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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for TBC1D24 |
 Gene summary |
| Gene information | Gene symbol | TBC1D24 | Gene ID | 57465 |
| Gene name | TBC1 domain family member 24 | |
| Synonyms | DFNA65|DFNB86|DOORS|EIEE16|EPRPDC|FIME|TLDC6 | |
| Cytomap | 16p13.3 | |
| Type of gene | protein-coding | |
| Description | TBC1 domain family member 24TBC/LysM-associated domain containing 6skywalker homolog | |
| Modification date | 20200313 | |
| UniProtAcc | Q9ULP9, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| TBC1D24 | GO:0031175 | neuron projection development | 30335140 |
| TBC1D24 | GO:0036475 | neuron death in response to oxidative stress | 30335140 |
Top |
RNA A-to-I events for TBC1D24 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_529544(2477317, +), ADediting_529545(2477318, +), ADediting_529546(2477323, +), ADediting_529547(2477334, +), ADediting_529548(2477347, +), ADediting_529549(2477363, +), ADediting_529550(2477371, +), ADediting_529551(2477372, +), ADediting_529552(2477386, +), ADediting_529553(2477387, +), ADediting_529554(2477391, +), ADediting_529555(2477414, +), ADediting_529556(2477415, +), ADediting_529557(2477418, +), ADediting_529558(2477423, +), ADediting_529559(2477434, +), ADediting_529560(2477450, +), ADediting_529561(2477454, +), ADediting_529562(2477462, +), ADediting_529563(2477471, +), ADediting_529564(2477474, +), ADediting_529565(2477480, +), ADediting_529566(2477485, +), ADediting_529567(2477498, +), ADediting_529568(2477499, +), ADediting_529569(2477506, +), ADediting_529570(2477535, +), ADediting_529571(2478212, +), ADediting_529572(2478218, +), ADediting_529573(2478219, +), ADediting_529574(2478776, +), ADediting_529575(2478834, +), ADediting_529576(2478851, +), ADediting_529577(2478933, +), ADediting_529578(2478938, +), ADediting_529579(2478996, +), ADediting_529580(2479005, +), ADediting_529581(2479010, +), ADediting_529582(2479022, +), ADediting_529583(2479034, +), ADediting_529584(2479042, +), ADediting_529585(2479054, +), ADediting_529586(2479074, +), ADediting_529587(2479076, +), ADediting_529588(2479102, +), ADediting_529589(2479113, +), ADediting_529590(2479114, +), ADediting_529591(2479128, +), ADediting_529592(2479131, +), ADediting_529593(2479154, +), ADediting_529594(2479155, +), ADediting_529595(2479166, +), ADediting_529596(2479933, +), ADediting_529597(2479962, +), ADediting_529598(2479972, +), ADediting_529599(2480032, +), ADediting_529600(2480104, +), ADediting_529601(2480147, +), ADediting_529602(2480148, +), ADediting_529603(2480243, +), ADediting_529604(2480270, +), ADediting_529605(2480314, +), ADediting_529606(2480320, +), ADediting_529607(2480323, +), ADediting_529608(2480331, +), ADediting_529609(2480365, +), ADediting_529610(2480383, +), ADediting_529611(2480392, +), ADediting_529612(2480404, +), ADediting_529613(2480410, +), ADediting_529614(2481260, +), ADediting_529615(2481289, +), ADediting_529616(2481295, +), ADediting_529617(2481306, +), ADediting_529618(2481310, +), ADediting_529619(2481311, +), ADediting_529620(2481319, +), ADediting_529621(2481362, +), ADediting_529627(2493346, +), ADediting_529628(2494165, +), ADediting_529672(2504558, +), ADediting_529673(2504976, +), ADediting_529679(2506100, +), ADediting_529680(2506101, +), ADediting_529681(2506107, +), ADediting_529682(2506114, +), ADediting_529683(2506123, +), ADediting_529765(2509545, +), ADediting_1541625(2479127, +), ADediting_1541636(2508444, +), ADediting_1541637(2508473, +), |
Top |
RNA editing positional annotations for TBC1D24 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_529544 | chr16_2477317_+ | ncRNA_exonic |
| ADediting_529545 | chr16_2477318_+ | ncRNA_exonic |
| ADediting_529546 | chr16_2477323_+ | ncRNA_exonic |
| ADediting_529547 | chr16_2477334_+ | ncRNA_exonic |
| ADediting_529548 | chr16_2477347_+ | ncRNA_exonic |
| ADediting_529549 | chr16_2477363_+ | ncRNA_exonic |
| ADediting_529550 | chr16_2477371_+ | ncRNA_exonic |
| ADediting_529551 | chr16_2477372_+ | ncRNA_exonic |
| ADediting_529552 | chr16_2477386_+ | ncRNA_exonic |
| ADediting_529553 | chr16_2477387_+ | ncRNA_exonic |
| ADediting_529554 | chr16_2477391_+ | ncRNA_exonic |
| ADediting_529555 | chr16_2477414_+ | ncRNA_exonic |
| ADediting_529556 | chr16_2477415_+ | ncRNA_exonic |
| ADediting_529557 | chr16_2477418_+ | ncRNA_exonic |
| ADediting_529558 | chr16_2477423_+ | ncRNA_exonic |
| ADediting_529559 | chr16_2477434_+ | ncRNA_exonic |
| ADediting_529560 | chr16_2477450_+ | ncRNA_exonic |
| ADediting_529561 | chr16_2477454_+ | ncRNA_exonic |
| ADediting_529562 | chr16_2477462_+ | ncRNA_exonic |
| ADediting_529563 | chr16_2477471_+ | ncRNA_exonic |
| ADediting_529564 | chr16_2477474_+ | ncRNA_exonic |
| ADediting_529565 | chr16_2477480_+ | ncRNA_exonic |
| ADediting_529566 | chr16_2477485_+ | ncRNA_exonic |
| ADediting_529567 | chr16_2477498_+ | ncRNA_exonic |
| ADediting_529568 | chr16_2477499_+ | ncRNA_exonic |
| ADediting_529569 | chr16_2477506_+ | ncRNA_exonic |
| ADediting_529570 | chr16_2477535_+ | ncRNA_exonic |
| ADediting_529571 | chr16_2478212_+ | ncRNA_exonic |
| ADediting_529572 | chr16_2478218_+ | ncRNA_exonic |
| ADediting_529573 | chr16_2478219_+ | ncRNA_exonic |
| ADediting_529574 | chr16_2478776_+ | ncRNA_exonic |
| ADediting_529575 | chr16_2478834_+ | ncRNA_exonic |
| ADediting_529576 | chr16_2478851_+ | ncRNA_exonic |
| ADediting_529577 | chr16_2478933_+ | ncRNA_exonic |
| ADediting_529578 | chr16_2478938_+ | ncRNA_exonic |
| ADediting_529579 | chr16_2478996_+ | ncRNA_exonic |
| ADediting_529580 | chr16_2479005_+ | ncRNA_exonic |
| ADediting_529581 | chr16_2479010_+ | ncRNA_exonic |
| ADediting_529582 | chr16_2479022_+ | ncRNA_exonic |
| ADediting_529583 | chr16_2479034_+ | ncRNA_exonic |
| ADediting_529584 | chr16_2479042_+ | ncRNA_exonic |
| ADediting_529585 | chr16_2479054_+ | ncRNA_exonic |
| ADediting_529586 | chr16_2479074_+ | ncRNA_exonic |
| ADediting_529587 | chr16_2479076_+ | ncRNA_exonic |
| ADediting_529588 | chr16_2479102_+ | ncRNA_exonic |
| ADediting_529589 | chr16_2479113_+ | ncRNA_exonic |
| ADediting_529590 | chr16_2479114_+ | ncRNA_exonic |
| ADediting_529591 | chr16_2479128_+ | ncRNA_exonic |
| ADediting_529592 | chr16_2479131_+ | ncRNA_exonic |
| ADediting_529593 | chr16_2479154_+ | ncRNA_exonic |
| ADediting_529594 | chr16_2479155_+ | ncRNA_exonic |
| ADediting_529595 | chr16_2479166_+ | ncRNA_exonic |
| ADediting_529596 | chr16_2479933_+ | ncRNA_exonic |
| ADediting_529597 | chr16_2479962_+ | ncRNA_exonic |
| ADediting_529598 | chr16_2479972_+ | ncRNA_exonic |
| ADediting_529599 | chr16_2480032_+ | ncRNA_exonic |
| ADediting_529600 | chr16_2480104_+ | ncRNA_exonic |
| ADediting_529601 | chr16_2480147_+ | ncRNA_exonic |
| ADediting_529602 | chr16_2480148_+ | ncRNA_exonic |
| ADediting_529603 | chr16_2480243_+ | ncRNA_exonic |
| ADediting_529604 | chr16_2480270_+ | ncRNA_exonic |
| ADediting_529605 | chr16_2480314_+ | ncRNA_exonic |
| ADediting_529606 | chr16_2480320_+ | ncRNA_exonic |
| ADediting_529607 | chr16_2480323_+ | ncRNA_exonic |
| ADediting_529608 | chr16_2480331_+ | ncRNA_exonic |
| ADediting_529609 | chr16_2480365_+ | ncRNA_exonic |
| ADediting_529610 | chr16_2480383_+ | ncRNA_exonic |
| ADediting_529611 | chr16_2480392_+ | ncRNA_exonic |
| ADediting_529612 | chr16_2480404_+ | ncRNA_exonic |
| ADediting_529613 | chr16_2480410_+ | ncRNA_exonic |
| ADediting_529614 | chr16_2481260_+ | ncRNA_exonic |
| ADediting_529615 | chr16_2481289_+ | ncRNA_exonic |
| ADediting_529616 | chr16_2481295_+ | ncRNA_exonic |
| ADediting_529617 | chr16_2481306_+ | ncRNA_exonic |
| ADediting_529618 | chr16_2481310_+ | ncRNA_exonic |
| ADediting_529619 | chr16_2481311_+ | ncRNA_exonic |
| ADediting_529620 | chr16_2481319_+ | ncRNA_exonic |
| ADediting_529621 | chr16_2481362_+ | ncRNA_exonic |
| ADediting_529627 | chr16_2493346_+ | intronic |
| ADediting_529628 | chr16_2494165_+ | intronic |
| ADediting_529672 | chr16_2504558_+ | UTR3 |
| ADediting_529673 | chr16_2504976_+ | UTR3 |
| ADediting_529679 | chr16_2506100_+ | intronic |
| ADediting_529680 | chr16_2506101_+ | intronic |
| ADediting_529681 | chr16_2506107_+ | intronic |
| ADediting_529682 | chr16_2506114_+ | intronic |
| ADediting_529683 | chr16_2506123_+ | intronic |
| ADediting_529765 | chr16_2509545_+ | intronic |
| ADediting_1541625 | chr16_2479127_+ | ncRNA_exonic |
| ADediting_1541636 | chr16_2508444_+ | intronic |
| ADediting_1541637 | chr16_2508473_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_529544 | chr16_2477317_+ | SINE | Alu | Name=AluJo |
| ADediting_529545 | chr16_2477318_+ | SINE | Alu | Name=AluJo |
| ADediting_529546 | chr16_2477323_+ | SINE | Alu | Name=AluJo |
| ADediting_529547 | chr16_2477334_+ | SINE | Alu | Name=AluJo |
| ADediting_529548 | chr16_2477347_+ | SINE | Alu | Name=AluJo |
| ADediting_529549 | chr16_2477363_+ | SINE | Alu | Name=AluJo |
| ADediting_529550 | chr16_2477371_+ | SINE | Alu | Name=AluJo |
| ADediting_529551 | chr16_2477372_+ | SINE | Alu | Name=AluJo |
| ADediting_529552 | chr16_2477386_+ | SINE | Alu | Name=AluJo |
| ADediting_529553 | chr16_2477387_+ | SINE | Alu | Name=AluJo |
| ADediting_529554 | chr16_2477391_+ | SINE | Alu | Name=AluJo |
| ADediting_529555 | chr16_2477414_+ | SINE | Alu | Name=AluJo |
| ADediting_529556 | chr16_2477415_+ | SINE | Alu | Name=AluJo |
| ADediting_529557 | chr16_2477418_+ | SINE | Alu | Name=AluJo |
| ADediting_529558 | chr16_2477423_+ | SINE | Alu | Name=AluJo |
| ADediting_529559 | chr16_2477434_+ | SINE | Alu | Name=AluJo |
| ADediting_529560 | chr16_2477450_+ | SINE | Alu | Name=AluJo |
| ADediting_529561 | chr16_2477454_+ | SINE | Alu | Name=AluJo |
| ADediting_529562 | chr16_2477462_+ | SINE | Alu | Name=AluJo |
| ADediting_529563 | chr16_2477471_+ | SINE | Alu | Name=AluJo |
| ADediting_529564 | chr16_2477474_+ | SINE | Alu | Name=AluJo |
| ADediting_529565 | chr16_2477480_+ | SINE | Alu | Name=AluJo |
| ADediting_529566 | chr16_2477485_+ | SINE | Alu | Name=AluJo |
| ADediting_529567 | chr16_2477498_+ | SINE | Alu | Name=AluJo |
| ADediting_529568 | chr16_2477499_+ | SINE | Alu | Name=AluJo |
| ADediting_529569 | chr16_2477506_+ | SINE | Alu | Name=AluJo |
| ADediting_529570 | chr16_2477535_+ | SINE | Alu | Name=AluJo |
| ADediting_529571 | chr16_2478212_+ | SINE | Alu | Name=FRAM |
| ADediting_529572 | chr16_2478218_+ | SINE | Alu | Name=FRAM |
| ADediting_529573 | chr16_2478219_+ | SINE | Alu | Name=FRAM |
| ADediting_529574 | chr16_2478776_+ | SINE | Alu | Name=AluJb |
| ADediting_529575 | chr16_2478834_+ | SINE | Alu | Name=AluJb |
| ADediting_529576 | chr16_2478851_+ | SINE | Alu | Name=AluJb |
| ADediting_529577 | chr16_2478933_+ | SINE | Alu | Name=AluJb |
| ADediting_529578 | chr16_2478938_+ | SINE | Alu | Name=AluJb |
| ADediting_529579 | chr16_2478996_+ | SINE | Alu | Name=AluJb |
| ADediting_529580 | chr16_2479005_+ | SINE | Alu | Name=AluJb |
| ADediting_529581 | chr16_2479010_+ | SINE | Alu | Name=AluJb |
| ADediting_529582 | chr16_2479022_+ | SINE | Alu | Name=AluJb |
| ADediting_529583 | chr16_2479034_+ | SINE | Alu | Name=AluJb |
| ADediting_529584 | chr16_2479042_+ | SINE | Alu | Name=AluJb |
| ADediting_529585 | chr16_2479054_+ | SINE | Alu | Name=AluJb |
| ADediting_529586 | chr16_2479074_+ | SINE | Alu | Name=AluJb |
| ADediting_529587 | chr16_2479076_+ | SINE | Alu | Name=AluJb |
| ADediting_529588 | chr16_2479102_+ | SINE | Alu | Name=AluJb |
| ADediting_529589 | chr16_2479113_+ | SINE | Alu | Name=AluJb |
| ADediting_529590 | chr16_2479114_+ | SINE | Alu | Name=AluJb |
| ADediting_529591 | chr16_2479128_+ | SINE | Alu | Name=AluJb |
| ADediting_529592 | chr16_2479131_+ | SINE | Alu | Name=AluJb |
| ADediting_529593 | chr16_2479154_+ | SINE | Alu | Name=AluJb |
| ADediting_529594 | chr16_2479155_+ | SINE | Alu | Name=AluJb |
| ADediting_529595 | chr16_2479166_+ | SINE | Alu | Name=AluJb |
| ADediting_529596 | chr16_2479933_+ | SINE | Alu | Name=AluSq |
| ADediting_529597 | chr16_2479962_+ | SINE | Alu | Name=AluSq |
| ADediting_529598 | chr16_2479972_+ | SINE | Alu | Name=AluSq |
| ADediting_529599 | chr16_2480032_+ | SINE | Alu | Name=AluSq |
| ADediting_529600 | chr16_2480104_+ | SINE | Alu | Name=AluSq |
| ADediting_529601 | chr16_2480147_+ | SINE | Alu | Name=AluJb |
| ADediting_529602 | chr16_2480148_+ | SINE | Alu | Name=AluJb |
| ADediting_529603 | chr16_2480243_+ | SINE | Alu | Name=AluJb |
| ADediting_529604 | chr16_2480270_+ | SINE | Alu | Name=AluJb |
| ADediting_529605 | chr16_2480314_+ | SINE | Alu | Name=AluJb |
| ADediting_529606 | chr16_2480320_+ | SINE | Alu | Name=AluJb |
| ADediting_529607 | chr16_2480323_+ | SINE | Alu | Name=AluJb |
| ADediting_529608 | chr16_2480331_+ | SINE | Alu | Name=AluJb |
| ADediting_529609 | chr16_2480365_+ | SINE | Alu | Name=AluJb |
| ADediting_529610 | chr16_2480383_+ | SINE | Alu | Name=AluJb |
| ADediting_529611 | chr16_2480392_+ | SINE | Alu | Name=AluJb |
| ADediting_529612 | chr16_2480404_+ | SINE | Alu | Name=AluJb |
| ADediting_529613 | chr16_2480410_+ | SINE | Alu | Name=AluJb |
| ADediting_529615 | chr16_2481289_+ | SINE | Alu | Name=AluJr |
| ADediting_529616 | chr16_2481295_+ | SINE | Alu | Name=AluJr |
| ADediting_529617 | chr16_2481306_+ | SINE | Alu | Name=AluJr |
| ADediting_529618 | chr16_2481310_+ | SINE | Alu | Name=AluJr |
| ADediting_529619 | chr16_2481311_+ | SINE | Alu | Name=AluJr |
| ADediting_529620 | chr16_2481319_+ | SINE | Alu | Name=AluJr |
| ADediting_529621 | chr16_2481362_+ | SINE | Alu | Name=AluJr |
| ADediting_529627 | chr16_2493346_+ | SINE | Alu | Name=AluY |
| ADediting_529628 | chr16_2494165_+ | SINE | Alu | Name=AluSg |
| ADediting_529672 | chr16_2504558_+ | SINE | Alu | Name=AluY |
| ADediting_529673 | chr16_2504976_+ | SINE | Alu | Name=FLAM_C |
| ADediting_529679 | chr16_2506100_+ | SINE | Alu | Name=AluJr |
| ADediting_529680 | chr16_2506101_+ | SINE | Alu | Name=AluJr |
| ADediting_529681 | chr16_2506107_+ | SINE | Alu | Name=AluJr |
| ADediting_529682 | chr16_2506114_+ | SINE | Alu | Name=AluJr |
| ADediting_529683 | chr16_2506123_+ | SINE | Alu | Name=AluJr |
| ADediting_529765 | chr16_2509545_+ | SINE | Alu | Name=AluYc |
| ADediting_1541625 | chr16_2479127_+ | SINE | Alu | Name=AluJb |
| ADediting_1541636 | chr16_2508444_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1541637 | chr16_2508473_+ | SINE | Alu | Name=AluSx1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for TBC1D24 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TBC1D24 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for TBC1D24 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for TBC1D24 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_529672 | chr16_2504558_+ | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-17-3p | chr16 | 2504554 | 2504560 | 7mer-m8 | 2504539 | 2504561 | 150 | -22.27 |
| ADediting_529672 | chr16_2504558_+ | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-17-3p | chr16 | 2504554 | 2504560 | 7mer-m8 | 2504539 | 2504561 | 150 | -22.27 |
| ADediting_529673 | chr16_2504976_+ | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-1288-3p | chr16 | 2504972 | 2504978 | 7mer-m8 | 2504959 | 2504979 | 151 | -22.88 |
| ADediting_529673 | chr16_2504976_+ | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-3169 | chr16 | 2504973 | 2504979 | 7mer-m8 | 2504961 | 2504980 | 148 | -17.92 |
| ADediting_529673 | chr16_2504976_+ | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-1288-3p | chr16 | 2504972 | 2504978 | 7mer-m8 | 2504959 | 2504979 | 151 | -22.88 |
| ADediting_529673 | chr16_2504976_+ | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-3169 | chr16 | 2504973 | 2504979 | 7mer-m8 | 2504961 | 2504980 | 148 | -17.92 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_529672 | chr16_2504558_+ | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-20b-3p | chr16 | 2504554 | 2504560 | 7mer-m8 | 2504539 | 2504561 | 153 | -18.04 |
| ADediting_529672 | chr16_2504558_+ | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-20b-3p | chr16 | 2504554 | 2504560 | 7mer-m8 | 2504539 | 2504561 | 153 | -18.04 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1541637 | chr16_2508473_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-3940-3p | chr16 | 2508471 | 2508477 | 7mer-m8 | 2508457 | 2508478 | 142 | -20.09 |
| ADediting_1541637 | chr16_2508473_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-6850-3p | chr16 | 2508468 | 2508474 | 7mer-m8 | 2508456 | 2508475 | 146 | -22.88 |
| ADediting_529672 | chr16_2504558_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-17-3p | chr16 | 2504555 | 2504561 | 7mer-m8 | 2504540 | 2504562 | 150 | -22.27 |
| ADediting_529673 | chr16_2504976_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-1288-3p | chr16 | 2504973 | 2504979 | 7mer-m8 | 2504960 | 2504980 | 151 | -22.88 |
| ADediting_529673 | chr16_2504976_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-3169 | chr16 | 2504974 | 2504980 | 7mer-m8 | 2504962 | 2504981 | 148 | -17.92 |
| ADediting_529679 | chr16_2506100_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-638 | chr16 | 2506100 | 2506106 | 7mer-1a | 2506082 | 2506106 | 155 | -35.53 |
| ADediting_529681 | chr16_2506107_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-1343-3p | chr16 | 2506103 | 2506109 | 7mer-m8 | 2506089 | 2506110 | 141 | -16.35 |
| ADediting_529681 | chr16_2506107_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-6506-5p | chr16 | 2506101 | 2506107 | 7mer-m8 | 2506086 | 2506108 | 140 | -14.96 |
| ADediting_529681 | chr16_2506107_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-6783-3p | chr16 | 2506103 | 2506109 | 7mer-m8 | 2506089 | 2506110 | 147 | -13.34 |
| ADediting_529681 | chr16_2506107_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-6838-3p | chr16 | 2506105 | 2506111 | 7mer-m8 | 2506093 | 2506112 | 140 | -13.45 |
| ADediting_529682 | chr16_2506114_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-150-5p | chr16 | 2506112 | 2506118 | 7mer-m8 | 2506097 | 2506119 | 145 | -16.58 |
| ADediting_529682 | chr16_2506114_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-186-3p | chr16 | 2506110 | 2506117 | 8mer-1a | 2506096 | 2506117 | 140 | -19.59 |
| ADediting_529683 | chr16_2506123_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-6849-3p | chr16 | 2506117 | 2506123 | 7mer-m8 | 2506103 | 2506124 | 140 | -16.23 |
| ADediting_529683 | chr16_2506123_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-7160-3p | chr16 | 2506122 | 2507049 | 7mer-m8 | 2506108 | 2507050 | 152 | -26.69 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-1269a | chr16 | 2509543 | 2509549 | 7mer-m8 | 2509527 | 2509550 | 154 | -22.96 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-1269b | chr16 | 2509543 | 2509549 | 7mer-m8 | 2509527 | 2509550 | 146 | -20.41 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-1288-3p | chr16 | 2509542 | 2509549 | 8mer-1a | 2509529 | 2509549 | 144 | -17.71 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-17-3p | chr16 | 2509539 | 2509545 | 7mer-m8 | 2509526 | 2509546 | 148 | -19.14 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-378a-3p | chr16 | 2509544 | 2509550 | 7mer-m8 | 2509531 | 2509551 | 148 | -17.86 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-378b | chr16 | 2509544 | 2509550 | 7mer-m8 | 2509532 | 2509551 | 150 | -18.41 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-378c | chr16 | 2509544 | 2509550 | 7mer-m8 | 2509528 | 2509551 | 148 | -18.72 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-378d | chr16 | 2509544 | 2509550 | 7mer-m8 | 2509533 | 2509551 | 148 | -16.13 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-378e | chr16 | 2509544 | 2509550 | 7mer-m8 | 2509534 | 2509551 | 148 | -18.08 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-378f | chr16 | 2509544 | 2509550 | 7mer-m8 | 2509528 | 2509551 | 143 | -17.05 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-378h | chr16 | 2509544 | 2509550 | 7mer-m8 | 2509530 | 2509551 | 150 | -20.19 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-378i | chr16 | 2509544 | 2509550 | 7mer-m8 | 2509532 | 2509551 | 148 | -16.68 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-422a | chr16 | 2509544 | 2509550 | 7mer-m8 | 2509529 | 2509551 | 150 | -20.25 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-4418 | chr16 | 2509540 | 2509546 | 7mer-m8 | 2509529 | 2509547 | 146 | -14.87 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-509-3-5p | chr16 | 2509540 | 2509546 | 7mer-m8 | 2509527 | 2509547 | 161 | -19.67 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-509-5p | chr16 | 2509540 | 2509546 | 7mer-m8 | 2509529 | 2509547 | 148 | -19.21 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_529672 | chr16_2504558_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-20b-3p | chr16 | 2504555 | 2504561 | 7mer-m8 | 2504540 | 2504562 | 153 | -18.04 |
| ADediting_529680 | chr16_2506101_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-5089-5p | chr16 | 2506100 | 2506107 | 8mer-1a | 2506085 | 2506107 | 148 | -14.58 |
| ADediting_529681 | chr16_2506107_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-1264 | chr16 | 2506106 | 2506112 | 7mer-m8 | 2506091 | 2506113 | 140 | -8.45 |
| ADediting_529681 | chr16_2506107_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-6513-5p | chr16 | 2506101 | 2506107 | 7mer-m8 | 2506087 | 2506108 | 151 | -16.66 |
| ADediting_529683 | chr16_2506123_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-24-3p | chr16 | 2506120 | 2507047 | 7mer-m8 | 2506105 | 2507048 | 144 | -16.41 |
| ADediting_529683 | chr16_2506123_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-5088-5p | chr16 | 2506122 | 2507049 | 7mer-m8 | 2506106 | 2507050 | 150 | -25.73 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-378j | chr16 | 2509544 | 2509550 | 7mer-m8 | 2509529 | 2509551 | 143 | -16.15 |
| ADediting_529765 | chr16_2509545_+ | ENSG00000162065.14 | ENST00000636980.1 | TBC1D24-208 | hsa-miR-6516-5p | chr16 | 2509539 | 2509545 | 7mer-m8 | 2509524 | 2509546 | 143 | -14.63 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-5581-3p | chr16 | 2505416 | 2505422 | 7mer-m8 | 2505401 | 2505423 | 162 | -21.46 |
| ADediting_107020 | chr1_37500952_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-5581-3p | chr16 | 2505416 | 2505422 | 7mer-m8 | 2505401 | 2505423 | 162 | -21.46 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-589-3p | chr16 | 2503453 | 2503459 | 7mer-m8 | 2503440 | 2503460 | 146 | -17.19 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-589-3p | chr16 | 2503453 | 2503459 | 7mer-m8 | 2503440 | 2503460 | 146 | -17.19 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-151a-3p | chr16 | 2501147 | 2501153 | 7mer-m8 | 2501131 | 2501154 | 149 | -20.23 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000162065.14 | ENST00000627285.1 | TBC1D24-206 | hsa-miR-151a-3p | chr16 | 2501147 | 2501153 | 7mer-m8 | 2501131 | 2501154 | 149 | -20.23 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-151a-3p | chr16 | 2501147 | 2501153 | 7mer-m8 | 2501131 | 2501154 | 149 | -20.23 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-4477b | chr16 | 2504992 | 2504999 | 8mer-1a | 2504978 | 2504999 | 140 | -10.57 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-4477b | chr16 | 2504992 | 2504999 | 8mer-1a | 2504978 | 2504999 | 140 | -10.57 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-381-3p | chr16 | 2502062 | 2502068 | 7mer-m8 | 2502045 | 2502069 | 148 | -17.8 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000162065.14 | ENST00000627285.1 | TBC1D24-206 | hsa-miR-381-3p | chr16 | 2502062 | 2502068 | 7mer-m8 | 2502045 | 2502069 | 148 | -17.8 |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-381-3p | chr16 | 2502062 | 2502068 | 7mer-m8 | 2502045 | 2502069 | 148 | -17.8 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-556-3p | chr16 | 2504859 | 2504865 | 7mer-m8 | 2504841 | 2504866 | 154 | -13.14 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-556-3p | chr16 | 2504859 | 2504865 | 7mer-m8 | 2504841 | 2504866 | 154 | -13.14 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-641 | chr16 | 2501689 | 2501695 | 7mer-m8 | 2501673 | 2501696 | 150 | -25.7 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-641 | chr16 | 2502075 | 2502081 | 7mer-m8 | 2502060 | 2502082 | 146 | -14.47 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000162065.14 | ENST00000627285.1 | TBC1D24-206 | hsa-miR-641 | chr16 | 2501689 | 2501695 | 7mer-m8 | 2501673 | 2501696 | 150 | -25.7 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000162065.14 | ENST00000627285.1 | TBC1D24-206 | hsa-miR-641 | chr16 | 2502075 | 2502081 | 7mer-m8 | 2502060 | 2502082 | 146 | -14.47 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-641 | chr16 | 2501689 | 2501695 | 7mer-m8 | 2501673 | 2501696 | 150 | -25.7 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-641 | chr16 | 2502075 | 2502081 | 7mer-m8 | 2502060 | 2502082 | 146 | -14.47 |
| ADediting_496066 | chr15_66496985_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-4512 | chr16 | 2502012 | 2502018 | 7mer-m8 | 2501999 | 2502019 | 141 | -21.15 |
| ADediting_496066 | chr15_66496985_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-4512 | chr16 | 2502781 | 2502787 | 7mer-m8 | 2502767 | 2502788 | 140 | -16.07 |
| ADediting_496066 | chr15_66496985_- | ENSG00000162065.14 | ENST00000627285.1 | TBC1D24-206 | hsa-miR-4512 | chr16 | 2502012 | 2502018 | 7mer-m8 | 2501999 | 2502019 | 141 | -21.15 |
| ADediting_496066 | chr15_66496985_- | ENSG00000162065.14 | ENST00000627285.1 | TBC1D24-206 | hsa-miR-4512 | chr16 | 2502781 | 2502787 | 7mer-m8 | 2502767 | 2502788 | 140 | -16.07 |
| ADediting_496066 | chr15_66496985_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-4512 | chr16 | 2502012 | 2502018 | 7mer-m8 | 2501999 | 2502019 | 141 | -21.15 |
| ADediting_496066 | chr15_66496985_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-4512 | chr16 | 2502781 | 2502787 | 7mer-m8 | 2502767 | 2502788 | 140 | -16.07 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-4775 | chr16 | 2503999 | 2504005 | 7mer-m8 | 2503985 | 2504006 | 151 | -14.56 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-4775 | chr16 | 2505183 | 2505189 | 7mer-m8 | 2505169 | 2505190 | 145 | -9.43 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-4775 | chr16 | 2503999 | 2504005 | 7mer-m8 | 2503985 | 2504006 | 151 | -14.56 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-4775 | chr16 | 2505183 | 2505189 | 7mer-m8 | 2505169 | 2505190 | 145 | -9.43 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-5581-3p | chr16 | 2502065 | 2502071 | 7mer-m8 | 2502051 | 2502072 | 140 | -10.98 |
| ADediting_107020 | chr1_37500952_- | ENSG00000162065.14 | ENST00000627285.1 | TBC1D24-206 | hsa-miR-5581-3p | chr16 | 2502065 | 2502071 | 7mer-m8 | 2502051 | 2502072 | 140 | -10.98 |
| ADediting_107020 | chr1_37500952_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-5581-3p | chr16 | 2502065 | 2502071 | 7mer-m8 | 2502051 | 2502072 | 140 | -10.98 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-589-3p | chr16 | 2502356 | 2502362 | 7mer-m8 | 2502343 | 2502363 | 146 | -18.84 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000162065.14 | ENST00000627285.1 | TBC1D24-206 | hsa-miR-589-3p | chr16 | 2502356 | 2502362 | 7mer-m8 | 2502343 | 2502363 | 146 | -18.84 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-589-3p | chr16 | 2502356 | 2502362 | 7mer-m8 | 2502343 | 2502363 | 146 | -18.84 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-589-5p | chr16 | 2505052 | 2505058 | 7mer-m8 | 2505038 | 2505059 | 149 | -18.11 |
| ADediting_1337758 | chr7_5495892_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-589-5p | chr16 | 2505052 | 2505058 | 7mer-m8 | 2505038 | 2505059 | 149 | -18.11 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-641 | chr16 | 2505072 | 2505078 | 7mer-m8 | 2505053 | 2505079 | 151 | -14.1 |
| ADediting_1556067 | chr19_40282625_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-641 | chr16 | 2505072 | 2505078 | 7mer-m8 | 2505053 | 2505079 | 151 | -14.1 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-641 | chr16 | 2505072 | 2505078 | 7mer-m8 | 2505053 | 2505079 | 151 | -14.1 |
| ADediting_1631458 | chr19_40282624_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-641 | chr16 | 2505072 | 2505078 | 7mer-m8 | 2505053 | 2505079 | 151 | -14.1 |
| ADediting_496066 | chr15_66496985_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-4512 | chr16 | 2501769 | 2501775 | 7mer-m8 | 2501755 | 2501776 | 148 | -20.89 |
| ADediting_496066 | chr15_66496985_- | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-4512 | chr16 | 2502802 | 2502808 | 7mer-m8 | 2502788 | 2502809 | 154 | -19.69 |
| ADediting_496066 | chr15_66496985_- | ENSG00000162065.14 | ENST00000627285.1 | TBC1D24-206 | hsa-miR-4512 | chr16 | 2501769 | 2501775 | 7mer-m8 | 2501755 | 2501776 | 148 | -20.89 |
| ADediting_496066 | chr15_66496985_- | ENSG00000162065.14 | ENST00000627285.1 | TBC1D24-206 | hsa-miR-4512 | chr16 | 2502802 | 2502808 | 7mer-m8 | 2502788 | 2502809 | 154 | -19.69 |
| ADediting_496066 | chr15_66496985_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-4512 | chr16 | 2501769 | 2501775 | 7mer-m8 | 2501755 | 2501776 | 148 | -20.89 |
| ADediting_496066 | chr15_66496985_- | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-4512 | chr16 | 2502802 | 2502808 | 7mer-m8 | 2502788 | 2502809 | 154 | -19.69 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000162065.14 | ENST00000567020.6 | TBC1D24-204 | hsa-miR-4775 | chr16 | 2503434 | 2503440 | 7mer-m8 | 2503420 | 2503441 | 151 | -8.29 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000162065.14 | ENST00000627285.1 | TBC1D24-206 | hsa-miR-4775 | chr16 | 2503434 | 2503440 | 7mer-m8 | 2503420 | 2503441 | 151 | -8.29 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000162065.14 | ENST00000646147.1 | TBC1D24-210 | hsa-miR-4775 | chr16 | 2503434 | 2503440 | 7mer-m8 | 2503420 | 2503441 | 151 | -8.29 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for TBC1D24 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000567020.6 | protein_coding |  |  |
| ENST00000646147.1 | protein_coding |  |  |
| ENST00000636980.1 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_529672 | ENST00000567020.6 | chr16_2504558_+ | 5497 | -2600.40 | -2598.30 | -2602.70 |
| ADediting_529673 | ENST00000567020.6 | chr16_2504976_+ | 5915 | -2600.60 | -2598.30 | -2602.70 |
| ADediting_529672 | ENST00000646147.1 | chr16_2504558_+ | 5439 | -2546.00 | -2543.90 | -2548.30 |
| ADediting_529673 | ENST00000646147.1 | chr16_2504976_+ | 5857 | -2546.20 | -2543.90 | -2548.30 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_529672 | ENST00000636980.1 | chr16_2504558_+ | 25 | -1564.00 | -1563.20 | -1583.50 |
| ADediting_529673 | ENST00000636980.1 | chr16_2504976_+ | 443 | -1565.50 | -1563.20 | -1583.50 |
| ADediting_529679 | ENST00000636980.1 | chr16_2506100_+ | 1567 | -1562.90 | -1563.20 | -1583.50 |
| ADediting_529680 | ENST00000636980.1 | chr16_2506101_+ | 1568 | -1569.40 | -1563.20 | -1583.50 |
| ADediting_529681 | ENST00000636980.1 | chr16_2506107_+ | 1574 | -1567.20 | -1563.20 | -1583.50 |
| ADediting_529682 | ENST00000636980.1 | chr16_2506114_+ | 1581 | -1566.50 | -1563.20 | -1583.50 |
| ADediting_529683 | ENST00000636980.1 | chr16_2506123_+ | 1590 | -1564.30 | -1563.20 | -1583.50 |
| ADediting_1541636 | ENST00000636980.1 | chr16_2508444_+ | 2990 | -1566.50 | -1563.20 | -1583.50 |
| ADediting_1541637 | ENST00000636980.1 | chr16_2508473_+ | 3019 | -1563.30 | -1563.20 | -1583.50 |
| ADediting_529765 | ENST00000636980.1 | chr16_2509545_+ | 4091 | -1565.80 | -1563.20 | -1583.50 |
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Relation with ADAR for TBC1D24 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_529550 | chr16_2477371_+ | 0.195736573593521 | 0.0736802985004316 | 0.230489766100898 | -0.0683005631825279 | 2.85165960602654e-21 | 0.502858852138212 |
| DLPFC | ADediting_529565 | chr16_2477480_+ | 0.899460510361624 | 0.00720480626467097 | 0.148495840330457 | -0.0822559830388831 | 1.06866627037205e-11 | 0.373489656509014 |
| CER | ADediting_529579 | chr16_2478996_+ | 0.000906979144360134 | 0.26816892388659 | 3.8500811136785e-05 | 0.329420008298676 | 0.0134983873564799 | 0.201317166827698 |
| CER | ADediting_529580 | chr16_2479005_+ | 0.000162037172268412 | 0.303224457851932 | 1.58452316520688e-05 | 0.344481501877966 | 0.0409122924135852 | 0.167148066159072 |
| CER | ADediting_529582 | chr16_2479022_+ | 0.0114266899036567 | 0.206025298319276 | 0.000145723398221318 | 0.305244195534767 | 0.0406606328749521 | 0.167354107953911 |
| CER | ADediting_529588 | chr16_2479102_+ | 0.00350830890953562 | 0.236937312147471 | 4.96194363828654e-05 | 0.324967695632836 | 0.0099901614543494 | 0.209752749400756 |
| CER | ADediting_529595 | chr16_2479166_+ | 0.0292719901564746 | 0.178045123994411 | 0.000716517952020686 | 0.273245165374761 | 9.41070134074727e-05 | 0.313416544390597 |
| CER | ADediting_529610 | chr16_2480383_+ | 0.0309310734010684 | 0.176288954018106 | 0.00542836947299595 | 0.225968998322998 | 3.78369867486547e-06 | 0.367256781479022 |
| CER | ADediting_529616 | chr16_2481295_+ | 0.0714335844986587 | 0.147618176379722 | 0.000113739487904917 | 0.30990454670978 | 0.0771778717517357 | 0.14474944834772 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.84257925458078e-62 | 0.770826949342256 | 2.27776038910624e-49 | 0.712783120525971 | 2.70363526338886e-14 | 0.414401779428662 |
| AC | 5.14067369630021e-43 | 0.730799268512346 | 1.87888129624461e-32 | 0.658458269199702 | 7.92615795318085e-10 | 0.376240687820071 |
| PCC | 3.12249327393761e-48 | 0.82266597862896 | 6.75474187289394e-34 | 0.736330311933108 | 0.000284417283208234 | 0.259774688243935 |
| CER | 6.31159874240609e-14 | 0.563148622819973 | 1.21448491536376e-27 | 0.743460718109781 | 0.00189156470447012 | 0.251674504730637 |
| TCX | 2.85918662196246e-21 | 0.674795747265665 | 2.82302245088967e-34 | 0.797379269662333 | 0.00173113943561419 | -0.253720075664312 |
| FP | 5.76843275933025e-24 | 0.663689669170789 | 2.54429526294918e-11 | 0.473236405308407 | 2.38970292366204e-06 | 0.345086855251905 |
| IFG | 6.51067751964724e-07 | 0.816318546239222 | 4.73637432529013e-06 | 0.777825807292001 | 0.549028840976656 | 0.125806285074733 |
| PG | 2.28712181778782e-14 | 0.521577754430657 | 2.46568795096355e-16 | 0.553700777314802 | 0.616535084635822 | 0.0369545970760938 |
| STG | 3.10952956983128e-24 | 0.847173422782012 | 1.59846804332514e-13 | 0.697971353329506 | 0.608065878744764 | 0.0567603664258601 |
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Relation with AD stages for TBC1D24 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_529579 | chr16_2478996_+ | 0.00143287429814435 | 0.303039588847219 |
| CER | ADediting_529580 | chr16_2479005_+ | 0.000630688778801906 | 0.323764906556193 |
| TCX | ADediting_529550 | chr16_2477371_+ | 0.00121056581032636 | 0.31022974161537 |
| TCX | ADediting_529579 | chr16_2478996_+ | 0.00166952694514422 | 0.301749503154754 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 2.54692236063197e-05 | 0.393289330838394 |
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RelatedDrugs for TBC1D24 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TBC1D24 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| TBC1D24 | C0452138 | Sensorineural hearing loss, bilateral | 2 | CLINGEN |
| TBC1D24 | C0917800 | Epilepsy, Myoclonic, Infantile | 2 | ORPHANET;UNIPROT |
| TBC1D24 | C1852282 | DEAFNESS, AUTOSOMAL DOMINANT 1 (disorder) | 2 | CLINGEN |
| TBC1D24 | C3809173 | EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 16 | 2 | UNIPROT |
| TBC1D24 | C3892048 | DEAFNESS, AUTOSOMAL DOMINANT 65 | 2 | CTD_human;UNIPROT |
| TBC1D24 | C0751776 | Atypical Inclusion-Body Disease | 1 | CTD_human |
| TBC1D24 | C0751777 | Familial Progressive Myoclonic Epilepsy | 1 | CTD_human |
| TBC1D24 | C0751778 | Myoclonic Epilepsies, Progressive | 1 | CTD_human |
| TBC1D24 | C0751779 | Action Myoclonus-Renal Failure Syndrome | 1 | CTD_human |
| TBC1D24 | C0751780 | Biotin-Responsive Encephalopathy | 1 | CTD_human |
| TBC1D24 | C0751781 | Dentatorubral-Pallidoluysian Atrophy | 1 | CTD_human |
| TBC1D24 | C0751782 | May-White Syndrome | 1 | CTD_human |
| TBC1D24 | C0795934 | Digitorenocerebral Syndrome | 1 | UNIPROT |
| TBC1D24 | C2829265 | DEAFNESS, AUTOSOMAL RECESSIVE 86 | 1 | CTD_human;UNIPROT |
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