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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for STRIP2 |
 Gene summary |
| Gene information | Gene symbol | STRIP2 | Gene ID | 57464 |
| Gene name | striatin interacting protein 2 | |
| Synonyms | FAM40B|FAR11B | |
| Cytomap | 7q32.1 | |
| Type of gene | protein-coding | |
| Description | striatin-interacting protein 2FAR11 factor arrest 11 homolog Bfamily with sequence similarity 40, member Bhomolog of yeast FAR11 protein 2protein FAM40B | |
| Modification date | 20200313 | |
| UniProtAcc | Q9ULQ0, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for STRIP2 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_1303197(129437180, +), ADediting_1303198(129437357, +), ADediting_1303199(129437423, +), ADediting_1303200(129437945, +), ADediting_1303201(129441589, +), ADediting_1303202(129441638, +), ADediting_1303203(129441661, +), ADediting_1303204(129441673, +), ADediting_1303205(129441802, +), ADediting_1303206(129441807, +), ADediting_1303207(129441876, +), ADediting_1303208(129441878, +), ADediting_1303209(129441890, +), ADediting_1303210(129441958, +), ADediting_1303211(129441972, +), ADediting_1303212(129441973, +), ADediting_1303213(129441981, +), ADediting_1303214(129441996, +), ADediting_1303215(129442029, +), ADediting_1303216(129442127, +), ADediting_1303217(129442174, +), ADediting_1303218(129442175, +), ADediting_1303219(129442208, +), ADediting_1303220(129443084, +), ADediting_1303221(129443102, +), ADediting_1303222(129443110, +), ADediting_1303223(129443118, +), ADediting_1303224(129443119, +), ADediting_1303225(129443120, +), ADediting_1303226(129443135, +), ADediting_1303227(129443141, +), ADediting_1303228(129443142, +), ADediting_1303229(129443157, +), ADediting_1303230(129443173, +), ADediting_1303231(129443179, +), ADediting_1303232(129443292, +), ADediting_1303233(129474274, +), ADediting_1303234(129478445, +), ADediting_1303235(129479073, +), ADediting_1303236(129479074, +), ADediting_1303237(129479085, +), ADediting_1303238(129479113, +), ADediting_1303239(129479151, +), ADediting_1303240(129479153, +), ADediting_1303241(129479167, +), ADediting_1303242(129479180, +), ADediting_1303243(129479186, +), ADediting_1303244(129479194, +), ADediting_1303245(129479258, +), ADediting_1303246(129479590, +), ADediting_1303247(129479607, +), ADediting_1303248(129479702, +), ADediting_1303249(129479713, +), ADediting_1303250(129479760, +), ADediting_1303251(129481230, +), ADediting_1303252(129482073, +), ADediting_1303253(129487036, +), ADediting_1303254(129487058, +), ADediting_1303255(129487069, +), ADediting_1303256(129487070, +), ADediting_1303257(129487075, +), ADediting_1303258(129487094, +), ADediting_1303259(129487153, +), ADediting_1303260(129487195, +), ADediting_1303261(129487201, +), ADediting_1303262(129487204, +), ADediting_1303263(129487220, +), ADediting_1303264(129488024, +), ADediting_1303265(129488107, +), ADediting_1303266(129488121, +), ADediting_1303267(129488131, +), ADediting_1303268(129488146, +), ADediting_1303269(129488148, +), ADediting_1303270(129488149, +), ADediting_1303271(129488151, +), ADediting_1303272(129488152, +), ADediting_1585875(129487143, +), |
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RNA editing positional annotations for STRIP2 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1303197 | chr7_129437180_+ | intronic |
| ADediting_1303198 | chr7_129437357_+ | intronic |
| ADediting_1303199 | chr7_129437423_+ | intronic |
| ADediting_1303200 | chr7_129437945_+ | intronic |
| ADediting_1303201 | chr7_129441589_+ | intronic |
| ADediting_1303202 | chr7_129441638_+ | intronic |
| ADediting_1303203 | chr7_129441661_+ | intronic |
| ADediting_1303204 | chr7_129441673_+ | intronic |
| ADediting_1303205 | chr7_129441802_+ | intronic |
| ADediting_1303206 | chr7_129441807_+ | intronic |
| ADediting_1303207 | chr7_129441876_+ | intronic |
| ADediting_1303208 | chr7_129441878_+ | intronic |
| ADediting_1303209 | chr7_129441890_+ | intronic |
| ADediting_1303210 | chr7_129441958_+ | intronic |
| ADediting_1303211 | chr7_129441972_+ | intronic |
| ADediting_1303212 | chr7_129441973_+ | intronic |
| ADediting_1303213 | chr7_129441981_+ | intronic |
| ADediting_1303214 | chr7_129441996_+ | intronic |
| ADediting_1303215 | chr7_129442029_+ | intronic |
| ADediting_1303216 | chr7_129442127_+ | intronic |
| ADediting_1303217 | chr7_129442174_+ | intronic |
| ADediting_1303218 | chr7_129442175_+ | intronic |
| ADediting_1303219 | chr7_129442208_+ | intronic |
| ADediting_1303220 | chr7_129443084_+ | intronic |
| ADediting_1303221 | chr7_129443102_+ | intronic |
| ADediting_1303222 | chr7_129443110_+ | intronic |
| ADediting_1303223 | chr7_129443118_+ | intronic |
| ADediting_1303224 | chr7_129443119_+ | intronic |
| ADediting_1303225 | chr7_129443120_+ | intronic |
| ADediting_1303226 | chr7_129443135_+ | intronic |
| ADediting_1303227 | chr7_129443141_+ | intronic |
| ADediting_1303228 | chr7_129443142_+ | intronic |
| ADediting_1303229 | chr7_129443157_+ | intronic |
| ADediting_1303230 | chr7_129443173_+ | intronic |
| ADediting_1303231 | chr7_129443179_+ | intronic |
| ADediting_1303232 | chr7_129443292_+ | intronic |
| ADediting_1303233 | chr7_129474274_+ | intronic |
| ADediting_1303234 | chr7_129478445_+ | intronic |
| ADediting_1303235 | chr7_129479073_+ | intronic |
| ADediting_1303236 | chr7_129479074_+ | intronic |
| ADediting_1303237 | chr7_129479085_+ | intronic |
| ADediting_1303238 | chr7_129479113_+ | intronic |
| ADediting_1303239 | chr7_129479151_+ | intronic |
| ADediting_1303240 | chr7_129479153_+ | intronic |
| ADediting_1303241 | chr7_129479167_+ | intronic |
| ADediting_1303242 | chr7_129479180_+ | intronic |
| ADediting_1303243 | chr7_129479186_+ | intronic |
| ADediting_1303244 | chr7_129479194_+ | intronic |
| ADediting_1303245 | chr7_129479258_+ | intronic |
| ADediting_1303246 | chr7_129479590_+ | intronic |
| ADediting_1303247 | chr7_129479607_+ | intronic |
| ADediting_1303248 | chr7_129479702_+ | intronic |
| ADediting_1303249 | chr7_129479713_+ | intronic |
| ADediting_1303250 | chr7_129479760_+ | intronic |
| ADediting_1303251 | chr7_129481230_+ | intronic |
| ADediting_1303252 | chr7_129482073_+ | intronic |
| ADediting_1303253 | chr7_129487036_+ | UTR3 |
| ADediting_1303254 | chr7_129487058_+ | UTR3 |
| ADediting_1303255 | chr7_129487069_+ | UTR3 |
| ADediting_1303256 | chr7_129487070_+ | UTR3 |
| ADediting_1303257 | chr7_129487075_+ | UTR3 |
| ADediting_1303258 | chr7_129487094_+ | UTR3 |
| ADediting_1303259 | chr7_129487153_+ | UTR3 |
| ADediting_1303260 | chr7_129487195_+ | UTR3 |
| ADediting_1303261 | chr7_129487201_+ | UTR3 |
| ADediting_1303262 | chr7_129487204_+ | UTR3 |
| ADediting_1303263 | chr7_129487220_+ | UTR3 |
| ADediting_1303264 | chr7_129488024_+ | UTR3 |
| ADediting_1303265 | chr7_129488107_+ | UTR3 |
| ADediting_1303266 | chr7_129488121_+ | UTR3 |
| ADediting_1303267 | chr7_129488131_+ | UTR3 |
| ADediting_1303268 | chr7_129488146_+ | UTR3 |
| ADediting_1303269 | chr7_129488148_+ | UTR3 |
| ADediting_1303270 | chr7_129488149_+ | UTR3 |
| ADediting_1303271 | chr7_129488151_+ | UTR3 |
| ADediting_1303272 | chr7_129488152_+ | UTR3 |
| ADediting_1585875 | chr7_129487143_+ | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1303197 | chr7_129437180_+ | SINE | Alu | Name=AluJr |
| ADediting_1303198 | chr7_129437357_+ | SINE | Alu | Name=AluJr |
| ADediting_1303199 | chr7_129437423_+ | SINE | Alu | Name=AluJr |
| ADediting_1303200 | chr7_129437945_+ | SINE | Alu | Name=AluY |
| ADediting_1303201 | chr7_129441589_+ | SINE | Alu | Name=AluJb |
| ADediting_1303202 | chr7_129441638_+ | SINE | Alu | Name=AluJb |
| ADediting_1303203 | chr7_129441661_+ | SINE | Alu | Name=AluJb |
| ADediting_1303204 | chr7_129441673_+ | SINE | Alu | Name=AluJb |
| ADediting_1303205 | chr7_129441802_+ | SINE | Alu | Name=AluJb |
| ADediting_1303206 | chr7_129441807_+ | SINE | Alu | Name=AluJb |
| ADediting_1303207 | chr7_129441876_+ | SINE | Alu | Name=AluJb |
| ADediting_1303208 | chr7_129441878_+ | SINE | Alu | Name=AluJb |
| ADediting_1303209 | chr7_129441890_+ | SINE | Alu | Name=AluJb |
| ADediting_1303210 | chr7_129441958_+ | SINE | Alu | Name=AluSx |
| ADediting_1303211 | chr7_129441972_+ | SINE | Alu | Name=AluSx |
| ADediting_1303212 | chr7_129441973_+ | SINE | Alu | Name=AluSx |
| ADediting_1303213 | chr7_129441981_+ | SINE | Alu | Name=AluSx |
| ADediting_1303214 | chr7_129441996_+ | SINE | Alu | Name=AluSx |
| ADediting_1303215 | chr7_129442029_+ | SINE | Alu | Name=AluSx |
| ADediting_1303216 | chr7_129442127_+ | SINE | Alu | Name=AluSx |
| ADediting_1303217 | chr7_129442174_+ | SINE | Alu | Name=AluSx |
| ADediting_1303218 | chr7_129442175_+ | SINE | Alu | Name=AluSx |
| ADediting_1303219 | chr7_129442208_+ | SINE | Alu | Name=AluSx |
| ADediting_1303220 | chr7_129443084_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303221 | chr7_129443102_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303222 | chr7_129443110_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303223 | chr7_129443118_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303224 | chr7_129443119_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303225 | chr7_129443120_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303226 | chr7_129443135_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303227 | chr7_129443141_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303228 | chr7_129443142_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303229 | chr7_129443157_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303230 | chr7_129443173_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303231 | chr7_129443179_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303232 | chr7_129443292_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1303233 | chr7_129474274_+ | SINE | Alu | Name=AluJb |
| ADediting_1303234 | chr7_129478445_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1303235 | chr7_129479073_+ | SINE | Alu | Name=AluSp |
| ADediting_1303236 | chr7_129479074_+ | SINE | Alu | Name=AluSp |
| ADediting_1303237 | chr7_129479085_+ | SINE | Alu | Name=AluSp |
| ADediting_1303238 | chr7_129479113_+ | SINE | Alu | Name=AluSp |
| ADediting_1303239 | chr7_129479151_+ | SINE | Alu | Name=AluSp |
| ADediting_1303240 | chr7_129479153_+ | SINE | Alu | Name=AluSp |
| ADediting_1303241 | chr7_129479167_+ | SINE | Alu | Name=AluSp |
| ADediting_1303242 | chr7_129479180_+ | SINE | Alu | Name=AluSp |
| ADediting_1303243 | chr7_129479186_+ | SINE | Alu | Name=AluSp |
| ADediting_1303244 | chr7_129479194_+ | SINE | Alu | Name=AluSp |
| ADediting_1303245 | chr7_129479258_+ | SINE | Alu | Name=AluSp |
| ADediting_1303246 | chr7_129479590_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303247 | chr7_129479607_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303248 | chr7_129479702_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303249 | chr7_129479713_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303250 | chr7_129479760_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303251 | chr7_129481230_+ | SINE | Alu | Name=AluSg |
| ADediting_1303252 | chr7_129482073_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1303253 | chr7_129487036_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303254 | chr7_129487058_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303255 | chr7_129487069_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303256 | chr7_129487070_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303257 | chr7_129487075_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303258 | chr7_129487094_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303259 | chr7_129487153_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303260 | chr7_129487195_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303261 | chr7_129487201_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303262 | chr7_129487204_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303263 | chr7_129487220_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1303265 | chr7_129488107_+ | SINE | Alu | Name=AluSq |
| ADediting_1303266 | chr7_129488121_+ | SINE | Alu | Name=AluSq |
| ADediting_1303267 | chr7_129488131_+ | SINE | Alu | Name=AluSq |
| ADediting_1303268 | chr7_129488146_+ | SINE | Alu | Name=AluSq |
| ADediting_1303269 | chr7_129488148_+ | SINE | Alu | Name=AluSq |
| ADediting_1303270 | chr7_129488149_+ | SINE | Alu | Name=AluSq |
| ADediting_1303271 | chr7_129488151_+ | SINE | Alu | Name=AluSq |
| ADediting_1303272 | chr7_129488152_+ | SINE | Alu | Name=AluSq |
| ADediting_1585875 | chr7_129487143_+ | SINE | Alu | Name=AluSq2 |
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RNA A-to-I editing events in the alternative splicing sites for STRIP2 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for STRIP2 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for STRIP2 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for STRIP2 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1303253 | chr7_129487036_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-340-3p | chr7 | 129487030 | 129487037 | 8mer-1a | 129487016 | 129487037 | 146 | -18.22 |
| ADediting_1303253 | chr7_129487036_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-6827-3p | chr7 | 129487030 | 129487037 | 8mer-1a | 129487017 | 129487037 | 140 | -14.67 |
| ADediting_1303254 | chr7_129487058_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-3187-5p | chr7 | 129487051 | 129487057 | 7mer-m8 | 129487037 | 129487058 | 159 | -29.61 |
| ADediting_1303254 | chr7_129487058_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-5189-5p | chr7 | 129487051 | 129487057 | 7mer-m8 | 129487033 | 129487058 | 150 | -22.93 |
| ADediting_1303254 | chr7_129487058_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-612 | chr7 | 129487051 | 129487057 | 7mer-m8 | 129487033 | 129487058 | 149 | -22.25 |
| ADediting_1303254 | chr7_129487058_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-661 | chr7 | 129487053 | 129487059 | 7mer-m8 | 129487037 | 129487060 | 143 | -21.35 |
| ADediting_1303254 | chr7_129487058_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-6849-3p | chr7 | 129487056 | 129487063 | 8mer-1a | 129487043 | 129487063 | 150 | -17.05 |
| ADediting_1303254 | chr7_129487058_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-6860 | chr7 | 129487051 | 129487057 | 7mer-m8 | 129487039 | 129487058 | 145 | -20.24 |
| ADediting_1303254 | chr7_129487058_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-939-3p | chr7 | 129487052 | 129487058 | 7mer-m8 | 129487039 | 129487059 | 140 | -15.63 |
| ADediting_1303256 | chr7_129487070_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-324-3p | chr7 | 129487066 | 129487072 | 7mer-m8 | 129487049 | 129487073 | 150 | -21.96 |
| ADediting_1303256 | chr7_129487070_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4252 | chr7 | 129487067 | 129487074 | 8mer-1a | 129487054 | 129487074 | 149 | -22.65 |
| ADediting_1303256 | chr7_129487070_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4793-3p | chr7 | 129487063 | 129487069 | 7mer-m8 | 129487048 | 129487070 | 153 | -19.63 |
| ADediting_1303258 | chr7_129487094_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-17-3p | chr7 | 129487087 | 129487093 | 7mer-m8 | 129487073 | 129487094 | 150 | -17.84 |
| ADediting_1303258 | chr7_129487094_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-485-5p | chr7 | 129487091 | 129487097 | 7mer-m8 | 129487078 | 129487098 | 153 | -19.07 |
| ADediting_1303258 | chr7_129487094_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-6884-5p | chr7 | 129487091 | 129487097 | 7mer-m8 | 129487075 | 129487098 | 150 | -23.9 |
| ADediting_1303261 | chr7_129487201_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4421 | chr7 | 129487199 | 129487205 | 7mer-m8 | 129487185 | 129487206 | 154 | -16.19 |
| ADediting_1303261 | chr7_129487201_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4684-5p | chr7 | 129487195 | 129487201 | 7mer-m8 | 129487180 | 129487202 | 159 | -15.66 |
| ADediting_1303261 | chr7_129487201_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-5699-3p | chr7 | 129487199 | 129487205 | 7mer-m8 | 129487185 | 129487206 | 153 | -17.34 |
| ADediting_1303261 | chr7_129487201_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-593-3p | chr7 | 129487197 | 129487203 | 7mer-1a | 129487185 | 129487203 | 140 | -19.02 |
| ADediting_1303261 | chr7_129487201_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-6818-3p | chr7 | 129487197 | 129487203 | 7mer-m8 | 129487183 | 129487204 | 140 | -12.56 |
| ADediting_1303263 | chr7_129487220_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-3190-5p | chr7 | 129487218 | 129487224 | 7mer-m8 | 129487206 | 129487225 | 147 | -18.34 |
| ADediting_1303263 | chr7_129487220_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-548s | chr7 | 129487217 | 129487223 | 7mer-m8 | 129487200 | 129487224 | 143 | -15.64 |
| ADediting_1303264 | chr7_129488024_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4676-5p | chr7 | 129488020 | 129488026 | 7mer-m8 | 129488004 | 129488027 | 150 | -16.87 |
| ADediting_1303264 | chr7_129488024_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-575 | chr7 | 129488020 | 129488026 | 7mer-m8 | 129488008 | 129488027 | 147 | -19.19 |
| ADediting_1303266 | chr7_129488121_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-564 | chr7 | 129488119 | 129488125 | 7mer-1a | 129488107 | 129488125 | 143 | -19.46 |
| ADediting_1303270 | chr7_129488149_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-367-5p | chr7 | 129488142 | 129488148 | 7mer-m8 | 129488127 | 129488149 | 148 | -13.32 |
| ADediting_1303270 | chr7_129488149_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-7152-5p | chr7 | 129488145 | 129488151 | 7mer-m8 | 129488131 | 129488152 | 150 | -14.04 |
| ADediting_1303272 | chr7_129488152_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-6812-3p | chr7 | 129488147 | 129488154 | 8mer-1a | 129488134 | 129488154 | 140 | -18.1 |
| ADediting_1585875 | chr7_129487143_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-6769a-3p | chr7 | 129487139 | 129487145 | 7mer-m8 | 129487126 | 129487146 | 140 | -17.35 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1303253 | chr7_129487036_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-3664-5p | chr7 | 129487033 | 129487039 | 7mer-m8 | 129487019 | 129487040 | 153 | -16.53 |
| ADediting_1303253 | chr7_129487036_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-6888-3p | chr7 | 129487031 | 129487037 | 7mer-m8 | 129487018 | 129487038 | 151 | -14.42 |
| ADediting_1303254 | chr7_129487058_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4453 | chr7 | 129487054 | 129487060 | 7mer-m8 | 129487042 | 129487061 | 150 | -15.12 |
| ADediting_1303254 | chr7_129487058_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4538 | chr7 | 129487054 | 129487060 | 7mer-m8 | 129487040 | 129487061 | 151 | -16.99 |
| ADediting_1303254 | chr7_129487058_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-635 | chr7 | 129487052 | 129487058 | 7mer-m8 | 129487037 | 129487059 | 151 | -18.79 |
| ADediting_1303255 | chr7_129487069_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-25-3p | chr7 | 129487064 | 129487070 | 7mer-m8 | 129487049 | 129487071 | 154 | -18.76 |
| ADediting_1303255 | chr7_129487069_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-32-5p | chr7 | 129487064 | 129487070 | 7mer-m8 | 129487049 | 129487071 | 145 | -12.44 |
| ADediting_1303255 | chr7_129487069_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-363-3p | chr7 | 129487064 | 129487070 | 7mer-m8 | 129487054 | 129487071 | 146 | -12.63 |
| ADediting_1303255 | chr7_129487069_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-7703 | chr7 | 129487062 | 129487069 | 8mer-1a | 129487047 | 129487069 | 154 | -19.44 |
| ADediting_1303255 | chr7_129487069_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-92a-3p | chr7 | 129487064 | 129487070 | 7mer-m8 | 129487054 | 129487071 | 147 | -19.71 |
| ADediting_1303255 | chr7_129487069_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-92b-3p | chr7 | 129487064 | 129487070 | 7mer-m8 | 129487050 | 129487071 | 150 | -18.96 |
| ADediting_1303256 | chr7_129487070_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-25-3p | chr7 | 129487064 | 129487070 | 7mer-m8 | 129487049 | 129487071 | 154 | -18.76 |
| ADediting_1303256 | chr7_129487070_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-32-5p | chr7 | 129487064 | 129487070 | 7mer-m8 | 129487049 | 129487071 | 145 | -12.44 |
| ADediting_1303256 | chr7_129487070_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-363-3p | chr7 | 129487064 | 129487070 | 7mer-m8 | 129487054 | 129487071 | 146 | -12.63 |
| ADediting_1303256 | chr7_129487070_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-92a-3p | chr7 | 129487064 | 129487070 | 7mer-m8 | 129487054 | 129487071 | 147 | -19.71 |
| ADediting_1303256 | chr7_129487070_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-92b-3p | chr7 | 129487064 | 129487070 | 7mer-m8 | 129487050 | 129487071 | 150 | -18.96 |
| ADediting_1303258 | chr7_129487094_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-377-5p | chr7 | 129487091 | 129487097 | 7mer-m8 | 129487075 | 129487098 | 150 | -17.59 |
| ADediting_1303258 | chr7_129487094_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-6086 | chr7 | 129487091 | 129487097 | 7mer-m8 | 129487079 | 129487098 | 150 | -23.99 |
| ADediting_1303258 | chr7_129487094_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-6516-5p | chr7 | 129487087 | 129487093 | 7mer-m8 | 129487069 | 129487094 | 147 | -15.44 |
| ADediting_1303262 | chr7_129487204_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-10a-5p | chr7 | 129487201 | 129487207 | 7mer-m8 | 129487186 | 129487208 | 145 | -12.2 |
| ADediting_1303262 | chr7_129487204_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-10b-5p | chr7 | 129487201 | 129487207 | 7mer-m8 | 129487186 | 129487208 | 140 | -12.2 |
| ADediting_1303262 | chr7_129487204_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-6732-3p | chr7 | 129487202 | 129487208 | 7mer-m8 | 129487188 | 129487209 | 150 | -14.93 |
| ADediting_1303263 | chr7_129487220_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4794 | chr7 | 129487218 | 129487224 | 7mer-m8 | 129487203 | 129487225 | 151 | -18.19 |
| ADediting_1303263 | chr7_129487220_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-664a-5p | chr7 | 129487218 | 129487224 | 7mer-m8 | 129487202 | 129487225 | 141 | -16.24 |
| ADediting_1303264 | chr7_129488024_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-554 | chr7 | 129488018 | 129488024 | 7mer-m8 | 129488005 | 129488025 | 144 | -20.85 |
| ADediting_1303264 | chr7_129488024_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-8086 | chr7 | 129488019 | 129488025 | 7mer-m8 | 129488005 | 129488026 | 148 | -14.74 |
| ADediting_1303265 | chr7_129488107_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4772-3p | chr7 | 129488101 | 129488107 | 7mer-m8 | 129488086 | 129488108 | 151 | -13.75 |
| ADediting_1303268 | chr7_129488146_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-744-3p | chr7 | 129488141 | 129488148 | 8mer-1a | 129488127 | 129488148 | 140 | -10.2 |
| ADediting_1303269 | chr7_129488148_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-744-3p | chr7 | 129488141 | 129488148 | 8mer-1a | 129488127 | 129488148 | 140 | -10.2 |
| ADediting_1585875 | chr7_129487143_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4267 | chr7 | 129487141 | 129487147 | 7mer-m8 | 129487133 | 129487148 | 149 | -19.69 |
| ADediting_1585875 | chr7_129487143_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4448 | chr7 | 129487138 | 129487144 | 7mer-m8 | 129487126 | 129487145 | 150 | -23.08 |
| ADediting_1585875 | chr7_129487143_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-6736-3p | chr7 | 129487140 | 129487146 | 7mer-m8 | 129487127 | 129487147 | 145 | -16.09 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-589-3p | chr7 | 129485881 | 129485887 | 7mer-m8 | 129485865 | 129485888 | 142 | -13.85 |
| ADediting_1337757 | chr7_5495852_- | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-589-3p | chr7 | 129486505 | 129486511 | 7mer-m8 | 129486492 | 129486512 | 148 | -21.55 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-337-3p | chr7 | 129486665 | 129486671 | 7mer-m8 | 129486651 | 129486672 | 152 | -15.37 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_843620 | chr2_207754818_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4775 | chr7 | 129486467 | 129486473 | 7mer-m8 | 129486453 | 129486474 | 146 | -2.56 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000128578.10 | ENST00000249344.7 | STRIP2-201 | hsa-miR-4775 | chr7 | 129486619 | 129486625 | 7mer-m8 | 129486603 | 129486626 | 155 | -12.24 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for STRIP2 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000249344.7 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1303253 | ENST00000249344.7 | chr7_129487036_+ | 3753 | -1663.70 | -1657.50 | -1706.00 |
| ADediting_1303254 | ENST00000249344.7 | chr7_129487058_+ | 3775 | -1664.10 | -1657.50 | -1706.00 |
| ADediting_1303255 | ENST00000249344.7 | chr7_129487069_+ | 3786 | -1656.80 | -1657.50 | -1706.00 |
| ADediting_1303256 | ENST00000249344.7 | chr7_129487070_+ | 3787 | -1663.70 | -1657.50 | -1706.00 |
| ADediting_1303257 | ENST00000249344.7 | chr7_129487075_+ | 3792 | -1657.50 | -1657.50 | -1706.00 |
| ADediting_1303258 | ENST00000249344.7 | chr7_129487094_+ | 3811 | -1657.50 | -1657.50 | -1706.00 |
| ADediting_1585875 | ENST00000249344.7 | chr7_129487143_+ | 3860 | -1663.90 | -1657.50 | -1706.00 |
| ADediting_1303259 | ENST00000249344.7 | chr7_129487153_+ | 3870 | -1660.70 | -1657.50 | -1706.00 |
| ADediting_1303260 | ENST00000249344.7 | chr7_129487195_+ | 3912 | -1661.80 | -1657.50 | -1706.00 |
| ADediting_1303261 | ENST00000249344.7 | chr7_129487201_+ | 3918 | -1657.60 | -1657.50 | -1706.00 |
| ADediting_1303262 | ENST00000249344.7 | chr7_129487204_+ | 3921 | -1657.40 | -1657.50 | -1706.00 |
| ADediting_1303263 | ENST00000249344.7 | chr7_129487220_+ | 3937 | -1657.20 | -1657.50 | -1706.00 |
| ADediting_1303264 | ENST00000249344.7 | chr7_129488024_+ | 4741 | -1664.10 | -1657.50 | -1706.00 |
| ADediting_1303265 | ENST00000249344.7 | chr7_129488107_+ | 4824 | -1656.80 | -1657.50 | -1706.00 |
| ADediting_1303266 | ENST00000249344.7 | chr7_129488121_+ | 4838 | -1663.30 | -1657.50 | -1706.00 |
| ADediting_1303267 | ENST00000249344.7 | chr7_129488131_+ | 4848 | -1657.10 | -1657.50 | -1706.00 |
| ADediting_1303268 | ENST00000249344.7 | chr7_129488146_+ | 4863 | -1657.50 | -1657.50 | -1706.00 |
| ADediting_1303269 | ENST00000249344.7 | chr7_129488148_+ | 4865 | -1657.20 | -1657.50 | -1706.00 |
| ADediting_1303270 | ENST00000249344.7 | chr7_129488149_+ | 4866 | -1657.20 | -1657.50 | -1706.00 |
| ADediting_1303271 | ENST00000249344.7 | chr7_129488151_+ | 4868 | -1656.60 | -1657.50 | -1706.00 |
| ADediting_1303272 | ENST00000249344.7 | chr7_129488152_+ | 4869 | -1664.20 | -1657.50 | -1706.00 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for STRIP2 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1303257 | chr7_129487075_+ | 0.000455512698133301 | 0.282736366806644 | 0.000141309257501699 | 0.30582692741189 | 0.0151751503841815 | 0.1979494176694 |
| CER | ADediting_1303263 | chr7_129487220_+ | 0.000719126127162684 | 0.273167652083698 | 3.84849984219287e-06 | 0.36699671876678 | 0.0245432253515987 | 0.18356335903688 |
| DLPFC | ADediting_1303264 | chr7_129488024_+ | 1.26083451484202e-08 | 0.316190342041088 | 6.9662805124775e-13 | 0.392874875365134 | 0.27704634584559 | -0.0619271251997533 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.17730437404431e-75 | 0.817096064885501 | 1.3363485169696e-85 | 0.844692652882103 | 0.00065362690687292 | 0.192543323833918 |
| AC | 2.80221912284352e-46 | 0.749251684164675 | 2.78054689373911e-63 | 0.824555211876869 | 0.273059446101958 | -0.0695845870913877 |
| PCC | 7.66800329320072e-09 | 0.4027194473292 | 1.7587943841703e-08 | 0.39367720979624 | 0.383730682573814 | 0.0633791034414497 |
| CER | 3.28658197350418e-32 | 0.782132749807928 | 1.63357629016665e-17 | 0.623254374665144 | 0.477267565766918 | 0.0584681985422256 |
| TCX | 1.52198158586793e-18 | 0.638406282201049 | 2.71850808562297e-35 | 0.804431496206002 | 0.00011336007558445 | -0.309966861011974 |
| FP | 7.19048497451884e-22 | 0.639677220959265 | 1.86332276498057e-32 | 0.742556818195996 | 0.279512593121054 | 0.081494722262087 |
| PG | 4.27985025530469e-18 | 0.579787082598033 | 7.49375233198521e-20 | 0.603686705797166 | 0.0292383979594799 | -0.159912034174063 |
| STG | 0.00011545603790405 | 0.40830611051483 | 2.85260672430032e-07 | 0.525531190548741 | 0.783281112989797 | -0.0304593847490763 |
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Relation with AD stages for STRIP2 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| IFG | ADediting_1303264 | chr7_129488024_+ | 0.0354713369979928 | 0.422303326441651 |
| IFG | ADediting_1303272 | chr7_129488152_+ | 0.0113059937049014 | 0.497952103823781 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 0.00143835245030023 | 0.302939659111832 |
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RelatedDrugs for STRIP2 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for STRIP2 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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