ADediting_364779 | chr12_63875049_+ | intronic |
| ADediting_364780 | chr12_63877022_+ | intronic |
| ADediting_364781 | chr12_63877046_+ | intronic |
| ADediting_364782 | chr12_63877104_+ | intronic |
| ADediting_364783 | chr12_63877105_+ | intronic |
| ADediting_364784 | chr12_63877128_+ | intronic |
| ADediting_364785 | chr12_63877131_+ | intronic |
| ADediting_364786 | chr12_63877187_+ | intronic |
| ADediting_364787 | chr12_63886125_+ | intronic |
| ADediting_364788 | chr12_63886130_+ | intronic |
| ADediting_364789 | chr12_63886236_+ | intronic |
| ADediting_364790 | chr12_63886282_+ | intronic |
| ADediting_364791 | chr12_63886283_+ | intronic |
| ADediting_364792 | chr12_63886922_+ | intronic |
| ADediting_364793 | chr12_63886930_+ | intronic |
| ADediting_364794 | chr12_63891725_+ | intronic |
| ADediting_364795 | chr12_63891740_+ | intronic |
| ADediting_364796 | chr12_63891772_+ | intronic |
| ADediting_364797 | chr12_63891801_+ | intronic |
| ADediting_364798 | chr12_63891805_+ | intronic |
| ADediting_364799 | chr12_63891808_+ | intronic |
| ADediting_364800 | chr12_63891837_+ | intronic |
| ADediting_364801 | chr12_63891840_+ | intronic |
| ADediting_364802 | chr12_63891856_+ | intronic |
| ADediting_364803 | chr12_63891860_+ | intronic |
| ADediting_364804 | chr12_63891864_+ | intronic |
| ADediting_364805 | chr12_63891866_+ | intronic |
| ADediting_364806 | chr12_63891907_+ | intronic |
| ADediting_364807 | chr12_63891911_+ | intronic |
| ADediting_364808 | chr12_63891918_+ | intronic |
| ADediting_364809 | chr12_63899200_+ | intronic |
| ADediting_364810 | chr12_63900306_+ | intronic |
| ADediting_364811 | chr12_63900335_+ | intronic |
| ADediting_364812 | chr12_63900634_+ | intronic |
| ADediting_364813 | chr12_63900635_+ | intronic |
| ADediting_364814 | chr12_63904673_+ | intronic |
| ADediting_364815 | chr12_63911045_+ | intronic |
| ADediting_364816 | chr12_63911080_+ | intronic |
| ADediting_364817 | chr12_63911133_+ | intronic |
| ADediting_364818 | chr12_63916145_+ | intronic |
| ADediting_364819 | chr12_63923903_+ | intronic |
| ADediting_364820 | chr12_63924030_+ | intronic |
| ADediting_364821 | chr12_63954584_+ | intronic |
| ADediting_364822 | chr12_64000399_+ | intronic |
| ADediting_364823 | chr12_64000499_+ | intronic |
| ADediting_364824 | chr12_64000506_+ | intronic |
| ADediting_364825 | chr12_64003186_+ | intronic |
| ADediting_364826 | chr12_64003199_+ | intronic |
| ADediting_364827 | chr12_64003204_+ | intronic |
| ADediting_364828 | chr12_64003309_+ | intronic |
| ADediting_364829 | chr12_64003315_+ | intronic |
| ADediting_364830 | chr12_64003361_+ | intronic |
| ADediting_364831 | chr12_64005405_+ | intronic |
| ADediting_364832 | chr12_64005433_+ | intronic |
| ADediting_364833 | chr12_64017421_+ | intronic |
| ADediting_364834 | chr12_64017454_+ | intronic |
| ADediting_364835 | chr12_64017534_+ | intronic |
| ADediting_364836 | chr12_64018169_+ | intronic |
| ADediting_364837 | chr12_64018192_+ | intronic |
| ADediting_364838 | chr12_64018193_+ | intronic |
| ADediting_364839 | chr12_64018206_+ | intronic |
| ADediting_364840 | chr12_64018311_+ | intronic |
| ADediting_364841 | chr12_64018312_+ | intronic |
| ADediting_364842 | chr12_64018343_+ | intronic |
| ADediting_364843 | chr12_64143668_+ | UTR3 |
| ADediting_364844 | chr12_64144945_+ | UTR3 |
| ADediting_364845 | chr12_64145083_+ | UTR3 |
| ADediting_364846 | chr12_64145105_+ | UTR3 |
| ADediting_364847 | chr12_64148351_+ | UTR3 |
| ADediting_364848 | chr12_64148381_+ | UTR3 |
| ADediting_364849 | chr12_64148382_+ | UTR3 |
| ADediting_364850 | chr12_64150705_+ | UTR3 |
| ADediting_1533672 | chr12_64145040_+ | UTR3 |
| ADediting_1614515 | chr12_63848167_+ | intronic |
| ADediting_1614516 | chr12_63850883_+ | intronic |
| ADediting_1614517 | chr12_63861473_+ | intronic |
| ADediting_1614518 | chr12_63891836_+ | intronic |
| ADediting_1614519 | chr12_63903774_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_364670 | chr12_63847051_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364671 | chr12_63847248_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364672 | chr12_63847255_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364674 | chr12_63847476_+ | SINE | Alu | Name=AluSz |
| ADediting_364675 | chr12_63847480_+ | SINE | Alu | Name=AluSz |
| ADediting_364676 | chr12_63847570_+ | SINE | Alu | Name=AluSz |
| ADediting_364677 | chr12_63847581_+ | SINE | Alu | Name=AluSz |
| ADediting_364678 | chr12_63847585_+ | SINE | Alu | Name=AluSz |
| ADediting_364679 | chr12_63847586_+ | SINE | Alu | Name=AluSz |
| ADediting_364680 | chr12_63847587_+ | SINE | Alu | Name=AluSz |
| ADediting_364681 | chr12_63847588_+ | SINE | Alu | Name=AluSz |
| ADediting_364682 | chr12_63847590_+ | SINE | Alu | Name=AluSz |
| ADediting_364683 | chr12_63847593_+ | SINE | Alu | Name=AluSz |
| ADediting_364684 | chr12_63847599_+ | SINE | Alu | Name=AluSz |
| ADediting_364685 | chr12_63847631_+ | SINE | Alu | Name=AluSz |
| ADediting_364686 | chr12_63847635_+ | SINE | Alu | Name=AluSz |
| ADediting_364687 | chr12_63847652_+ | SINE | Alu | Name=AluSz |
| ADediting_364688 | chr12_63847678_+ | SINE | Alu | Name=AluSz |
| ADediting_364689 | chr12_63847681_+ | SINE | Alu | Name=AluSz |
| ADediting_364690 | chr12_63848286_+ | SINE | Alu | Name=AluSx |
| ADediting_364691 | chr12_63848589_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364692 | chr12_63848624_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364693 | chr12_63848645_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364694 | chr12_63848681_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364695 | chr12_63848687_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364696 | chr12_63850517_+ | SINE | Alu | Name=AluJb |
| ADediting_364697 | chr12_63850530_+ | SINE | Alu | Name=AluJb |
| ADediting_364698 | chr12_63850531_+ | SINE | Alu | Name=AluJb |
| ADediting_364699 | chr12_63850618_+ | SINE | Alu | Name=AluJb |
| ADediting_364700 | chr12_63850634_+ | SINE | Alu | Name=AluJb |
| ADediting_364701 | chr12_63850890_+ | SINE | Alu | Name=AluSz |
| ADediting_364702 | chr12_63850946_+ | SINE | Alu | Name=AluSz |
| ADediting_364703 | chr12_63850970_+ | SINE | Alu | Name=AluSz |
| ADediting_364704 | chr12_63851006_+ | SINE | Alu | Name=AluSz |
| ADediting_364705 | chr12_63851009_+ | SINE | Alu | Name=AluSz |
| ADediting_364706 | chr12_63851022_+ | SINE | Alu | Name=AluSz |
| ADediting_364707 | chr12_63851025_+ | SINE | Alu | Name=AluSz |
| ADediting_364708 | chr12_63851071_+ | SINE | Alu | Name=AluSz |
| ADediting_364709 | chr12_63851077_+ | SINE | Alu | Name=AluSz |
| ADediting_364710 | chr12_63851329_+ | SINE | Alu | Name=AluJr |
| ADediting_364711 | chr12_63852209_+ | SINE | Alu | Name=AluJb |
| ADediting_364712 | chr12_63852258_+ | SINE | Alu | Name=AluJb |
| ADediting_364713 | chr12_63852276_+ | SINE | Alu | Name=AluJb |
| ADediting_364714 | chr12_63855584_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364715 | chr12_63855585_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364716 | chr12_63855595_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364717 | chr12_63855645_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364718 | chr12_63855686_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364719 | chr12_63855749_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364720 | chr12_63855762_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364721 | chr12_63856108_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364722 | chr12_63856160_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364723 | chr12_63856209_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364724 | chr12_63857581_+ | SINE | Alu | Name=AluSz |
| ADediting_364725 | chr12_63861393_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364726 | chr12_63861412_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364727 | chr12_63861418_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364728 | chr12_63861429_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364729 | chr12_63861433_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364730 | chr12_63861567_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364731 | chr12_63861907_+ | SINE | Alu | Name=AluSx |
| ADediting_364732 | chr12_63861974_+ | SINE | Alu | Name=AluSx |
| ADediting_364733 | chr12_63862001_+ | SINE | Alu | Name=AluSx |
| ADediting_364734 | chr12_63862006_+ | SINE | Alu | Name=AluSx |
| ADediting_364735 | chr12_63862014_+ | SINE | Alu | Name=AluSx |
| ADediting_364736 | chr12_63862046_+ | SINE | Alu | Name=AluSx |
| ADediting_364737 | chr12_63862076_+ | SINE | Alu | Name=AluSx |
| ADediting_364738 | chr12_63863334_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364739 | chr12_63863353_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364740 | chr12_63863376_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364741 | chr12_63863377_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364742 | chr12_63863414_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364743 | chr12_63863534_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364744 | chr12_63865201_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364745 | chr12_63865202_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364746 | chr12_63865283_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364747 | chr12_63865293_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364748 | chr12_63865309_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364749 | chr12_63865346_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364750 | chr12_63865349_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364751 | chr12_63866981_+ | SINE | Alu | Name=AluJb |
| ADediting_364752 | chr12_63870607_+ | SINE | Alu | Name=AluSz |
| ADediting_364753 | chr12_63870640_+ | SINE | Alu | Name=AluSz |
| ADediting_364754 | chr12_63873262_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364755 | chr12_63873275_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364756 | chr12_63873276_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364757 | chr12_63873281_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364758 | chr12_63873329_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364759 | chr12_63873375_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364760 | chr12_63873412_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364761 | chr12_63873413_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364762 | chr12_63873422_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364763 | chr12_63873439_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364764 | chr12_63873468_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364765 | chr12_63873722_+ | SINE | Alu | Name=AluSc8 |
| ADediting_364766 | chr12_63873877_+ | SINE | Alu | Name=AluJb |
| ADediting_364767 | chr12_63873905_+ | SINE | Alu | Name=AluJb |
| ADediting_364768 | chr12_63873921_+ | SINE | Alu | Name=AluJb |
| ADediting_364769 | chr12_63873925_+ | SINE | Alu | Name=AluJb |
| ADediting_364770 | chr12_63873952_+ | SINE | Alu | Name=AluJb |
| ADediting_364771 | chr12_63873961_+ | SINE | Alu | Name=AluJb |
| ADediting_364772 | chr12_63873990_+ | SINE | Alu | Name=AluJb |
| ADediting_364773 | chr12_63873993_+ | SINE | Alu | Name=AluJb |
| ADediting_364774 | chr12_63873998_+ | SINE | Alu | Name=AluJb |
| ADediting_364775 | chr12_63874333_+ | SINE | Alu | Name=AluY |
| ADediting_364776 | chr12_63874343_+ | SINE | Alu | Name=AluY |
| ADediting_364777 | chr12_63874356_+ | SINE | Alu | Name=AluY |
| ADediting_364778 | chr12_63874477_+ | SINE | Alu | Name=AluY |
| ADediting_364779 | chr12_63875049_+ | SINE | Alu | Name=AluJo |
| ADediting_364780 | chr12_63877022_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364781 | chr12_63877046_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364782 | chr12_63877104_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364783 | chr12_63877105_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364784 | chr12_63877128_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364785 | chr12_63877131_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364786 | chr12_63877187_+ | SINE | Alu | Name=AluSq2 |
| ADediting_364787 | chr12_63886125_+ | SINE | Alu | Name=AluSz |
| ADediting_364788 | chr12_63886130_+ | SINE | Alu | Name=AluSz |
| ADediting_364789 | chr12_63886236_+ | SINE | Alu | Name=AluSz |
| ADediting_364790 | chr12_63886282_+ | SINE | Alu | Name=AluSz |
| ADediting_364791 | chr12_63886283_+ | SINE | Alu | Name=AluSz |
| ADediting_364792 | chr12_63886922_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364793 | chr12_63886930_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364794 | chr12_63891725_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364795 | chr12_63891740_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364796 | chr12_63891772_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364797 | chr12_63891801_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364798 | chr12_63891805_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364799 | chr12_63891808_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364800 | chr12_63891837_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364801 | chr12_63891840_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364802 | chr12_63891856_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364803 | chr12_63891860_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364804 | chr12_63891864_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364805 | chr12_63891866_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364806 | chr12_63891907_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364807 | chr12_63891911_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364808 | chr12_63891918_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364809 | chr12_63899200_+ | SINE | Alu | Name=AluJb |
| ADediting_364810 | chr12_63900306_+ | SINE | Alu | Name=AluSc8 |
| ADediting_364811 | chr12_63900335_+ | SINE | Alu | Name=AluSc8 |
| ADediting_364812 | chr12_63900634_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364813 | chr12_63900635_+ | SINE | Alu | Name=AluSz6 |
| ADediting_364814 | chr12_63904673_+ | SINE | Alu | Name=AluJr |
| ADediting_364815 | chr12_63911045_+ | SINE | Alu | Name=AluY |
| ADediting_364816 | chr12_63911080_+ | SINE | Alu | Name=AluY |
| ADediting_364817 | chr12_63911133_+ | SINE | Alu | Name=AluY |
| ADediting_364818 | chr12_63916145_+ | SINE | Alu | Name=AluJb |
| ADediting_364819 | chr12_63923903_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364820 | chr12_63924030_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364821 | chr12_63954584_+ | SINE | Alu | Name=AluY |
| ADediting_364822 | chr12_64000399_+ | SINE | Alu | Name=AluJr |
| ADediting_364823 | chr12_64000499_+ | SINE | Alu | Name=AluJr |
| ADediting_364824 | chr12_64000506_+ | SINE | Alu | Name=AluJr |
| ADediting_364825 | chr12_64003186_+ | SINE | Alu | Name=AluJb |
| ADediting_364826 | chr12_64003199_+ | SINE | Alu | Name=AluJb |
| ADediting_364827 | chr12_64003204_+ | SINE | Alu | Name=AluJb |
| ADediting_364828 | chr12_64003309_+ | SINE | Alu | Name=AluJb |
| ADediting_364829 | chr12_64003315_+ | SINE | Alu | Name=AluJb |
| ADediting_364830 | chr12_64003361_+ | SINE | Alu | Name=AluJb |
| ADediting_364831 | chr12_64005405_+ | SINE | Alu | Name=AluJr |
| ADediting_364832 | chr12_64005433_+ | SINE | Alu | Name=AluJr |
| ADediting_364833 | chr12_64017421_+ | SINE | Alu | Name=AluSz |
| ADediting_364834 | chr12_64017454_+ | SINE | Alu | Name=AluSz |
| ADediting_364835 | chr12_64017534_+ | SINE | Alu | Name=AluSz |
| ADediting_364836 | chr12_64018169_+ | SINE | Alu | Name=AluSx |
| ADediting_364837 | chr12_64018192_+ | SINE | Alu | Name=AluSx |
| ADediting_364838 | chr12_64018193_+ | SINE | Alu | Name=AluSx |
| ADediting_364839 | chr12_64018206_+ | SINE | Alu | Name=AluSx |
| ADediting_364840 | chr12_64018311_+ | SINE | Alu | Name=AluSx |
| ADediting_364841 | chr12_64018312_+ | SINE | Alu | Name=AluSx |
| ADediting_364842 | chr12_64018343_+ | SINE | Alu | Name=AluSx |
| ADediting_364843 | chr12_64143668_+ | SINE | Alu | Name=FLAM_A |
| ADediting_364844 | chr12_64144945_+ | SINE | Alu | Name=AluSx |
| ADediting_364845 | chr12_64145083_+ | SINE | Alu | Name=AluSx |
| ADediting_364846 | chr12_64145105_+ | SINE | Alu | Name=AluSx |
| ADediting_364847 | chr12_64148351_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364848 | chr12_64148381_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364849 | chr12_64148382_+ | SINE | Alu | Name=AluSx1 |
| ADediting_364850 | chr12_64150705_+ | SINE | Alu | Name=AluJo |
| ADediting_1533672 | chr12_64145040_+ | SINE | Alu | Name=AluSx |
| ADediting_1614515 | chr12_63848167_+ | SINE | Alu | Name=AluSx |
| ADediting_1614516 | chr12_63850883_+ | SINE | Alu | Name=AluSz |
| ADediting_1614517 | chr12_63861473_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1614518 | chr12_63891836_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1614519 | chr12_63903774_+ | SINE | Alu | Name=AluSg |
Top |
RNA A-to-I editing events in the alternative splicing sites for SRGAP1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for SRGAP1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for SRGAP1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for SRGAP1 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1533672 | chr12_64145040_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-3940-3p | chr12 | 64145037 | 64145043 | 7mer-m8 | 64145026 | 64145044 | 144 | -24.53 |
| ADediting_1533672 | chr12_64145040_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-3940-3p | chr12 | 64145037 | 64145043 | 7mer-m8 | 64145026 | 64145044 | 144 | -24.53 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-6089 | chr12 | 64145081 | 64145087 | 7mer-m8 | 64145066 | 64145088 | 164 | -39.53 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-6089 | chr12 | 64145081 | 64145087 | 7mer-m8 | 64145066 | 64145088 | 164 | -39.53 |
| ADediting_364847 | chr12_64148351_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4537 | chr12 | 64148348 | 64148355 | 8mer-1a | 64148334 | 64148355 | 147 | -25.03 |
| ADediting_364849 | chr12_64148382_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-3140-5p | chr12 | 64148376 | 64148382 | 7mer-m8 | 64148365 | 64148383 | 146 | -13.26 |
| ADediting_364849 | chr12_64148382_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5187-3p | chr12 | 64148375 | 64148381 | 7mer-m8 | 64148362 | 64148382 | 145 | -11.7 |
| ADediting_364849 | chr12_64148382_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-6078 | chr12 | 64148378 | 64148385 | 8mer-1a | 64148366 | 64148385 | 148 | -21.57 |
| ADediting_364850 | chr12_64150705_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-18a-3p | chr12 | 64150703 | 64150709 | 7mer-m8 | 64150688 | 64150710 | 144 | -19.09 |
| ADediting_364850 | chr12_64150705_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-3176 | chr12 | 64150698 | 64150704 | 7mer-m8 | 64150687 | 64150705 | 140 | -14.33 |
| ADediting_364850 | chr12_64150705_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-3922-3p | chr12 | 64150698 | 64150704 | 7mer-m8 | 64150684 | 64150705 | 141 | -15.95 |
| ADediting_364850 | chr12_64150705_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-874-3p | chr12 | 64150702 | 64150708 | 7mer-m8 | 64150688 | 64150709 | 155 | -30.7 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1533672 | chr12_64145040_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-3190-5p | chr12 | 64145034 | 64145040 | 7mer-m8 | 64145017 | 64145041 | 148 | -28.85 |
| ADediting_1533672 | chr12_64145040_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-548s | chr12 | 64145033 | 64145039 | 7mer-m8 | 64145019 | 64145040 | 147 | -12.76 |
| ADediting_1533672 | chr12_64145040_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-3190-5p | chr12 | 64145034 | 64145040 | 7mer-m8 | 64145017 | 64145041 | 148 | -28.85 |
| ADediting_1533672 | chr12_64145040_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-548s | chr12 | 64145033 | 64145039 | 7mer-m8 | 64145019 | 64145040 | 147 | -12.76 |
| ADediting_364843 | chr12_64143668_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-6872-3p | chr12 | 64143664 | 64143670 | 7mer-m8 | 64143651 | 64143671 | 145 | -14.44 |
| ADediting_364843 | chr12_64143668_+ | ENSG00000196935.9 | ENST00000543397.1 | SRGAP1-206 | hsa-miR-6872-3p | chr12 | 64143664 | 64143670 | 7mer-m8 | 64143651 | 64143671 | 145 | -14.44 |
| ADediting_364843 | chr12_64143668_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-6872-3p | chr12 | 64143664 | 64143670 | 7mer-m8 | 64143651 | 64143671 | 145 | -14.44 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-3929 | chr12 | 64145080 | 64145086 | 7mer-m8 | 64145065 | 64145087 | 153 | -20.79 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4478 | chr12 | 64145080 | 64145086 | 7mer-m8 | 64145070 | 64145087 | 151 | -23.36 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4649-3p | chr12 | 64145077 | 64145083 | 7mer-m8 | 64145062 | 64145084 | 145 | -16.62 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-485-5p | chr12 | 64145081 | 64145087 | 7mer-m8 | 64145067 | 64145088 | 149 | -16.08 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-6884-5p | chr12 | 64145081 | 64145087 | 7mer-m8 | 64145069 | 64145088 | 156 | -23.62 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-7160-5p | chr12 | 64145078 | 64145084 | 7mer-m8 | 64145066 | 64145085 | 144 | -18.23 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-3929 | chr12 | 64145080 | 64145086 | 7mer-m8 | 64145065 | 64145087 | 153 | -20.79 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-4478 | chr12 | 64145080 | 64145086 | 7mer-m8 | 64145070 | 64145087 | 151 | -23.36 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-4649-3p | chr12 | 64145077 | 64145083 | 7mer-m8 | 64145062 | 64145084 | 145 | -16.62 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-485-5p | chr12 | 64145081 | 64145087 | 7mer-m8 | 64145067 | 64145088 | 149 | -16.08 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-6884-5p | chr12 | 64145081 | 64145087 | 7mer-m8 | 64145069 | 64145088 | 156 | -23.62 |
| ADediting_364845 | chr12_64145083_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-7160-5p | chr12 | 64145078 | 64145084 | 7mer-m8 | 64145066 | 64145085 | 144 | -18.23 |
| ADediting_364846 | chr12_64145105_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-3686 | chr12 | 64145102 | 64145108 | 7mer-m8 | 64145088 | 64145109 | 140 | -13.03 |
| ADediting_364846 | chr12_64145105_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-3686 | chr12 | 64145102 | 64145108 | 7mer-m8 | 64145088 | 64145109 | 140 | -13.03 |
| ADediting_364847 | chr12_64148351_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-3160-3p | chr12 | 64148348 | 64148355 | 8mer-1a | 64148334 | 64148355 | 152 | -18.07 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5688 | chr12 | 64158312 | 64158319 | 8mer-1a | 64158295 | 64158319 | 141 | -13.45 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-589-3p | chr12 | 64144874 | 64144880 | 7mer-m8 | 64144857 | 64144881 | 162 | -22.72 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-589-3p | chr12 | 64147608 | 64147614 | 7mer-m8 | 64147592 | 64147615 | 147 | -16.53 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-589-3p | chr12 | 64144874 | 64144880 | 7mer-m8 | 64144857 | 64144881 | 162 | -22.72 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-589-3p | chr12 | 64147608 | 64147614 | 7mer-m8 | 64147592 | 64147615 | 147 | -16.53 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-589-5p | chr12 | 64152771 | 64152777 | 7mer-m8 | 64152757 | 64152778 | 144 | -15.66 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4477b | chr12 | 64152127 | 64152133 | 7mer-m8 | 64152113 | 64152134 | 148 | -11.28 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4477b | chr12 | 64153751 | 64153758 | 8mer-1a | 64153737 | 64153758 | 153 | -13.14 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4477b | chr12 | 64161418 | 64161424 | 7mer-m8 | 64161404 | 64161425 | 157 | -13.31 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-337-3p | chr12 | 64156514 | 64156520 | 7mer-m8 | 64156497 | 64156521 | 160 | -17.94 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-381-3p | chr12 | 64147923 | 64147929 | 7mer-m8 | 64147911 | 64147930 | 156 | -15.5 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-556-3p | chr12 | 64157669 | 64157676 | 8mer-1a | 64157656 | 64157676 | 150 | -12.97 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-556-3p | chr12 | 64157715 | 64157721 | 7mer-m8 | 64157701 | 64157722 | 147 | -14.75 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-641 | chr12 | 64151763 | 64151769 | 7mer-1a | 64151746 | 64151769 | 148 | -19.64 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-641 | chr12 | 64160439 | 64160445 | 7mer-m8 | 64160423 | 64160446 | 145 | -16.68 |
| ADediting_286380 | chr11_79422188_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5579-3p | chr12 | 64150530 | 64150536 | 7mer-m8 | 64150517 | 64150537 | 148 | -16.81 |
| ADediting_286380 | chr11_79422188_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5579-3p | chr12 | 64151084 | 64151091 | 8mer-1a | 64151070 | 64151091 | 140 | -11.66 |
| ADediting_286380 | chr11_79422188_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5579-3p | chr12 | 64152944 | 64152951 | 8mer-1a | 64152930 | 64152951 | 154 | -12.7 |
| ADediting_286380 | chr11_79422188_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5579-3p | chr12 | 64156674 | 64156680 | 7mer-m8 | 64156661 | 64156681 | 141 | -10.87 |
| ADediting_286380 | chr11_79422188_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5579-3p | chr12 | 64161953 | 64161959 | 7mer-m8 | 64161939 | 64161960 | 140 | -11.55 |
| ADediting_496066 | chr15_66496985_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4512 | chr12 | 64143396 | 64143402 | 7mer-m8 | 64143381 | 64143403 | 154 | -26.56 |
| ADediting_496066 | chr15_66496985_- | ENSG00000196935.9 | ENST00000543397.1 | SRGAP1-206 | hsa-miR-4512 | chr12 | 64143396 | 64143402 | 7mer-m8 | 64143381 | 64143403 | 154 | -26.56 |
| ADediting_496066 | chr15_66496985_- | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-4512 | chr12 | 64143396 | 64143402 | 7mer-m8 | 64143381 | 64143403 | 154 | -26.56 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64144426 | 64144433 | 8mer-1a | 64144413 | 64144433 | 149 | -11.83 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64150489 | 64150495 | 7mer-m8 | 64150475 | 64150496 | 145 | -7.37 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64154487 | 64154494 | 8mer-1a | 64154473 | 64154494 | 143 | -10.52 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64156082 | 64156088 | 7mer-m8 | 64156068 | 64156089 | 140 | -3.62 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64156749 | 64156755 | 7mer-m8 | 64156735 | 64156756 | 156 | -8.53 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64157572 | 64157579 | 8mer-1a | 64157557 | 64157579 | 149 | -12.24 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64158481 | 64158487 | 7mer-m8 | 64158462 | 64158488 | 150 | -12.27 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64160406 | 64160413 | 8mer-1a | 64160392 | 64160413 | 151 | -12.44 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-4775 | chr12 | 64144426 | 64144433 | 8mer-1a | 64144413 | 64144433 | 149 | -11.83 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5585-3p | chr12 | 64149247 | 64149254 | 8mer-1a | 64149229 | 64149254 | 150 | -22.93 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5585-3p | chr12 | 64146185 | 64146192 | 8mer-1a | 64146169 | 64146192 | 147 | -14.93 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5585-3p | chr12 | 64158941 | 64158947 | 7mer-m8 | 64158929 | 64158948 | 156 | -19.28 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-5585-3p | chr12 | 64146185 | 64146192 | 8mer-1a | 64146169 | 64146192 | 147 | -14.93 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5581-3p | chr12 | 64159775 | 64159781 | 7mer-m8 | 64159758 | 64159782 | 146 | -15.69 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5688 | chr12 | 64147786 | 64147792 | 7mer-m8 | 64147770 | 64147793 | 148 | -11.77 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5688 | chr12 | 64151704 | 64151711 | 8mer-1a | 64151690 | 64151711 | 149 | -10.91 |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-5688 | chr12 | 64147786 | 64147792 | 7mer-m8 | 64147770 | 64147793 | 148 | -11.77 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-589-3p | chr12 | 64145839 | 64145845 | 7mer-m8 | 64145824 | 64145846 | 148 | -14.11 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-589-3p | chr12 | 64145839 | 64145845 | 7mer-m8 | 64145824 | 64145846 | 148 | -14.11 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4477b | chr12 | 64146440 | 64146446 | 7mer-m8 | 64146426 | 64146447 | 151 | -13.04 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4477b | chr12 | 64156261 | 64156267 | 7mer-m8 | 64156248 | 64156268 | 146 | -10.14 |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-4477b | chr12 | 64146440 | 64146446 | 7mer-m8 | 64146426 | 64146447 | 151 | -13.04 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4477b | chr12 | 64146440 | 64146446 | 7mer-m8 | 64146426 | 64146447 | 151 | -13.04 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4477b | chr12 | 64156261 | 64156267 | 7mer-m8 | 64156248 | 64156268 | 146 | -10.14 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-4477b | chr12 | 64146440 | 64146446 | 7mer-m8 | 64146426 | 64146447 | 151 | -13.04 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-641 | chr12 | 64157635 | 64157641 | 7mer-m8 | 64157619 | 64157642 | 141 | -9.96 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-641 | chr12 | 64157635 | 64157641 | 7mer-m8 | 64157619 | 64157642 | 141 | -9.96 |
| ADediting_1643790 | chr3_121049689_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5682 | chr12 | 64158440 | 64158447 | 8mer-1a | 64158426 | 64158447 | 141 | -14.14 |
| ADediting_286380 | chr11_79422188_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5579-3p | chr12 | 64150877 | 64150883 | 7mer-m8 | 64150862 | 64150884 | 151 | -14.17 |
| ADediting_286380 | chr11_79422188_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5579-3p | chr12 | 64151938 | 64151945 | 8mer-1a | 64151927 | 64151945 | 151 | -15.01 |
| ADediting_286380 | chr11_79422188_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-5579-3p | chr12 | 64154015 | 64154022 | 8mer-1a | 64154001 | 64154022 | 140 | -11.82 |
| ADediting_291761 | chr11_93733708_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-1304-3p | chr12 | 64146601 | 64146608 | 8mer-1a | 64146584 | 64146608 | 146 | -14.83 |
| ADediting_291761 | chr11_93733708_- | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-1304-3p | chr12 | 64153455 | 64153462 | 8mer-1a | 64153442 | 64153462 | 153 | -23.4 |
| ADediting_291761 | chr11_93733708_- | ENSG00000196935.9 | ENST00000631006.2 | SRGAP1-207 | hsa-miR-1304-3p | chr12 | 64146601 | 64146608 | 8mer-1a | 64146584 | 64146608 | 146 | -14.83 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64152249 | 64152256 | 8mer-1a | 64152236 | 64152256 | 150 | -12.18 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64153319 | 64153325 | 7mer-m8 | 64153305 | 64153326 | 147 | -9.23 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64153758 | 64153765 | 8mer-1a | 64153744 | 64153765 | 155 | -12.22 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64155390 | 64155396 | 7mer-m8 | 64155375 | 64155397 | 153 | -7.86 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64158618 | 64158624 | 7mer-m8 | 64158605 | 64158625 | 152 | -9.33 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000196935.9 | ENST00000355086.8 | SRGAP1-201 | hsa-miR-4775 | chr12 | 64161165 | 64161172 | 8mer-1a | 64161147 | 64161172 | 150 | -7.74 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for SRGAP1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000631006.2 | protein_coding |  |  |
| ENST00000543397.1 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_364843 | ENST00000355086.8 | chr12_64143668_+ | 4371 | -7592.89 | -7592.99 | -7604.59 |
| ADediting_364844 | ENST00000355086.8 | chr12_64144945_+ | 5648 | -7592.69 | -7592.99 | -7604.59 |
| ADediting_1533672 | ENST00000355086.8 | chr12_64145040_+ | 5743 | -7592.29 | -7592.99 | -7604.59 |
| ADediting_364845 | ENST00000355086.8 | chr12_64145083_+ | 5786 | -7596.79 | -7592.99 | -7604.59 |
| ADediting_364846 | ENST00000355086.8 | chr12_64145105_+ | 5808 | -7592.99 | -7592.99 | -7604.59 |
| ADediting_364847 | ENST00000355086.8 | chr12_64148351_+ | 9054 | -7599.19 | -7592.99 | -7604.59 |
| ADediting_364848 | ENST00000355086.8 | chr12_64148381_+ | 9084 | -7592.69 | -7592.99 | -7604.59 |
| ADediting_364849 | ENST00000355086.8 | chr12_64148382_+ | 9085 | -7592.69 | -7592.99 | -7604.59 |
| ADediting_364850 | ENST00000355086.8 | chr12_64150705_+ | 11408 | -7596.79 | -7592.99 | -7604.59 |
| ADediting_364843 | ENST00000631006.2 | chr12_64143668_+ | 4241 | -2473.09 | -2473.49 | -2473.79 |
| ADediting_364844 | ENST00000631006.2 | chr12_64144945_+ | 5518 | -2474.99 | -2473.49 | -2473.79 |
| ADediting_1533672 | ENST00000631006.2 | chr12_64145040_+ | 5613 | -2472.79 | -2473.49 | -2473.79 |
| ADediting_364845 | ENST00000631006.2 | chr12_64145083_+ | 5656 | -2473.39 | -2473.49 | -2473.79 |
| ADediting_364846 | ENST00000631006.2 | chr12_64145105_+ | 5678 | -2473.49 | -2473.49 | -2473.79 |
| ADediting_364843 | ENST00000543397.1 | chr12_64143668_+ | 5540 | -1632.89 | -1632.99 | -1632.89 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for SRGAP1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_364754 | chr12_63873262_+ | 0.256792169984966 | 0.064600868747516 | 0.489097289666688 | -0.0394325075174123 | 5.30578268815103e-08 | 0.302945749061461 |
| DLPFC | ADediting_364756 | chr12_63873276_+ | 0.469669550319131 | -0.0412136381630298 | 0.0664882722779449 | -0.104364486803569 | 6.92680547484756e-08 | 0.300414676848832 |
| DLPFC | ADediting_364758 | chr12_63873329_+ | 0.049235910496187 | -0.111793409473395 | 0.00165184507335839 | -0.178004228039757 | 2.76152782963107e-08 | 0.309045499486221 |
| DLPFC | ADediting_364767 | chr12_63873905_+ | 0.840419351712632 | 0.0114823239887772 | 0.182955806051955 | -0.0758333892552905 | 1.88467183996054e-08 | 0.312550660216832 |
| DLPFC | ADediting_364769 | chr12_63873925_+ | 0.669952503614549 | -0.0243018809356464 | 0.0636639916101899 | -0.10546210963248 | 6.479613724175e-08 | 0.301050548625882 |
| CER | ADediting_364843 | chr12_64143668_+ | 1.45922250008812e-05 | 0.345840344437015 | 0.00348431406237307 | 0.237105907191628 | 0.00697958080389588 | 0.219420342687017 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| AC | 1.16326523214742e-14 | 0.462595478406501 | 6.7852149535578e-13 | 0.433818320067827 | 4.86322698302454e-08 | 0.336645187746 |
| PCC | 0.0805511360336935 | 0.126765983177735 | 0.916333974390882 | 0.00765146343718398 | 3.79435248689556e-07 | 0.35762384227565 |
| CER | 6.40348510843315e-11 | 0.501300656915033 | 1.68620539984734e-09 | 0.467093186830237 | 7.47575576564779e-12 | 0.521865275860801 |
| TCX | 1.76841368231005e-05 | 0.342660506491709 | 0.291700794353841 | -0.0866540705701595 | 9.95380894336228e-17 | 0.611136540901857 |
| FP | 0.00123378141219046 | 0.240304625298895 | 0.839853887179016 | -0.015253146088606 | 2.38609709290047e-10 | 0.452055370867045 |
| IFG | 0.185228717294333 | 0.273887147431112 | 0.109469838402743 | 0.327980214484809 | 0.000177977540489251 | 0.6811638549114 |
| PG | 1.51443106143115e-18 | 0.58611605171504 | 2.11170505842601e-09 | 0.421354953167851 | 0.0735996689510603 | 0.131498969976819 |
| STG | 0.266038690457599 | 0.122733943145682 | 0.676987693093304 | -0.0461191427053227 | 3.24757516639821e-06 | 0.483106983661479 |
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Relation with AD stages for SRGAP1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 1.64434209968514e-07 | 0.47832185019483 |
| TCX | 1.86023405198774e-11 | 0.594345011005885 |
| IFG | 0.0320556013858726 | 0.429690414213921 |
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RelatedDrugs for SRGAP1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SRGAP1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| SRGAP1 | C4225426 | THYROID CANCER, NONMEDULLARY, 2 | 1 | UNIPROT |
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